RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNRK (Homo sapiens)

Ensembl gene IDs: ENSG00000163788

Ensembl transcript IDs: ENST00000296088.12, ENST00000429705.6, ENST00000437827.1, ENST00000454177.5, ENST00000462810.1, ENST00000468628.2, ENST00000481892.1, ENST00000484791.1

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTTCTCAGTGCAGACACTCACTGTCCTCTGCTCTGCACGGGCCATaGACAGCTGGGCGGCACAAGGTCGCTAGCTGGCTCCAGGCCTGT +
Preference number: 1 (lower is better)
Translates to: GSQCRHSLSSALHGP*TAGRHKVASWLQAC
Trigger: ACAGGCCTGGAGCCAGCTAGCGACCTTGTGCCGCCCAGCTGTCCATGGCCCGTGCAGAGCAGAGGACAGTGAGTGTCTGCACTGAGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 90 bp GCTCTGCACGGGCCATGGACAGCTGGGCGGCACAAGGTCGCTAGCTaGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTG +
Preference number: 1 (lower is better)
Translates to: ALHGPWTAGRHKVAS*LQACGHHNVIALVL
Trigger: CAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAGCTAGCGACCTTGTGCCGCCCAGCTGTCCATGGCCCGTGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR TCA 90 bp ACAGTGACCACAGCAATGCAGTTCTTTGGTGATGTGCCCACTCTCTaGATTACAGGACCAGATGCGTCTCAGTCCGTCACCTCAGACACA +
Preference number: 1 (lower is better)
Translates to: TVTTAMQFFGDVPTL*ITGPDASQSVTSDT
Trigger: TGTGTCTGAGGTGACGGACTGAGACGCATCTGGTCCTGTAATTCAGAGAGTGGGCACATCACCAAAGAACTGCATTGCTGTGGTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 90 bp TTGTGTGCACCTTCTGTACTAGGCCCTATAGTTCTTCTATCTACATaGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGC +
Preference number: 1 (lower is better)
Translates to: LCAPSVLGPIVLLST*KSCSVPYRKEFTQS
Trigger: GCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCCTAGTACAGAAGGTGCACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR GCA 90 bp TACATAATAGGCTTTTCGGCTGGGAAAGAAAAGTGTCTAGCAGCATaGACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGA +
Preference number: 1 (lower is better)
Translates to: YIIGFSAGKEKCLAA*TKTMHCHIIRRTNG
Trigger: TCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCAGCCGAAAAGCCTATTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
3UTR GCA 90 bp CCTTCTGTACTAGGCCCTATAGTTCTTCTATCTACATGGAAATCCTaGAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTG +
Preference number: 1 (lower is better)
Translates to: PSVLGPIVLLSTWKS*SVPYRKEFTQSIFL
Trigger: CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCCTAGTACAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR TCA 90 bp CACAATCATTCACTTATAAACAAAGGAGTAAGACACCACTCAGACTaGCATTTGTATACCCCAAGGGTCAACCACACAACTAATAAGGCT +
Preference number: 1 (lower is better)
Translates to: HNHSLINKGVRHHSD*HLYTPRVNHTTNKA
Trigger: AGCCTTATTAGTTGTGTGGTTGACCCTTGGGGTATACAAATGTCAGTCTGAGTGGTGTCTTACTCCTTTGTTTATAAGTGAATGATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 90 bp ACAGATGTTACGCTCACTATCTATGTGAACCACACATCTTATTTCTaGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGT +
Preference number: 1 (lower is better)
Translates to: TDVTLTIYVNHTSYF*PFIRSLLKNFKQIC
Trigger: ACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAGAAATAAGATGTGTGGTTCACATAGATAGTGAGCGTAACATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 90 bp GTCGCTAGCTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTaGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: VASWLQACGHHNVIA*VLSQTPESVSQSLG
Trigger: CCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAGCTAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 90 bp ACAAGGTCGCTAGCTGGCTCCAGGCCTGTGGGCATCACAACGTTATaGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: TRSLAGSRPVGITTL*LWFCLRHQRVCLRA
Trigger: GGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAGCTAGCGACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 90 bp GAGTGGGGAAGGGCCCTGGGTCCCAGCCACATGCTATCACCAATGTaGCTAAGCACTGCTTTTAAGACTCCCAGGGCACTGCATGAAAAA +
Preference number: 2 (lower is better)
Translates to: EWGRALGPSHMLSPM*LSTAFKTPRALHEK
Trigger: TTTTTCATGCAGTGCCCTGGGAGTCTTAAAAGCAGTGCTTAGCAACATTGGTGATAGCATGTGGCTGGGACCCAGGGCCCTTCCCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGCACTGTCCTCTGCTCTaGACGGGCCATGGACAGCTG +
Preference number: 2 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKHCPLL*TGHGQL
Trigger: CAGCTGTCCATGGCCCGTGCAGAGCAGAGGACAGTG...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGACACTCACTGTCCTCTaGTCTGCACGGGCCATGGAC +
Preference number: 2 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKTLTVL*SARAMD
Trigger: GTCCATGGCCCGTGCAGAGCAGAGGACAGTGAGTGT...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCCACAAGGTCGCTAGCTaGCTCCAGGCCTGTGGGCAT +
Preference number: 2 (lower is better)
Translates to: LALYKIPAQEFQANMFYGHKVAS*LQACGH
Trigger: ATGCCCACAGGCCTGGAGCCAGCTAGCGACCTTGTG...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR TCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAATGGAACAGTGAAGTaGGCCGGTCTTCACTGCTCT +
Preference number: 2 (lower is better)
Translates to: SSSMHKDHALSHHQANKWNGTVK*AGLHCS
Trigger: AGAGCAGTGAAGACCGGCTCACTTCACTGTTCCATT...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
3UTR-3UTR TCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGAACCAAATGGAACAGTaGAGTGAGCCGGTCTTCACT +
Preference number: 2 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKNQMEQ*SEPVFT
Trigger: AGTGAAGACCGGCTCACTTCACTGTTCCATTTGGTT...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp CGTTATTGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGCATGCACAAAGACCATaGATTGTCACATCATCAGGC +
Preference number: 2 (lower is better)
Translates to: RYCFGSVSDTRECVSEPRHAQRP*IVTSSG
Trigger: GCCTGATGATGTGACAATGCATGGTCTTTGTGCATG...CCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTGCTCTGCACGGGCCATaGACAGCTGGGCGGCACAAG +
Preference number: 2 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFALHGP*TAGRHK
Trigger: CTTGTGCCGCCCAGCTGTCCATGGCCCGTGCAGAGC...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR TCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAATGGAACAGTGAAGTaGGCCGGTCTTCACTGCTCT +
Preference number: 2 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVNGTVK*AGLHCS
Trigger: AGAGCAGTGAAGACCGGCTCACTTCACTGTTCCATT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
3UTR-3UTR TCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGGAACAGTGAAGTaGGCCGGTCTTCACTGCTCT +
Preference number: 2 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINNGTVK*AGLHCS
Trigger: AGAGCAGTGAAGACCGGCTCACTTCACTGTTCCATT...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
3UTR-3UTR TCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGAACCAAATGGAACAGTaGAGTGAGCCGGTCTTCACT +
Preference number: 2 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMNQMEQ*SEPVFT
Trigger: AGTGAAGACCGGCTCACTTCACTGTTCCATTTGGTT...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR TCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTGATGTGCCCACTCTCTaGATTACAGGACCAGATGCG +
Preference number: 2 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFDVPTL*ITGPDA
Trigger: CGCATCTGGTCCTGTAATTCAGAGAGTGGGCACATC...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCACTACAGGGGAAGCTaGCTTATAAATCTAAGTACT +
Preference number: 2 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLHYRGS*LINLST
Trigger: AGTACTTAGATTTATAAGGCAGCTTCCCCTGTAGTG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGCATGCACAAAGACCATaGATTGTCACATCATCAGGC +
Preference number: 2 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMHAQRP*IVTSSG
Trigger: GCCTGATGATGTGACAATGCATGGTCTTTGTGCATG...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCAAGTGTCTAGCAGCATaGACAAAGACCATGCATTGT +
Preference number: 2 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVKCLAA*TKTMHC
Trigger: ACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR GCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTTTGCCAACATTTGTGTaGACCTTCTGTACTAGGCCC +
Preference number: 2 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFLPTFV*TFCTRP
Trigger: GGGCCTAGTACAGAAGGTGCACACAAATGTTGGCAA...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 90 bp GACAGGTTAAGGGGTACAAGTAACTGTTTAGAGCAAGTAAGTAGTTaGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: DRLRGTSNCLEQVSS*VQYYLNVMVFRSLP
Trigger: AGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACTTACTTGCTCTAAACAGTTACTTGTACCCCTTAACCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR TCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTCTGCTGATCCTAAAGTaGGCACCATATATACATCTG +
Preference number: 2 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFLLILK*APYIHL
Trigger: CAGATGTATATATGGTGCTCACTTTAGGATCAGCAG...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR TCA 72 bp GGACCAGATGCGTCTCAGTCCGTCACCTCAGACACATaGCTCGGGGCTGAAGAGTGGGGAAGGGCCCTGGGT +
Preference number: 3 (lower is better)
Translates to: GPDASQSVTSDT*LGAEEWGRALG
Trigger: ACCCAGGGCCCTTCCCCACTCTTCAGCCCCGAGTCATGTGTCTGAGGTGACGGACTGAGACGCATCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 72 bp GGGCCATGGACAGCTGGGCGGCACAAGGTCGCTAGCTaGCTCCAGGCCTGTGGGCATCACAACGTTATTGCT +
Preference number: 3 (lower is better)
Translates to: GPWTAGRHKVAS*LQACGHHNVIA
Trigger: AGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAGCTAGCGACCTTGTGCCGCCCAGCTGTCCATGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 72 bp GGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTaGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGA +
Preference number: 3 (lower is better)
Translates to: GSRPVGITTLLL*FCLRHQRVCLR
Trigger: TCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACACAAAGACCATGCATaGTCACATCATCAGGCGAAC +
Preference number: 3 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSHKDHA*SHHQAN
Trigger: GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTG...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR TCA 72 bp CACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTaGGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGC +
Preference number: 3 (lower is better)
Translates to: HFKIVKPNGTVK*AGLHCSEQEAC
Trigger: GCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTCACTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
3UTR GCA 72 bp CTAGGCCCTATAGTTCTTCTATCTACATGGAAATCCTaGAGTGTGCCCTACAGGAAGGAATTTACACAGAGC +
Preference number: 3 (lower is better)
Translates to: LGPIVLLSTWKS*SVPYRKEFTQS
Trigger: GCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CAA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCACAACGTTATTGCTTaGGTTCTGTCTCAGACACCA +
Preference number: 3 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLHNVIA*VLSQTP
Trigger: TGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 72 bp CCTTCTGTACTAGGCCCTATAGTTCTTCTATCTACATaGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTT +
Preference number: 3 (lower is better)
Translates to: PSVLGPIVLLST*KSCSVPYRKEF
Trigger: AAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCCTAGTACAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR TCA 72 bp TCACTTATAAACAAAGGAGTAAGACACCACTCAGACTaGCATTTGTATACCCCAAGGGTCAACCACACAACT +
Preference number: 3 (lower is better)
Translates to: SLINKGVRHHSD*HLYTPRVNHTT
Trigger: AGTTGTGTGGTTGACCCTTGGGGTATACAAATGTCAGTCTGAGTGGTGTCTTACTCCTTTGTTTATAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CAA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCGTTACGAAGCAGGCTTaGTGCATTTTTGTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: LALYKIPAQEFQANMFYGVTKQA*CIFVCC
Trigger: ACAGCAAACAAAAATGCACAAAGCCTGCTTCGTAAC...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CAA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTCACAAAGACCATGCATaGTCACATCATCAGGCGAAC +
Preference number: 3 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFHKDHA*SHHQAN
Trigger: GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTG...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR GCA 72 bp TTAATTCATGGGGTTTTGACTTTGCCAACATTTGTGTaGACCTTCTGTACTAGGCCCTATAGTTCTTCTATC +
Preference number: 3 (lower is better)
Translates to: LIHGVLTLPTFV*TFCTRPYSSSI
Trigger: GATAGAAGAACTATAGGGCCTAGTACAGAAGGTGCACACAAATGTTGGCAAAGTCAAAACCCCATGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 72 bp ACGCTCACTATCTATGTGAACCACACATCTTATTTCTaGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAG +
Preference number: 3 (lower is better)
Translates to: TLTIYVNHTSYF*PFIRSLLKNFK
Trigger: CTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAGAAATAAGATGTGTGGTTCACATAGATAGTGAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR TCA 72 bp TATATTTATCCTAAAGTAGCAGAGTCAGTGTGTACTTaGAGAAACAGTGACCACAGCAATGCAGTTCTTTGG +
Preference number: 3 (lower is better)
Translates to: YIYPKVAESVCT*RNSDHSNAVLW
Trigger: CCAAAGAACTGCATTGCTGTGGTCACTGTTTCTTCAAGTACACACTGACTCTGCTACTTTAGGATAAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR-3UTR CAA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTGTTACGAAGCAGGCTTaGTGCATTTTTGTTTGCTGT +
Preference number: 3 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFVTKQA*CIFVCC
Trigger: ACAGCAAACAAAAATGCACAAAGCCTGCTTCGTAAC...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR GCA 72 bp CCATTGAAACCAAACACATATGGGTTAGTTAAAAGGTaGCATTCCAAGGCTATACATAATCACAGGAAAAAG +
Preference number: 3 (lower is better)
Translates to: PLKPNTYGLVKR*HSKAIHNHRKK
Trigger: CTTTTTCCTGTGATTATGTATAGCCTTGGAATGGCACCTTTTAACTAACCCATATGTGTTTGGTTTCAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CCA 72 bp GTCAATGTTTACACAATGAGGGAAATCAACCAGCATTaGAAGCAACTGACCAAATCAGTTGATAATTCTGTA +
Preference number: 3 (lower is better)
Translates to: VNVYTMREINQH*KQLTKSVDNSV
Trigger: TACAGAATTATCAACTGATTTGGTCAGTTGCTTCCAATGCTGGTTGATTTCCCTCATTGTGTAAACATTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR GCA 72 bp GATTGTCTGCTTGTAATTTATCACTACAGGGGAAGCTaGCTTATAAATCTAAGTACTTTATCTCACCTATTA +
Preference number: 3 (lower is better)
Translates to: DCLLVIYHYRGS*LINLSTLSHLL
Trigger: TAATAGGTGAGATAAAGTACTTAGATTTATAAGGCAGCTTCCCCTGTAGTGATAAATTACAAGCAGACAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCACAGGGGGCCCCTCGCTaGTATCCCGTCGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPQGAPR*YPVGAR
Trigger: CCTGGCACCGACGGGATAGCAGCGAGGGGCCCCCTG...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATGCCACCCGAGCCGCTaGAGGGACTGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPCHPSR*RDCPHQ
Trigger: CTGGTGGGGGCAGTCCCTCCAGCGGCTCGGGTGGCA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCACTGCGAGAGGCCAGCTaGATGGAGTTGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPLREAS*MELLGP
Trigger: CGGCCCCAGCAACTCCATGCAGCTGGCCTCTCGCAG...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCACCCACTGCAGGGACCTaGCCTGCATTCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPPTAGT*PAFPVE
Trigger: CTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGG...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATCCGCCCACTGGCTGTaGGTTTTAAGCTTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPSAHWL*VLSLRV
Trigger: CACCCGCAAGCTTAAAACCCACAGCCAGTGGGCGGA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAGCGGTTGGTTACAGATaGCTTCCGGCGCAAAACCAC +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPAVGYR*LPAQNH
Trigger: GTGGTTTTGCGCCGGAAGCCATCTGTAACCAACCGC...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCACACAGTCAGATGACATaGCAACAGCTGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPHSQMT*QQLAGL
Trigger: CAGCCCAGCCAGCTGTTGCCATGTCATCTGACTGTG...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAGCCCACACACCAACATaGAAAGGATCACTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPAHTPT*KGSLPD
Trigger: GTCTGGGAGTGATCCTTTTCATGTTGGTGTGTGGGC...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACCTGCGAGAGGCCAGCTaGATGGAGTTGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDLREAS*MELLGP
Trigger: CGGCCCCAGCAACTCCATGCAGCTGGCCTCTCGCAG...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCACAGAGAAAAACTTTATaGCGCCCACTGCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPQRKTL*RPLQGP
Trigger: AGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTG...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAAATTTTGGTTGGCCATaGCTGCCTAAACTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPNFGWP*LPKLGL
Trigger: AAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATT...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACTGGCATTGCTTGGCTTaGTCTGGCCCCCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDWHCLA*SGPRHP
Trigger: GGGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCA...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACGCTGGCTGGGCTGGATaGGCACAGCAGCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHAGWAG*AQQPLL
Trigger: AAGGAGGGGCTGCTGTGCGCATCCAGCCCAGCCAGC...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATTGCCAACATTTGTGTaGACCTTCTGTACTAGGCCC +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPLPTFV*TFCTRP
Trigger: GGGCCTAGTACAGAAGGTGCACACAAATGTTGGCAA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACCGGGTAGCTGCGCCTaGGCGGGCTGCGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTPGSCA*AGCASL
Trigger: CAGTGACGCGCAGCCCGCGCAGGCGCAGCTACCCGG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454177.5
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGAGAGGCCAGCTGCATaGAGTTGCTGGGGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSERPAA*SCWGRH
Trigger: GTGCCGGCCCCAGCAACTCCATGCAGCTGGCCTCTC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAGTTCCAATTCAGTGGTaGTATCTGCCATGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPVPIQW*YLPCGQ
Trigger: CTGACCACATGGCAGATACCACCACTGAATTGGAAC...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAAATGCAGTTCTTTGGTaGTGTGCCCACTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPNAVLW*CAHSLN
Trigger: ATTCAGAGAGTGGGCACATCACCAAAGAACTGCATT...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATTCTGGAGCGGAATATaGAAGAGATCCACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPFWSGI*KRSTAC
