RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNPH (Homo sapiens)

Ensembl gene IDs: ENSG00000101298

Ensembl transcript IDs: ENST00000381867.6, ENST00000381873.7, ENST00000614659.1, ENST00000649598.1

Found 1035 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGCTCTCTGTGCAGAGCCCGGGCCCCAGCGTCCGATTCCTGCCTaGGCCTGGACTGGCCGGGCAGTAGTGCCACTCTGGCCCGAGCCC +
Preference number: 1 (lower is better)
Translates to: PALCAEPGPQRPIPA*AWTGRAVVPLWPEP
Trigger: GGGCTCGGGCCAGAGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGGGGCCCGGGCTCTGCACAGAGAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp TGCAGAGCCCGGGCCCCAGCGTCCGATTCCTGCCTGAGCCTGGACTaGCCGGGCAGTAGTGCCACTCTGGCCCGAGCCCTAGAACTCAGG +
Preference number: 1 (lower is better)
Translates to: CRARAPASDSCLSLD*PGSSATLARALELR
Trigger: CCTGAGTTCTAGGGCTCGGGCCAGAGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGGGGCCCGGGCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 90 bp CCCTCCCAGCCCCATGTGTACCCTGCCTCTTCAGGGCATGGCACCTaGGCAGCAGCTGCCGCACCTCCACCGCCTGGAGCCTCACAGGCA +
Preference number: 1 (lower is better)
Translates to: PSQPHVYPASSGHGT*AAAAAPPPPGASQA
Trigger: TGCCTGTGAGGCTCCAGGCGGTGGAGGTGCGGCAGCTGCTGCTCAGGTGCCATGCCCTGAAGAGGCAGGGTACACATGGGGCTGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp GCGCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTaGATTGGTTTTGTCCACTGCCCCCTCCGTGGCATGGCCACAGTG +
Preference number: 1 (lower is better)
Translates to: ARHRRLGPQPVPAWL*IGFVHCPLRGMATV
Trigger: CACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp GTGAGTGCGCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTaGCTTTGGATTGGTTTTGTCCACTGCCCCCTCCGTGGCATGGCC +
Preference number: 1 (lower is better)
Translates to: VSARHRRLGPQPVPA*LWIGFVHCPLRGMA
Trigger: GGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCGCACTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 90 bp GTCTGGGGAGGCTGGAATGCCGGCCGGCCCAGTGGTTCTGGCCTCTaGTCTGAGCCCTGGGTCAGTGATCTGCACTTCAGGCCATGGCTG +
Preference number: 1 (lower is better)
Translates to: VWGGWNAGRPSGSGL*SEPWVSDLHFRPWL
Trigger: CAGCCATGGCCTGAAGTGCAGATCACTGACCCAGGGCTCAGAGCAGAGGCCAGAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR GCA 90 bp CCATGTGTACCCTGCCTCTTCAGGGCATGGCACCTGAGCAGCAGCTaGCGCACCTCCACCGCCTGGAGCCTCACAGGCAGCCTGCACCTT +
Preference number: 1 (lower is better)
Translates to: PCVPCLFRAWHLSSS*RTSTAWSLTGSLHL
Trigger: AAGGTGCAGGCTGCCTGTGAGGCTCCAGGCGGTGGAGGTGCGGCAGCTGCTGCTCAGGTGCCATGCCCTGAAGAGGCAGGGTACACATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp AGGACCCTCAACACTGTGGGCCAGGGCCCTCGTGACCCACACCGGTaGTCTCAGGCCAGAACAGGAGTAGACGGCCGCTGCTGGCTACAC +
Preference number: 1 (lower is better)
Translates to: RTLNTVGQGPRDPHR*SQARTGVDGRCWLH
Trigger: GTGTAGCCAGCAGCGGCCGTCTACTCCTGTTCTGGCCTGAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCCACAGTGTTGAGGGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 90 bp CACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAGGGGCCGGGTTGGCCCTCGCTCCCT +
Preference number: 1 (lower is better)
Translates to: HMKTARDFLSRAGPV*RAKGTEGPGWPSLP
Trigger: AGGGAGCGAGGGCCAACCCGGCCCCTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR GCA 90 bp CTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTaGAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACA +
Preference number: 1 (lower is better)
Translates to: LGRDGMECAGHWTGW*RAGAYGQLKPGFPT
Trigger: TGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGCACCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR CCA 90 bp GCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTGGATTaGTTTTGTCCACTGCCCCCTCCGTGGCATGGCCACAGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: AQEAGSAASPGLALD*FCPLPPPWHGHSVL
Trigger: CAGGACACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 90 bp CTGGAGCCTCACAGGCAGCCTGCACCTTTGCATAGATGCGGGATCTaGGCACACACACATGCACTCCAGAGCTGGGCCAGGGCCACCGGC +
Preference number: 1 (lower is better)
Translates to: LEPHRQPAPLHRCGI*AHTHALQSWARATG
Trigger: GCCGGTGGCCCTGGCCCAGCTCTGGAGTGCATGTGTGTGTGCTCAGATCCCGCATCTATGCAAAGGTGCAGGCTGCCTGTGAGGCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 90 bp GGCAAAGCTTTGACTATGTCTGAGGAGACTACGCAGCTCCGTGAGTaGGCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCT +
Preference number: 1 (lower is better)
Translates to: GKALTMSEETTQLRE*AAQEAGSAASPGLA
Trigger: AGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCGCACTCACGGAGCTGCGTAGTCTCCTCAGACATAGTCAAAGCTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp TCAGCAGCGTGGCTGGGGGACTCAGTATGGTCCCGGGAAAAGAGTTaGGGCAGTGAACTTCCCAGGCCGACTGGCCTTGGGCTGGGAGCA +
Preference number: 1 (lower is better)
Translates to: SAAWLGDSVWSREKS*GSELPRPTGLGLGA
Trigger: TGCTCCCAGCCCAAGGCCAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCCCCAGCCACGCTGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp GCCAGAGGGGCGAGTAAGACACAGGGTCCCTCCAACCCCCAGAGGTaGGGCCTAGCCTCTGAAGAGTGGGTGGGACAACCAGATGGGTGT +
Preference number: 1 (lower is better)
Translates to: ARGASKTQGPSNPQR*GLASEEWVGQPDGC
Trigger: ACACCCATCTGGTTGTCCCACCCACTCTTCAGAGGCTAGGCCCCACCTCTGGGGGTTGGAGGGACCCTGTGTCTTACTCGCCCCTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 90 bp CCCTGCCTAGGAAACCTATCCCAGGACACCCTGCTTTGGCCTGGATaGACATCGTGGCTTCAGTACGCGCCATCCTGCGATTCATCCTGC +
Preference number: 1 (lower is better)
Translates to: PCLGNLSQDTLLWPG*TSWLQYAPSCDSSC
Trigger: GCAGGATGAATCGCAGGATGGCGCGTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATAGGTTTCCTAGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 90 bp CAATTTGTCCAGCTGGTGTACCTCCTGCCTTGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGGGATGCCTTTCTCCAACCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: QFVQLVYLLPWVPLP*SPSKLWDAFLQPLL
Trigger: GAGCAGGGGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCTGGACAAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR CCA 90 bp ACGCCCCTGCCTAGGAAACCTATCCCAGGACACCCTGCTTTGGCCTaGATGAACATCGTGGCTTCAGTACGCGCCATCCTGCGATTCATC +
Preference number: 1 (lower is better)
Translates to: TPLPRKPIPGHPALA*MNIVASVRAILRFI
Trigger: GATGAATCGCAGGATGGCGCGTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATAGGTTTCCTAGGCAGGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp GTTAGGCAATGGCTGTTGGAGCATTGGGGTGAGGGCAAGCAACCTTaGCAGATAACCAGAGTGGCCCTTAGGCCAGAGGGGCGAGTAAGA +
Preference number: 1 (lower is better)
Translates to: VRQWLLEHWGEGKQP*QITRVALRPEGRVR
Trigger: TCTTACTCGCCCCTCTGGCCTAAGGGCCACTCTGGTTATCTGCCAAGGTTGCTTGCCCTCACCCCAATGCTCCAACAGCCATTGCCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp GAACCCTCATCTCAGACAGCAAGCAGCCACCTCACTGGAGACCCTTaGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAG +
Preference number: 1 (lower is better)
Translates to: EPSSQTASSHLTGDP*MAENQPQSEHSAKQ
Trigger: CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAGGTGGCTGCTTGCTGTCTGAGATGAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 90 bp CCTCATCTCAGACAGCAAGCAGCCACCTCACTGGAGACCCTTGGATaGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGAAGT +
Preference number: 1 (lower is better)
Translates to: PHLRQQAATSLETLG*LRTNPKVNIVQSRS
Trigger: ACTTCTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAGGTGGCTGCTTGCTGTCTGAGATGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACTGGGGAGGCTGGAATaGCGGCCGGCCCAGTGGTTC +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLGRLE*RPAQWF
Trigger: GAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACGACTGGCCTTGGGCTaGGAGCAGGGAGGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPRLALG*EQGGCR
Trigger: CCTGCAGCCTCCCTGCTCCCAGCCCAAGGCCAGTCG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGAGATGGCCTCACCTTaGAAGGCTGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPEMASP*KAGGAP
Trigger: GGGGGCTCCCCCAGCCTTCCAAGGTGAGGCCATCTC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 90 bp GGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTGGATTGGTTTaGTCCACTGCCCCCTCCGTGGCATGGCCACAGTGTCCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: GGWVRSQSRLGFGLV*STAPSVAWPQCPAG
Trigger: CCCCGCAGGACACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 90 bp CGTGAGTGCGCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTaGGCTTTGGATTGGTTTTGTCCACTGCCCCCTCCGTGGCATGGC +
Preference number: 2 (lower is better)
Translates to: RECAAQEAGSAASPG*ALDWFCPLPPPWHG
Trigger: GCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCGCACTCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRRAGPV*RAKGTE
Trigger: CTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACCCGGCTTCCCCACATaGAGACAGCCAGAGACTTCC +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPPGFPT*RQPETS
Trigger: GGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPSWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATGTCAGCAGCGTGGCTaGGGGACTCAGTATGGTCCC +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPCQQRG*GTQYGP
Trigger: GGGACCATACTGAGTCCCCCAGCCACGCTGCTGACA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 90 bp TGCGCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTaGGATTGGTTTTGTCCACTGCCCCCTCCGTGGCATGGCCACAGT +
Preference number: 2 (lower is better)
Translates to: CAAQEAGSAASPGLA*DWFCPLPPPWHGHS
Trigger: ACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRRAGPV*RAKGTE
Trigger: CTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCT...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAAAAGAGTTGGGGCAGTaGACTTCCCAGGCCGACTGG +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPKELGQ*TSQADW
Trigger: CCAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTT...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 90 bp GGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTGGATaGGTTTTGTCCACTGCCCCCTCCGTGGCATGGCCACAGTGTCCT +
Preference number: 2 (lower is better)
Translates to: GTGGWVRSQSRLGFG*VLSTAPSVAWPQCP
Trigger: AGGACACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGAGGGCAAGCAACCTTaGCAGATAACCAGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPEGKQP*QITRVA
Trigger: GGCCACTCTGGTTATCTGCCAAGGTTGCTTGCCCTC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACTGGGGAGGCTGGAATaGCGGCCGGCCCAGTGGTTC +
Preference number: 2 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLGRLE*RPAQWF
Trigger: GAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCAGGGCAGGGGCCTATaGGCAACTCAAGCCCGGCTT +
Preference number: 2 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWQGRGL*ATQARL
Trigger: AAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCAGTCTGGGGAGGCTaGAATGCCGGCCGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPAVWGG*NAGRPS
Trigger: ACTGGGCCGGCCGGCATTCCAGCCTCCCCAGACTGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACTCTTCTTGTGCTGGTaGATTCTCCAGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLFLCW*ILQLGA
Trigger: AGCTCCCAGCTGGAGAATCCACCAGCACAAGAAGAG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACACCCTGCTTTGGCCTaGATGAACATCGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPHPALA*MNIVAS
Trigger: TGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACCTCTGAAGAGTGGGTaGGACAACCAGATGGGTGTA +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPPLKSG*DNQMGV
Trigger: TACACCCATCTGGTTGTCCCACCCACTCTTCAGAGG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATTAGGCAATGGCTGTTaGAGCATTGGGGTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLGNGC*SIGVRA
Trigger: TGCCCTCACCCCAATGCTCCAACAGCCATTGCCTAA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDSWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGCCCTCCGCCACCTTaGGCCCAGCCCCGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FFSKLWVPESSPASQPADCPPPP*AQPRLS
Trigger: GGAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR TCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCAGCCAGAGACTTCCTaGGCAGGGCTGGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SVRAILRFILPEYPTLLQQPETS*AGLALS
Trigger: AGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTG...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCTTCCTGAGCAGGGCTaGCCCTGTCTGAAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWLPEQG*PCLKSQ
Trigger: TTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGGGCTGCGGGCAAGGTaGCTTGGAAGAGACGGCATG +
Preference number: 2 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRGLRAR*LGRDGM
Trigger: CATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGAGATGGCCTCACCTTaGAAGGCTGGGGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLEMASP*KAGGAP
Trigger: GGGGGCTCCCCCAGCCTTCCAAGGTGAGGCCATCTC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 90 bp TCTGCCACGCCCCTGCCTAGGAAACCTATCCCAGGACACCCTGCTTaGGCCTGGATGAACATCGTGGCTTCAGTACGCGCCATCCTGCGA +
Preference number: 2 (lower is better)
Translates to: SATPLPRKPIPGHPA*AWMNIVASVRAILR
Trigger: TCGCAGGATGGCGCGTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATAGGTTTCCTAGGCAGGGGCGTGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCCTTTCTCCAACCCCTaGTCCTTCCACGGGACTGTT +
Preference number: 2 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDPFSNP*SFHGTV
Trigger: AACAGTCCCGTGGAAGGAGCAGGGGTTGGAGAAAGG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPSWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: TQARLPHMKTARDFLSRASWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCTCCATCGAAGCTTTaGGATGCCTTTCTCCAACCC +
Preference number: 2 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSPSKL*DAFLQP
Trigger: GGGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTCACCTTGGAAGGCTaGGGGAGCCCCCTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRLTLEG*GSPLGF
Trigger: AAACCCAAGGGGGCTCCCCCAGCCTTCCAAGGTGAG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCGCACCTCCACCGCCTaGAGCCTCACAGGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGRTSTA*SLTGSL
Trigger: CAGGCTGCCTGTGAGGCTCCAGGCGGTGGAGGTGCG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAG +
Preference number: 2 (lower is better)
Translates to: FFSKLWVPESSPASQPADRAGPV*RAKGTE
Trigger: CTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR TCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAATGGCTGCCTCCATTTaGGGAGAGAGCACTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPMAASI*GESTGP
Trigger: TGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCAT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCCCCCTTGGGTTTCTaGCCCTGCCTCCTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPAPLGF*PCLLFL