Trigger: ACAAGCTGTGGATCTCTTGCATATTCCGCTCCAGAA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACAGGGGGCCCCTCGCTaGTATCCCGTCGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTQGAPR*YPVGAR
Trigger: CCTGGCACCGACGGGATAGCAGCGAGGGGCCCCCTG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACCCACTGCAGGGACCTaGCCTGCATTCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSPTAGT*PAFPVE
Trigger: CTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGG...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATGCCACCCGAGCCGCTaGAGGGACTGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRCHPSR*RDCPHQ
Trigger: CTGGTGGGGGCAGTCCCTCCAGCGGCTCGGGTGGCA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGCCCGAGCAGGAGACTaGGGGACAGTCGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTARAGD*GTVAWD
Trigger: GTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACTGCTCCTGTGGCCATTaGGGACACTGTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHCSCGH*GHCQQP
Trigger: GGGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCA...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGGGGCCACAGTCAGATaGCATGGCAACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSGATVR*HGNSWL
Trigger: CAGCCAGCTGTTGCCATGTCATCTGACTGTGGCCCC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACGTCACCTCAGACACATaGCTCGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDVTSDT*LGAEEW
Trigger: CCACTCTTCAGCCCCGAGTCATGTGTCTGAGGTGAC...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACTGGCACCGTAGAGAGTaGTGGTCCAGCCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDWHRRE*WSSQLR
Trigger: CCTGAGTTGGCTGGACCAGCACTCTCTACGGTGCCA...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATTCAGTGGTGGTATCTaGCATGTGGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPFSGGI*HVVREK
Trigger: TTTTTCTCTGACCACATGGCAGATACCACCACTGAA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACGCTGCATGGAGTTGCTaGGGCCGGCACAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANAAWSC*GRHSGV
Trigger: CACGCCGCTGTGCCGGCCCCAGCAACTCCATGCAGC...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACGTGCTAGCGGCCAGATaGGGCCACAGTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDVLAAR*GHSQMT
Trigger: TGTCATCTGACTGTGGCCCCATCTGGCCGCTAGCAC...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAAATAGGCTTTTCGGCTaGGAAAGAAAAGTGTCTAGC +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPNRLFG*ERKVSS
Trigger: GCTAGACACTTTTCTTTCCCAGCCGAAAAGCCTATT...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGGCTCTGCACGGGCCATaGACAGCTGGGCGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKALHGP*TAGRHK
Trigger: CTTGTGCCGCCCAGCTGTCCATGGCCCGTGCAGAGC...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 72 bp AGGGCCCTGGGTCCCAGCCACATGCTATCACCAATGTaGCTAAGCACTGCTTTTAAGACTCCCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RALGPSHMLSPM*LSTAFKTPRAL
Trigger: CAGTGCCCTGGGAGTCTTAAAAGCAGTGCTTAGCAACATTGGTGATAGCATGTGGCTGGGACCCAGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAAATATCTACTGCAGGTaGATCATACTCATCACCAAG +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPNIYCR*IILITK
Trigger: CTTGGTGATGAGTATGATGCACCTGCAGTAGATATT...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATATTCATCTTTAACCTaGTCAACTTGGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPYSSLT*STWEAD
Trigger: ATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGTGGTCTCCGAACTACTaGAGCTGGAGCCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKWSPNY*SWSPGP
Trigger: AGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCA...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTACCAGCTGCATGGAGTTaGTGGGGCCGGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVPAAWS*WGRHSG
Trigger: GCCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGG...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACTGCAGGGACCTGCCCTaGATTCCCTGTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDCRDLP*IPCGAN
Trigger: ATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCA...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGCTGGCTGGGCTGGATaGGCACAGCAGCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTAGWAG*AQQPLL
Trigger: AAGGAGGGGCTGCTGTGCGCATCCAGCCCAGCCAGC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACACACTCACTGTCCTCTaGTCTGCACGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHTLTVL*SARAMD
Trigger: GTCCATGGCCCGTGCAGAGCAGAGGACAGTGAGTGT...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCAAGTGAGCTTCTTCCCTaGTTGAAATTTGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: EPVFTALSRKRASGQMGPSELLP*LKFVAE
Trigger: TTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACT...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAGCTGCATGGAGTTGCTaGGGCCGGCACAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVAAWSC*GRHSGV
Trigger: CACGCCGCTGTGCCGGCCCCAGCAACTCCATGCAGC...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGGAGAGGCCAGCTGCATaGAGTTGCTGGGGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWERPAA*SCWGRH
Trigger: GTGCCGGCCCCAGCAACTCCATGCAGCTGGCCTCTC...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACGAGAGGCCAGCTGCATaGAGTTGCTGGGGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANERPAA*SCWGRH
Trigger: GTGCCGGCCCCAGCAACTCCATGCAGCTGGCCTCTC...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACCTGGCTCCAGGCCTGTaGGCATCACAACGTTATTGC +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDLAPGL*ASQRYC
Trigger: GCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGCCCGAGCAGGAGACTaGGGGACAGTCGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHARAGD*GTVAWD
Trigger: GTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCCCGAGCAGGAGACTaGGGGACAGTCGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQARAGD*GTVAWD
Trigger: GTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATGGCATTGCTTGGCTTaGTCTGGCCCCCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRWHCLA*SGPRHP
Trigger: GGGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCCAGCTGCATGGAGTTaGTGGGGCCGGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRPAAWS*WGRHSG
Trigger: GCCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGG...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACCCACTGCAGGGACCTaGCCTGCATTCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRPTAGT*PAFPVE
Trigger: CTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGCCGAACTACTGCAGCTaGAGCCCCGGCCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKPNYCS*SPGPDF
Trigger: AAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGG...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATCCACTGGCATTGCTTaGCTTGCTCTGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRSTGIA*LALAPA
Trigger: GGCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGTACCCGATGTATTGGTaGGGTTGCCACCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKYPMYW*GCHPSR
Trigger: GCGGCTCGGGTGGCAACCCCACCAATACATCGGGTA...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp CGTTATTGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGTGGTACCCGATGTATTaGTGGGGTTGCCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: RYCFGSVSDTRECVSEPRWYPMY*WGCHPS
Trigger: GCTCGGGTGGCAACCCCACCAATACATCGGGTACCA...CCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 72 bp TGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTaGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: WLQACGHHNVIA*VLSQTPESVSQ
Trigger: CTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 72 bp CTAGCTGGCTCCAGGCCTGTGGGCATCACAACGTTATaGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LAGSRPVGITTL*LWFCLRHQRVC
Trigger: ACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATGCTCCTGTGGCCATTaGGGACACTGTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRCSCGH*GHCQQP
Trigger: GGGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGGTGCCAGGAGTAGGTaGACCCGCTATCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSGARSR*TRYLYR
Trigger: TCGATAAAGATAGCGGGTTCACCTACTCCTGGCACC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTACTTGGTGCTCCCATaGAGCTGGGAGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWYLVLP*SWEPRQ
Trigger: CTGCCTCGGCTCCCAGCTTCATGGGAGCACCAAGTA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATACTTGGTGCTCCCATaGAGCTGGGAGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTYLVLP*SWEPRQ
Trigger: CTGCCTCGGCTCCCAGCTTCATGGGAGCACCAAGTA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGGGGGCCACAGTCAGATaGCATGGCAACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWGATVR*HGNSWL
Trigger: CAGCCAGCTGTTGCCATGTCATCTGACTGTGGCCCC...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACAATGGAACAGTGAAGTaGGCCGGTCTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDNGTVK*AGLHCS
Trigger: AGAGCAGTGAAGACCGGCTCACTTCACTGTTCCATT...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACGATGTGCCCACTCTCTaGATTACAGGACCAGATGCG +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHDVPTL*ITGPDA
Trigger: CGCATCTGGTCCTGTAATTCAGAGAGTGGGCACATC...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATGGCATTGCTTGGCTTaGTCTGGCCCCCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVWHCLA*SGPRHP
Trigger: GGGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCCCCTCCACTGGCATTaGTTGGCTTGCTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLPLHWH*LACSGP
Trigger: GGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCTGCGAGAGGCCAGCTaGATGGAGTTGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHLREAS*MELLGP
Trigger: CGGCCCCAGCAACTCCATGCAGCTGGCCTCTCGCAG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCCCACTGCAGGGACCTaGCCTGCATTCCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLPTAGT*PAFPVE
Trigger: CTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGCTGGCTGGGCTGGATaGGCACAGCAGCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRAGWAG*AQQPLL
Trigger: AAGGAGGGGCTGCTGTGCGCATCCAGCCCAGCCAGC...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCACTGTCCTCTGCTCTaGACGGGCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWHCPLL*TGHGQL
Trigger: CAGCTGTCCATGGCCCGTGCAGAGCAGAGGACAGTG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACCAGGGCTTCTACAATaGCGTCTCGATCCGCTATGT +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSPGLLQ*RLDPLC
Trigger: ACATAGCGGATCGAGACGCCATTGTAGAAGCCCTGG...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACCATGACTGCCTAAACTaGGCCTTGATATTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDHDCLN*ALILLG
Trigger: CCCGAGCAATATCAAGGCCCAGTTTAGGCAGTCATG...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATCCACTGGCATTGCTTaGCTTGCTCTGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSTGIA*LALAPA
Trigger: GGCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATGTTCTCACTGGGGCTaGCCTTGTCCACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTCSHWG*PCPPLH
Trigger: GTGGAGGGGTGGACAAGGCCAGCCCCAGTGAGAACA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATACCCGATGTATTGGTaGGGTTGCCACCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTYPMYW*GCHPSR
Trigger: GCGGCTCGGGTGGCAACCCCACCAATACATCGGGTA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACCGGCACAGCGGCGTGTaGTACCCGATGTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANRHSGV*YPMYWW
Trigger: CCACCAATACATCGGGTACCACACGCCGCTGTGCCG...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCGGCACAGCGGCGTGTaGTACCCGATGTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWRHSGV*YPMYWW
Trigger: CCACCAATACATCGGGTACCACACGCCGCTGTGCCG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATGCTCCTGTGGCCATTaGGGACACTGTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVCSCGH*GHCQQP
Trigger: GGGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACCTCAAAGATCTGGTTaGGGACGGGCGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRPQRSG*GRAHSS
Trigger: GGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACCTCAAAGATCTGGTTaGGGACGGGCGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTPQRSG*GRAHSS
Trigger: GGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTGGCACCGTAGAGAGTaGTGGTCCAGCCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWWHRRE*WSSQLR
Trigger: CCTGAGTTGGCTGGACCAGCACTCTCTACGGTGCCA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATGGCACCGTAGAGAGTaGTGGTCCAGCCAACTCAGG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRWHRRE*WSSQLR
Trigger: CCTGAGTTGGCTGGACCAGCACTCTCTACGGTGCCA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGGTCTCCGAACTACTaGAGCTGGAGCCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRWSPNY*SWSPGP
Trigger: AGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCA...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATTGGTCTCCGAACTACTaGAGCTGGAGCCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHWSPNY*SWSPGP
Trigger: AGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCA...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTGGTCTCCGAACTACTaGAGCTGGAGCCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQWSPNY*SWSPGP
Trigger: AGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCCCCTCCACTGGCATTaGTTGGCTTGCTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHPLHWH*LACSGP
Trigger: GGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGATGTATTGGTGGGGTTaGCACCCGAGCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLMYWWG*HPSRWR
Trigger: CCTCCAGCGGCTCGGGTGGCAACCCCACCAATACAT...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCCCAGCTGCATGGAGTTaGTGGGGCCGGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVPAAWS*WGRHSG
Trigger: GCCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGG...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACTTTATGCCGCCCACTaGAGGGACCTGCCCTGCATT +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRLYAAH*RDLPCI
Trigger: AATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCTTTATGCCGCCCACTaGAGGGACCTGCCCTGCATT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWLYAAH*RDLPCI
Trigger: AATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACTCGCACAGAGGTAGCTaGAGCACGTTATTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDSHRGS*STLFFR
Trigger: CCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGA...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACACCGTAGAGAGTGCTaGTCCAGCCAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTHRREC*SSQLRE
Trigger: CTCCCTGAGTTGGCTGGACCAGCACTCTCTACGGTG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACTCCGCCCACTGGCTGTaGGTTTTAAGCTTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANSAHWL*VLSLRV
Trigger: CACCCGCAAGCTTAAAACCCACAGCCAGTGGGCGGA...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATCCGCCCACTGGCTGTaGGTTTTAAGCTTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRSAHWL*VLSLRV
Trigger: CACCCGCAAGCTTAAAACCCACAGCCAGTGGGCGGA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCGGGCGCACTCTTCCTaGATGTCAGGCGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWRAHSS*MSGGWL
Trigger: TAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATGTTCTCACTGGGGCTaGCCTTGTCCACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVCSHWG*PCPPLH
Trigger: GTGGAGGGGTGGACAAGGCCAGCCCCAGTGAGAACA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCGCTGCATGGAGTTGCTaGGGCCGGCACAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVAAWSC*GRHSGV
Trigger: CACGCCGCTGTGCCGGCCCCAGCAACTCCATGCAGC...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACCCAAGCACCATGCGCTaGATGATGCTGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANPSTMR*MMLLCS
Trigger: GGAGCACAACAGCATCATTCAGCGCATGGTGCTTGG...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACCAAGCACCATGCGCTaGATGATGCTGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTPSTMR*MMLLCS
Trigger: GGAGCACAACAGCATCATTCAGCGCATGGTGCTTGG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACCAAGCACCATGCGCTaGATGATGCTGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRPSTMR*MMLLCS
Trigger: GGAGCACAACAGCATCATTCAGCGCATGGTGCTTGG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAAGGAGTGGCCGTaGGGTCATCCTCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRTKEWP*GHPQGP
Trigger: AGGACCTTGAGGATGACCTCACGGCCACTCCTTTGT...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGCCCGAGCAGGAGACTaGGGGACAGTCGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINARAGD*GTVAWD
Trigger: GTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGCTCCTGTGGCCATTaGGGACACTGTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRCSCGH*GHCQQP
Trigger: GGGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCA...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTACTTGGTGCTCCCATaGAGCTGGGAGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQYLVLP*SWEPRQ
Trigger: CTGCCTCGGCTCCCAGCTTCATGGGAGCACCAAGTA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGGGGCCACAGTCAGATaGCATGGCAACAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRGATVR*HGNSWL
Trigger: CAGCCAGCTGTTGCCATGTCATCTGACTGTGGCCCC...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACGAGTCAGTGTGTACTTaGAGAAACAGTGACCACAGC +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHESVCT*RNSDHS
Trigger: GCTGTGGTCACTGTTTCTTCAAGTACACACTGACTC...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAAGACACCACTCAGACTaGCATTTGTATACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSRHHSD*HLYTPR
Trigger: CCTTGGGGTATACAAATGTCAGTCTGAGTGGTGTCT...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCATTGGTTGGCCATGACTaGCTAAACTGGGCCTTGATA +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSLVGHD*LNWALI
Trigger: TATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAA...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCAGGGGGCCCCTCGCTaGTATCCCGTCGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKQGAPR*YPVGAR
Trigger: CCTGGCACCGACGGGATAGCAGCGAGGGGCCCCCTG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGATGTATTGGTGGGGTTaGCACCCGAGCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRMYWWG*HPSRWR
Trigger: CCTCCAGCGGCTCGGGTGGCAACCCCACCAATACAT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATGCAGGGACCTGCCCTaGATTCCCTGTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRCRDLP*IPCGAN