Trigger: CAAGAAGAGGAGGCAGGGGCAGAAACCCAAGGGGGC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATTGGAAGAGACGGCATaGAGTGCGCAGGGCACTGGA +
Preference number: 2 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLEETA*SAQGTG
Trigger: TCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTGCAAAGCAGAAGTTaGGCCCGAGGGCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPVQSRS*ARGPQR
Trigger: TCTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCAC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGATGGCTGCCTCCATTTaGGGAGAGAGCACTGGCCCA +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLMAASI*GESTGP
Trigger: TGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCAT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGACACAGAACCCACACTaGCCTCCGCCACCTTGCGCC +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGTQNPH*PPPPCA
Trigger: GGCGCAAGGTGGCGGAGGGCAGTGTGGGTTCTGTGT...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATCCTGCGATTCATCCTaGCAGAATACCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSCDSS*QNTPPS
Trigger: GGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCATGGGAGCAGGGAGGCTaGAGGGCGCCTACCTGCTCT +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAWEQGG*RAPTCS
Trigger: AGAGCAGGTAGGCGCCCTGCAGCCTCCCTGCTCCCA...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCTTCCTGAGCAGGGCTaGCCCTGTCTGAAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLLPEQG*PCLKSQ
Trigger: TTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGCGGGCAAGGTGGCTTaGAAGAGACGGCATGGAGTG +
Preference number: 2 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEAGKVA*KRRHGV
Trigger: CACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAAGGTGGGCAGCAGTCTaGGGAGGCTGGAATGCCGGC +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDARWAAV*GGWNAG
Trigger: GCCGGCATTCCAGCCTCCCCAGACTGCTGCCCACCT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTCACTGGAGACCCTTaGATGGCTGAGAACCAACCC +
Preference number: 2 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRLTGDP*MAENQP
Trigger: GGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTGCCTGAGCCTGGACTaGCCGGGCAGTAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGCLSLD*PGSSAT
Trigger: AGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATATGGCTGCCTCCATTTaGGGAGAGAGCACTGGCCCA +
Preference number: 2 (lower is better)
Translates to: FFSKLWVPESSPASQPADMAASI*GESTGP
Trigger: TGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCAT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAAAAGGTTGGCTGGTCTaGGGCCCTGACCAAGGCGGG +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAKGWLV*GPDQGG
Trigger: CCCGCCTTGGTCAGGGCCTCAGACCAGCCAACCTTT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACCTTTCTCCAACCCCTaGTCCTTCCACGGGACTGTT +
Preference number: 2 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPPFSNP*SFHGTV
Trigger: AACAGTCCCGTGGAAGGAGCAGGGGTTGGAGAAAGG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCCTTTCTCCAACCCCTaGTCCTTCCACGGGACTGTT +
Preference number: 2 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEPFSNP*SFHGTV
Trigger: AACAGTCCCGTGGAAGGAGCAGGGGTTGGAGAAAGG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCTGGGTCAGTGATCTaGACTTCAGGCCATGGCTGC +
Preference number: 2 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPGSVI*TSGHGC
Trigger: GCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTGCCTCCTCTTCTTGTaGTGGTGGATTCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SVRAILRFILPEYPTLLQCLLFL*WWILQL
Trigger: CAGCTGGAGAATCCACCAGCACAAGAAGAGGAGGCA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTGCAATTTGTCCAGCTaGTGTACCTCCTGCCTTGGG +
Preference number: 2 (lower is better)
Translates to: TQARLPHMKTARDFLSRACNLSS*CTSCLG
Trigger: CCCAAGGCAGGAGGTACACCAGCTGGACAAATTGCA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACAGGGCAGGGGCCTATaGGCAACTCAAGCCCGGCTT +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAQGRGL*ATQARL
Trigger: AAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCTGCACTTCAGGCCATaGCTGCCTCCATTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLLHFRP*LPPFEE
Trigger: CTCCTCAAATGGAGGCAGCCATGGCCTGAAGTGCAG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGGTGGGCAGCAGTCTaGGGAGGCTGGAATGCCGGC +
Preference number: 2 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQRWAAV*GGWNAG
Trigger: GCCGGCATTCCAGCCTCCCCAGACTGCTGCCCACCT...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGGTGGATTCTCCAGCTaGGAGCTGGGACTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGGGFSS*ELGLRQ
Trigger: CTGCCTGAGTCCCAGCTCCCAGCTGGAGAATCCACC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCTCTTCTTGTGCTGGTaGATTCTCCAGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: SVRAILRFILPEYPTLLQLFLCW*ILQLGA
Trigger: AGCTCCCAGCTGGAGAATCCACCAGCACAAGAAGAG...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTCCTCTTCTTGTGCTaGTGGATTCTCCAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRLLFLC*WILQLG
Trigger: TCCCAGCTGGAGAATCCACCAGCACAAGAAGAGGAG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCTCACTGGAGACCCTTaGATGGCTGAGAACCAACCC +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLLTGDP*MAENQP
Trigger: GGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACTCACTGGAGACCCTTaGATGGCTGAGAACCAACCC +
Preference number: 2 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPLTGDP*MAENQP
Trigger: GGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTGTCAGCAGCGTGGCTaGGGGACTCAGTATGGTCCC +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGCQQRG*GTQYGP
Trigger: GGGACCATACTGAGTCCCCCAGCCACGCTGCTGACA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATCAGGCATCTGGGTTTaGTTTGGCTGGGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: RAGGKVTAQREEVLGRKESGIWV*FGWAGA
Trigger: AGCCCCAGCCCAGCCAAACCAAACCCAGATGCCTGA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACAGCCAGAGACTTCCTaGGCAGGGCTGGCCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQQPETS*AGLALS
Trigger: AGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGCCTGTGGCCTTGACTaGGCTCCTGAGTCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQACGLD*APESQG
Trigger: ACCTTGGGACTCAGGAGCTCAGTCAAGGCCACAGGC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGATCGAAGCTTTGGGATaGCTTTCTCCAACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: SVRAILRFILPEYPTLLQIEALG*LSPTPA
Trigger: AGCAGGGGTTGGAGAAAGGCATCCCAAAGCTTCGAT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGACTTCAGGCCATGGCTaGCTCCATTTGAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLTSGHG*LHLRRE
Trigger: CTCTCTCCTCAAATGGAGGCAGCCATGGCCTGAAGT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCCTGGGTCAGTGATCTaGACTTCAGGCCATGGCTGC +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGPGSVI*TSGHGC
Trigger: GCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCTTCCTGAGCAGGGCTaGCCCTGTCTGAAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLPEQG*PCLKSQ
Trigger: TTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTTGGAAGAGACGGCATaGAGTGCGCAGGGCACTGGA +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLEETA*SAQGTG
Trigger: TCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGCGGGCAAGGTGGCTTaGAAGAGACGGCATGGAGTG +
Preference number: 2 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQAGKVA*KRRHGV
Trigger: CACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCTCGGGGCAAGTTTCTaGGGGCAGTCATGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQLGASF*GQSWPL
Trigger: CAGAGGCCATGACTGCCCCCAGAAACTTGCCCCGAG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAAAAGGTTGGCTGGTCTaGGGCCCTGACCAAGGCGGG +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAKGWLV*GPDQGG
Trigger: CCCGCCTTGGTCAGGGCCTCAGACCAGCCAACCTTT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGCCCCCTTGGGTTTCTaGCCCTGCCTCCTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQAPLGF*PCLLFL
Trigger: CAAGAAGAGGAGGCAGGGGCAGAAACCCAAGGGGGC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTCCTGCGATTCATCCTaGCAGAATACCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGSCDSS*QNTPPS
Trigger: GGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACAGTACGCGCCATCCTaGGATTCATCCTGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEQYAPS*DSSCQN
Trigger: ATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 2 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTCTCCATCGAAGCTTTaGGATGCCTTTCTCCAACCC +
Preference number: 2 (lower is better)
Translates to: MGNSSPASPHEDSQRLPESPSKL*DAFLQP
Trigger: GGGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACAGGGCAGGGGCCTATaGGCAACTCAAGCCCGGCTT +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAQGRGL*ATQARL
Trigger: AAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGATGACGGGAAAGCCTaGGATGAACAGACAGACACA +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLDDGKA*DEQTDT
Trigger: TGTGTCTGTCTGTTCATCCCAGGCTTTCCCGTCATC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCTCTTCTTGTGCTGGTaGATTCTCCAGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: FFSKLWVPESSPASQPADLFLCW*ILQLGA
Trigger: AGCTCCCAGCTGGAGAATCCACCAGCACAAGAAGAG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTCCCGGGAAAAGAGTTaGGGCAGTGAACTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGSREKS*GSELPR
Trigger: CCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGGCTTGGCTTTGGATTaGTTTTGTCCACTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEGLALD*FCPLPP
Trigger: AGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCCAGAAGGTGGTTCCTaGGGACACTGTTCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGPEGGS*GHCSSG
Trigger: TCCTGAGGAACAGTGTCCCCAGGAACCACCTTCTGG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACCCGGCTTCCCCACATaGAGACAGCCAGAGACTTCC +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAPGFPT*RQPETS
Trigger: GGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCACAGGAATAATGACTaGCACACCCAGAAGTGCCAA +
Preference number: 2 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLHRNND*HTQKCQ
Trigger: TTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGCTCTGCCACGCCCCTaGCTAGGAAACCTATCCCAG +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAALPRP*LGNLSQ
Trigger: CTGGGATAGGTTTCCTAGGCAGGGGCGTGGCAGAGC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGCGGGCAAGGTGGCTTaGAAGAGACGGCATGGAGTG +
Preference number: 2 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMAGKVA*KRRHGV
Trigger: CACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGATGACGGGAAAGCCTaGGATGAACAGACAGACACA +
Preference number: 2 (lower is better)
Translates to: FFSKLWVPESSPASQPADDDGKA*DEQTDT
Trigger: TGTGTCTGTCTGTTCATCCCAGGCTTTCCCGTCATC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCTCTTCTTGTGCTGGTaGATTCTCCAGCTGGGAGCT +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLFLCW*ILQLGA
Trigger: AGCTCCCAGCTGGAGAATCCACCAGCACAAGAAGAG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCACCCTGCTTTGGCCTaGATGAACATCGTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGHPALA*MNIVAS
Trigger: TGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACTGGGGGACTCAGTATaGTCCCGGGAAAAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDALGDSV*SREKSW
Trigger: CCAACTCTTTTCCCGGGACCATACTGAGTCCCCCAG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCATCTGGGTTTGGTTTaGCTGGGCTGGGGCTTATTC +
Preference number: 2 (lower is better)
Translates to: NMGMHCDLFALSPRSERGHLGLV*LGWGLF
Trigger: GAATAAGCCCCAGCCCAGCCAAACCAAACCCAGATG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAAAAGAGTTGGGGCAGTaGACTTCCCAGGCCGACTGG +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAKELGQ*TSQADW
Trigger: CCAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGACTTCAGGCCATGGCTaGCTCCATTTGAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQTSGHG*LHLRRE
Trigger: CTCTCTCCTCAAATGGAGGCAGCCATGGCCTGAAGT...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCATGCCTCCTCTTCTTGTaGTGGTGGATTCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDACLLFL*WWILQL
Trigger: CAGCTGGAGAATCCACCAGCACAAGAAGAGGAGGCA...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACTGAGCACACACACATaGACTCCAGAGCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCALSTHT*TPELGQ
Trigger: CTGGCCCAGCTCTGGAGTGCATGTGTGTGTGCTCAG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATGCCTCCTCTTCTTGTaGTGGTGGATTCTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQCLLFL*WWILQL
Trigger: CAGCTGGAGAATCCACCAGCACAAGAAGAGGAGGCA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTTTTTCAGTAAGCTGTaGGTTCCTGAGTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQFFSKL*VPESSP
Trigger: AGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCATTTTTCAGTAAGCTGTaGGTTCCTGAGTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAFFSKL*VPESSP
Trigger: AGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGTCCCGGCTTGGCTTTaGATTGGTTTTGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAVPAWL*IGFVHC
Trigger: GCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGAC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR TCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACACAGGAATAATGACTaGCACACCCAGAAGTGCCAA +
Preference number: 2 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQHRNND*HTQKCQ
Trigger: TTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAATCGAAGCTTTGGGATaGCTTTCTCCAACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAIEALG*LSPTPA
Trigger: AGCAGGGGTTGGAGAAAGGCATCCCAAAGCTTCGAT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp CGGGCCCCAGCGTCCGATTCCTGCCTGAGCCTGGACTaGCCGGGCAGTAGTGCCACTCTGGCCCGAGCCCTA +
Preference number: 3 (lower is better)
Translates to: RAPASDSCLSLD*PGSSATLARAL
Trigger: TAGGGCTCGGGCCAGAGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGGGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 72 bp TGTGCAGAGCCCGGGCCCCAGCGTCCGATTCCTGCCTaGGCCTGGACTGGCCGGGCAGTAGTGCCACTCTGG +
Preference number: 3 (lower is better)
Translates to: CAEPGPQRPIPA*AWTGRAVVPLW
Trigger: CCAGAGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGGGGCCCGGGCTCTGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp GCCCCCTCCCAGTGCATGCAGGTGCCCCGCCTCACGTaGAGGGCACCGAGCAGAAGGGCAGAGCCCATGAGT +
Preference number: 3 (lower is better)
Translates to: APSQCMQVPRLT*RAPSRRAEPMS
Trigger: ACTCATGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGCACTGGGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 72 bp ACAGCCAGAGACTTCCTGAGCAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAGGGGCCGGGTTGGCCC +
Preference number: 3 (lower is better)
Translates to: TARDFLSRAGPV*RAKGTEGPGWP
Trigger: GGGCCAACCCGGCCCCTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR CCA 72 bp AACACTGTGGGCCAGGGCCCTCGTGACCCACACCGGTaGTCTCAGGCCAGAACAGGAGTAGACGGCCGCTGC +
Preference number: 3 (lower is better)
Translates to: NTVGQGPRDPHR*SQARTGVDGRC
Trigger: GCAGCGGCCGTCTACTCCTGTTCTGGCCTGAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCCACAGTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp CAGGAGAGCCCCCGAAAGAGAGGACCCTCAACACTGTaGGCCAGGGCCCTCGTGACCCACACCGGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: QESPRKRGPSTL*ARALVTHTGGL
Trigger: GAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCCACAGTGTTGAGGGTCCTCTCTTTCGGGGGCTCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 72 bp CGCCCCATCTTTGCCCTCCCAGCCCCATGTGTACCCTaGCTCTTCAGGGCATGGCACCTGAGCAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: RPIFALPAPCVP*LFRAWHLSSSC
Trigger: GCAGCTGCTGCTCAGGTGCCATGCCCTGAAGAGGCAGGGTACACATGGGGCTGGGAGGGCAAAGATGGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp GCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTGGATTaGTTTTGTCCACTGCCCCCTCCGTGGCATGGCCAC +
Preference number: 3 (lower is better)
Translates to: AGSAASPGLALD*FCPLPPPWHGH
Trigger: GTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR TCA 72 bp AGAGAGGACCCTCAACACTGTGGGCCAGGGCCCTCGTaGCCCACACCGGTGGTCTCAGGCCAGAACAGGAGT +
Preference number: 3 (lower is better)
Translates to: REDPQHCGPGPS*PTPVVSGQNRS
Trigger: ACTCCTGTTCTGGCCTGAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCCACAGTGTTGAGGGTCCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 72 bp AAGCCTGGGATGAACAGACAGACACAGAACCCACACTaGCCTCCGCCACCTTGCGCCCAGCCCCGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: KPGMNRQTQNPH*PPPPCAQPRLS
Trigger: GGAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR GCA 72 bp CCAGTCCCGGCTTGGCTTTGGATTGGTTTTGTCCACTaGCCCCTCCGTGGCATGGCCACAGTGTCCTGCGGG +
Preference number: 3 (lower is better)
Translates to: PVPAWLWIGFVH*PLRGMATVSCG
Trigger: CCCGCAGGACACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 72 bp TTGACTATGTCTGAGGAGACTACGCAGCTCCGTGAGTaGGCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCC +
Preference number: 3 (lower is better)
Translates to: LTMSEETTQLRE*AAQEAGSAASP
Trigger: GGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCGCACTCACGGAGCTGCGTAGTCTCCTCAGACATAGTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp AGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTaGATTGGTTTTGTCCACTGCCCCCTCCGTGGCATG +
Preference number: 3 (lower is better)
Translates to: RRLGPQPVPAWL*IGFVHCPLRGM
Trigger: CATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGACAGAGGGGCCGGGTaGGCCCTCGCTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: FFSKLWVPESSPASQPADDRGAG*ALAPSP
Trigger: AGGGGAGGGAGCGAGGGCCAACCCGGCCCCTCTGTC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR TCA 72 bp GGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTaGACTTCCCAGGCCGACTGGCCTTGGGCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: GLSMVPGKELGQ*TSQADWPWAGS
Trigger: GCTCCCAGCCCAAGGCCAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp CCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTaGCCCTGTCTGAAGAGCCAAGGGGACAGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: PHEDSQRLPEQG*PCLKSQGDRGA
Trigger: GGCCCCTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR CCA 72 bp GCGAGTAAGACACAGGGTCCCTCCAACCCCCAGAGGTaGGGCCTAGCCTCTGAAGAGTGGGTGGGACAACCA +
Preference number: 3 (lower is better)
Translates to: ASKTQGPSNPQR*GLASEEWVGQP
Trigger: TGGTTGTCCCACCCACTCTTCAGAGGCTAGGCCCCACCTCTGGGGGTTGGAGGGACCCTGTGTCTTACTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 3 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRLSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCTGCCCTCCGCCACCTaGCGCCCAGCCCCGTCTCTC +
Preference number: 3 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQLPSAT*RPAPSL
Trigger: GAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCAG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAAGTGCAAAGCAGAAGTaGGGCCCGAGGGCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSAKQK*GPRAPE
Trigger: CTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCACT...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR GCA 72 bp TCGTGGCTTCAGTACGCGCCATCCTGCGATTCATCCTaGCAGAATACCCCACCCTCCTCCAGAGGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: SWLQYAPSCDSS*QNTPPSSRGRE
Trigger: CTCTCTGCCTCTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAAGCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp TCTGAGCCCTGGGTCAGTGATCTGCACTTCAGGCCATaGCTGCCTCCATTTGAGGAGAGAGCACTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: SEPWVSDLHFRP*LPPFEERALAQ
Trigger: CTGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGGGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR CCA 72 bp CCCAGCCAGGCCTCAGGCATCTGGGTTTGGTTTGGCTaGGCTGGGGCTTATTCCACAAAGGTTGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: PSQASGIWVWFG*AGAYSTKVGWS
Trigger: AGACCAGCCAACCTTTGTGGAATAAGCCCCAGCCCAGCCAAACCAAACCCAGATGCCTGAGGCCTGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTCCCCTCCCTGCAATTaGTCCAGCTGGTGTACCTCC +
Preference number: 3 (lower is better)
Translates to: TQARLPHMKTARDFLSRASPPCN*SSWCTS
Trigger: GGAGGTACACCAGCTGGACAAATTGCAGGGAGGGGA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGACAGAGGGGCCGGGTaGGCCCTCGCTCCCTCCCCT +
Preference number: 3 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMDRGAG*ALAPSP
Trigger: AGGGGAGGGAGCGAGGGCCAACCCGGCCCCTCTGTC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCTGCCCTCCGCCACCTaGCGCCCAGCCCCGTCTCTC +
Preference number: 3 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMLPSAT*RPAPSL
Trigger: GAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCAG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 3 (lower is better)
Translates to: TQARLPHMKTARDFLSRALSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR TCA 72 bp GGAAACCTATCCCAGGACACCCTGCTTTGGCCTGGATaGACATCGTGGCTTCAGTACGCGCCATCCTGCGAT +
Preference number: 3 (lower is better)
Translates to: GNLSQDTLLWPG*TSWLQYAPSCD
Trigger: ATCGCAGGATGGCGCGTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGACCCCAGCACTGAGCTaGCCGGGCTTAGCTACCTCA +
Preference number: 3 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQTPALS*PGLATS
Trigger: TGAGGTAGCTAAGCCCGGCAAGCTCAGTGCTGGGGT...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCCCTGCCTCCTCTTCTaGTGCTGGTGGATTCTCCAG +
Preference number: 3 (lower is better)
Translates to: NMGMHCDLFALSPRSERGPCLLF*CWWILQ
Trigger: CTGGAGAATCCACCAGCACAAGAAGAGGAGGCAGGG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGCATCTGGGTTTGGTTaGGCTGGGCTGGGGCTTATT +
Preference number: 3 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAASGFG*AGLGLI
Trigger: AATAAGCCCCAGCCCAGCCAAACCAAACCCAGATGC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CCA 72 bp AGACAGCAAGCAGCCACCTCACTGGAGACCCTTGGATaGCTGAGAACCAACCCCAAAGTGAACATAGTGCAA +
Preference number: 3 (lower is better)
Translates to: RQQAATSLETLG*LRTNPKVNIVQ
Trigger: TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAGGTGGCTGCTTGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 3 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQLSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGCATCTGGGTTTGGTTaGGCTGGGCTGGGGCTTATT +
Preference number: 3 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAASGFG*AGLGLI
Trigger: AATAAGCCCCAGCCCAGCCAAACCAAACCCAGATGC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 3 (lower is better)
Translates to: IPLGEIYNKLHSSPALCALSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAAGTCCCGGCTTGGCTTaGGATTGGTTTTGTCCACTG +
Preference number: 3 (lower is better)
Translates to: IPLGEIYNKLHSSPALCASPGLA*DWFCPL
Trigger: CAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGCAGCCGCCTGGCCCTaGTCAGCGACCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPAAAWP*SATCGG
Trigger: GCCTCCGCAGGTCGCTGATCAGGGCCAGGCGGCTGC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGCCGCAGGCGCCGCTaGCAGAATGGGCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGRRRR*QNGPPQ
Trigger: CTGAGGGGGCCCATTCTGGCAGCGGCGCCTGCGGCC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGCCGCCCCCTCCCAGTaGATGCAGGTGCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPAAPSQ*MQVPRL
Trigger: GAGGCGGGGCACCTGCATGCACTGGGAGGGGGCGGC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGGGCTGGGACTCGGCTaGCTCAGCGAGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPGLGLG*LSERQL
Trigger: CAGCTGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGCCCCCTCCGTGGCATaGCCACAGTGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPAPSVA*PQCPAG
Trigger: CCCCGCAGGACACTGTGGCCATGCCACGGAGGGGGC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGGGGTCTCTGGGCCCTaGAGGGTGGGCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPGVSGP*RVGIQL
Trigger: GAGCTGGATGCCCACCCTTCAGGGCCCAGAGACCCC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGGGCCAGGGCCCTCGTaGCCCACACCGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRGPGPS*PTPVVS
Trigger: TGAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGCGAGGTCTCCTCGGTaGCACAGTCCACCCCCGACG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPARSPR*HSPPPT
Trigger: CGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTGCCCTCCGCCACCTTaGGCCCAGCCCCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRCPPPP*AQPRLS
Trigger: GGAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACCTCAGCAGAGCCGCTaGAGGGATCACCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPPQQSR*RDHPAG
Trigger: GCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGCCAGGGTTGGGGTTaGCACCAGGCCGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGQGWG*HQAAVG
Trigger: CCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGGGGTCTCTGGGCCCTaGAGGGTGGGCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRGVSGP*RVGIQL
Trigger: GAGCTGGATGCCCACCCTTCAGGGCCCAGAGACCCC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGGGTGGGTCCACGGGTaGTGGGCTCTGGGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRGWVHG*WALGPL
Trigger: TAGAGGCCCCAGAGCCCATCACCCGTGGACCCACCC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTTGGCGCAGCGCCTCTaGAGTCGCTGCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPLAQRL*SRCCSR
Trigger: GCGGCTGCAGCAGCGACTGCAGAGGCGCTGCGCCAA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCCGACGACAGCAGGCTaGTGGCTTCCAGCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPPTTAG*WLPARP
Trigger: CGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCTGGGGAGGCTGGAATaGCGGCCGGCCCAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRLGRLE*RPAQWF
Trigger: GAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCCCCCTCCCAGTGCATaGAGGTGCCCCGCCTCACGT +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRPPPSA*RCPASR
Trigger: ACGTGAGGCGGGGCACCTGCATGCACTGGGAGGGGG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGCCGCCCCCTCCCAGTaGATGCAGGTGCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSAAPSQ*MQVPRL
Trigger: GAGGCGGGGCACCTGCATGCACTGGGAGGGGGCGGC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCACGCAGCTCCGTGAGTaGGCGGCACAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPTQLRE*AAQEAG
Trigger: CCCAGCCTCCTGTGCCGCGCACTCACGGAGCTGCGT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGAAGCCCAGCTCTCTGTaGAGAGCCCGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRKPSSL*RARAPA
Trigger: CGCTGGGGCCCGGGCTCTGCACAGAGAGCTGGGCTT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGGAGGCGGCTAGCTaGGTGCTCGCCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSQEAAS*VLAGAG
Trigger: CCCAGCCCCGGCGAGCACCCAGCTAGCCGCCTCCTG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACGTCATCCTCTCGCTaGGGCCGCTGCCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTSSSR*GRCPAW
Trigger: CCATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGGTCCGAGTAAGGGGTaGGATGGGCGGTATCCCGGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPGPSKG*DGRYPG
Trigger: CCCGGGATACCGCCCATCCCACCCCTTACTCGGACC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCAAAGCCAGGCCACCGTaGGCACGGCCGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPKARPP*ARPAPP
Trigger: TGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCGCCGCTGCCAGAATaGGCCCCCTCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRAPLPE*APSELG
Trigger: TCCCAGCTCTGAGGGGGCCCATTCTGGCAGCGGCGC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGTGCCCCGCCTCACGTaGAGGGCACCGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRVPRLT*RAPSRR
Trigger: CCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCAC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGAGGCACAAAGCGTGTaGCAGAGGGGGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPEAQSV*QRGLLP
Trigger: GGGCAGGAGCCCCCTCTGCCACACGCTTTGTGCCTC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCATGCACTCCAGAGCTaGGCCAGGGCCACCGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRHALQS*ARATGH
Trigger: GTGGCCGGTGGCCCTGGCCCAGCTCTGGAGTGCATG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGCAGGTGCTCGTTCTaGCTGGCGGGCAGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGRCSF*LAGSCG
Trigger: TCCGCAGCTGCCCGCCAGCCAGAACGAGCACCTGCC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGCAGCCGCCTGGCCCTaGTCAGCGACCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWAAAWP*SATCGG
Trigger: GCCTCCGCAGGTCGCTGATCAGGGCCAGGCGGCTGC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR TCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGCAGCCGCCTGGCCCTaGTCAGCGACCTGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDAAAWP*SATCGG
Trigger: GCCTCCGCAGGTCGCTGATCAGGGCCAGGCGGCTGC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAAAAGGTTGGCTGGTCTaGGGCCCTGACCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPKGWLV*GPDQGG
Trigger: CCCGCCTTGGTCAGGGCCTCAGACCAGCCAACCTTT...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGGGCCAGGGCCCTCGTaGCCCACACCGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSGPGPS*PTPVVS
Trigger: TGAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCGCAGGCGCCGCTaGCAGAATGGGCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDGRRRR*QNGPPQ