Trigger: ATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCACTGTCCTCTGCTCTaGACGGGCCATGGACAGCTG +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHHCPLL*TGHGQL
Trigger: CAGCTGTCCATGGCCCGTGCAGAGCAGAGGACAGTG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACTCTACATGGAAATCCTaGAGTGTGCCCTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHSTWKS*SVPYRK
Trigger: CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGA...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACTTAACCACGGCAAAATaGCCTCGACCCAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDLTTAK*PRPKVL
Trigger: TAAAACCTTGGGTCGAGGCCATTTTGCCGTGGTTAA...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGCCAGGGCTTCTACAATaGCGTCTCGATCCGCTATGT +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKPGLLQ*RLDPLC
Trigger: ACATAGCGGATCGAGACGCCATTGTAGAAGCCCTGG...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGGACACTTCCGCCCACTaGCTGTGGGTTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKDTSAH*LWVLSL
Trigger: CAAGCTTAAAACCCACAGCCAGTGGGCGGAAGTGTC...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGTGTTGAGAGGGACATaGGTTTCTTGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSVLRGT*VSCPPH
Trigger: ATGAGGAGGACAAGAAACCCATGTCCCTCTCAACAC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGCGGTTGGTTACAGATaGCTTCCGGCGCAAAACCAC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTAVGYR*LPAQNH
Trigger: GTGGTTTTGCGCCGGAAGCCATCTGTAACCAACCGC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACTGGATGTCAGGCGGTTaGTTACAGATGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANWMSGG*LQMASG
Trigger: GCCGGAAGCCATCTGTAACCAACCGCCTGACATCCA...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCCTTCCTCAAAGATCTaGTTGAGGACGGGCGCACTC +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWPSSKI*LRTGAL
Trigger: GAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCCGAACTACTGCAGCTaGAGCCCCGGCCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRPNYCS*SPGPDF
Trigger: AAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGG...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACAGAATCATCATCACTaGTCTCCGAACTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSQNHHH*SPNYCS
Trigger: GCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTG...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATGTCCACCCCTCCACTaGCATTGCTTGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTCPPLH*HCLACS
Trigger: AGAGCAAGCCAAGCAATGCCAGTGGAGGGGTGGACA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCAGCATTGTTCTCACTaGGGCTGGCCTTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLQHCSH*GWPCPP
Trigger: GGGTGGACAAGGCCAGCCCCAGTGAGAACAATGCTG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTGCCACCCGAGCCGCTaGAGGGACTGCCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKCHPSR*RDCPHQ
Trigger: CTGGTGGGGGCAGTCCCTCCAGCGGCTCGGGTGGCA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATTACCCGATGTATTGGTaGGGTTGCCACCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHYPMYW*GCHPSR
Trigger: GCGGCTCGGGTGGCAACCCCACCAATACATCGGGTA...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGTGGTACCCGATGTATTaGTGGGGTTGCCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLWYPMY*WGCHPS
Trigger: GCTCGGGTGGCAACCCCACCAATACATCGGGTACCA...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCGAGAGGCCAGCTGCATaGAGTTGCTGGGGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVERPAA*SCWGRH
Trigger: GTGCCGGCCCCAGCAACTCCATGCAGCTGGCCTCTC...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGTTCCAATTCAGTGGTaGTATCTGCCATGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSVPIQW*YLPCGQ
Trigger: CTGACCACATGGCAGATACCACCACTGAATTGGAAC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGATGGCAACAGCTGGCTaGGCTGGATGCGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQMATAG*AGCAQQ
Trigger: CTGCTGTGCGCATCCAGCCCAGCCAGCTGTTGCCAT...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGATGGCAACAGCTGGCTaGGCTGGATGCGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRMATAG*AGCAQQ
Trigger: CTGCTGTGCGCATCCAGCCCAGCCAGCTGTTGCCAT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCACAGTCAGATGACATaGCAACAGCTGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWHSQMT*QQLAGL
Trigger: CAGCCCAGCCAGCTGTTGCCATGTCATCTGACTGTG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCACAAGGTCGCTAGCTaGCTCCAGGCCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQHKVAS*LQACGH
Trigger: ATGCCCACAGGCCTGGAGCCAGCTAGCGACCTTGTG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCGCTCTGCACGGGCCATaGACAGCTGGGCGGCACAAG +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVALHGP*TAGRHK
Trigger: CTTGTGCCGCCCAGCTGTCCATGGCCCGTGCAGAGC...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACGCCCACACACCAACATaGAAAGGATCACTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANAHTPT*KGSLPD
Trigger: GTCTGGGAGTGATCCTTTTCATGTTGGTGTGTGGGC...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGCACCATGCGCTGAATaGTGCTGTTGTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTAPCAE*CCCAPL
Trigger: AAGAGGAGCACAACAGCATCATTCAGCGCATGGTGC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAACAAAGGAGTGGCCGTaGGGTCATCCTCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVTKEWP*GHPQGP
Trigger: AGGACCTTGAGGATGACCTCACGGCCACTCCTTTGT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGGTGCCAGGAGTAGGTaGACCCGCTATCTTTATCGA +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTGARSR*TRYLYR
Trigger: TCGATAAAGATAGCGGGTTCACCTACTCCTGGCACC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACGATATTGCTCGGGCTTaGAGATCTGGTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHDIARA*RSGLYF
Trigger: GAAATACAGACCAGATCTGCAAGCCCGAGCAATATC...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCTGGCATTGCTTGGCTTaGTCTGGCCCCCGCCATCCC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVWHCLA*SGPRHP
Trigger: GGGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCA...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCCCCCTCCACTGGCATTaGTTGGCTTGCTCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVPLHWH*LACSGP
Trigger: GGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGG...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCCAGCTGCATGGAGTTaGTGGGGCCGGCACAGCGGC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNPAAWS*WGRHSG
Trigger: GCCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCTGCGAGAGGCCAGCTaGATGGAGTTGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINLREAS*MELLGP
Trigger: CGGCCCCAGCAACTCCATGCAGCTGGCCTCTCGCAG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATGCAGGGACCTGCCCTaGATTCCCTGTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVCRDLP*IPCGAN
Trigger: ATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCTTTATGCCGCCCACTaGAGGGACCTGCCCTGCATT +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQLYAAH*RDLPCI
Trigger: AATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACAGTTCTTTGGTGATGTaGCCACTCTCTGAATTACAG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDSSLVM*PLSELQ
Trigger: CTGTAATTCAGAGAGTGGGCACATCACCAAAGAACT...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCCAGGGCTTCTACAATaGCGTCTCGATCCGCTATGT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWPGLLQ*RLDPLC
Trigger: ACATAGCGGATCGAGACGCCATTGTAGAAGCCCTGG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGGCCTTTGCTCCTGTaGCCATTGAGGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANRPLLL*PLRTLS
Trigger: TGACAGTGTCCTCAATGGCCACAGGAGCAAAGGCCT...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCACCGTAGAGAGTGCTaGTCCAGCCAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQHRREC*SSQLRE
Trigger: CTCCCTGAGTTGGCTGGACCAGCACTCTCTACGGTG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGACACTTCCGCCCACTaGCTGTGGGTTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTDTSAH*LWVLSL
Trigger: CAAGCTTAAAACCCACAGCCAGTGGGCGGAAGTGTC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATGGATGTCAGGCGGTTaGTTACAGATGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVWMSGG*LQMASG
Trigger: GCCGGAAGCCATCTGTAACCAACCGCCTGACATCCA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCGGGCGCACTCTTCCTaGATGTCAGGCGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHRAHSS*MSGGWL
Trigger: TAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCATTAACCTGCTCAACTTaGGAGGCAGATTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSLTCST*EADSHP
Trigger: TGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAA...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATGTCCACCCCTCCACTaGCATTGCTTGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVCPPLH*HCLACS
Trigger: AGAGCAAGCCAAGCAATGCCAGTGGAGGGGTGGACA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCAGCATTGTTCTCACTaGGGCTGGCCTTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRQHCSH*GWPCPP
Trigger: GGGTGGACAAGGCCAGCCCCAGTGAGAACAATGCTG...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTGGTACCCGATGTATTaGTGGGGTTGCCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQWYPMY*WGCHPS
Trigger: GCTCGGGTGGCAACCCCACCAATACATCGGGTACCA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATTGGTACCCGATGTATTaGTGGGGTTGCCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHWYPMY*WGCHPS
Trigger: GCTCGGGTGGCAACCCCACCAATACATCGGGTACCA...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGCTGCATGGAGTTGCTaGGGCCGGCACAGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKAAWSC*GRHSGV
Trigger: CACGCCGCTGTGCCGGCCCCAGCAACTCCATGCAGC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGCTAGCGGCCAGATaGGGCCACAGTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQVLAAR*GHSQMT
Trigger: TGTCATCTGACTGTGGCCCCATCTGGCCGCTAGCAC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGGTTTTAAGTCTCTGTaGACCACATGGAGTTTATGG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSGFKSL*TTWSLW
Trigger: CCATAAACTCCATGTGGTTCACAGAGACTTAAAACC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp CGTTATTGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGAGCTTCTTCCCTGGTTaGAATTTGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: RYCFGSVSDTRECVSEPRSFFPG*NLLLNP
Trigger: TGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCT...CCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAATACTTTGTAGCTGGTaGAGGGTCCACTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTILCSW*RVHSLK
Trigger: CTTCAGGGAGTGGACCCTTCACCAGCTACAAAGTAT...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGACAAAGGAGTGGCCGTaGGGTCATCCTCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRTKEWP*GHPQGP
Trigger: AGGACCTTGAGGATGACCTCACGGCCACTCCTTTGT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAACAGTGAAGTaGGCCGGTCTTCACTGCTCT +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTNGTVK*AGLHCS
Trigger: AGAGCAGTGAAGACCGGCTCACTTCACTGTTCCATT...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTCCCAGGGCACTGCATaGAAAAACAGCAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQSQGTA*KNSNWP
Trigger: GGGCCAGTTGCTGTTTTTTCATGCAGTGCCCTGGGA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACTGCTGATCCTAAAGTaGGCACCATATATACATCTG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSLLILK*APYIHL
Trigger: CAGATGTATATATGGTGCTCACTTTAGGATCAGCAG...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACAGTGTTTTGTTAGTTaGTTCTTTTTCCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSQCFVS*FFFLSR
Trigger: CCGGCTGAGGAAAAAGAAGCAACTAACAAAACACTG...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296088.12
CDS-3UTR GCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACCCTCGCTTAAATCCTaGCATGCTGGTCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTPSLKS*HAGPTE
Trigger: TTCTGTTGGACCAGCATGGCAGGATTTAAGCGAGGG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCCCTCGCTTAAATCCTaGCATGCTGGTCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWPSLKS*HAGPTE
Trigger: TTCTGTTGGACCAGCATGGCAGGATTTAAGCGAGGG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp CGTTATTGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGCGGACGATGTTAGGATaGTGCACTAGTTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: RYCFGSVSDTRECVSEPRRTMLG*CTSFMH
Trigger: ATGCATGAAACTAGTGCAGCATCCTAACATCGTCCG...CCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCATGTATTGGTGGGGTTaGCACCCGAGCCGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVMYWWG*HPSRWR
Trigger: CCTCCAGCGGCTCGGGTGGCAACCCCACCAATACAT...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTGCAGGGACCTGCCCTaGATTCCCTGTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQCRDLP*IPCGAN
Trigger: ATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACCAGAGAAAAACTTTATaGCGCCCACTGCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANQRKTL*RPLQGP
Trigger: AGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTG...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACTTCAGTGGTGGTATCTaGCATGTGGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHFSGGI*HVVREK
Trigger: TTTTTCTCTGACCACATGGCAGATACCACCACTGAA...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGCTGGCTGGGCTGGATaGGCACAGCAGCCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNAGWAG*AQQPLL
Trigger: AAGGAGGGGCTGCTGTGCGCATCCAGCCCAGCCAGC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACAAGTGTCTAGCAGCATaGACAAAGACCATGCATTGT +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHKCLAA*TKTMHC
Trigger: ACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACATGACTGCCTAAACTaGGCCTTGATATTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTHDCLN*ALILLG
Trigger: CCCGAGCAATATCAAGGCCCAGTTTAGGCAGTCATG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAGACACTTCCGCCCACTaGCTGTGGGTTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVDTSAH*LWVLSL
Trigger: CAAGCTTAAAACCCACAGCCAGTGGGCGGAAGTGTC...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGCGGTTGGTTACAGATaGCTTCCGGCGCAAAACCAC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHAVGYR*LPAQNH
Trigger: GTGGTTTTGCGCCGGAAGCCATCTGTAACCAACCGC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGGTTGGTTACAGATaGCTTCCGGCGCAAAACCAC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQAVGYR*LPAQNH
Trigger: GTGGTTTTGCGCCGGAAGCCATCTGTAACCAACCGC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATTGGATGTCAGGCGGTTaGTTACAGATGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHWMSGG*LQMASG
Trigger: GCCGGAAGCCATCTGTAACCAACCGCCTGACATCCA...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTGGATGTCAGGCGGTTaGTTACAGATGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQWMSGG*LQMASG
Trigger: GCCGGAAGCCATCTGTAACCAACCGCCTGACATCCA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCCTTCCTCAAAGATCTaGTTGAGGACGGGCGCACTC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRPSSKI*LRTGAL
Trigger: GAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGG...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCCTTCCTCAAAGATCTaGTTGAGGACGGGCGCACTC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQPSSKI*LRTGAL
Trigger: GAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGTCCACCCCTCCACTaGCATTGCTTGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRCPPLH*HCLACS
Trigger: AGAGCAAGCCAAGCAATGCCAGTGGAGGGGTGGACA...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATCCTTAGGGTTCCGCTaGATGTTCACAGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTSLGFR*MFTEMV
Trigger: GACCATCTCTGTGAACATCCAGCGGAACCCTAAGGA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTCCTTAGGGTTCCGCTaGATGTTCACAGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWSLGFR*MFTEMV
Trigger: GACCATCTCTGTGAACATCCAGCGGAACCCTAAGGA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCATGGCAACAGCTGGCTaGGCTGGATGCGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVMATAG*AGCAQQ
Trigger: CTGCTGTGCGCATCCAGCCCAGCCAGCTGTTGCCAT...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCACAGTCAGATGACATaGCAACAGCTGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQHSQMT*QQLAGL
Trigger: CAGCCCAGCCAGCTGTTGCCATGTCATCTGACTGTG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCTGGCTCCAGGCCTGTaGGCATCACAACGTTATTGC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQLAPGL*ASQRYC
Trigger: GCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGGGTATGTTCAACTGTaGTTTAAGGTTCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSGYVQL*FKVLSA
Trigger: TGCACTGAGAACCTTAAACCACAGTTGAACATACCC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACCACACATCTTATTTCTaGCCCTTTATAAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDHTSYF*PFIRSL
Trigger: CAGGGATCTTATAAAGGGCCAGAAATAAGATGTGTG...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGCTATGCAGCATAAATaGTCAACACTGCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSAMQHK*STLLIL
Trigger: TAGGATCAGCAGTGTTGACCATTTATGCTGCATAGC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAACTTCCTGGAAAAGATaGCCAGTAGCTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTTSWKR*PVARVS
Trigger: GGACACTCTAGCTACTGGTCATCTTTTCCAGGAAGT...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR TCA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACGTTGAAATTTGTTGCTaGACCCAAAGTCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHVEICC*TQSLST
Trigger: AGTTGACAGACTTTGGGTTCAGCAACAAATTTCAAC...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGCCCACACACCAACATaGAAAGGATCACTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRAHTPT*KGSLPD
Trigger: GTCTGGGAGTGATCCTTTTCATGTTGGTGTGTGGGC...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGCACCATGCGCTGAATaGTGCTGTTGTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRAPCAE*CCCAPL
Trigger: AAGAGGAGCACAACAGCATCATTCAGCGCATGGTGC...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAATTTTGGTTGGCCATaGCTGCCTAAACTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANNFGWP*LPKLGL