Trigger: CTGAGGGGGCCCATTCTGGCAGCGGCGCCTGCGGCC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGCCCTCCGCCACCTTaGGCCCAGCCCCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSCPPPP*AQPRLS
Trigger: GGAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAACACAGAACCCACACTaGCCTCCGCCACCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPTQNPH*PPPPCA
Trigger: GGCGCAAGGTGGCGGAGGGCAGTGTGGGTTCTGTGT...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCCAGCGTCCGATTCCTaGCTGAGCCTGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPPASDS*LSLDWP
Trigger: CGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCACACTGCCAGGCCGCTaGGGCCCAAAGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSTLPGR*GPKCPR
Trigger: GCGGGGGCACTTTGGGCCGCAGCGGCCTGGCAGTGT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTGGCTGGCGGGCAGCTaGGGACACTGGGCGAACACT +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRWLAGS*GHWANT
Trigger: AGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCAGGAGGCGGCTAGCTaGGTGCTCGCCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWQEAAS*VLAGAG
Trigger: CCCAGCCCCGGCGAGCACCCAGCTAGCCGCCTCCTG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCACTCCGGCCCGGCTTaGCGCAGCGCCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSHSGPA*RSASAV
Trigger: GACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGAGGGATCACCCGGCTaGCGGTCACCACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRREGSPG*RSPQTA
Trigger: GGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCACGACAGCAGGCTGCTaGCTTCCAGCGCGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPTTAGC*LPARPS
Trigger: GGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACGACAGCAGGCTGCTaGCTTCCAGCGCGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTTAGC*LPARPS
Trigger: GGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGCTCCTGCATGCAGCTaGCCTGCACACCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPAPACS*PAHQPP
Trigger: TGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGAGGCACAAAGCGTGTaGCAGAGGGGGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRREAQSV*QRGLLP
Trigger: GGGCAGGAGCCCCCTCTGCCACACGCTTTGTGCCTC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGTGCTCGTTCTGGCTaGCGGGCAGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGARSG*RAAADT
Trigger: AGTGTCCGCAGCTGCCCGCCAGCCAGAACGAGCACC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCGGTATCCCGGGGGCTaGGGAGAGAGGGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWRYPGG*GERAGW
Trigger: CCAACCCGCCCTCTCTCCTCAGCCCCCGGGATACCG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTCAGCGAGCGGCAGCTaGTCCTGCGGATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRSASGS*SCGWSA
Trigger: TGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGGCCTGTCCCAGGGCTaGGTGGGGAGCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWGLSQG*VGSCSL
Trigger: GAGGGAGCAGCTCCCCACTCAGCCCTGGGACAGGCC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTTCCATGGCTTCAGCTaGCCTGCAGGGGCCGCCGAA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRFHGFS*PAGAAE
Trigger: TTCGGCGGCCCCTGCAGGGCAGCTGAAGCCATGGAA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTTGGCGCAGCGCCTCTaGAGTCGCTGCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLAQRL*SRCCSR
Trigger: GCGGCTGCAGCAGCGACTGCAGAGGCGCTGCGCCAA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGAGTGCAAGGCCACAGTaGAGCAGCCCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSARPQ*SSPAAG
Trigger: CCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACT...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCACACAGAACCCACACTaGCCTCCGCCACCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPTQNPH*PPPPCA
Trigger: GGCGCAAGGTGGCGGAGGGCAGTGTGGGTTCTGTGT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCAAGCCCAGCTCTCTGTaGAGAGCCCGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSKPSSL*RARAPA
Trigger: CGCTGGGGCCCGGGCTCTGCACAGAGAGCTGGGCTT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTCCTTCAGGGCCAGCTaGGCCTCCACGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSSFRAS*ASTRWH
Trigger: GTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAGGA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCCTCAGCAGAGCCGCTaGAGGGATCACCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSPQQSR*RDHPAG
Trigger: GCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGGCACCAGGCCGCTGTaGGGTGGGTCCACGGGTGAT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSGTRPL*GGSTGD
Trigger: ATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCCGACTGGCCAGGGTTaGGGTTGGCACCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSPTGQG*GWHQAA
Trigger: AGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGGCTCCAGTAGCTCTTaGGCTCCTTCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPGSSSS*APSQPR
Trigger: CCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGCGCCGCTGCCAGAATaGGCCCCCTCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSAPLPE*APSELG
Trigger: TCCCAGCTCTGAGGGGGCCCATTCTGGCAGCGGCGC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGGCTGCGGGCAAGGTaGCTTGGAAGAGACGGCATG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGLRAR*LGRDGM
Trigger: CATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGCCTGAGCCTGGACTaGCCGGGCAGTAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPCLSLD*PGSSAT
Trigger: AGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 72 bp GCGGCACAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTaGGCTTTGGATTGGTTTTGTCCACTGCCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: AAQEAGSAASPG*ALDWFCPLPPP
Trigger: CGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGAGGGGACCCACCGGCTaGCTCCCCAGTGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWRGPTG*LPSAIL
Trigger: GAGGATGGCACTGGGGAGTCAGCCGGTGGGTCCCCT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCAGCCAGAGACTTCCTaGGCAGGGCTGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRQPETS*AGLALS
Trigger: AGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCCCGGCTTCCCCACATaGAGACAGCCAGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPPGFPT*RQPETS
Trigger: GGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAATGGCTGCCTCCATTTaGGGAGAGAGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPMAASI*GESTGP
Trigger: TGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCAT...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGACTACGCAGCTCCGTaGGTGCGCGGCACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDDYAAP*VRGTGG
Trigger: GCCTCCTGTGCCGCGCACTCACGGAGCTGCGTAGTC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCAGTGCCCCCGCTGCGTaGTCCAGCAGAGGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSSAPAA*SSRGPS
Trigger: AGACGGACCTCTGCTGGATCACGCAGCGGGGGCACT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCCACCTCCATGCTGTaGAGCAGCGTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRATSML*SSVSSF
Trigger: GAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATGTGTCATCGGCTGCTaGAAAGCCACTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPCVIGC*KATVCP
Trigger: GGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCGACGACAGCAGGCTaGTGGCTTCCAGCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWPTTAG*WLPARP
Trigger: CGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGAGGCCGAAGGAGCTGTaGAGCGAGGTCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRRPKEL*SEVSSV
Trigger: CACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCT...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGCCGCAGGCGCCGCTaGCAGAATGGGCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGRRRR*QNGPPQ
Trigger: CTGAGGGGGCCCATTCTGGCAGCGGCGCCTGCGGCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCTGGGGAGGCTGGAATaGCGGCCGGCCCAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDLGRLE*RPAQWF
Trigger: GAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCTCTGCCACGCCCCTaGCTAGGAAACCTATCCCAG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRALPRP*LGNLSQ
Trigger: CTGGGATAGGTTTCCTAGGCAGGGGCGTGGCAGAGC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGGGAGCAGGGAGGCTaGAGGGCGCCTACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSWEQGG*RAPTCS
Trigger: AGAGCAGGTAGGCGCCCTGCAGCCTCCCTGCTCCCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATACGCAGCTCCGTGAGTaGGCGGCACAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDTQLRE*AAQEAG
Trigger: CCCAGCCTCCTGTGCCGCGCACTCACGGAGCTGCGT...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCATGGCCATGAGGCTGTaGGTCCGAGTAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPMAMRL*VRVRGG
Trigger: CCCACCCCTTACTCGGACCCACAGCCTCATGGCCAT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGATGGCCATGAGGCTGTaGGTCCGAGTAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRMAMRL*VRVRGG
Trigger: CCCACCCCTTACTCGGACCCACAGCCTCATGGCCAT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTGGAGCGCCTTGGCGTaGGACTGCTGTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRWSALA*DCCHCP
Trigger: AGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATTGGCCATGCCATTCTaGGCCACCTCCATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLAMPF*ATSMLC
Trigger: GCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCCTCAGCAGAGCCGCTaGAGGGATCACCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDPQQSR*RDHPAG
Trigger: GCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTCTCATAGGTGTTGCTaGCAGGGAAGCGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRSHRCC*QGSGGP
Trigger: TGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTCTCATAGGTGTTGCTaGCAGGGAAGCGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPSHRCC*QGSGGP
Trigger: TGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGCGGGCAAGGTGGCTTaGAAGAGACGGCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPAGKVA*KRRHGV
Trigger: CACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGCAGTCTGGGGAGGCTaGAATGCCGGCCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWAVWGG*NAGRPS
Trigger: ACTGGGCCGGCCGGCATTCCAGCCTCCCCAGACTGC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGGTGGATTCTCCAGCTaGGAGCTGGGACTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRGGFSS*ELGLRQ
Trigger: CTGCCTGAGTCCCAGCTCCCAGCTGGAGAATCCACC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTCCAACCCCCAGAGGTaGGGCCTAGCCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPSNPQR*GLASEE
Trigger: CTCTTCAGAGGCTAGGCCCCACCTCTGGGGGTTGGA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCGTGACCCACACCGGTaGTCTCAGGCCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPRDPHR*SQARTG
Trigger: TCCTGTTCTGGCCTGAGACCACCGGTGTGGGTCACG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCGCACCTCCACCGCCTaGAGCCTCACAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWRTSTA*SLTGSL
Trigger: CAGGCTGCCTGTGAGGCTCCAGGCGGTGGAGGTGCG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGTGGAGAGGTGCGCCTaGAGGCAGGAAGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPVERCA*RQEEEA
Trigger: TGCCTCTTCTTCCTGCCTCCAGGCGCACCTCTCCAC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCGCACGCTCACAGGTaGAGAGGTGCGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWPHAHR*RGAPGG
Trigger: GCCTCCAGGCGCACCTCTCCACCTGTGAGCGTGCGG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
3UTR CAA 72 bp TTGCGCCCAGCCCCGTCTCTCCTCCAGCCTGTGGCCTaGACTGAGCTCCTGAGTCCCAAGGTGGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LRPAPSLLQPVA*TELLSPKVGSS
Trigger: ACTGCTGCCCACCTTGGGACTCAGGAGCTCAGTCAAGGCCACAGGCTGGAGGAGAGACGGGGCTGGGCGCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
3UTR CAA 72 bp GGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTTGGATaGGTTTTGTCCACTGCCCCCTCCGTGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: GWVRSQSRLGFG*VLSTAPSVAWP
Trigger: TGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCAGAGGTGCGCCTGCGTaGTCCAGCAGAGGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSRGAPA*SSRGPS
Trigger: AGACGGACCTCTGCTGGATCACGCAGGCGCACCTCT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGGGCACCTGTCCCCTaGCTCAGGGTCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSWAPVP*LRVCPT
Trigger: TGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGCCAGAGACTTCCTaGGCAGGGCTGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSQPETS*AGLALS
Trigger: AGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGTTGGAGCATTGGGGTaGGGGCAAGCAACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRVGALG*GQATLA
Trigger: TGCCAAGGTTGCTTGCCCTCACCCCAATGCTCCAAC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTCAGGGCATGGCACCTaGGCAGCAGCTGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWSGHGT*AAAAAP
Trigger: AGGTGCGGCAGCTGCTGCTCAGGTGCCATGCCCTGA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTTCCATGGCTTCAGCTaGCCTGCAGGGGCCGCCGAA +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSFHGFS*PAGAAE
Trigger: TTCGGCGGCCCCTGCAGGGCAGCTGAAGCCATGGAA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCTACGAGCCAGGCCTaGTTCTTCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSTSQA*FFPRTL
Trigger: CAGGGTCCTGGGGAAGAAGCAGGCCTGGCTCGTAGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCACAGGTGGAGAGGTaGGCCTGCGTGATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSQVER*ACVIQQ
Trigger: CTGCTGGATCACGCAGGCGCACCTCTCCACCTGTGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCATCCTCCTTGGCCATaGCATTCTGGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPHPPWP*HSGPPP
Trigger: TGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCGGCTGACTCCCCAGTaGCATCCTCCTTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSRLTPQ*HPPWPC
Trigger: GCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGCCGCCCCCTCCCAGTaGATGCAGGTGCCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLAAPSQ*MQVPRL
Trigger: GAGGCGGGGCACCTGCATGCACTGGGAGGGGGCGGC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCAGCGTCCGATTCCTaGCTGAGCCTGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWPASDS*LSLDWP
Trigger: CGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTTGGCCCCAGAACCTTaGAGTTTGTCCCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPLAPEP*SLSHPS
Trigger: GGAGGGGTGGGACAAACTGCAAGGTTCTGGGGCCAA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGACACTGGGCGAACACTaGCAGGCCGCTGCGGCCCAA +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWTLGEH*QAAAAQ
Trigger: TTGGGCCGCAGCGGCCTGGCAGTGTTCGCCCAGTGT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACACTCCGGCCCGGCTTaGCGCAGCGCCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRHSGPA*RSASAV