Trigger: AAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATT...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTACTTGGTGCTCCCATaGAGCTGGGAGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINYLVLP*SWEPRQ
Trigger: CTGCCTCGGCTCCCAGCTTCATGGGAGCACCAAGTA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGATGTGCCCACTCTCTaGATTACAGGACCAGATGCG +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRDVPTL*ITGPDA
Trigger: CGCATCTGGTCCTGTAATTCAGAGAGTGGGCACATC...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGACACTCACTGTCCTCTaGTCTGCACGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMTLTVL*SARAMD
Trigger: GTCCATGGCCCGTGCAGAGCAGAGGACAGTGAGTGT...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATCTACATGGAAATCCTaGAGTGTGCCCTACAGGAAG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRSTWKS*SVPYRK
Trigger: CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGGGTTAGTTAAAAGGTaGCATTCCAAGGCTATACAT +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSGLVKR*HSKAIH
Trigger: ATGTATAGCCTTGGAATGGCACCTTTTAACTAACCC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAAGTGAGCTTCTTCCCTaGTTGAAATTTGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSSELLP*LKFVAE
Trigger: TTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACT...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGTGTTTCACTGTCATTaGCTTCTTGAAAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTVFHCH*LLERAA
Trigger: AGCCGCCCTTTCAAGAAGCCAATGACAGTGAAACAC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCCAGGGCTTCTACAATaGCGTCTCGATCCGCTATGT +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHPGLLQ*RLDPLC
Trigger: ACATAGCGGATCGAGACGCCATTGTAGAAGCCCTGG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAGGCCTTTGCTCCTGTaGCCATTGAGGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRRPLLL*PLRTLS
Trigger: TGACAGTGTCCTCAATGGCCACAGGAGCAAAGGCCT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATAGGCCTTTGCTCCTGTaGCCATTGAGGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHRPLLL*PLRTLS
Trigger: TGACAGTGTCCTCAATGGCCACAGGAGCAAAGGCCT...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAGTGTTGAGAGGGACATaGGTTTCTTGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRVLRGT*VSCPPH
Trigger: ATGAGGAGGACAAGAAACCCATGTCCCTCTCAACAC...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTCCACTGGCATTGCTTaGCTTGCTCTGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNSTGIA*LALAPA
Trigger: GGCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCGGCACAGCGGCGTGTaGTACCCGATGTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINRHSGV*YPMYWW
Trigger: CCACCAATACATCGGGTACCACACGCCGCTGTGCCG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACTCCGTTCCAATTCAGTaGTGGTATCTGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANSVPIQ*WYLPCG
Trigger: ACCACATGGCAGATACCACCACTGAATTGGAACGGA...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATCCTTAGGGTTCCGCTaGATGTTCACAGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSLGFR*MFTEMV
Trigger: GACCATCTCTGTGAACATCCAGCGGAACCCTAAGGA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCACAAGGTCGCTAGCTaGCTCCAGGCCTGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINHKVAS*LQACGH
Trigger: ATGCCCACAGGCCTGGAGCCAGCTAGCGACCTTGTG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGATACTTTGTAGCTGGTaGAGGGTCCACTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRILCSW*RVHSLK
Trigger: CTTCAGGGAGTGGACCCTTCACCAGCTACAAAGTAT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCCCAAGCACCATGCGCTaGATGATGCTGTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVPSTMR*MMLLCS
Trigger: GGAGCACAACAGCATCATTCAGCGCATGGTGCTTGG...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAACCAAATGGAACAGTaGAGTGAGCCGGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVNQMEQ*SEPVFT
Trigger: AGTGAAGACCGGCTCACTTCACTGTTCCATTTGGTT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCGGACGATGTTAGGATaGTGCACTAGTTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWRTMLG*CTSFMH
Trigger: ATGCATGAAACTAGTGCAGCATCCTAACATCGTCCG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTTCTGGAGCGGAATATaGAAGAGATCCACAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWFWSGI*KRSTAC
Trigger: ACAAGCTGTGGATCTCTTGCATATTCCGCTCCAGAA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACGATATTGCTCGGGCTTaGAGATCTGGTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANDIARA*RSGLYF
Trigger: GAAATACAGACCAGATCTGCAAGCCCGAGCAATATC...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCAGAGAAAAACTTTATaGCGCCCACTGCAGGGACCT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRQRKTL*RPLQGP
Trigger: AGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTG...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGGGAAATCCTGCAGTGTaGCCTACAGGAAGGAATTTA +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWGNPAV*PTGRNL
Trigger: TAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCC...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGAATTACAGGACCAGATaGGTCTCAGTCCGTCACCTC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQNYRTR*VSVRHL
Trigger: GAGGTGACGGACTGAGACGCATCTGGTCCTGTAATT...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGTCATCCTCAAGGTCCTaGGGTACATCAATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKSSSRS*GTSILV
Trigger: AACCAAAATTGATGTACCCCAGGACCTTGAGGATGA...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTCCGCCCACTGGCTGTaGGTTTTAAGCTTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINSAHWL*VLSLRV
Trigger: CACCCGCAAGCTTAAAACCCACAGCCAGTGGGCGGA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTTAACCTGCTCAACTTaGGAGGCAGATTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWLTCST*EADSHP
Trigger: TGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGTGTCCACCCCTCCACTaGCATTGCTTGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMCPPLH*HCLACS
Trigger: AGAGCAAGCCAAGCAATGCCAGTGGAGGGGTGGACA...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTGTTCTCACTGGGGCTaGCCTTGTCCACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKCSHWG*PCPPLH
Trigger: GTGGAGGGGTGGACAAGGCCAGCCCCAGTGAGAACA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCGGCACAGCGGCGTGTaGTACCCGATGTATTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNRHSGV*YPMYWW
Trigger: CCACCAATACATCGGGTACCACACGCCGCTGTGCCG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGATGGCAACAGCTGGCTaGGCTGGATGCGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKMATAG*AGCAQQ
Trigger: CTGCTGTGCGCATCCAGCCCAGCCAGCTGTTGCCAT...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAGTTCTTCTATCTACATaGAAATCCTGCAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRVLLST*KSCSVP
Trigger: GGGCACACTGCAGGATTTCCATGTAGATAGAAGAAC...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGTTTTCAATGTCGTCATaGATATCTCAGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLFSMSS*ISQPAG
Trigger: GCCTGCCGGCTGAGATATCCATGACGACATTGAAAA...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429705.6
CDS-3UTR TCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGAGCTTCTTCCCTGGTTaGAATTTGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLSFFPG*NLLLNP
Trigger: TGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCT...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAATTTTGGTTGGCCATaGCTGCCTAAACTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRNFGWP*LPKLGL
Trigger: AAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTCCTCAAAGATCTGGTTaGGGACGGGCGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFPQRSG*GRAHSS
Trigger: GGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGG...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCCTCAAAGATCTGGTTaGGGACGGGCGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNPQRSG*GRAHSS
Trigger: GGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTGTCACCTCAGACACATaGCTCGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFVTSDT*LGAEEW
Trigger: CCACTCTTCAGCCCCGAGTCATGTGTCTGAGGTGAC...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp CGTTATTGCTTTGGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGTGTGACGACATACTATaGCATACAAAACATGCACAA +
Preference number: 4 (lower is better)
Translates to: RYCFGSVSDTRECVSEPRCDDIL*HTKHAQ
Trigger: TTGTGCATGTTTTGTATGTCATAGTATGTCGTCACA...CCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACCAAAGCAATAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGACTATATGCAACTTTTaGAGACAGGTTAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKTICNF*RQVKGY
Trigger: GTACCCCTTAACCTGTCTTCAAAAGTTGCATATAGT...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGCTGCACTAGTTTCATaGATCTCACTTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTAALVS*ISLPGK
Trigger: TTTTCCAGGAAGTGAGATGCATGAAACTAGTGCAGC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTTGGTTGGCCATGACTaGCTAAACTGGGCCTTGATA +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQLVGHD*LNWALI
Trigger: TATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGTATTCATCTTTAACCTaGTCAACTTGGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKYSSLT*STWEAD
Trigger: ATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATA...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTCGCACAGAGGTAGCTaGAGCACGTTATTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQSHRGS*STLFFR
Trigger: CCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAGTGTCTAGCAGCATaGACAAAGACCATGCATTGT +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANKCLAA*TKTMHC
Trigger: ACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAGTGTCTAGCAGCATaGACAAAGACCATGCATTGT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWKCLAA*TKTMHC
Trigger: ACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGGCATCACAACGTTATTaGTTTGGTTCTGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWASQRY*FGSVSD
Trigger: GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGC...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACCAAGCAGAATTTCTaGAGCGGAATATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRTKQNF*SGICKR
Trigger: TCTCTTGCATATTCCGCTCCAGAAATTCTGCTTGGT...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACCAAGCAGAATTTCTaGAGCGGAATATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANTKQNF*SGICKR
Trigger: TCTCTTGCATATTCCGCTCCAGAAATTCTGCTTGGT...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGTTTCACTGTCATTaGCTTCTTGAAAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQVFHCH*LLERAA
Trigger: AGCCGCCCTTTCAAGAAGCCAATGACAGTGAAACAC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAAGAAGCCCTTCTCTTaGGATCTCTCTGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRKKPFS*DLSVAS
Trigger: GGATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGAAGAAGCCCTTCTCTTaGGATCTCTCTGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQKKPFS*DLSVAS
Trigger: GGATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTT...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCACCGTAGAGAGTGCTaGTCCAGCCAACTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNHRREC*SSQLRE
Trigger: CTCCCTGAGTTGGCTGGACCAGCACTCTCTACGGTG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTCGGGCGCACTCTTCCTaGATGTCAGGCGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFRAHSS*MSGGWL
Trigger: TAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCG...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCGGGCGCACTCTTCCTaGATGTCAGGCGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKRAHSS*MSGGWL
Trigger: TAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCCTTCCTCAAAGATCTaGTTGAGGACGGGCGCACTC +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINPSSKI*LRTGAL
Trigger: GAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGAATCATCATCACTaGTCTCCGAACTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHQNHHH*SPNYCS
Trigger: GCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCAGCATTGTTCTCACTaGGGCTGGCCTTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNQHCSH*GWPCPP
Trigger: GGGTGGACAAGGCCAGCCCCAGTGAGAACAATGCTG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCAGCATTGTTCTCACTaGGGCTGGCCTTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKQHCSH*GWPCPP
Trigger: GGGTGGACAAGGCCAGCCCCAGTGAGAACAATGCTG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGTTCCAATTCAGTGGTaGTATCTGCCATGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHVPIQW*YLPCGQ
Trigger: CTGACCACATGGCAGATACCACCACTGAATTGGAAC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCTCCTTAGGGTTCCGCTaGATGTTCACAGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGSLGFR*MFTEMV
Trigger: GACCATCTCTGTGAACATCCAGCGGAACCCTAAGGA...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGTGCTAGCGGCCAGATaGGGCCACAGTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKVLAAR*GHSQMT
Trigger: TGTCATCTGACTGTGGCCCCATCTGGCCGCTAGCAC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGTGCTAGCGGCCAGATaGGGCCACAGTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNVLAAR*GHSQMT
Trigger: TGTCATCTGACTGTGGCCCCATCTGGCCGCTAGCAC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGCAGAGGCCAAATGCTaGGGATGCCAAAGCAGACTC +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINAEAKC*GCQSRL
Trigger: GAGTCTGCTTTGGCATCCCCAGCATTTGGCCTCTGC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454177.5
CDS-3UTR TCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCACTTCCTGGAAAAGATaGCCAGTAGCTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGTSWKR*PVARVS
Trigger: GGACACTCTAGCTACTGGTCATCTTTTCCAGGAAGT...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGGTTGAAATTTGTTGCTaGACCCAAAGTCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWVEICC*TQSLST
Trigger: AGTTGACAGACTTTGGGTTCAGCAACAAATTTCAAC...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR TCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAGCTTCTTCCCTGGTTaGAATTTGTTGCTGAACCCA +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRSFFPG*NLLLNP
Trigger: TGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR TCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGATACTTTGTAGCTGGTaGAGGGTCCACTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMILCSW*RVHSLK
Trigger: CTTCAGGGAGTGGACCCTTCACCAGCTACAAAGTAT...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACGAATGCCACAACAGATaGTTATCTGGTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: KVSSSMHKDHALSHHQANECHNR*LSGQKQ
Trigger: CTGTTTTTGACCAGATAATCATCTGTTGTGGCATTC...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTCCCAGGGCACTGCATaGAAAAACAGCAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNSQGTA*KNSNWP
Trigger: GGGCCAGTTGCTGTTTTTTCATGCAGTGCCCTGGGA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATAATGCAGTTCTTTGGTaGTGTGCCCACTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHNAVLW*CAHSLN
Trigger: ATTCAGAGAGTGGGCACATCACCAAAGAACTGCATT...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGTACTTGAAGAAACAGTaGCCACAGCAATGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLYLKKQ*PQQCSS
Trigger: AGAACTGCATTGCTGTGGTCACTGTTTCTTCAAGTA...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATCCCTCCCTTTTATGTaGCGACATACTATGACATAC +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSLPFM*RHTMTY
Trigger: GTATGTCATAGTATGTCGTCACATAAAAGGGAGGGA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAGCTGCACTAGTTTCATaGATCTCACTTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVAALVS*ISLPGK
Trigger: TTTTCCAGGAAGTGAGATGCATGAAACTAGTGCAGC...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGATATTGCTCGGGCTTaGAGATCTGGTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHDIARA*RSGLYF
Trigger: GAAATACAGACCAGATCTGCAAGCCCGAGCAATATC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATTCAGTGGTGGTATCTaGCATGTGGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVFSGGI*HVVREK
Trigger: TTTTTCTCTGACCACATGGCAGATACCACCACTGAA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCATGCACAAAGACCATaGATTGTCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHHAQRP*IVTSSG
Trigger: GCCTGATGATGTGACAATGCATGGTCTTTGTGCATG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCATGCACAAAGACCATaGATTGTCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRHAQRP*IVTSSG
Trigger: GCCTGATGATGTGACAATGCATGGTCTTTGTGCATG...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGAAATCCTGCAGTGTaGCCTACAGGAAGGAATTTA +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQGNPAV*PTGRNL
Trigger: TAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCTTGCCAACATTTGTGTaGACCTTCTGTACTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGLPTFV*TFCTRP
Trigger: GGGCCTAGTACAGAAGGTGCACACAAATGTTGGCAA...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCAATTACAGGACCAGATaGGTCTCAGTCCGTCACCTC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVNYRTR*VSVRHL
Trigger: GAGGTGACGGACTGAGACGCATCTGGTCCTGTAATT...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAGTTCTTTGGTGATGTaGCCACTCTCTGAATTACAG +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSSLVM*PLSELQ
Trigger: CTGTAATTCAGAGAGTGGGCACATCACCAAAGAACT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTTAACCACGGCAAAATaGCCTCGACCCAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQLTTAK*PRPKVL
Trigger: TAAAACCTTGGGTCGAGGCCATTTTGCCGTGGTTAA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATCATCCTCAAGGTCCTaGGGTACATCAATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSSSRS*GTSILV
Trigger: AACCAAAATTGATGTACCCCAGGACCTTGAGGATGA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTTAACCTGCTCAACTTaGGAGGCAGATTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQLTCST*EADSHP
Trigger: TGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCCAGAATCATCATCACTaGTCTCCGAACTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGQNHHH*SPNYCS
Trigger: GCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTG...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAGTGGTATCTGCCATGTaGTCAGAGAAAAACTTTATG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRVVSAM*SEKNFM