Trigger: GACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCATCAACTTCCCAGTTaGCCCGTGGTTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPHQLPS*PVVRGF
Trigger: GAAGCCCCGAACCACGGGCCAACTGGGAAGTTGATG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTCCGAGTAAGGGGTaGGATGGGCGGTATCCCGGG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDGPSKG*DGRYPG
Trigger: CCCGGGATACCGCCCATCCCACCCCTTACTCGGACC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGGTCCGAGTAAGGGGTaGGATGGGCGGTATCCCGGG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWGPSKG*DGRYPG
Trigger: CCCGGGATACCGCCCATCCCACCCCTTACTCGGACC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGGAGCGCCTTGGCGTaGGACTGCTGTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSWSALA*DCCHCP
Trigger: AGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGGGGGCTTGATGCCATaGTTGTCACTGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRGGLMP*LSLHSV
Trigger: CACGCTGTGCAGTGACAACCATGGCATCAAGCCCCC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCCGGGTCACTCAGCTTaGTGTAGGTGGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSPGHSA*CRWSCG
Trigger: CCCGCAGCTCCACCTACACCAAGCTGAGTGACCCGG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTCTGTCCCACAGACCTaGGCCTGGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPSVPQT*AWVTFS
Trigger: GGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCCTCCTCCTCTTCCATaGGGCACACCACGCTCACCG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSPPPLP*GTPRSP
Trigger: CGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGGGCTGGGACTCGGCTaGCTCAGCGAGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRGLGLG*LSERQL
Trigger: CAGCTGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGGGCTGGGACTCGGCTaGCTCAGCGAGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPGLGLG*LSERQL
Trigger: CAGCTGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGAGGTGGGCAGCAGTCTaGGGAGGCTGGAATGCCGGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWRWAAV*GGWNAG
Trigger: GCCGGCATTCCAGCCTCCCCAGACTGCTGCCCACCT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACTGGGGGACTCAGTATaGTCCCGGGAAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLGDSV*SREKSW
Trigger: CCAACTCTTTTCCCGGGACCATACTGAGTCCCCCAG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 72 bp CAGGAGGCTGGGTCCGCAGCCAGTCCCGGCTTGGCTTaGGATTGGTTTTGTCCACTGCCCCCTCCGTGGCAT +
Preference number: 4 (lower is better)
Translates to: QEAGSAASPGLA*DWFCPLPPPWH
Trigger: ATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGACCCAGCCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAAGGGGACCCACCGGCTaGCTCCCCAGTGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPRGPTG*LPSAIL
Trigger: GAGGATGGCACTGGGGAGTCAGCCGGTGGGTCCCCT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGGGTCTCTGGGCCCTaGAGGGTGGGCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGVSGP*RVGIQL
Trigger: GAGCTGGATGCCCACCCTTCAGGGCCCAGAGACCCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCTCCCAGCCTGCAGATaGGATGGCCTCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRLPACR*DGLTLE
Trigger: TTCCAAGGTGAGGCCATCTCATCTGCAGGCTGGGAG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGACTACGCAGCTCCGTaGGTGCGCGGCACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRADYAAP*VRGTGG
Trigger: GCCTCCTGTGCCGCGCACTCACGGAGCTGCGTAGTC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGGGCCAGGGCCCTCGTaGCCCACACCGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEGPGPS*PTPVVS
Trigger: TGAGACCACCGGTGTGGGTCACGAGGGCCCTGGCCC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACGTCCGATTCCTGCCTaGGCCTGGACTGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPRPIPA*AWTGRA
Trigger: TGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACAGGGGCCGCCGAATTaGTCTCCCGAGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPQGPPN*SPEPLQ
Trigger: CTGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCTTTCAGGTGCCGGATaGACACCTCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPLSGAG*TPPSAA
Trigger: TGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCATCCTCCTTGGCCATaGCATTCTGGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRHPPWP*HSGPPP
Trigger: TGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCAGTGTGTCATCGGCTaGTGCAAAGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPQCVIG*CKATVC
Trigger: GCAGACAGTGGCTTTGCAGCAGCCGATGACACACTG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCCGACGACAGCAGGCTaGTGGCTTCCAGCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAPTTAG*WLPARP
Trigger: CGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCGAGGTCTCCTCGGTaGCACAGTCCACCCCCGACG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPARSPR*HSPPPT
Trigger: CGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGCACACCAGCCTCCATaGCACACAGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPAHQPP*HTAASH
Trigger: ATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGGCCGCAGGCGCCGCTaGCAGAATGGGCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEGRRRR*QNGPPQ
Trigger: CTGAGGGGGCCCATTCTGGCAGCGGCGCCTGCGGCC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTGGGGAGGCTGGAATaGCGGCCGGCCCAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALGRLE*RPAQWF
Trigger: GAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATGCCCTCCGCCACCTTaGGCCCAGCCCCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPCPPPP*AQPRLS
Trigger: GGAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATGCAGGGCGCCTACCTaGTCTGCCACGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRCRAPT*SATPLP
Trigger: AGGCAGGGGCGTGGCAGAGCAGGTAGGCGCCCTGCA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACCCCCTCCCAGTGCATaGAGGTGCCCCGCCTCACGT +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRPPPSA*RCPASR
Trigger: ACGTGAGGCGGGGCACCTGCATGCACTGGGAGGGGG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTACGCAGCTCCGTGAGTaGGCGGCACAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRATQLRE*AAQEAG
Trigger: CCCAGCCTCCTGTGCCGCGCACTCACGGAGCTGCGT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCTGAGCACACACACATaGACTCCAGAGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRLSTHT*TPELGQ
Trigger: CTGGCCCAGCTCTGGAGTGCATGTGTGTGTGCTCAG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACACCTGAGCAGCAGCTaGCGCACCTCCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRHLSSS*RTSTAW
Trigger: CCAGGCGGTGGAGGTGCGGCAGCTGCTGCTCAGGTG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACACCTGAGCAGCAGCTaGCGCACCTCCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPHLSSS*RTSTAW
Trigger: CCAGGCGGTGGAGGTGCGGCAGCTGCTGCTCAGGTG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGCCCCATGTGTACCCTaGCTCTTCAGGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSAPCVP*LFRAWH
Trigger: GTGCCATGCCCTGAAGAGGCAGGGTACACATGGGGC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAAGCCCAGCTCTCTGTaGAGAGCCCGGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAKPSSL*RARAPA
Trigger: CGCTGGGGCCCGGGCTCTGCACAGAGAGCTGGGCTT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGGAAGAAGAGGCAGGTaGTCGTTCTGGCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWGRRGR*SFWLAG
Trigger: GCCCGCCAGCCAGAACGAGCACCTGCCTCTTCTTCC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCACTCCGGCCCGGCTTaGCGCAGCGCCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEHSGPA*RSASAV
Trigger: GACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACAGCGTGTATTTCATaGAGCGCCTTGGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTACIS*SALAWD
Trigger: GTCCCACGCCAAGGCGCTCCATGAAATACACGCTGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATCCTTCAGGGCCAGCTaGGCCTCCACGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPSFRAS*ASTRWH
Trigger: GTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAGGA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCAGTGCCATCCTCCTTaGCCATGCCATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRQCHPP*PCHSGP
Trigger: TGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCGAAGTCTGTCTGGATaGCACGCTCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRRSLSG*HAPACS
Trigger: GCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTGCACGAAGTCTGTCTaGATGGCACGCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRCTKSV*MARSCM
Trigger: CATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCCACAGACCTGGGCCTaGGTCACTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRPQTWA*VTFSRM
Trigger: CATCCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGCACCAGGCCGCTGTaGGGTGGGTCCACGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGTRPL*GGSTGD
Trigger: ATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGCCAGGGTTGGGGTTaGCACCAGGCCGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGQGWG*HQAAVG
Trigger: CCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGCCAGGGTTGGGGTTaGCACCAGGCCGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPGQGWG*HQAAVG
Trigger: CCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGACCACGCTCACCGACTaGCCAGGGTTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWTTLTD*PGLGLA
Trigger: TGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTGGT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCCTCCTCCTCTTCCATaGGGCACACCACGCTCACCG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDPPPLP*GTPRSP
Trigger: CGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAAAGCCAGGCCACCGTaGGCACGGCCGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAKARPP*ARPAPP
Trigger: TGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCGCCGCTGCCAGAATaGGCCCCCTCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPAPLPE*APSELG
Trigger: TCCCAGCTCTGAGGGGGCCCATTCTGGCAGCGGCGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATGCAATTTGTCCAGCTaGTGTACCTCCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPCNLSS*CTSCLG
Trigger: CCCAAGGCAGGAGGTACACCAGCTGGACAAATTGCA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCAGGGCAGGGGCCTATaGGCAACTCAAGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDQGRGL*ATQARL
Trigger: AAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCTGCACTTCAGGCCATaGCTGCCTCCATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRLHFRP*LPPFEE
Trigger: CTCCTCAAATGGAGGCAGCCATGGCCTGAAGTGCAG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGCAGTCTGGGGAGGCTaGAATGCCGGCCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQAVWGG*NAGRPS
Trigger: ACTGGGCCGGCCGGCATTCCAGCCTCCCCAGACTGC...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCTCGGGGCAAGTTTCTaGGGGCAGTCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLGASF*GQSWPL
Trigger: CAGAGGCCATGACTGCCCCCAGAAACTTGCCCCGAG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACGACTGGCCTTGGGCTaGGAGCAGGGAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRRLALG*EQGGCR
Trigger: CCTGCAGCCTCCCTGCTCCCAGCCCAAGGCCAGTCG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTCCCGGGAAAAGAGTTaGGGCAGTGAACTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPSREKS*GSELPR
Trigger: CCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGTGCCCCGCCTCACGTaGAGGGCACCGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRVPRLT*RAPSRR
Trigger: CCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCAC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTCCACAAAGGTTGGCTaGTCTGAGGCCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRSTKVG*SEALTK
Trigger: CTTGGTCAGGGCCTCAGACCAGCCAACCTTTGTGGA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCAGGCATCTGGGTTTaGTTTGGCTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSGIWV*FGWAGA
Trigger: AGCCCCAGCCCAGCCAAACCAAACCCAGATGCCTGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCCCCCTCCGTGGCATaGCCACAGTGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPAPSVA*PQCPAG
Trigger: CCCCGCAGGACACTGTGGCCATGCCACGGAGGGGGC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGGCTTGGCTTTGGATTaGTTTTGTCCACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPGLALD*FCPLPP
Trigger: AGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACAGCCAGTCCCGGCTTaGCTTTGGATTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPQPVPA*LWIGFV
Trigger: GACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCGCGGCACAGGAGGCTaGGTCCGCAGCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADRGTGG*VRSQSR
Trigger: CCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACATGCACTCCAGAGCTaGGCCAGGGCCACCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPHALQS*ARATGH
Trigger: GTGGCCGGTGGCCCTGGCCCAGCTCTGGAGTGCATG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGAAAAGGGTCACTGTaGAGGGTGAGCTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGKGSL*RVSSLR
Trigger: CCTGAGAGAGCTCACCCTCCACAGTGACCCTTTTCC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCAGGAGAAGCCACGTCTaGCCGCTAGGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSRRSHV*PLGSRR
Trigger: CCTTCTGGAGCCTAGCGGCCAGACGTGGCTTCTCCT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAAGGAGCAGGGCCTCCTaGCTGCCGGCACCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRRSRAS*LPAPSL
Trigger: AAGACTCGGTGCCGGCAGTCAGGAGGCCCTGCTCCT...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCCTCCACCAGTGAATTaGATAGGGCTGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRPPPVN*IGLVHR
Trigger: CCTGTGCACCAGCCCTATTCAATTCACTGGTGGAGG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCCGGGGTCGGGGGCTTaGTGCCATGGTTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAPGSGA*CHGCHC
Trigger: GCAGTGACAACCATGGCATCAAGCCCCCGACCCCGG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGGGGTCTCTGGGCCCTaGAGGGTGGGCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEGVSGP*RVGIQL
Trigger: GAGCTGGATGCCCACCCTTCAGGGCCCAGAGACCCC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCCCGGCTTCCCCACATaGAGACAGCCAGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDPGFPT*RQPETS
Trigger: GGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCTCCCAGCCTGCAGATaGGATGGCCTCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLPACR*DGLTLE
Trigger: TTCCAAGGTGAGGCCATCTCATCTGCAGGCTGGGAG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCAAAGAGTTGGGGCAGTaGACTTCCCAGGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSKELGQ*TSQADW
Trigger: CCAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCAGGAGCAGAGGGGCCTaGAGCTTGACTAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPRSRGA*SLTKFQ