Trigger: CATAAAGTTTTTCTCTGACCACATGGCAGATACCAC...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGTGGTATCTGCCATGTaGTCAGAGAAAAACTTTATG +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTVVSAM*SEKNFM
Trigger: CATAAAGTTTTTCTCTGACCACATGGCAGATACCAC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCGTTCCAATTCAGTGGTaGTATCTGCCATGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGVPIQW*YLPCGQ
Trigger: CTGACCACATGGCAGATACCACCACTGAATTGGAAC...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGTTCTTCTATCTACATaGAAATCCTGCAGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHVLLST*KSCSVP
Trigger: GGGCACACTGCAGGATTTCCATGTAGATAGAAGAAC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGACTTCCTGGAAAAGATaGCCAGTAGCTAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMTSWKR*PVARVS
Trigger: GGACACTCTAGCTACTGGTCATCTTTTCCAGGAAGT...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAGTTGAAATTTGTTGCTaGACCCAAAGTCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVVEICC*TQSLST
Trigger: AGTTGACAGACTTTGGGTTCAGCAACAAATTTCAAC...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR TCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTGCACCATGCGCTGAATaGTGCTGTTGTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFAPCAE*CCCAPL
Trigger: AAGAGGAGCACAACAGCATCATTCAGCGCATGGTGC...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGCACCATGCGCTGAATaGTGCTGTTGTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKAPCAE*CCCAPL
Trigger: AAGAGGAGCACAACAGCATCATTCAGCGCATGGTGC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCGAGTCAGTGTGTACTTaGAGAAACAGTGACCACAGC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVESVCT*RNSDHS
Trigger: GCTGTGGTCACTGTTTCTTCAAGTACACACTGACTC...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATTCCCTCCCTTTTATGTaGCGACATACTATGACATAC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHSLPFM*RHTMTY
Trigger: GTATGTCATAGTATGTCGTCACATAAAAGGGAGGGA...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCCCTCGCTTAAATCCTaGCATGCTGGTCCAACAGAA +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINPSLKS*HAGPTE
Trigger: TTCTGTTGGACCAGCATGGCAGGATTTAAGCGAGGG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCTGCACTAGTTTCATaGATCTCACTTCCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQAALVS*ISLPGK
Trigger: TTTTCCAGGAAGTGAGATGCATGAAACTAGTGCAGC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAATATCTACTGCAGGTaGATCATACTCATCACCAAG +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVNIYCR*IILITK
Trigger: CTTGGTGATGAGTATGATGCACCTGCAGTAGATATT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCTTGGTTGGCCATGACTaGCTAAACTGGGCCTTGATA +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVLVGHD*LNWALI
Trigger: TATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAA...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCTCGCACAGAGGTAGCTaGAGCACGTTATTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVSHRGS*STLFFR
Trigger: CCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGA...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATACCAAGCAGAATTTCTaGAGCGGAATATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHTKQNF*SGICKR
Trigger: TCTCTTGCATATTCCGCTCCAGAAATTCTGCTTGGT...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGGTGTTTCACTGTCATTaGCTTCTTGAAAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMVFHCH*LLERAA
Trigger: AGCCGCCCTTTCAAGAAGCCAATGACAGTGAAACAC...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACACTCTTTAGACACATaGGATGGTACTGTATATTTG +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRHSLDT*DGTVYL
Trigger: CAAATATACAGTACCATCCCATGTGTCTAAAGAGTG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCATGACTGCCTAAACTaGGCCTTGATATTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINHDCLN*ALILLG
Trigger: CCCGAGCAATATCAAGGCCCAGTTTAGGCAGTCATG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTCATCCTCAAGGTCCTaGGGTACATCAATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRSSSRS*GTSILV
Trigger: AACCAAAATTGATGTACCCCAGGACCTTGAGGATGA...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTAGGCCTTTGCTCCTGTaGCCATTGAGGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFRPLLL*PLRTLS
Trigger: TGACAGTGTCCTCAATGGCCACAGGAGCAAAGGCCT...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGACACTTCCGCCCACTaGCTGTGGGTTTTAAGCTTG +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNDTSAH*LWVLSL
Trigger: CAAGCTTAAAACCCACAGCCAGTGGGCGGAAGTGTC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCGTGTTGAGAGGGACATaGGTTTCTTGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVVLRGT*VSCPPH
Trigger: ATGAGGAGGACAAGAAACCCATGTCCCTCTCAACAC...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACACGTAGATTTCTCTTaGACTTTCACACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTHVDFS*TFTLEN
Trigger: ATTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCACGTAGATTTCTCTTaGACTTTCACACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSSMHKDHALSHHQANKWHVDFS*TFTLEN
Trigger: ATTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAATAGGCTTTTCGGCTaGGAAAGAAAAGTGTCTAGC +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRNRLFG*ERKVSS
Trigger: GCTAGACACTTTTCTTTCCCAGCCGAAAAGCCTATT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCACACATCTTATTTCTaGCCCTTTATAAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLHTSYF*PFIRSL
Trigger: CAGGGATCTTATAAAGGGCCAGAAATAAGATGTGTG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
3UTR CAA 72 bp AGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATaGTCACATCATCAGGCGAACAAATGGAAAGGTAAT +
Preference number: 4 (lower is better)
Translates to: RKVSSSMHKDHA*SHHQANKWKGN
Trigger: ATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCGGTTTTAAGTCTCTGTaGACCACATGGAGTTTATGG +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGGFKSL*TTWSLW
Trigger: CCATAAACTCCATGTGGTTCACAGAGACTTAAAACC...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGATACTTTGTAGCTGGTaGAGGGTCCACTCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKILCSW*RVHSLK
Trigger: CTTCAGGGAGTGGACCCTTCACCAGCTACAAAGTAT...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGTTGCTTCTTTTTCCTaGGCAGAGGCCAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKVASFS*AEAKCW
Trigger: CCAGCATTTGGCCTCTGCTCAGGAAAAAGAAGCAAC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454177.5
CDS-3UTR GCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGGTCAATAACTTTTACTaGCACCTTTTCACCCGTAAA +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLVNNFY*HLFTRK
Trigger: TTTACGGGTGAAAAGGTGGCAGTAAAAGTTATTGAC...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATACTCCAAATATCTACTaGAGGTGCATCATACTCATC +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHTPNIY*RCIILI
Trigger: GATGAGTATGATGCACCTGCAGTAGATATTTGGAGT...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGTGTTTCACTGTCATTaGCTTCTTGAAAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINVFHCH*LLERAA
Trigger: AGCCGCCCTTTCAAGAAGCCAATGACAGTGAAACAC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATTTAGACACATGGGATaGTACTGTATATTTGCAATC +
Preference number: 4 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTFRHMG*YCIFAI
Trigger: GATTGCAAATATACAGTACCATCCCATGTGTCTAAA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATTTAGACACATGGGATaGTACTGTATATTTGCAATC +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRFRHMG*YCIFAI
Trigger: GATTGCAAATATACAGTACCATCCCATGTGTCTAAA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCACTCTTTAGACACATaGGATGGTACTGTATATTTG +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLHSLDT*DGTVYL
Trigger: CAAATATACAGTACCATCCCATGTGTCTAAAGAGTG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTACACTCTTTAGACACATaGGATGGTACTGTATATTTG +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVHSLDT*DGTVYL
Trigger: CAAATATACAGTACCATCCCATGTGTCTAAAGAGTG...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCATGACTGCCTAAACTaGGCCTTGATATTGCTCGGG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKHDCLN*ALILLG
Trigger: CCCGAGCAATATCAAGGCCCAGTTTAGGCAGTCATG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGTGTTGAGAGGGACATaGGTTTCTTGTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINVLRGT*VSCPPH
Trigger: ATGAGGAGGACAAGAAACCCATGTCCCTCTCAACAC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGATTTGTGAACTGTACCTaGAGAAGCTATATTCATCTT +
Preference number: 4 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRFVNCT*RSYIHL
Trigger: AAGATGAATATAGCTTCTCCAGGTACAGTTCACAAA...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGGTATCTGCCATGTaGTCAGAGAAAAACTTTATG +
Preference number: 4 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQVVSAM*SEKNFM
Trigger: CATAAAGTTTTTCTCTGACCACATGGCAGATACCAC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGTGGTATCTGCCATGTaGTCAGAGAAAAACTTTATG +
Preference number: 4 (lower is better)
Translates to: WERKVSSSMHKDHALSHHVVSAM*SEKNFM
Trigger: CATAAAGTTTTTCTCTGACCACATGGCAGATACCAC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTCCGTTCCAATTCAGTaGTGGTATCTGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINSVPIQ*WYLPCG
Trigger: ACCACATGGCAGATACCACCACTGAATTGGAACGGA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAGCAAATATGTTCTATaGCTTCACCCACACATCTAT +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSKYVL*LHPHIY
Trigger: ATAGATGTGTGGGTGAAGCCATAGAACATATTTGCT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAGTATTTACACTGCTTaGAAAACAGCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSIYTA*KTAATK
Trigger: CTTTGTTGCAGCTGTTTTCCAAGCAGTGTAAATACT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCGCTATGCAGCATAAATaGTCAACACTGCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGAMQHK*STLLIL
Trigger: TAGGATCAGCAGTGTTGACCATTTATGCTGCATAGC...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGAATTTTGGTTGGCCATaGCTGCCTAAACTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKNFGWP*LPKLGL
Trigger: AAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATT...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATAACCAAATGGAACAGTaGAGTGAGCCGGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNNQMEQ*SEPVFT
Trigger: AGTGAAGACCGGCTCACTTCACTGTTCCATTTGGTT...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCCGCTCACTATCTATGTaGACCACACATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGRSLSM*TTHLIS
Trigger: AGAAATAAGATGTGTGGTTCACATAGATAGTGAGCG...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCCTGCTGATCCTAAAGTaGGCACCATATATACATCTG +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVLLILK*APYIHL
Trigger: CAGATGTATATATGGTGCTCACTTTAGGATCAGCAG...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTAGACACCACTCAGACTaGCATTTGTATACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFRHHSD*HLYTPR
Trigger: CCTTGGGGTATACAAATGTCAGTCTGAGTGGTGTCT...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTTGGTTGGCCATGACTaGCTAAACTGGGCCTTGATA +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNLVGHD*LNWALI
Trigger: TATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCTTCAGTGGTGGTATCTaGCATGTGGTCAGAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVFSGGI*HVVREK
Trigger: TTTTTCTCTGACCACATGGCAGATACCACCACTGAA...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTCGCACAGAGGTAGCTaGAGCACGTTATTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKSHRGS*STLFFR
Trigger: CCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCATGCACAAAGACCATaGATTGTCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINHAQRP*IVTSSG
Trigger: GCCTGATGATGTGACAATGCATGGTCTTTGTGCATG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGGCATCACAACGTTATTaGTTTGGTTCTGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMASQRY*FGSVSD
Trigger: GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGC...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTAAGAAGCCCTTCTCTTaGGATCTCTCTGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFKKPFS*DLSVAS
Trigger: GGATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTT...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATAAGAAGCCCTTCTCTTaGGATCTCTCTGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNKKPFS*DLSVAS
Trigger: GGATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTT...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGTTTGTGAACTGTACCTaGAGAAGCTATATTCATCTT +
Preference number: 4 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLFVNCT*RSYIHL
Trigger: AAGATGAATATAGCTTCTCCAGGTACAGTTCACAAA...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCAGAATCATCATCACTaGTCTCCGAACTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKQNHHH*SPNYCS
Trigger: GCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTCCGTTCCAATTCAGTaGTGGTATCTGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKSVPIQ*WYLPCG
Trigger: ACCACATGGCAGATACCACCACTGAATTGGAACGGA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTCCGTTCCAATTCAGTaGTGGTATCTGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNSVPIQ*WYLPCG
Trigger: ACCACATGGCAGATACCACCACTGAATTGGAACGGA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR TCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTACTTGAAGAAACAGTaGCCACAGCAATGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINYLKKQ*PQQCSS
Trigger: AGAACTGCATTGCTGTGGTCACTGTTTCTTCAAGTA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCCGCTCACTATCTATGTaGACCACACATCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVRSLSM*TTHLIS
Trigger: AGAAATAAGATGTGTGGTTCACATAGATAGTGAGCG...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCGGACGATGTTAGGATaGTGCACTAGTTTCATGCAT +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKRTMLG*CTSFMH
Trigger: ATGCATGAAACTAGTGCAGCATCCTAACATCGTCCG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCACTCCAAATATCTACTaGAGGTGCATCATACTCATC +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVTPNIY*RCIILI
Trigger: GATGAGTATGATGCACCTGCAGTAGATATTTGGAGT...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGATATTGCTCGGGCTTaGAGATCTGGTCTGTATTTC +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKDIARA*RSGLYF
Trigger: GAAATACAGACCAGATCTGCAAGCCCGAGCAATATC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCATGCACAAAGACCATaGATTGTCACATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNHAQRP*IVTSSG
Trigger: GCCTGATGATGTGACAATGCATGGTCTTTGTGCATG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTTTAACCACGGCAAAATaGCCTCGACCCAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFLTTAK*PRPKVL
Trigger: TAAAACCTTGGGTCGAGGCCATTTTGCCGTGGTTAA...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTCATCCTCAAGGTCCTaGGGTACATCAATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINSSSRS*GTSILV
Trigger: AACCAAAATTGATGTACCCCAGGACCTTGAGGATGA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTTAACCTGCTCAACTTaGGAGGCAGATTCTCATCCA +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNLTCST*EADSHP
Trigger: TGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTTTGTGAACTGTACCTaGAGAAGCTATATTCATCTT +
Preference number: 4 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRFVNCT*RSYIHL
Trigger: AAGATGAATATAGCTTCTCCAGGTACAGTTCACAAA...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCAGTATTTACACTGCTTaGAAAACAGCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: LALYKIPAQEFQANMFYGSIYTA*KTAATK
Trigger: CTTTGTTGCAGCTGTTTTCCAAGCAGTGTAAATACT...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCTGTGACGACATACTATaGCATACAAAACATGCACAA +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVCDDIL*HTKHAQ
Trigger: TTGTGCATGTTTTGTATGTCATAGTATGTCGTCACA...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGTCAATGTTTACACAATaGGGGAAATCAACCAGCATT +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMSMFTQ*GKSTSI
Trigger: AATGCTGGTTGATTTCCCTCATTGTGTAAACATTGA...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTATTCATCTTTAACCTaGTCAACTTGGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINYSSLT*STWEAD
Trigger: ATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCACTACAGGGGAAGCTaGCTTATAAATCTAAGTACT +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINHYRGS*LINLST
Trigger: AGTACTTAGATTTATAAGGCAGCTTCCCCTGTAGTG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCTTTTCAATGTCGTCATaGATATCCTGCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVFSMSS*ISCKLH
Trigger: ATGCAGTTTGCAGGATATCCATGACGACATTGAAAA...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296088.12
CDS-3UTR CCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGCACTCTTTAGACACATaGGATGGTACTGTATATTTG +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMHSLDT*DGTVYL
Trigger: CAAATATACAGTACCATCCCATGTGTCTAAAGAGTG...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTAATAGGCTTTTCGGCTaGGAAAGAAAAGTGTCTAGC +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFNRLFG*ERKVSS
Trigger: GCTAGACACTTTTCTTTCCCAGCCGAAAAGCCTATT...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGGGTATGTTCAACTGTaGTTTAAGGTTCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKGYVQL*FKVLSA
Trigger: TGCACTGAGAACCTTAAACCACAGTTGAACATACCC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGAGCAAATATGTTCTATaGCTTCACCCACACATCTAT +
Preference number: 4 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMSKYVL*LHPHIY
Trigger: ATAGATGTGTGGGTGAAGCCATAGAACATATTTGCT...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGAAATCAACCAGCATTaGAAGCAACTGACCAAATCA +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINEINQH*KQLTKS
Trigger: TGATTTGGTCAGTTGCTTCCAATGCTGGTTGATTTC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGAATGCCACAACAGATaGTTATCTGGTCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNECHNR*LSGQKQ
Trigger: CTGTTTTTGACCAGATAATCATCTGTTGTGGCATTC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGAATATCTACTGCAGGTaGATCATACTCATCACCAAG +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKNIYCR*IILITK
Trigger: CTTGGTGATGAGTATGATGCACCTGCAGTAGATATT...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR GCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTACTCCAAATATCTACTaGAGGTGCATCATACTCATC +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFTPNIY*RCIILI