Trigger: CTGGAATTTAGTCAAGCTTCAGGCCCCTCTGCTCCT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCATAGATGCGGGATCTaGGCACACACACATGCACTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRHRCGI*AHTHAL
Trigger: GAGTGCATGTGTGTGTGCTCAGATCCCGCATCTATG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTCAGGGCATGGCACCTaGGCAGCAGCTGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSGHGT*AAAAAP
Trigger: AGGTGCGGCAGCTGCTGCTCAGGTGCCATGCCCTGA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGTCACTGTGGAGGGTaGGCTCTCTCAGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGHCGG*ALSGGG
Trigger: GCCTCCCCCTGAGAGAGCTCACCCTCCACAGTGACC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACGTCCGATTCCTGCCTaGGCCTGGACTGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPRPIPA*AWTGRA
Trigger: TGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGGCCGCCGAATTaGTCTCCCGAGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEQGPPN*SPEPLQ
Trigger: CTGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTCTGCAGTCGCTGCTaGAGCCGCCTGGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALCSRC*SRLALI
Trigger: GATCAGGGCCAGGCGGCTGCAGCAGCGACTGCAGAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCACCCACACACCCCCTTaGTGTTCAGTCCTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSTHTPP*CSVLPL
Trigger: GAGAGGGAGGACTGAACAGCAAGGGGGTGTGTGGGT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTCTCGCTGGGGCCGCTaGCCGGCATGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSRWGR*PAWLLF
Trigger: GAAGAGAAGCCATGCCGGGCAGCGGCCCCAGCGAGA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTCTCGCTGGGGCCGCTaGCCGGCATGGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRASRWGR*PAWLLF
Trigger: GAAGAGAAGCCATGCCGGGCAGCGGCCCCAGCGAGA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGGGACTGCTGTCACTaGCCTTGTAGGAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPWDCCH*PCRSQN
Trigger: ATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATGCATGCGTGACAGCTaGGTCTTCAGGTCATCAATC +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPCMRDS*VFRSSI
Trigger: GATTGATGACCTGAAGACGCAGCTGTCACGCATGCA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCAATCCAGTCCTCCTaGATGCGTGACAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSIQSS*MRDSCV
Trigger: GACGCAGCTGTCACGCATGCAGGAGGACTGGATTGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTCTGGGCCACCTCCATaGTGTGCAGCAGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDSGPPP*CAAASP
Trigger: TGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCGAGGTCTCCTCGGTaGCACAGTCCACCCCCGACG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPARSPR*HSPPPT
Trigger: CGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGCTTCTCATAGGTGTTaGTGGCAGGGAAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWASHRC*WQGSGG
Trigger: GCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTGGATGGCACGCTCCTaGATGCAGCTGGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDWMARS*MQLACT
Trigger: TGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCAGGTCAGGCTGGTACTaGACGAAGTCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPRSGWY*TKSVWM
Trigger: CATCCAGACAGACTTCGTGCAGTACCAGCCTGACCT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWSWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACTTCAGGCCATGGCTaGCTCCATTTGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTSGHG*LHLRRE
Trigger: CTCTCTCCTCAAATGGAGGCAGCCATGGCCTGAAGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCTGGGGAGGCTGGAATaGCGGCCGGCCCAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPELGRLE*RPAQWF
Trigger: GAACCACTGGGCCGGCCGGCATTCCAGCCTCCCCAG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGCCTCCTCTTCTTGTaGTGGTGGATTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPCLLFL*WWILQL
Trigger: CAGCTGGAGAATCCACCAGCACAAGAAGAGGAGGCA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGCCCCCTTGGGTTTCTaGCCCTGCCTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDAPLGF*PCLLFL
Trigger: CAAGAAGAGGAGGCAGGGGCAGAAACCCAAGGGGGC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTGCAGGGCGCCTACCTaGTCTGCCACGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLCRAPT*SATPLP
Trigger: AGGCAGGGGCGTGGCAGAGCAGGTAGGCGCCCTGCA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTGGGAGCAGGGAGGCTaGAGGGCGCCTACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQWEQGG*RAPTCS
Trigger: AGAGCAGGTAGGCGCCCTGCAGCCTCCCTGCTCCCA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCATTGGTTTTGTCCACTaGCCCCTCCGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSIGFVH*PLRGMA
Trigger: GGCCATGCCACGGAGGGGGCAGTGGACAAAACCAAT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCGCTGCGGCCCAAAGTaGCCCCGCTGCGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPERCGPK*PRCVIQ
Trigger: CTGGATCACGCAGCGGGGGCACTTTGGGCCGCAGCG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGAACCCCAAATTAGGATaGGCTGGTCTCGCCGACCAT +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRNPKLG*AGLADH
Trigger: ATGGTCGGCGAGACCAGCCCATCCTAATTTGGGGTT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGATGGCCATGAGGCTGTaGGTCCGAGTAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWMAMRL*VRVRGG
Trigger: CCCACCCCTTACTCGGACCCACAGCCTCATGGCCAT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTTTCATGGAGCGCCTTaGCGTGGGACTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRFHGAP*RGTAVT
Trigger: AGTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGACAGCGTGTATTTCATaGAGCGCCTTGGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRTACIS*SALAWD
Trigger: GTCCCACGCCAAGGCGCTCCATGAAATACACGCTGT...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTTGGCCATGCCATTCTaGGCCACCTCCATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLAMPF*ATSMLC
Trigger: GCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGAGGGATCACCCGGCTaGCGGTCACCACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAEGSPG*RSPQTA
Trigger: GGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACCTCAGCAGAGCCGCTaGAGGGATCACCCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPPQQSR*RDHPAG
Trigger: GCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTCTCATAGGTGTTGCTaGCAGGGAAGCGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWSHRCC*QGSGGP
Trigger: TGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGTGTCAAGGTCAGGCTaGTACTGCACGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRVSRSG*YCTKSV
Trigger: GACAGACTTCGTGCAGTACCAGCCTGACCTTGACAC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCACCACTGCTGAGTTaGGGTCTCTGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWPPLLS*GLWALK
Trigger: CTTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCCACCACTGCTGAGTTaGGGTCTCTGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDPPLLS*GLWALK
Trigger: CTTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGCACCAGGCCGCTGTaGGGTGGGTCCACGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGTRPL*GGSTGD
Trigger: ATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCCGACTGGCCAGGGTTaGGGTTGGCACCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLPTGQG*GWHQAA
Trigger: AGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGGGCTGGGACTCGGCTaGCTCAGCGAGCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEGLGLG*LSERQL
Trigger: CAGCTGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGCGCCGCTGCCAGAATaGGCCCCCTCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLAPLPE*APSELG
Trigger: TCCCAGCTCTGAGGGGGCCCATTCTGGCAGCGGCGC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGAGGTGGGCAGCAGTCTaGGGAGGCTGGAATGCCGGC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQRWAAV*GGWNAG
Trigger: GCCGGCATTCCAGCCTCCCCAGACTGCTGCCCACCT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAAGGTGGGCAGCAGTCTaGGGAGGCTGGAATGCCGGC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPRWAAV*GGWNAG
Trigger: GCCGGCATTCCAGCCTCCCCAGACTGCTGCCCACCT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGAGATGGCCTCACCTTaGAAGGCTGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGREMASP*KAGGAP
Trigger: GGGGGCTCCCCCAGCCTTCCAAGGTGAGGCCATCTC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGAGATGGCCTCACCTTaGAAGGCTGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQEMASP*KAGGAP
Trigger: GGGGGCTCCCCCAGCCTTCCAAGGTGAGGCCATCTC...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGAGATGGCCTCACCTTaGAAGGCTGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAEMASP*KAGGAP
Trigger: GGGGGCTCCCCCAGCCTTCCAAGGTGAGGCCATCTC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGAGATGGCCTCACCTTaGAAGGCTGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPEMASP*KAGGAP
Trigger: GGGGGCTCCCCCAGCCTTCCAAGGTGAGGCCATCTC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCTGGAGACCCTTGGATaGCTGAGAACCAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRLETLG*LRTNPK
Trigger: TTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCACCCTGCTTTGGCCTaGATGAACATCGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRHPALA*MNIVAS
Trigger: TGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCACCCTGCTTTGGCCTaGATGAACATCGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPHPALA*MNIVAS
Trigger: TGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACGACTGGCCTTGGGCTaGGAGCAGGGAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPRLALG*EQGGCR
Trigger: CCTGCAGCCTCCCTGCTCCCAGCCCAAGGCCAGTCG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCTGGGGGACTCAGTATaGTCCCGGGAAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRLGDSV*SREKSW
Trigger: CCAACTCTTTTCCCGGGACCATACTGAGTCCCCCAG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTCCAACCCCCAGAGGTaGGGCCTAGCCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDSNPQR*GLASEE
Trigger: CTCTTCAGAGGCTAGGCCCCACCTCTGGGGGTTGGA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGAGGCACAAAGCGTGTaGCAGAGGGGGCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPEAQSV*QRGLLP
Trigger: GGGCAGGAGCCCCCTCTGCCACACGCTTTGTGCCTC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCATCTGGGTTTGGTTTaGCTGGGCTGGGGCTTATTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRHLGLV*LGWGLF
Trigger: GAATAAGCCCCAGCCCAGCCAAACCAAACCCAGATG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGCAGCCAGTCCCGGCTTaGCTTTGGATTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRQPVPA*LWIGFV
Trigger: GACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTG...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGGACCCTCAACACTGTaGGCCAGGGCCCTCGTGACC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRGPSTL*ARALVT
Trigger: GGTCACGAGGGCCCTGGCCCACAGTGTTGAGGGTCC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCCAGAAGGTGGTTCCTaGGGACACTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRPEGGS*GHCSSG
Trigger: TCCTGAGGAACAGTGTCCCCAGGAACCACCTTCTGG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGAGGAGAAGCCACGTCTaGCCGCTAGGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWRRSHV*PLGSRR
Trigger: CCTTCTGGAGCCTAGCGGCCAGACGTGGCTTCTCCT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTGCGCTTGTGGCAATTaGGAAGGGTGTGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRCACGN*EGCVSE
Trigger: CTCACTGACACACCCTTCCCAATTGCCACAAGCGCA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCATACCCCTGCGCTTGTaGCAATTGGGAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPIPLRL*QLGRVC
Trigger: ACACACCCTTCCCAATTGCCACAAGCGCAGGGGTAT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
3UTR CAA 72 bp GTCCGCAGCCAGTCCCGGCTTGGCTTTGGATTGGTTTaGTCCACTGCCCCCTCCGTGGCATGGCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: VRSQSRLGFGLV*STAPSVAWPQC
Trigger: ACACTGTGGCCATGCCACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGAGGAGCAGGGCCTCCTaGCTGCCGGCACCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLRSRAS*LPAPSL
Trigger: AAGACTCGGTGCCGGCAGTCAGGAGGCCCTGCTCCT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAGAGGTGCGCCTGCGTaGTCCAGCAGAGGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRARGAPA*SSRGPS
Trigger: AGACGGACCTCTGCTGGATCACGCAGGCGCACCTCT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACCGGGGTCGGGGGCTTaGTGCCATGGTTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPPGSGA*CHGCHC
Trigger: GCAGTGACAACCATGGCATCAAGCCCCCGACCCCGG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCCCGCAGCAGGGAGCTaGTGTTGTAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAPAAGS*CCRWAG
Trigger: GCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATCAGCGAGCGGCAGCTaGTCCTGCGGATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPSASGS*SCGWSA
Trigger: TGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACACAGGAATAATGACTaGCACACCCAGAAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPHRNND*HTQKCQ
Trigger: TTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCTGCTTTGGCCTGGATaGACATCGTGGCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRLLWPG*TSWLQY
Trigger: GTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAAAAGGTTGGCTGGTCTaGGGCCCTGACCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRKGWLV*GPDQGG
Trigger: CCCGCCTTGGTCAGGGCCTCAGACCAGCCAACCTTT...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCATAGATGCGGGATCTaGGCACACACACATGCACTC +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRHRCGI*AHTHAL
Trigger: GAGTGCATGTGTGTGTGCTCAGATCCCGCATCTATG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATCAGGGCATGGCACCTaGGCAGCAGCTGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPSGHGT*AAAAAP
Trigger: AGGTGCGGCAGCTGCTGCTCAGGTGCCATGCCCTGA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCGTCCGATTCCTGCCTaGGCCTGGACTGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADRPIPA*AWTGRA
Trigger: TGCCCGGCCAGTCCAGGCTCAGGCAGGAATCGGACG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTATGGGAATGCACTGTaGCCTGTTTGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRYGNAL*PVCIVP
Trigger: GGGGACAATGCAAACAGGTCACAGTGCATTCCCATA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACTTCCCACATCCCCTaGATTCTTCGTGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTSHIP*ILREGD
Trigger: ATCCCCTTCACGAAGAATTCAGGGGATGTGGGAAGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTGGCTTCAGCTGCCCTaGAGGGGCCGCCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQWLQLP*RGRRIA
Trigger: AGCAATTCGGCGGCCCCTGCAGGGCAGCTGAAGCCA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACTCTGCAGTCGCTGCTaGAGCCGCCTGGCCCTGATC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPLCSRC*SRLALI