Trigger: GATGAGTATGATGCACCTGCAGTAGATATTTGGAGT...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTATTCATCTTTAACCTaGTCAACTTGGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKYSSLT*STWEAD
Trigger: ATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR GCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCACTACAGGGGAAGCTaGCTTATAAATCTAAGTACT +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKHYRGS*LINLST
Trigger: AGTACTTAGATTTATAAGGCAGCTTCCCCTGTAGTG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR GCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGGGTTAGTTAAAAGGTaGCATTCCAAGGCTATACAT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNGLVKR*HSKAIH
Trigger: ATGTATAGCCTTGGAATGGCACCTTTTAACTAACCC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTAGTGAGCTTCTTCCCTaGTTGAAATTTGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFSELLP*LKFVAE
Trigger: TTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACT...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGAAATCAACCAGCATTaGAAGCAACTGACCAAATCA +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNEINQH*KQLTKS
Trigger: TGATTTGGTCAGTTGCTTCCAATGCTGGTTGATTTC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR TCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTCAATGTTTACACAATaGGGGAAATCAACCAGCATT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNSMFTQ*GKSTSI
Trigger: AATGCTGGTTGATTTCCCTCATTGTGTAAACATTGA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTTTTCAATGTCGTCATaGATATCCTGCAAACTGCAT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNFSMSS*ISCKLH
Trigger: ATGCAGTTTGCAGGATATCCATGACGACATTGAAAA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000454177.5
CDS-3UTR CCA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTTTAGACACATGGGATaGTACTGTATATTTGCAATC +
Preference number: 4 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINFRHMG*YCIFAI
Trigger: GATTGCAAATATACAGTACCATCCCATGTGTCTAAA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTCACGTAGATTTCTCTTaGACTTTCACACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFHVDFS*TFTLEN
Trigger: ATTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTG...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCACGTAGATTTCTCTTaGACTTTCACACTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNHVDFS*TFTLEN
Trigger: ATTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
3UTR CAA 72 bp AGGGGTACAAGTAACTGTTTAGAGCAAGTAAGTAGTTaGGTCCAATATTATCTTAATGTAATGGTTTTTCGC +
Preference number: 4 (lower is better)
Translates to: RGTSNCLEQVSS*VQYYLNVMVFR
Trigger: GCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACTTACTTGCTCTAAACAGTTACTTGTACCCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CCA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTTTAGACACATGGGATaGTACTGTATATTTGCAATC +
Preference number: 4 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKFRHMG*YCIFAI
Trigger: GATTGCAAATATACAGTACCATCCCATGTGTCTAAA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CCA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTTTGTGAACTGTACCTaGAGAAGCTATATTCATCTT +
Preference number: 4 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNFVNCT*RSYIHL
Trigger: AAGATGAATATAGCTTCTCCAGGTACAGTTCACAAA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 90 bp AGTTGCTGGGGCCGGCACAGCGGCGTGTGGTACCCGATGTATTGGTaGGGTTGCCACCCGAGCCGCTGGAGGGACTGCCCCCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: SCWGRHSGVWYPMYW*GCHPSRWRDCPHQH
Trigger: ATGCTGGTGGGGGCAGTCCCTCCAGCGGCTCGGGTGGCAACCCCACCAATACATCGGGTACCACACGCCGCTGTGCCGGCCCCAGCAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 90 bp CACCCGAGCCGCTGGAGGGACTGCCCCCACCAGCATTGTTCTCACTaGGGCTGGCCTTGTCCACCCCTCCACTGGCATTGCTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: HPSRWRDCPHQHCSH*GWPCPPLHWHCLAC
Trigger: GCAAGCCAAGCAATGCCAGTGGAGGGGTGGACAAGGCCAGCCCCAGTGAGAACAATGCTGGTGGGGGCAGTCCCTCCAGCGGCTCGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCACTCCACTGGCATTGCTaGGCTTGCTCTGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: EPVFTALSRKRASGQMGPLHWHC*ACSGPR
Trigger: GCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAG...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp AGTTTGAGGCTCTCAACGAGCTCCCCAGCACTGCGAGAGGCCAGCTaGATGGAGTTGCTGGGGCCGGCACAGCGGCGTGTGGTACCCGAT +
Preference number: 5 (lower is better)
Translates to: SLRLSTSSPALREAS*MELLGPAQRRVVPD
Trigger: ATCGGGTACCACACGCCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGGCCTCTCGCAGTGCTGGGGAGCTCGTTGAGAGCCTCAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 90 bp CTCCTGTGGCCATTGAGGACACTGTCAGCAGCCCGAGCAGGAGACTaGGGGACAGTCGCGTGGGACAAAGGAGTGGCCGTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: LLWPLRTLSAARAGD*GTVAWDKGVAVRSS
Trigger: GGATGACCTCACGGCCACTCCTTTGTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGCTGCTGACAGTGTCCTCAATGGCCACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000481892.1
CDS TCA 90 bp TGCCAGGGGGCCCCTCGCTGCTATCCCGTCGGTGCCAGGAGTAGGTaGACCCGCTATCTTTATCGAGCCGCCGCCGGCTTTCAGAATCAT +
Preference number: 5 (lower is better)
Translates to: CQGAPRCYPVGARSR*TRYLYRAAAGFQNH
Trigger: ATGATTCTGAAAGCCGGCGGCGGCTCGATAAAGATAGCGGGTTCACCTACTCCTGGCACCGACGGGATAGCAGCGAGGGGCCCCCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp GCCGCCGCCGGCTTTCAGAATCATCATCACTGGTCTCCGAACTACTaGAGCTGGAGCCCCGGCCCTGACTTTTCCTCCGGTGGTAGCGTT +
Preference number: 5 (lower is better)
Translates to: AAAGFQNHHHWSPNY*SWSPGPDFSSGGSV
Trigger: AACGCTACCACCGGAGGAAAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAAGCCGGCGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAGCCGGTCTTCACTGCTCTGAGCAGGAAGCGTGCTAGCGGCCAGATGGGGCCATCCTCAAAGATCTGGTaGAGGACGGGCGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: EPVFTALSRKRASGQMGPSSKIW*RTGALF
Trigger: GAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGA...TGGCCCCATCTGGCCGCTAGCACGCTTCCTGCTCAGAGCAGTGAAGACCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGCCAGCTGCATGGAGTaGCTGGGGCCGGCACAGCGG +
Preference number: 5 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSASCME*LGPAQR
Trigger: CCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGGC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS GCA 90 bp TCACCGGAGAGTCCCACGGCCCAGGGGGTGGATAGATGCAGTCACTaGAAGAAGTGGAGGCAGAGCTTCAATAAATCCAGGCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SPESPTAQGVDRCSH*KKWRQSFNKSRPAD
Trigger: GTCAGCTGGCCTGGATTTATTGAAGCTCTGCCTCCACTTCTTGCAGTGACTGCATCTATCCACCCCCTGGGCCGTGGGACTCTCCGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS CCA 90 bp CGCTATCTTTATCGAGCCGCCGCCGGCTTTCAGAATCATCATCACTaGTCTCCGAACTACTGCAGCTGGAGCCCCGGCCCTGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: RYLYRAAAGFQNHHH*SPNYCSWSPGPDFS
Trigger: GGAAAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAAGCCGGCGGCGGCTCGATAAAGATAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCACCTGGCATTGCTTGGCTaGCTCTGGCCCCCGCCATCC +
Preference number: 5 (lower is better)
Translates to: VLSQTPESVSQSLGFPHHLALLG*LWPPPS
Trigger: GGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCAG...GTGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCATCACTGGGGCTGGCCTaGTCCACCCCTCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSSLGLA*STPPLA
Trigger: TGCCAGTGGAGGGGTGGACAAGGCCAGCCCCAGTGA...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGGCCAGCTGCATGGAGTaGCTGGGGCCGGCACAGCGG +
Preference number: 5 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKASCME*LGPAQR
Trigger: CCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGGC...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS CCA 90 bp GTCGCGTGGGACAAAGGAGTGGCCGTGAGGTCATCCTCAAGGTCCTaGGGTACATCAATTTTGGTTGGCCATGACTGCCTAAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: VAWDKGVAVRSSSRS*GTSILVGHDCLNWA
Trigger: GGCCCAGTTTAGGCAGTCATGGCCAACCAAAATTGATGTACCCCAGGACCTTGAGGATGACCTCACGGCCACTCCTTTGTCCCACGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000481892.1
CDS CCA 90 bp GCCGGCTTTCAGAATCATCATCACTGGTCTCCGAACTACTGCAGCTaGAGCCCCGGCCCTGACTTTTCCTCCGGTGGTAGCGTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: AGFQNHHHWSPNYCS*SPGPDFSSGGSVCE
Trigger: TTCACAAACGCTACCACCGGAGGAAAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAAGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGATGTATTGGTGGGGTaGCCACCCGAGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSDVLVG*PPEPLE
Trigger: CTCCAGCGGCTCGGGTGGCAACCCCACCAATACATC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAGCCAGCTGCATGGAGTaGCTGGGGCCGGCACAGCGG +
Preference number: 5 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTASCME*LGPAQR
Trigger: CCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGGC...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp CTCCTGTTTTCACCGGAGAGTCCCACGGCCCAGGGGGTGGATAGATaGAGTCACTGCAAGAAGTGGAGGCAGAGCTTCAATAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: LLFSPESPTAQGVDR*SHCKKWRQSFNKSR
Trigger: CCTGGATTTATTGAAGCTCTGCCTCCACTTCTTGCAGTGACTGCATCTATCCACCCCCTGGGCCGTGGGACTCTCCGGTGAAAACAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS GCA 90 bp ACAGGACTGGTTGGTGAATCTGGTGGAGCCATCAGTCCTCAGAAATaGAAAAACTCCTGTTTTCACCGGAGAGTCCCACGGCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: TGLVGESGGAISPQK*KNSCFHRRVPRPRG
Trigger: CCCCCTGGGCCGTGGGACTCTCCGGTGAAAACAGGAGTTTTTGCATTTCTGAGGACTGATGGCTCCACCAGATTCACCAACCAGTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS CCA 90 bp AGTCCCACGGCCCAGGGGGTGGATAGATGCAGTCACTGCAAGAAGTaGAGGCAGAGCTTCAATAAATCCAGGCCAGCTGACCCTCTAAAC +
Preference number: 5 (lower is better)
Translates to: SPTAQGVDRCSHCKK*RQSFNKSRPADPLN
Trigger: GTTTAGAGGGTCAGCTGGCCTGGATTTATTGAAGCTCTGCCTCCACTTCTTGCAGTGACTGCATCTATCCACCCCCTGGGCCGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS-3UTR CAA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACCTCCACTGGCATTGCTaGGCTTGCTCTGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: KVSSSMHKDHALSHHQANLHWHC*ACSGPR
Trigger: GCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAG...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACTCACTGGGGCTGGCCTaGTCCACCCCTCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: KVSSSMHKDHALSHHQANSLGLA*STPPLA
Trigger: TGCCAGTGGAGGGGTGGACAAGGCCAGCCCCAGTGA...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 90 bp CCATGTCAAACTCATCGTCAGATTCCCCTTCCTCAAAGATCTGGTTaGGGACGGGCGCACTCTTCCTGGATGTCAGGCGGTTGGTTACAG +
Preference number: 5 (lower is better)
Translates to: PCQTHRQIPLPQRSG*GRAHSSWMSGGWLQ
Trigger: CTGTAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGGAATCTGACGATGAGTTTGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 90 bp AAGCTCCACCTCCAGGGTTCACGCCATTCTCCCGCCTCAGCCTCCTaGGTAGCTGGAACTACAGGCGCCCAGGTAATTTTCTGTATTTTT +
Preference number: 5 (lower is better)
Translates to: KLHLQGSRHSPASAS*VAGTTGAQVIFCIF
Trigger: AAAAATACAGAAAATTACCTGGGCGCCTGTAGTTCCAGCTACTCAGGAGGCTGAGGCGGGAGAATGGCGTGAACCCTGGAGGTGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462810.1
CDS-3UTR CAA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACTGCCTAAACTGGGCCTaGATATTGCTCGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDCLNWA*ILLGLA
Trigger: TGCAAGCCCGAGCAATATCAAGGCCCAGTTTAGGCA...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACCCCTCCACTGGCATaGCTTGGCTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: KVSSSMHKDHALSHHQANTPPLA*LGLLWP
Trigger: GGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGGT...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp GCCATGTGGTCAGAGAAAAACTTTATGCCGCCCACTGCAGGGACCTaGCCTGCATTCCCTGTGGAGCTAATGCACATTTTCCACGTAGAT +
Preference number: 5 (lower is better)
Translates to: AMWSEKNFMPPTAGT*PAFPVELMHIFHVD
Trigger: ATCTACGTGGAAAATGTGCATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp GGTGGTATCTGCCATGTGGTCAGAGAAAAACTTTATGCCGCCCACTaGAGGGACCTGCCCTGCATTCCCTGTGGAGCTAATGCACATTTT +
Preference number: 5 (lower is better)
Translates to: GGICHVVREKLYAAH*RDLPCIPCGANAHF
Trigger: AAAATGTGCATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 90 bp TCATCCATGTCAAACTCATCGTCAGATTCCCCTTCCTCAAAGATCTaGTTGAGGACGGGCGCACTCTTCCTGGATGTCAGGCGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSMSNSSSDSPSSKI*LRTGALFLDVRRLV
Trigger: AACCAACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGGAATCTGACGATGAGTTTGACATGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGTTGCTCCTGTGGCCATaGAGGACACTGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKLLLWP*RTLSAA
Trigger: GGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCAA...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCTGGCATTGCTTGGCTaGCTCTGGCCCCCGCCATCC +
Preference number: 5 (lower is better)
Translates to: WERKVSSSMHKDHALSHHLALLG*LWPPPS
Trigger: GGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCAG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGCTCCACTGGCATTGCTaGGCTTGCTCTGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQLHWHC*ACSGPR
Trigger: GCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAG...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTCACTGGGGCTGGCCTaGTCCACCCCTCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRSLGLA*STPPLA
Trigger: TGCCAGTGGAGGGGTGGACAAGGCCAGCCCCAGTGA...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAGTGGTACCCGATGTATaGGTGGGGTTGCCACCCGAG +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRVVPDV*VGLPPE
Trigger: CTCGGGTGGCAACCCCACCAATACATCGGGTACCAC...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACGAGCTTCTTCCCTGGTaGAAATTTGTTGCTGAACCC +
Preference number: 5 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDELLPW*KFVAEP
Trigger: GGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTC...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTTGCTCCTGTGGCCATaGAGGACACTGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSSMHKDHALSHHQANKWLLLWP*RTLSAA
Trigger: GGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCAA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACTGGATGTCAGGCGGTaGGTTACAGATGGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRLDVRR*VTDGFR
Trigger: CCGGAAGCCATCTGTAACCAACCGCCTGACATCCAG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGACCCCTCCACTGGCATaGCTTGGCTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRTPPLA*LGLLWP
Trigger: GGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGGT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGATGTATTGGTGGGGTaGCCACCCGAGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQDVLVG*PPEPLE
Trigger: CTCCAGCGGCTCGGGTGGCAACCCCACCAATACATC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGGTGGTACCCGATGTATaGGTGGGGTTGCCACCCGAG +
Preference number: 5 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLVVPDV*VGLPPE
Trigger: CTCGGGTGGCAACCCCACCAATACATCGGGTACCAC...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGCCAGCTGCATGGAGTaGCTGGGGCCGGCACAGCGG +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINASCME*LGPAQR
Trigger: CCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGGC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 90 bp CAATGGCGTCTCGATCCGCTATGTCCCCAAGCACCATGCGCTGAATaGTGCTGTTGTGCTCCTCTTCCGAGAGATTTTTGTATGACACAA +
Preference number: 5 (lower is better)
Translates to: QWRLDPLCPQAPCAE*CCCAPLPRDFCMTQ
Trigger: TTGTGTCATACAAAAATCTCTCGGAAGAGGAGCACAACAGCATCATTCAGCGCATGGTGCTTGGGGACATAGCGGATCGAGACGCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000484791.1
CDS TCA 90 bp TCTACAATGGCGTCTCGATCCGCTATGTCCCCAAGCACCATGCGCTaGATGATGCTGTTGTGCTCCTCTTCCGAGAGATTTTTGTATGAC +
Preference number: 5 (lower is better)
Translates to: STMASRSAMSPSTMR*MMLLCSSSERFLYD
Trigger: GTCATACAAAAATCTCTCGGAAGAGGAGCACAACAGCATCATTCAGCGCATGGTGCTTGGGGACATAGCGGATCGAGACGCCATTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000484791.1
CDS TCA 90 bp AATGACAAGCCATTCTGTGGATCAATAATGTACTTGGTGCTCCCATaGAGCTGGGAGCCGAGGCAGAGGCTCATGAGTTTGAGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: NDKPFCGSIMYLVLP*SWEPRQRLMSLRLS
Trigger: TGAGAGCCTCAAACTCATGAGCCTCTGCCTCGGCTCCCAGCTTCATGGGAGCACCAAGTACATTATTGATCCACAGAATGGCTTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 90 bp TTCTTGCTCTTTATCCGTTCCAATTCAGTGGTGGTATCTGCCATGTaGTCAGAGAAAAACTTTATGCCGCCCACTGCAGGGACCTGCCCT +
Preference number: 5 (lower is better)
Translates to: FLLFIRSNSVVVSAM*SEKNFMPPTAGTCP
Trigger: AGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACTGTCATTGGCTTCTaGAAAGGGCGGCTGCCCACA +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRTVIGF*KGRLPT
Trigger: TGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGT...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGACTGTCATTGGCTTCTaGAAAGGGCGGCTGCCCACA +
Preference number: 5 (lower is better)
Translates to: SSSMHKDHALSHHQANKWTVIGF*KGRLPT
Trigger: TGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGT...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAAAAGAAGCCCTTCTCTaGGGATCTCTCTGTAGCATC +
Preference number: 5 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSKEALL*GSLCSI
Trigger: GATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTTT...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATTGCTCCTGTGGCCATaGAGGACACTGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVLLLWP*RTLSAA
Trigger: GGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCAA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTACTGGATGTCAGGCGGTaGGTTACAGATGGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVLDVRR*VTDGFR
Trigger: CCGGAAGCCATCTGTAACCAACCGCCTGACATCCAG...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATCCTCAAAGATCTGGTaGAGGACGGGCGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTSSKIW*RTGALF
Trigger: GAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCACCCCTCCACTGGCATaGCTTGGCTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LALYKIPAQEFQANMFYGTPPLA*LGLLWP