Trigger: GATCAGGGCCAGGCGGCTGCAGCAGCGACTGCAGAG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATTGGCGCAGCGCCTCTaGAGTCGCTGCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKELAQRL*SRCCSR
Trigger: GCGGCTGCAGCAGCGACTGCAGAGGCGCTGCGCCAA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR GCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGCATGCGTGACAGCTaGGTCTTCAGGTCATCAATC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPCMRDS*VFRSSI
Trigger: GATTGATGACCTGAAGACGCAGCTGTCACGCATGCA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACAGTGTCGATGACCTaGTTGAGCTGCTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTVSMT*LSCLIS
Trigger: GGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCGGCTGACTCCCCAGTaGCATCCTCCTTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRARLTPQ*HPPWPC
Trigger: GCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACGGCTGACTCCCCAGTaGCATCCTCCTTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRRLTPQ*HPPWPC
Trigger: GCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTGTGTCATCGGCTGCTaGAAAGCCACTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWCVIGC*KATVCP
Trigger: GGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGAGGCCGAAGGAGCTGTaGAGCGAGGTCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQRPKEL*SEVSSV
Trigger: CACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAAGGCCGAAGGAGCTGTaGAGCGAGGTCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRRPKEL*SEVSSV
Trigger: CACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCT...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGCACACCAGCCTCCATaGCACACAGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSAHQPP*HTAASH
Trigger: ATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAAGTGCAAGGCCACAGTaGAGCAGCCCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPSARPQ*SSPAAG
Trigger: CCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACT...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATATCCTGCGGATGGAGTaGAAGGCCACAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDILRME*KATVQQ
Trigger: CTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGAT...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCTGGGTCAGTGATCTaGACTTCAGGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWPGSVI*TSGHGC
Trigger: GCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTCCTGCGATTCATCCTaGCAGAATACCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSSCDSS*QNTPPS
Trigger: GGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCCCCTCCCAGTGCATaGAGGTGCCCCGCCTCACGT +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPPPSA*RCPASR
Trigger: ACGTGAGGCGGGGCACCTGCATGCACTGGGAGGGGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGATTGGTTTTGTCCACTaGCCCCTCCGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWIGFVH*PLRGMA
Trigger: GGCCATGCCACGGAGGGGGCAGTGGACAAAACCAAT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACACCTGAGCAGCAGCTaGCGCACCTCCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEHLSSS*RTSTAW
Trigger: CCAGGCGGTGGAGGTGCGGCAGCTGCTGCTCAGGTG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGCCGCTGCCCGGCATaGCTTCTCTTCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGRCPA*LLFSPF
Trigger: GAAGGGTGAGAAGAGAAGCCATGCCGGGCAGCGGCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATACGTCATCCTCTCGCTaGGGCCGCTGCCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADTSSSR*GRCPAW
Trigger: CCATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTCCGTCTACTTCCTaGCAGGGACATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDGPSTS*QGHGHE
Trigger: CTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTCTGTGTCCCGGTCCTaGAGCCGGTCCTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSVSRS*SRSCVS
Trigger: GGACACACAGGACCGGCTCCAGGACCGGGACACAGA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATCTGTGTCCCGGTCCTaGAGCCGGTCCTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSVSRS*SRSCVS
Trigger: GGACACACAGGACCGGCTCCAGGACCGGGACACAGA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTCTGTGTCCCGGTCCTaGAGCCGGTCCTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRASVSRS*SRSCVS
Trigger: GGACACACAGGACCGGCTCCAGGACCGGGACACAGA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCTCCTGCATGCAGCTaGCCTGCACACCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPAPACS*PAHQPP
Trigger: TGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCGAAGTCTGTCTGGATaGCACGCTCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDRSLSG*HAPACS
Trigger: GCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGCACGAAGTCTGTCTaGATGGCACGCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSCTKSV*MARSCM
Trigger: CATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCCGACTGGCCAGGGTTaGGGTTGGCACCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADPTGQG*GWHQAA
Trigger: AGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAACCACGCTCACCGACTaGCCAGGGTTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPTTLTD*PGLGLA
Trigger: TGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTGGT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGACCACGCTCACCGACTaGCCAGGGTTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQTTLTD*PGLGLA
Trigger: TGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTGGT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTCTCCATCGAAGCTTTaGGATGCCTTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPSPSKL*DAFLQP
Trigger: GGGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCTTCCTGAGCAGGGCTaGCCCTGTCTGAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDLPEQG*PCLKSQ
Trigger: TTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACAGGGCAGGGGCCTATaGGCAACTCAAGCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPQGRGL*ATQARL
Trigger: AAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACGACTGGCCTTGGGCTaGGAGCAGGGAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKERLALG*EQGGCR
Trigger: CCTGCAGCCTCCCTGCTCCCAGCCCAAGGCCAGTCG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGTGCCCCGCCTCACGTaGAGGGCACCGAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEVPRLT*RAPSRR
Trigger: CCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCAC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCATCTGGGTTTGGTTTaGCTGGGCTGGGGCTTATTC +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRHLGLV*LGWGLF
Trigger: GAATAAGCCCCAGCCCAGCCAAACCAAACCCAGATG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTCAGGCATCTGGGTTTaGTTTGGCTGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDSGIWV*FGWAGA
Trigger: AGCCCCAGCCCAGCCAAACCAAACCCAGATGCCTGA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCAGGCCTCAGGCATCTaGGTTTGGTTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWQASGI*VWFGWA
Trigger: AGCCCAGCCAAACCAAACCCAGATGCCTGAGGCCTG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGGGCTTGGCTTTGGATTaGTTTTGTCCACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRGLALD*FCPLPP
Trigger: AGGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCC...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGACCCTCAACACTGTaGGCCAGGGCCCTCGTGACC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGPSTL*ARALVT
Trigger: GGTCACGAGGGCCCTGGCCCACAGTGTTGAGGGTCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTGCCTGAGCCTGGACTaGCCGGGCAGTAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRACLSLD*PGSSAT
Trigger: AGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGGGGATGGCCTAATATaGGAATGCACTGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPGDGLI*ECTVTC
Trigger: ACAGGTCACAGTGCATTCCCATATTAGGCCATCCCC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACGGTATCCCGGGGGCTaGGGAGAGAGGGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDARYPGG*GERAGW
Trigger: CCAACCCGCCCTCTCTCCTCAGCCCCCGGGATACCG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCGGGGTCGGGGGCTTaGTGCCATGGTTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPGSGA*CHGCHC
Trigger: GCAGTGACAACCATGGCATCAAGCCCCCGACCCCGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGGGCACCTGTCCCCTaGCTCAGGGTCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEWAPVP*LRVCPT
Trigger: TGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCCCGCAGCAGGGAGCTaGTGTTGTAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLPAAGS*CCRWAG
Trigger: GCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLRAGPV*RAKGTE
Trigger: CTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPERAGPV*RAKGTE
Trigger: CTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCT...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCACAGGAATAATGACTaGCACACCCAGAAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPHRNND*HTQKCQ
Trigger: TTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGAAGGGCAGAGCCCATaGGTTAGGCAATGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDEGQSP*VRQWLL
Trigger: CAACAGCCATTGCCTAACTCATGGGCTCTGCCCTTC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGAAGGGCAGAGCCCATaGGTTAGGCAATGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWEGQSP*VRQWLL
Trigger: CAACAGCCATTGCCTAACTCATGGGCTCTGCCCTTC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGAAAGGTTGGCTGGTCTaGGGCCCTGACCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEKGWLV*GPDQGG
Trigger: CCCGCCTTGGTCAGGGCCTCAGACCAGCCAACCTTT...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGGCTTCAGCTGCCCTaGAGGGGCCGCCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEWLQLP*RGRRIA
Trigger: AGCAATTCGGCGGCCCCTGCAGGGCAGCTGAAGCCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATCTACGAGCCAGGCCTaGTTCTTCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSTSQA*FFPRTL
Trigger: CAGGGTCCTGGGGAAGAAGCAGGCCTGGCTCGTAGA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGGGACTGCTGTCACTaGCCTTGTAGGAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSWDCCH*PCRSQN
Trigger: ATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCCTTGGCGTGGGACTaGTGTCACTGCCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPALAWD*CHCPCR
Trigger: CCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGCCTTGGCGTGGGACTaGTGTCACTGCCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAALAWD*CHCPCR
Trigger: CCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCTTTCAGGTGCCGGATaGACACCTCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDLSGAG*TPPSAA
Trigger: TGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGAGCCGGGCTTTCAGGTaGCGGATGCACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSRAFR*RMHTSF
Trigger: GAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAGCCGGGCTTTCAGGTaGCGGATGCACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRASRAFR*RMHTSF
Trigger: GAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCCACGAAGTACTTCTaGAGCCCCTTGTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSTKYF*SPLSLS
Trigger: TGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGCCACCTCCATGCTGTaGAGCAGCGTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAATSML*SSVSSF
Trigger: GAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCAGTGTGTCATCGGCTaGTGCAAAGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWQCVIG*CKATVC
Trigger: GCAGACAGTGGCTTTGCAGCAGCCGATGACACACTG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGCTTCTCATAGGTGTTaGTGGCAGGGAAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAASHRC*WQGSGG
Trigger: GCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGGCACGCTCCTGCATaGAGCTGGCCTGCACACCAG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEWHAPA*SWPAHQ
Trigger: CTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGAGCTGGTGTACCTCCTaGCTTGGGTCCCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSWCTS*LGSPFP
Trigger: AGGGAAGGGGGACCCAAGGCAGGAGGTACACCAGCT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGCCTCCTCTTCTTGTaGTGGTGGATTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSCLLFL*WWILQL
Trigger: CAGCTGGAGAATCCACCAGCACAAGAAGAGGAGGCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGCCCCCTTGGGTTTCTaGCCCTGCCTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQAPLGF*PCLLFL
Trigger: CAAGAAGAGGAGGCAGGGGCAGAAACCCAAGGGGGC...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCCCCCTTGGGTTTCTaGCCCTGCCTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPAPLGF*PCLLFL
Trigger: CAAGAAGAGGAGGCAGGGGCAGAAACCCAAGGGGGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGCCCCATGTGTACCCTaGCTCTTCAGGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAAPCVP*LFRAWH
Trigger: GTGCCATGCCCTGAAGAGGCAGGGTACACATGGGGC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCAGCGTCCGATTCCTaGCTGAGCCTGGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPASDS*LSLDWP
Trigger: CGGCCAGTCCAGGCTCAGGCAGGAATCGGACGCTGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGGCTGTAAGATACCCCTaGGCTTGTGGCAATTGGGAA +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRAVRYP*ACGNWE
Trigger: TTCCCAATTGCCACAAGCGCAGGGGTATCTTACAGC...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGCCGCTGCCCGGCATaGCTTCTCTTCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGRCPA*LLFSPF
Trigger: GAAGGGTGAGAAGAGAAGCCATGCCGGGCAGCGGCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATGGAGCGCCTTGGCGTaGGACTGCTGTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPWSALA*DCCHCP
Trigger: AGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTTTCATGGAGCGCCTTaGCGTGGGACTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDFHGAP*RGTAVT
Trigger: AGTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTCTGTGTCCCGGTCCTaGAGCCGGTCCTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPESVSRS*SRSCVS
Trigger: GGACACACAGGACCGGCTCCAGGACCGGGACACAGA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACCGGGTCACTCAGCTTaGTGTAGGTGGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPPGHSA*CRWSCG
Trigger: CCCGCAGCTCCACCTACACCAAGCTGAGTGACCCGG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGAGGGATCACCCGGCTaGCGGTCACCACAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEEGSPG*RSPQTA
Trigger: GGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTGCACGAAGTCTGTCTaGATGGCACGCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWCTKSV*MARSCM
Trigger: CATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCCACCACTGCTGAGTTaGGGTCTCTGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQPPLLS*GLWALK