Trigger: GGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGGT...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGTGGTACCCGATGTATaGGTGGGGTTGCCACCCGAG +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQVVPDV*VGLPPE
Trigger: CTCGGGTGGCAACCCCACCAATACATCGGGTACCAC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACAGAGGCTCATGAGTTaGAGGCTCTCAACGAGCTCC +
Preference number: 5 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTQRLMS*RLSTSS
Trigger: GGAGCTCGTTGAGAGCCTCAAACTCATGAGCCTCTG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACCAGAGGCTCATGAGTTaGAGGCTCTCAACGAGCTCC +
Preference number: 5 (lower is better)
Translates to: KVSSSMHKDHALSHHQANQRLMS*RLSTSS
Trigger: GGAGCTCGTTGAGAGCCTCAAACTCATGAGCCTCTG...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAAACTGGGCCTTGATATaGCTCGGGCTTGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRNWALI*LGLADL
Trigger: CAGATCTGCAAGCCCGAGCAATATCAAGGCCCAGTT...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAACTGGGCCTTGATATaGCTCGGGCTTGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: KVSSSMHKDHALSHHQANNWALI*LGLADL
Trigger: CAGATCTGCAAGCCCGAGCAATATCAAGGCCCAGTT...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCTCCACTGGCATTGCTaGGCTTGCTCTGGCCCCCGC +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINLHWHC*ACSGPR
Trigger: GCGGGGGCCAGAGCAAGCCAAGCAATGCCAGTGGAG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATTCACTGGGGCTGGCCTaGTCCACCCCTCCACTGGCA +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINSLGLA*STPPLA
Trigger: TGCCAGTGGAGGGGTGGACAAGGCCAGCCCCAGTGA...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp CTGGCTCCAGGCCTGTGGGCATCACAACGTTATTGCTTTGGTTCTGTCTCAGACGTTACGAAGCAGGCTTaGTGCATTTTTGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: LAPGLWASQRYCFGSVSDVTKQA*CIFVCC
Trigger: ACAGCAAACAAAAATGCACAAAGCCTGCTTCGTAAC...GTCTGAGACAGAACCAAAGCAATAACGTTGTGATGCCCACAGGCCTGGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGCAGCAATGCAGTTCTTaGGTGATGTGCCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKQQCSS*VMCPLS
Trigger: AGAGAGTGGGCACATCACCAAAGAACTGCATTGCTG...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS GCA 90 bp TTTCAGGTTCTTGCTCTTTATCCGTTCCAATTCAGTGGTGGTATCTaGCATGTGGTCAGAGAAAAACTTTATGCCGCCCACTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: FQVLALYPFQFSGGI*HVVREKLYAAHCRD
Trigger: GTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTCCTCAAAGATCTGGTaGAGGACGGGCGCACTCTTC +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQSSKIW*RTGALF
Trigger: GAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATCTGGCATTGCTTGGCTaGCTCTGGCCCCCGCCATCC +
Preference number: 5 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNLALLG*LWPPPS
Trigger: GGATGGCGGGGGCCAGAGCAAGCCAAGCAATGCCAG...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGGTGGTACCCGATGTATaGGTGGGGTTGCCACCCGAG +
Preference number: 5 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMVVPDV*VGLPPE
Trigger: CTCGGGTGGCAACCCCACCAATACATCGGGTACCAC...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACACAGCAATGCAGTTCTTaGGTGATGTGCCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTQQCSS*VMCPLS
Trigger: AGAGAGTGGGCACATCACCAAAGAACTGCATTGCTG...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAGTGTCCAGTTTTGTCTaGTCAATAACTTTTACTGCC +
Preference number: 5 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSVSSFV*SITFTA
Trigger: GGCAGTAAAAGTTATTGACAAGACAAAACTGGACAC...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCACTGTCATTGGCTTCTaGAAAGGGCGGCTGCCCACA +
Preference number: 5 (lower is better)
Translates to: LALYKIPAQEFQANMFYGTVIGF*KGRLPT
Trigger: TGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGT...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAACTGGGCCTTGATATaGCTCGGGCTTGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRNWALI*LGLADL
Trigger: CAGATCTGCAAGCCCGAGCAATATCAAGGCCCAGTT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTGCCTAAACTGGGCCTaGATATTGCTCGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQCLNWA*ILLGLA
Trigger: TGCAAGCCCGAGCAATATCAAGGCCCAGTTTAGGCA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGTGGGGTACATCAATTTaGGTTGGCCATGACTGCCTA +
Preference number: 5 (lower is better)
Translates to: SSSMHKDHALSHHQANKWWGTSI*VGHDCL
Trigger: TAGGCAGTCATGGCCAACCAAAATTGATGTACCCCA...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AGAGCCCAAACTTTGTTTTTACACTATAGCTTAAGACAAACAGGTGTGGGTATGTTGCTCCTGTGGCCATaGAGGACACTGTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: RAQTLFLHYSLRQTGVGMLLLWP*RTLSAA
Trigger: GGCTGCTGACAGTGTCCTCAATGGCCACAGGAGCAA...CATACCCACACCTGTTTGTCTTAAGCTATAGTGTAAAAACAAAGTTTGGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AGTGTCCTACAAGATAGAATGCCACAACAGATGATTATCTGGTCAAAAACAGTCCTGGATGTCAGGCGGTaGGTTACAGATGGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SVLQDRMPQQMIIWSKTVLDVRR*VTDGFR
Trigger: CCGGAAGCCATCTGTAACCAACCGCCTGACATCCAG...GACTGTTTTTGACCAGATAATCATCTGTTGTGGCATTCTATCTTGTAGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACATTTAACCTGCTCAACTaGGGAGGCAGATTCTCATCC +
Preference number: 5 (lower is better)
Translates to: KCLAACTKTMHCHIIRRTFNLLN*GGRFSS
Trigger: GGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAA...TGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGACCCCTCCACTGGCATaGCTTGGCTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKTPPLA*LGLLWP
Trigger: GGGCCAGAGCAAGCCAAGCAATGCCAGTGGAGGGGT...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGGATGTATTGGTGGGGTaGCCACCCGAGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKDVLVG*PPEPLE
Trigger: CTCCAGCGGCTCGGGTGGCAACCCCACCAATACATC...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATGATGTATTGGTGGGGTaGCCACCCGAGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNDVLVG*PPEPLE
Trigger: CTCCAGCGGCTCGGGTGGCAACCCCACCAATACATC...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGACACAAAGACCATGCATaGTCACATCATCAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRHKDHA*SHHQAN
Trigger: GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTG...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp AGGTGCATCATACTCATCACCAAGCAGAATTTCTGGAGCGGAATATaGAAGAGATCCACAGCTTGTAGTGAGCTTCTTCCCTGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: RCIILITKQNFWSGI*KRSTACSELLPWLK
Trigger: TTTCAACCAGGGAAGAAGCTCACTACAAGCTGTGGATCTCTTGCATATTCCGCTCCAGAAATTCTGCTTGGTGATGAGTATGATGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS GCA 90 bp TCTTTTCGCACAGAGGTAGCTGCAGCACGTTATTTTTCAGGTTCTTaGTCTTTATCCGTTCCAATTCAGTGGTGGTATCTGCCATGTGGT +
Preference number: 5 (lower is better)
Translates to: SFRTEVAAARYFSGS*SLSVPIQWWYLPCG
Trigger: ACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 90 bp TTCCGCTGGATGTTCACAGAGATGGTCTTTTCGCACAGAGGTAGCTaGAGCACGTTATTTTTCAGGTTCTTGCTCTTTATCCGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: FRWMFTEMVFSHRGS*STLFFRFLLFIRSN
Trigger: ATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGAAAAGACCATCTCTGTGAACATCCAGCGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAAAAGAAGCCCTTCTCTaGGGATCTCTCTGTAGCATC +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVKEALL*GSLCSI
Trigger: GATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTTT...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGCCACGTAGATTTCTCTaGGACTTTCACACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKPRRFL*DFHTGK
Trigger: TTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTGG...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTACACAAAGACCATGCATaGTCACATCATCAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVHKDHA*SHHQAN
Trigger: GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTG...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCACAACGTTATTGCTTaGGTTCTGTCTCAGACACCA +
Preference number: 5 (lower is better)
Translates to: SSSMHKDHALSHHQANKWHNVIA*VLSQTP
Trigger: TGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAGGCATCACAACGTTATaGCTTTGGTTCTGTCTCAGA +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRGITTL*LWFCLR
Trigger: TCTGAGACAGAACCAAAGCAATAACGTTGTGATGCC...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp TGGAAATCCTGCAGTGTGCCCTACAGGAAGGAATTTACACAGAGCATCTTTTTGCATGGGGTTTTGACTTaGCCAACATTTGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: WKSCSVPYRKEFTQSIFLHGVLT*PTFVCT
Trigger: GGTGCACACAAATGTTGGCAAAGTCAAAACCCCATG...CAAAAAGATGCTCTGTGTAAATTCCTTCCTGTAGGGCACACTGCAGGATTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGTTCTGTCTCAGACACCAGAGAGTGTGTCTCAGAGCCTAGGGTTTCCACATCAAAGTATTTACACTGCTaGGAAAACAGCTGCAACAAA +
Preference number: 5 (lower is better)
Translates to: GSVSDTRECVSEPRVSTSKYLHC*ENSCNK
Trigger: TTTGTTGCAGCTGTTTTCCAAGCAGTGTAAATACTT...TGATGTGGAAACCCTAGGCTCTGAGACACACTCTCTGGTGTCTGAGACAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAGGAAATCAACCAGCATaGGAAGCAACTGACCAAATC +
Preference number: 5 (lower is better)
Translates to: EKCLAACTKTMHCHIIRRGNQPA*EATDQI
Trigger: GATTTGGTCAGTTGCTTCCAATGCTGGTTGATTTCC...TCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS CCA 90 bp CGTTATTTTTCAGGTTCTTGCTCTTTATCCGTTCCAATTCAGTGGTaGTATCTGCCATGTGGTCAGAGAAAAACTTTATGCCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: RYFSGSCSLSVPIQW*YLPCGQRKTLCRPL
Trigger: CAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 90 bp GCACGTTATTTTTCAGGTTCTTGCTCTTTATCCGTTCCAATTCAGTaGTGGTATCTGCCATGTGGTCAGAGAAAAACTTTATGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: ARYFSGSCSLSVPIQ*WYLPCGQRKTLCRP
Trigger: TGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGAGCTTCTTCCCTGGTaGAAATTTGTTGCTGAACCC +
Preference number: 5 (lower is better)
Translates to: WERKVSSSMHKDHALSHHELLPW*KFVAEP
Trigger: GGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATACTGTCATTGGCTTCTaGAAAGGGCGGCTGCCCACA +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINTVIGF*KGRLPT
Trigger: TGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGT...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGAAAGAAGCCCTTCTCTaGGGATCTCTCTGTAGCATC +
Preference number: 5 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRKEALL*GSLCSI
Trigger: GATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTTT...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACTCTTCCGAGAGATTTTaGTATGACACAAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: KVSSSMHKDHALSHHQANSSERF*YDTRGM
Trigger: CATTCCCCTTGTGTCATACAAAAATCTCTCGGAAGA...GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATTGGGGTACATCAATTTaGGTTGGCCATGACTGCCTA +
Preference number: 5 (lower is better)
Translates to: WERKVSSSMHKDHALSHHWGTSI*VGHDCL
Trigger: TAGGCAGTCATGGCCAACCAAAATTGATGTACCCCA...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGTGGGGTACATCAATTTaGGTTGGCCATGACTGCCTA +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQWGTSI*VGHDCL
Trigger: TAGGCAGTCATGGCCAACCAAAATTGATGTACCCCA...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCTGGATGTCAGGCGGTaGGTTACAGATGGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKLDVRR*VTDGFR
Trigger: CCGGAAGCCATCTGTAACCAACCGCCTGACATCCAG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATCAGAGGCTCATGAGTTaGAGGCTCTCAACGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINQRLMS*RLSTSS
Trigger: GGAGCTCGTTGAGAGCCTCAAACTCATGAGCCTCTG...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGCCACGTAGATTTCTCTaGGACTTTCACACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SSSMHKDHALSHHQANKWPRRFL*DFHTGK
Trigger: TTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTGG...CCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTACACAACGTTATTGCTTaGGTTCTGTCTCAGACACCA +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVHNVIA*VLSQTP
Trigger: TGGTGTCTGAGACAGAACCAAAGCAATAACGTTGTG...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS GCA 90 bp AGCGTTTGTGAACTGTACCTGGAGAAGCTATATTCATCTTTAACCTaGTCAACTTGGGAGGCAGATTCTCATCCATGTCAAACTCATCGT +
Preference number: 5 (lower is better)
Translates to: SVCELYLEKLYSSLT*STWEADSHPCQTHR
Trigger: ACGATGAGTTTGACATGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATATAGCTTCTCCAGGTACAGTTCACAAACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 90 bp AGCGGAATATGCAAGAGATCCACAGCTTGTAGTGAGCTTCTTCCCTaGTTGAAATTTGTTGCTGAACCCAAAGTCTGTCAACTTTACAAG +
Preference number: 5 (lower is better)
Translates to: SGICKRSTACSELLP*LKFVAEPKVCQLYK
Trigger: CTTGTAAAGTTGACAGACTTTGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACAAGCTGTGGATCTCTTGCATATTCCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS CCA 90 bp CCTGGGCCAAGAACTTTAGAGATAAATGACACAACTCTTGCCAACTaGGAACTCTTATCTATTACACAGGTGTCCAAAGGCTGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: PGPRTLEINDTTLAN*ELLSITQVSKGCVK
Trigger: CTTAACACAGCCTTTGGACACCTGTGTAATAGATAAGAGTTCCCAGTTGGCAAGAGTTGTGTCATTTATCTCTAAAGTTCTTGGCCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484791.1
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATCTTCCGAGAGATTTTaGTATGACACAAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSSERF*YDTRGM
Trigger: CATTCCCCTTGTGTCATACAAAAATCTCTCGGAAGA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAACTGGGCCTTGATATaGCTCGGGCTTGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINNWALI*LGLADL
Trigger: CAGATCTGCAAGCCCGAGCAATATCAAGGCCCAGTT...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCTGGGGTACATCAATTTaGGTTGGCCATGACTGCCTA +
Preference number: 5 (lower is better)
Translates to: LALYKIPAQEFQANMFYGWGTSI*VGHDCL
Trigger: TAGGCAGTCATGGCCAACCAAAATTGATGTACCCCA...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCCACAAAGACCATGCATaGTCACATCATCAGGCGAAC +
Preference number: 5 (lower is better)
Translates to: LALYKIPAQEFQANMFYGHKDHA*SHHQAN
Trigger: GTTCGCCTGATGATGTGACAATGCATGGTCTTTGTG...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAGTTACGAAGCAGGCTTaGTGCATTTTTGTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVVTKQA*CIFVCC
Trigger: ACAGCAAACAAAAATGCACAAAGCCTGCTTCGTAAC...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGGGTCAAAAACAGTCTTaGTACAGGAATAGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKGQKQS*YRNRLK
Trigger: CTTTAACCTATTCCTGTACAAAGACTGTTTTTGACC...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GGCCCTATAGTTCTTCTATCTACATGGAAATCCTGCAGTGTGCCCTACAGGAAGTCCATAATCAGCAATTaGCAATATACAGTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: GPIVLLSTWKSCSVPYRKSIISN*QYTVSY
Trigger: GTAGGACACTGTATATTGCAAATTGCTGATTATGGA...CTTCCTGTAGGGCACACTGCAGGATTTCCATGTAGATAGAAGAACTATAGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp GAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGAAATCAACCAGCATaGGAAGCAACTGACCAAATC +
Preference number: 5 (lower is better)
Translates to: ERKVSSSMHKDHALSHHQGNQPA*EATDQI
Trigger: GATTTGGTCAGTTGCTTCCAATGCTGGTTGATTTCC...CTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS TCA 90 bp GAATATGCAAGAGATCCACAGCTTGTAGTGAGCTTCTTCCCTGGTTaGAATTTGTTGCTGAACCCAAAGTCTGTCAACTTTACAAGACCT +
Preference number: 5 (lower is better)
Translates to: EYARDPQLVVSFFPG*NLLLNPKSVNFTRP
Trigger: AGGTCTTGTAAAGTTGACAGACTTTGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACAAGCTGTGGATCTCTTGCATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTGCCTAAACTGGGCCTaGATATTGCTCGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKCLNWA*ILLGLA
Trigger: TGCAAGCCCGAGCAATATCAAGGCCCAGTTTAGGCA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTGCCTAAACTGGGCCTaGATATTGCTCGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNCLNWA*ILLGLA
Trigger: TGCAAGCCCGAGCAATATCAAGGCCCAGTTTAGGCA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCCACGTAGATTTCTCTaGGACTTTCACACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: WERKVSSSMHKDHALSHHPRRFL*DFHTGK
Trigger: TTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTGG...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp CTGGCCCTTTATAAGATCCCTGCTCAAGAATTTCAAGCAAATATGTTCTATGGCGGCATCACAACGTTATaGCTTTGGTTCTGTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LALYKIPAQEFQANMFYGGITTL*LWFCLR
Trigger: TCTGAGACAGAACCAAAGCAATAACGTTGTGATGCC...GCCATAGAACATATTTGCTTGAAATTCTTGAGCAGGGATCTTATAAAGGGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp TGGGAAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATGTGTCCAGTTTTGTCTaGTCAATAACTTTTACTGCC +
Preference number: 5 (lower is better)
Translates to: WERKVSSSMHKDHALSHHVSSFV*SITFTA
Trigger: GGCAGTAAAAGTTATTGACAAGACAAAACTGGACAC...ATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
CDS-3UTR CAA 90 bp GCATGCACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTATCCATAATCAGCAATTaGCAATATACAGTGTCCTAC +
Preference number: 5 (lower is better)
Translates to: ACTKTMHCHIIRRTNGKVSIISN*QYTVSY
Trigger: GTAGGACACTGTATATTGCAAATTGCTGATTATGGA...TACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGTGCATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS CCA 90 bp CTCTGTAGCATCCGTGTGATTAGGTCTTTACACTCTTTAGACACATaGGATGGTACTGTATATTTGCAATCCATGATCATTGTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LCSIRVIRSLHSLDT*DGTVYLQSMIIVSV
Trigger: AACACTGACAATGATCATGGATTGCAAATATACAGTACCATCCCATGTGTCTAAAGAGTGTAAAGACCTAATCACACGGATGCTACAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000484791.1
CDS-3UTR CAA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTGAGCTTCTTCCCTGGTaGAAATTTGTTGCTGAACCC +
Preference number: 5 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFELLPW*KFVAEP
Trigger: GGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTC...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAAGAAAAGTGTCTAGCAGCATGCACAAAGACCATGCATTGTCACATCATCAGGGATGGTACTGTATATTaGCAATCCATGATCATTGTC +
Preference number: 5 (lower is better)
Translates to: KEKCLAACTKTMHCHIIRDGTVY*QSMIIV
Trigger: GACAATGATCATGGATTGCAAATATACAGTACCATC...CCTGATGATGTGACAATGCATGGTCTTTGTGCATGCTGCTAGACACTTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGAAAGAAGCCCTTCTCTaGGGATCTCTCTGTAGCATC +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKKEALL*GSLCSI
Trigger: GATGCTACAGAGAGATCCCAAGAGAAGGGCTTCTTT...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGTTTAACCTGCTCAACTaGGGAGGCAGATTCTCATCC +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKFNLLN*GGRFSS
Trigger: GGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAA...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCATGGGGTTTTGACTTaGCCAACATTTGTGTGCACC +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKHGVLT*PTFVCT
Trigger: GGTGCACACAAATGTTGGCAAAGTCAAAACCCCATG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AGTAGTTTGGTCCAATATTATCTTAATGTAATGGTTTTTCGCTCCCTCCCTTTTTCTTCCGAGAGATTTTaGTATGACACAAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: SSLVQYYLNVMVFRSLPFSSERF*YDTRGM
Trigger: CATTCCCCTTGTGTCATACAAAAATCTCTCGGAAGA...AAAAGGGAGGGAGCGAAAAACCATTACATTAAGATAATATTGGACCAAACTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp AAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAATTCTTCCGAGAGATTTTaGTATGACACAAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: KTMHCHIIRRTNGKVINNSSERF*YDTRGM
Trigger: CATTCCCCTTGTGTCATACAAAAATCTCTCGGAAGA...ATTATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ATAATTGCTCCTAACGCCCACTTTAAAATAGTAAAACCAAATGGAACAGTGAAGCCACGTAGATTTCTCTaGGACTTTCACACTGGAAAA +
Preference number: 5 (lower is better)
Translates to: IIAPNAHFKIVKPNGTVKPRRFL*DFHTGK
Trigger: TTTTCCAGTGTGAAAGTCCAAGAGAAATCTACGTGG...CTTCACTGTTCCATTTGGTTTTACTATTTTAAAGTGGGCGTTAGGAGCAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGATGGTACTGTATATTaGCAATCCATGATCATTGTC +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINDGTVY*QSMIIV
Trigger: GACAATGATCATGGATTGCAAATATACAGTACCATC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATGGTCAAAAACAGTCTTaGTACAGGAATAGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINGQKQS*YRNRLK
Trigger: CTTTAACCTATTCCTGTACAAAGACTGTTTTTGACC...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS-3UTR CAA 90 bp ACAAAGACCATGCATTGTCACATCATCAGGCGAACAAATGGAAAGGTAATAAATAAGTATTTACACTGCTaGGAAAACAGCTGCAACAAA +
Preference number: 5 (lower is better)
Translates to: TKTMHCHIIRRTNGKVINKYLHC*ENSCNK
Trigger: TTTGTTGCAGCTGTTTTCCAAGCAGTGTAAATACTT...ATTTATTACCTTTCCATTTGTTCGCCTGATGATGTGACAATGCATGGTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296088.12
ENST00000429705.6
CDS CCA 72 bp GGCCGGCACAGCGGCGTGTGGTACCCGATGTATTGGTaGGGTTGCCACCCGAGCCGCTGGAGGGACTGCCCC +
Preference number: 6 (lower is better)
Translates to: GRHSGVWYPMYW*GCHPSRWRDCP
Trigger: GGGGCAGTCCCTCCAGCGGCTCGGGTGGCAACCCCACCAATACATCGGGTACCACACGCCGCTGTGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp GCTCCCCAGCACTGCGAGAGGCCAGCTGCATGGAGTTaGTGGGGCCGGCACAGCGGCGTGTGGTACCCGATG +
Preference number: 6 (lower is better)
Translates to: APQHCERPAAWS*WGRHSGVWYPM
Trigger: CATCGGGTACCACACGCCGCTGTGCCGGCCCCAGCAACTCCATGCAGCTGGCCTCTCGCAGTGCTGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp TGGGGCCGGCACAGCGGCGTGTGGTACCCGATGTATTaGTGGGGTTGCCACCCGAGCCGCTGGAGGGACTGC +
Preference number: 6 (lower is better)
Translates to: WGRHSGVWYPMY*WGCHPSRWRDC
Trigger: GCAGTCCCTCCAGCGGCTCGGGTGGCAACCCCACCAATACATCGGGTACCACACGCCGCTGTGCCGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 72 bp CTGGGGCCGGCACAGCGGCGTGTGGTACCCGATGTATaGGTGGGGTTGCCACCCGAGCCGCTGGAGGGACTG +
Preference number: 6 (lower is better)
Translates to: LGPAQRRVVPDV*VGLPPEPLEGL
Trigger: CAGTCCCTCCAGCGGCTCGGGTGGCAACCCCACCAATACATCGGGTACCACACGCCGCTGTGCCGGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp CACAGCGGCGTGTGGTACCCGATGTATTGGTGGGGTTaGCACCCGAGCCGCTGGAGGGACTGCCCCCACCAG +
Preference number: 6 (lower is better)
Translates to: HSGVWYPMYWWG*HPSRWRDCPHQ
Trigger: CTGGTGGGGGCAGTCCCTCCAGCGGCTCGGGTGGCAACCCCACCAATACATCGGGTACCACACGCCGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp CGCTGGAGGGACTGCCCCCACCAGCATTGTTCTCACTaGGGCTGGCCTTGTCCACCCCTCCACTGGCATTGC +
Preference number: 6 (lower is better)
Translates to: RWRDCPHQHCSH*GWPCPPLHWHC
Trigger: GCAATGCCAGTGGAGGGGTGGACAAGGCCAGCCCCAGTGAGAACAATGCTGGTGGGGGCAGTCCCTCCAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 72 bp GCCCCTCGCTGCTATCCCGTCGGTGCCAGGAGTAGGTaGACCCGCTATCTTTATCGAGCCGCCGCCGGCTTT +
Preference number: 6 (lower is better)
Translates to: APRCYPVGARSR*TRYLYRAAAGF
Trigger: AAAGCCGGCGGCGGCTCGATAAAGATAGCGGGTTCACCTACTCCTGGCACCGACGGGATAGCAGCGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp GTGCTAGCGGCCAGATGGGGCCACAGTCAGATGACATaGCAACAGCTGGCTGGGCTGGATGCGCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: VLAARWGHSQMT*QQLAGLDAHSS
Trigger: GCTGCTGTGCGCATCCAGCCCAGCCAGCTGTTGCCATGTCATCTGACTGTGGCCCCATCTGGCCGCTAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 72 bp CCATTGAGGACACTGTCAGCAGCCCGAGCAGGAGACTaGGGGACAGTCGCGTGGGACAAAGGAGTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: PLRTLSAARAGD*GTVAWDKGVAV
Trigger: CACGGCCACTCCTTTGTCCCACGCGACTGTCCCTCAGTCTCCTGCTCGGGCTGCTGACAGTGTCCTCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000481892.1
CDS CCA 72 bp TATCGAGCCGCCGCCGGCTTTCAGAATCATCATCACTaGTCTCCGAACTACTGCAGCTGGAGCCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: YRAAAGFQNHHH*SPNYCSWSPGP
Trigger: AGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTGAAAGCCGGCGGCGGCTCGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp CAGAATCATCATCACTGGTCTCCGAACTACTGCAGCTaGAGCCCCGGCCCTGACTTTTCCTCCGGTGGTAGC +
Preference number: 6 (lower is better)
Translates to: QNHHHWSPNYCS*SPGPDFSSGGS
Trigger: GCTACCACCGGAGGAAAAGTCAGGGCCGGGGCTCCAGCTGCAGTAGTTCGGAGACCAGTGATGATGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp TCCTGTTTTCACCGGAGAGTCCCACGGCCCAGGGGGTaGATAGATGCAGTCACTGCAAGAAGTGGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SCFHRRVPRPRG*IDAVTARSGGR
Trigger: TCTGCCTCCACTTCTTGCAGTGACTGCATCTATCCACCCCCTGGGCCGTGGGACTCTCCGGTGAAAACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS CAA 72 bp TTGAGGACGGGCGCACTCTTCCTGGATGTCAGGCGGTaGGTTACAGATGGCTTCCGGCGCAAAACCACTTGT +
Preference number: 6 (lower is better)
Translates to: LRTGALFLDVRR*VTDGFRRKTTC
Trigger: ACAAGTGGTTTTGCGCCGGAAGCCATCTGTAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 90 bp AAGATCTGGTTGAGGACGGGCGCACTCTTCCTGGATGTCAGGCGGTaGGTTACAGATGGCTTCCGGCGCAAAACCACTTGTGTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: KIWLRTGALFLDVRR*VTDGFRRKTTCVER
Trigger: CCTCTCAACACAAGTGGTTTTGCGCCGGAAGCCATCTGTAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 72 bp ACTGAGGGACAGTCGCGTGGGACAAAGGAGTGGCCGTaGGGTCATCCTCAAGGTCCTGGGGTACATCAATTT +
Preference number: 6 (lower is better)
Translates to: TEGQSRGTKEWP*GHPQGPGVHQF
Trigger: AAATTGATGTACCCCAGGACCTTGAGGATGACCTCACGGCCACTCCTTTGTCCCACGCGACTGTCCCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000481892.1
CDS TCA 72 bp ACTCATCGTCAGATTCCCCTTCCTCAAAGATCTGGTTaGGGACGGGCGCACTCTTCCTGGATGTCAGGCGGT +
Preference number: 6 (lower is better)
Translates to: THRQIPLPQRSG*GRAHSSWMSGG
Trigger: ACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGGAATCTGACGATGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp TGGTGGTATCTGCCATGTGGTCAGAGAAAAACTTTATaGCGCCCACTGCAGGGACCTGCCCTGCATTCCCTG +
Preference number: 6 (lower is better)
Translates to: WWYLPCGQRKTL*RPLQGPALHSL
Trigger: CAGGGAATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp AGTCCCACGGCCCAGGGGGTGGATAGATGCAGTCACTaGAAGAAGTGGAGGCAGAGCTTCAATAAATCCAGG +
Preference number: 6 (lower is better)
Translates to: SPTAQGVDRCSH*KKWRQSFNKSR
Trigger: CCTGGATTTATTGAAGCTCTGCCTCCACTTCTTGCAGTGACTGCATCTATCCACCCCCTGGGCCGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS CCA 72 bp GCCCAGGGGGTGGATAGATGCAGTCACTGCAAGAAGTaGAGGCAGAGCTTCAATAAATCCAGGCCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: AQGVDRCSHCKK*RQSFNKSRPAD
Trigger: GTCAGCTGGCCTGGATTTATTGAAGCTCTGCCTCCACTTCTTGCAGTGACTGCATCTATCCACCCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS CAA 72 bp AACTCATCGTCAGATTCCCCTTCCTCAAAGATCTGGTaGAGGACGGGCGCACTCTTCCTGGATGTCAGGCGG +
Preference number: 6 (lower is better)
Translates to: NSSSDSPSSKIW*RTGALFLDVRR
Trigger: CCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGGAATCTGACGATGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 72 bp GCGTCTCGATCCGCTATGTCCCCAAGCACCATGCGCTaGATGATGCTGTTGTGCTCCTCTTCCGAGAGATTT +
Preference number: 6 (lower is better)
Translates to: ASRSAMSPSTMR*MMLLCSSSERF
Trigger: AAATCTCTCGGAAGAGGAGCACAACAGCATCATTCAGCGCATGGTGCTTGGGGACATAGCGGATCGAGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000484791.1
CDS TCA 72 bp AGTCAGTTCCTGGGTGAGGGCCACAGGACTGGTTGGTaGATCTGGTGGAGCCATCAGTCCTCAGAAATGCAA +
Preference number: 6 (lower is better)
Translates to: SQFLGEGHRTGW*IWWSHQSSEMQ
Trigger: TTGCATTTCTGAGGACTGATGGCTCCACCAGATTCACCAACCAGTCCTGTGGCCCTCACCCAGGAACTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS TCA 72 bp TCAAAGCTGTCTTCTTCAGCTGAGTCAGTTCCTGGGTaGGGGCCACAGGACTGGTTGGTGAATCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SKLSSSAESVPG*GPQDWLVNLVE
Trigger: CTCCACCAGATTCACCAACCAGTCCTGTGGCCCTCACCCAGGAACTGACTCAGCTGAAGAAGACAGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468628.2
CDS GCA 72 bp TGCCATGTGGTCAGAGAAAAACTTTATGCCGCCCACTaGAGGGACCTGCCCTGCATTCCCTGTGGAGCTAAT +
Preference number: 6 (lower is better)
Translates to: CHVVREKLYAAH*RDLPCIPCGAN
Trigger: ATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp GAAAAACTTTATGCCGCCCACTGCAGGGACCTGCCCTaGATTCCCTGTGGAGCTAATGCACATTTTCCACGT +
Preference number: 6 (lower is better)
Translates to: EKLYAAHCRDLP*IPCGANAHFPR
Trigger: ACGTGGAAAATGTGCATTAGCTCCACAGGGAATGCAGGGCAGGTCCCTGCAGTGGGCGGCATAAAGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp GACAAAGGAGTGGCCGTGAGGTCATCCTCAAGGTCCTaGGGTACATCAATTTTGGTTGGCCATGACTGCCTA +
Preference number: 6 (lower is better)
Translates to: DKGVAVRSSSRS*GTSILVGHDCL
Trigger: TAGGCAGTCATGGCCAACCAAAATTGATGTACCCCAGGACCTTGAGGATGACCTCACGGCCACTCCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000481892.1
CDS CCA 72 bp TCAAACTCATCGTCAGATTCCCCTTCCTCAAAGATCTaGTTGAGGACGGGCGCACTCTTCCTGGATGTCAGG +
Preference number: 6 (lower is better)
Translates to: SNSSSDSPSSKI*LRTGALFLDVR
Trigger: CCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGGAATCTGACGATGAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 90 bp TCCATGTCAAACTCATCGTCAGATTCCCCTTCCTCAAAGATCTGGTaGAGGACGGGCGCACTCTTCCTGGATGTCAGGCGGTTGGTTACA +
Preference number: 6 (lower is better)
Translates to: SMSNSSSDSPSSKIW*RTGALFLDVRRLVT
Trigger: TGTAACCAACCGCCTGACATCCAGGAAGAGTGCGCCCGTCCTCAACCAGATCTTTGAGGAAGGGGAATCTGACGATGAGTTTGACATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 72 bp CTCGATCCGCTATGTCCCCAAGCACCATGCGCTGAATaGTGCTGTTGTGCTCCTCTTCCGAGAGATTTTTGT +
Preference number: 6 (lower is better)
Translates to: LDPLCPQAPCAE*CCCAPLPRDFC
Trigger: ACAAAAATCTCTCGGAAGAGGAGCACAACAGCATCATTCAGCGCATGGTGCTTGGGGACATAGCGGATCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000484791.1
CDS TCA 72 bp CCATTCTGTGGATCAATAATGTACTTGGTGCTCCCATaGAGCTGGGAGCCGAGGCAGAGGCTCATGAGTTTG +
Preference number: 6 (lower is better)
Translates to: PFCGSIMYLVLP*SWEPRQRLMSL
Trigger: CAAACTCATGAGCCTCTGCCTCGGCTCCCAGCTTCATGGGAGCACCAAGTACATTATTGATCCACAGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS TCA 72 bp CATGTAAGTCAGGATGGTCTCGATCTCCTGACCTTGTaGTCTGCCTGCCTCGGCCTTGAATACCTAAGTTCT +
Preference number: 6 (lower is better)
Translates to: HVSQDGLDLLTL*SACLGLEYLSS
Trigger: AGAACTTAGGTATTCAAGGCCGAGGCAGGCAGATCACAAGGTCAGGAGATCGAGACCATCCTGACTTACATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462810.1
CDS CAA 72 bp GTGAGGTCATCCTCAAGGTCCTGGGGTACATCAATTTaGGTTGGCCATGACTGCCTAAACTGGGCCTTGATA +
Preference number: 6 (lower is better)
Translates to: VRSSSRSWGTSI*VGHDCLNWALI
Trigger: TATCAAGGCCCAGTTTAGGCAGTCATGGCCAACCAAAATTGATGTACCCCAGGACCTTGAGGATGACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000481892.1
CDS CCA 72 bp TTTATCCGTTCCAATTCAGTGGTGGTATCTGCCATGTaGTCAGAGAAAAACTTTATGCCGCCCACTGCAGGG +
Preference number: 6 (lower is better)
Translates to: FIRSNSVVVSAM*SEKNFMPPTAG
Trigger: CCCTGCAGTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 90 bp TTTGCAATCCATGATCATTGTCAGTGTTTCACTGTCATTGGCTTCTaGAAAGGGCGGCTGCCCACACACCAACATGAAAAGGATCACTCC +
Preference number: 6 (lower is better)
Translates to: FAIHDHCQCFTVIGF*KGRLPTHQHEKDHS
Trigger: GGAGTGATCCTTTTCATGTTGGTGTGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGTGAAACACTGACAATGATCATGGATTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000462810.1
ENST00000484791.1
CDS CAA 90 bp GTCTTTTCGCACAGAGGTAGCTGCAGCACGTTATTTTTCAGGTTCTaGCTCTTTATCCGTTCCAATTCAGTGGTGGTATCTGCCATGTGG +
Preference number: 6 (lower is better)
Translates to: VFSHRGSCSTLFFRF*LFIRSNSVVVSAMW
Trigger: CCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp CTTGCTCTTTATCCGTTCCAATTCAGTGGTGGTATCTaGCATGTGGTCAGAGAAAAACTTTATGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: LALYPFQFSGGI*HVVREKLYAAH
Trigger: GTGGGCGGCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 72 bp CATGATCATTGTCAGTGTTTCACTGTCATTGGCTTCTaGAAAGGGCGGCTGCCCACACACCAACATGAAAAG +
Preference number: 6 (lower is better)
Translates to: HDHCQCFTVIGF*KGRLPTHQHEK
Trigger: CTTTTCATGTTGGTGTGTGGGCAGCCGCCCTTTCAAGAAGCCAATGACAGTGAAACACTGACAATGATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000462810.1
ENST00000484791.1
CDS GCA 72 bp ATACTCATCACCAAGCAGAATTTCTGGAGCGGAATATaGAAGAGATCCACAGCTTGTAGTGAGCTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: ILITKQNFWSGI*KRSTACSELLP
Trigger: GGGAAGAAGCTCACTACAAGCTGTGGATCTCTTGCATATTCCGCTCCAGAAATTCTGCTTGGTGATGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS CAA 72 bp CCTGGAGAAGCTATATTCATCTTTAACCTGCTCAACTaGGGAGGCAGATTCTCATCCATGTCAAACTCATCG +
Preference number: 6 (lower is better)
Translates to: PGEAIFIFNLLN*GGRFSSMSNSS
Trigger: CGATGAGTTTGACATGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATATAGCTTCTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 72 bp CACAGAGGTAGCTGCAGCACGTTATTTTTCAGGTTCTaGCTCTTTATCCGTTCCAATTCAGTGGTGGTATCT +
Preference number: 6 (lower is better)
Translates to: HRGSCSTLFFRF*LFIRSNSVVVS
Trigger: AGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAAATAACGTGCTGCAGCTACCTCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 90 bp GGAATATGCAAGAGATCCACAGCTTGTAGTGAGCTTCTTCCCTGGTaGAAATTTGTTGCTGAACCCAAAGTCTGTCAACTTTACAAGACC +
Preference number: 6 (lower is better)
Translates to: GICKRSTACSELLPW*KFVAEPKVCQLYKT
Trigger: GGTCTTGTAAAGTTGACAGACTTTGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACAAGCTGTGGATCTCTTGCATATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS TCA 72 bp AGAGATCCACAGCTTGTAGTGAGCTTCTTCCCTGGTTaGAATTTGTTGCTGAACCCAAAGTCTGTCAACTTT +
Preference number: 6 (lower is better)
Translates to: RDPQLVVSFFPG*NLLLNPKSVNF
Trigger: AAAGTTGACAGACTTTGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACAAGCTGTGGATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS GCA 72 bp GAACTGTACCTGGAGAAGCTATATTCATCTTTAACCTaGTCAACTTGGGAGGCAGATTCTCATCCATGTCAA +
Preference number: 6 (lower is better)
Translates to: ELYLEKLYSSLT*STWEADSHPCQ
Trigger: TTGACATGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATATAGCTTCTCCAGGTACAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS GCA 72 bp ATGTTCACAGAGATGGTCTTTTCGCACAGAGGTAGCTaGAGCACGTTATTTTTCAGGTTCTTGCTCTTTATC +
Preference number: 6 (lower is better)
Translates to: MFTEMVFSHRGS*STLFFRFLLFI
Trigger: GATAAAGAGCAAGAACCTGAAAAATAACGTGCTGCAGCTACCTCTGTGCGAAAAGACCATCTCTGTGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp GTAAAGACATGCCTGGCAAGTTTAACCACGGCAAAATaGCCTCGACCCAAGGTTTTATCCAGATCATATAAT +
Preference number: 6 (lower is better)
Translates to: VKTCLASLTTAK*PRPKVLSRSYN
Trigger: ATTATATGATCTGGATAAAACCTTGGGTCGAGGCCATTTTGCCGTGGTTAAACTTGCCAGGCATGTCTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS CCA 72 bp CTGGAGAAGCTATATTCATCTTTAACCTGCTCAACTTaGGAGGCAGATTCTCATCCATGTCAAACTCATCGT +
Preference number: 6 (lower is better)
Translates to: LEKLYSSLTCST*EADSHPCQTHR
Trigger: ACGATGAGTTTGACATGGATGAGAATCTGCCTCCCAAGTTGAGCAGGTTAAAGATGAATATAGCTTCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CCA 72 bp TCAGGTTCTTGCTCTTTATCCGTTCCAATTCAGTGGTaGTATCTGCCATGTGGTCAGAGAAAAACTTTATGC +
Preference number: 6 (lower is better)
Translates to: SGSCSLSVPIQW*YLPCGQRKTLC
Trigger: GCATAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 72 bp AAGAGATCCACAGCTTGTAGTGAGCTTCTTCCCTGGTaGAAATTTGTTGCTGAACCCAAAGTCTGTCAACTT +
Preference number: 6 (lower is better)
Translates to: KRSTACSELLPW*KFVAEPKVCQL
Trigger: AAGTTGACAGACTTTGGGTTCAGCAACAAATTTCAACCAGGGAAGAAGCTCACTACAAGCTGTGGATCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000454177.5
ENST00000462810.1
CDS CCA 72 bp TTTTCAGGTTCTTGCTCTTTATCCGTTCCAATTCAGTaGTGGTATCTGCCATGTGGTCAGAGAAAAACTTTA +
Preference number: 6 (lower is better)
Translates to: FSGSCSLSVPIQ*WYLPCGQRKTL
Trigger: TAAAGTTTTTCTCTGACCACATGGCAGATACCACCACTGAATTGGAACGGATAAAGAGCAAGAACCTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
CDS CAA 90 bp ATTAGGTCTTTACACTCTTTAGACACATGGGATGGTACTGTATATTaGCAATCCATGATCATTGTCAGTGTTTCACTGTCATTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: IRSLHSLDTWDGTVY*QSMIIVSVSLSLAS
Trigger: AGAAGCCAATGACAGTGAAACACTGACAATGATCATGGATTGCAAATATACAGTACCATCCCATGTGTCTAAAGAGTGTAAAGACCTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296088.12
ENST00000429705.6
ENST00000437827.1
ENST00000454177.5
ENST00000484791.1
CDS CAA 90 bp ACTTACTCTTTACACTCTTTAGACACATGGGATGGTACTGTATATTaGCAATCCATGATCATTGTCAGTGTTTCACTGTCATTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: TYSLHSLDTWDGTVY*QSMIIVSVSLSLAS
Trigger: AGAAGCCAATGACAGTGAAACACTGACAATGATCATGGATTGCAAATATACAGTACCATCCCATGTGTCTAAAGAGTGTAAAGAGTAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462810.1
CDS CCA 72 bp TTTTACTTACTCTTTACACTCTTTAGACACATGGGATaGTACTGTATATTTGCAATCCATGATCATTGTCAG +
Preference number: 6 (lower is better)
Translates to: FYLLFTLFRHMG*YCIFAIHDHCQ
Trigger: CTGACAATGATCATGGATTGCAAATATACAGTACCATCCCATGTGTCTAAAGAGTGTAAAGAGTAAGTAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462810.1