Trigger: CTTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGG...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACCACCACTGCTGAGTTaGGGTCTCTGGGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPPPLLS*GLWALK
Trigger: CTTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACCTCCTCCTCTTCCATaGGGCACACCACGCTCACCG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPPPPLP*GTPRSP
Trigger: CGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGGCTCCAGTAGCTCTTaGGCTCCTTCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQGSSSS*APSQPR
Trigger: CCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCC...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGCTCCAGTAGCTCTTaGGCTCCTTCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGSSSS*APSQPR
Trigger: CCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGCGGGCAAGGTGGCTTaGAAGAGACGGCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRAGKVA*KRRHGV
Trigger: CACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCTCTTCTTGTGCTGGTaGATTCTCCAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLFLCW*ILQLGA
Trigger: AGCTCCCAGCTGGAGAATCCACCAGCACAAGAAGAG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTCACCTTGGAAGGCTaGGGGAGCCCCCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALTLEG*GSPLGF
Trigger: AAACCCAAGGGGGCTCCCCCAGCCTTCCAAGGTGAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACTCGGGGCAAGTTTCTaGGGGCAGTCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLGASF*GQSWPL
Trigger: CAGAGGCCATGACTGCCCCCAGAAACTTGCCCCGAG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTCGGGGCAAGTTTCTaGGGGCAGTCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALGASF*GQSWPL
Trigger: CAGAGGCCATGACTGCCCCCAGAAACTTGCCCCGAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTCCCGGGAAAAGAGTTaGGGCAGTGAACTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDSREKS*GSELPR
Trigger: CCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACGCGGCACAGGAGGCTaGGTCCGCAGCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQRGTGG*VRSQSR
Trigger: CCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCGTGACCCACACCGGTaGTCTCAGGCCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRARDPHR*SQARTG
Trigger: TCCTGTTCTGGCCTGAGACCACCGGTGTGGGTCACG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACGTGACCCACACCGGTaGTCTCAGGCCAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRRDPHR*SQARTG
Trigger: TCCTGTTCTGGCCTGAGACCACCGGTGTGGGTCACG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTCTTCCCCAGGACCCTaGTACTCAGACCCACACACC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRASSPGP*YSDPHT
Trigger: GGTGTGTGGGTCTGAGTATCAGGGTCCTGGGGAAGA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATGGGCACCTGTCCCCTaGCTCAGGGTCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEWAPVP*LRVCPT
Trigger: TGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGGGTGGGTCCACGGGTaGTGGGCTCTGGGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAGWVHG*WALGPL
Trigger: TAGAGGCCCCAGAGCCCATCACCCGTGGACCCACCC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATCAGCGAGCGGCAGCTaGTCCTGCGGATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKESASGS*SCGWSA
Trigger: TGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGATGGCTGCCTCCATTTaGGGAGAGAGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQMAASI*GESTGP
Trigger: TGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCAT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTATGGCTGCCTCCATTTaGGGAGAGAGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAMAASI*GESTGP
Trigger: TGGGCCAGTGCTCTCTCCTCAAATGGAGGCAGCCAT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGCCTGTGGCCTTGACTaGGCTCCTGAGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEACGLD*APESQG
Trigger: ACCTTGGGACTCAGGAGCTCAGTCAAGGCCACAGGC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCTGCTTTGGCCTGGATaGACATCGTGGCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWLLWPG*TSWLQY
Trigger: GTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGTTGGAGCATTGGGGTaGGGGCAAGCAACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRVGALG*GQATLA
Trigger: TGCCAAGGTTGCTTGCCCTCACCCCAATGCTCCAAC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTTCTCGGCAAAGCTTTaGCTATGTCTGAGGAGACTA +
Preference number: 4 (lower is better)
Translates to: GIPTISGQAAGAAARMGPFSAKL*LCLRRL
Trigger: TAGTCTCCTCAGACATAGTCAAAGCTTTGCCGAGAA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGGCCTGTCCCAGGGCTaGGTGGGGAGCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQGLSQG*VGSCSL
Trigger: GAGGGAGCAGCTCCCCACTCAGCCCTGGGACAGGCC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTCACAGGTGGAGAGGTaGGCCTGCGTGATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLSQVER*ACVIQQ
Trigger: CTGCTGGATCACGCAGGCGCACCTCTCCACCTGTGA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTGCCATGGTTGTCACTaGACAGCGTGTATTTCATGG +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRCHGCH*TACISW
Trigger: CCATGAAATACACGCTGTGCAGTGACAACCATGGCA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATATGACCTGCTTGAGCTaGTTGATCTCCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDMTCLS*LISFRA
Trigger: GGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCAT...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACCGACGACAGCAGGCTaGTGGCTTCCAGCGCGTCCG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAPTTAG*WLPARP
Trigger: CGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGCGAGGTCTCCTCGGTaGCACAGTCCACCCCCGACG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQARSPR*HSPPPT
Trigger: CGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATAGGCCGAAGGAGCTGTaGAGCGAGGTCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADRPKEL*SEVSSV
Trigger: CACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGGCACGCTCCTGCATaGAGCTGGCCTGCACACCAG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADWHAPA*SWPAHQ
Trigger: CTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGGATGGCACGCTCCTaGATGCAGCTGGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEWMARS*MQLACT
Trigger: TGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTGGATGGCACGCTCCTaGATGCAGCTGGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLWMARS*MQLACT
Trigger: TGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAATCCTGCGGATGGAGTaGAAGGCCACAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRILRME*KATVQQ
Trigger: CTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGAT...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGACTTCAGGCCATGGCTaGCTCCATTTGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWTSGHG*LHLRRE
Trigger: CTCTCTCCTCAAATGGAGGCAGCCATGGCCTGAAGT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATACACAGAACCCACACTaGCCTCCGCCACCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADTQNPH*PPPPCA
Trigger: GGCGCAAGGTGGCGGAGGGCAGTGTGGGTTCTGTGT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTATTGGTTTTGTCCACTaGCCCCTCCGTGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAIGFVH*PLRGMA
Trigger: GGCCATGCCACGGAGGGGGCAGTGGACAAAACCAAT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGAGTAGACGGCCGCTaGTGGCTACACTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGVDGR*WLHSPP
Trigger: AGGAGGTGAGTGTAGCCAGCAGCGGCCGTCTACTCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTGAGCACACACACATaGACTCCAGAGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALSTHT*TPELGQ
Trigger: CTGGCCCAGCTCTGGAGTGCATGTGTGTGTGCTCAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCCCCATGTGTACCCTaGCTCTTCAGGGCATGGCAC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPAPCVP*LFRAWH
Trigger: GTGCCATGCCCTGAAGAGGCAGGGTACACATGGGGC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGGAGCGCCTTGGCGTaGGACTGCTGTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADWSALA*DCCHCP
Trigger: AGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGGGGGCTTGATGCCATaGTTGTCACTGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPGGLMP*LSLHSV
Trigger: CACGCTGTGCAGTGACAACCATGGCATCAAGCCCCC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGGGGCTTGATGCCATaGTTGTCACTGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGGLMP*LSLHSV
Trigger: CACGCTGTGCAGTGACAACCATGGCATCAAGCCCCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATTGGCCATGCCATTCTaGGCCACCTCCATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLAMPF*ATSMLC
Trigger: GCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCAGTGCCATCCTCCTTaGCCATGCCATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQQCHPP*PCHSGP
Trigger: TGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTG...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGCTCCTGCATGCAGCTaGCCTGCACACCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADAPACS*PAHQPP
Trigger: TGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACCACAGACCTGGGCCTaGGTCACTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPPQTWA*VTFSRM
Trigger: CATCCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTCTGTCCCACAGACCTaGGCCTGGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSVPQT*AWVTFS
Trigger: GGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCCGACTGGCCAGGGTTaGGGTTGGCACCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQPTGQG*GWHQAA
Trigger: AGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATACCACGCTCACCGACTaGCCAGGGTTGGGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADTTLTD*PGLGLA
Trigger: TGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTGGT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAAAAGCCAGGCCACCGTaGGCACGGCCGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAKARPP*ARPAPP
Trigger: TGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTTGGAAGAGACGGCATaGAGTGCGCAGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQLEETA*SAQGTG
Trigger: TCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGGGCTGCGGGCAAGGTaGCTTGGAAGAGACGGCATG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADGLRAR*LGRDGM
Trigger: CATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGGTGGATTCTCCAGCTaGGAGCTGGGACTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEGGFSS*ELGLRQ
Trigger: CTGCCTGAGTCCCAGCTCCCAGCTGGAGAATCCACC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCTCCTCTTCTTGTGCTaGTGGATTCTCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDLLFLC*WILQLG
Trigger: TCCCAGCTGGAGAATCCACCAGCACAAGAAGAGGAG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCTCACCTTGGAAGGCTaGGGGAGCCCCCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPELTLEG*GSPLGF
Trigger: AAACCCAAGGGGGCTCCCCCAGCCTTCCAAGGTGAG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTTTTTCAGTAAGCTGTaGGTTCCTGAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRFFSKL*VPESSP
Trigger: AGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGTGCAAAGCAGAAGTTaGGCCCGAGGGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLVQSRS*ARGPQR
Trigger: TCTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCAC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATCCAACCCCCAGAGGTaGGGCCTAGCCTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPSNPQR*GLASEE
Trigger: CTCTTCAGAGGCTAGGCCCCACCTCTGGGGGTTGGA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTGGGTTTGGTTTGGCTaGGCTGGGGCTTATTCCACA +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWWVWFG*AGAYST
Trigger: TGTGGAATAAGCCCCAGCCCAGCCAAACCAAACCCA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCATCTGGGTTTGGTTTaGCTGGGCTGGGGCTTATTC +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWHLGLV*LGWGLF
Trigger: GAATAAGCCCCAGCCCAGCCAAACCAAACCCAGATG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGCCCCCTCCGTGGCATaGCCACAGTGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQAPSVA*PQCPAG
Trigger: CCCCGCAGGACACTGTGGCCATGCCACGGAGGGGGC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACGCGGCACAGGAGGCTaGGTCCGCAGCCAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCARGTGG*VRSQSR
Trigger: CCGGGACTGGCTGCGGACCCAGCCTCCTGTGCCGCG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTCCTCTCAACAACCCTaGGTCCACTGGCCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADSSQQP*VHWPSA
Trigger: TGCGGAGGGCCAGTGGACTCAGGGTTGTTGAGAGGA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS-3UTR TCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCCTCCACCAGTGAATTaGATAGGGCTGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQPPPVN*IGLVHR
Trigger: CCTGTGCACCAGCCCTATTCAATTCACTGGTGGAGG...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTCTTGTTCTGGATGTTaGTGTCCACGAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRSCSGC*CPRSTS
Trigger: AGAAGTACTTCGTGGACATCAACATCCAGAACAAGA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCCCGCAGCAGGGAGCTaGTGTTGTAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGPAAGS*CCRWAG
Trigger: GCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTCAGCGAGCGGCAGCTaGTCCTGCGGATGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGSASGS*SCGWSA
Trigger: TGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCAGCCAGAGACTTCCTaGGCAGGGCTGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGQPETS*AGLALS
Trigger: AGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCCGGCTTCCCCACATaGAGACAGCCAGAGACTTCC +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPGFPT*RQPETS
Trigger: GGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGCCTGTGGCCTTGACTaGGCTCCTGAGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADACGLD*APESQG
Trigger: ACCTTGGGACTCAGGAGCTCAGTCAAGGCCACAGGC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGAAAGAGTTGGGGCAGTaGACTTCCCAGGCCGACTGG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEKELGQ*TSQADW
Trigger: CCAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTT...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGAAGGGCAGAGCCCATaGGTTAGGCAATGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAEGQSP*VRQWLL
Trigger: CAACAGCCATTGCCTAACTCATGGGCTCTGCCCTTC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGACTACGCAGCTCCGTaGGTGCGCGGCACAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQDYAAP*VRGTGG
Trigger: GCCTCCTGTGCCGCGCACTCACGGAGCTGCGTAGTC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGGCCTGTCCCAGGGCTaGGTGGGGAGCTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAGLSQG*VGSCSL
Trigger: GAGGGAGCAGCTCCCCACTCAGCCCTGGGACAGGCC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGGTCACTGTGGAGGGTaGGCTCTCTCAGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAGHCGG*ALSGGG
Trigger: GCCTCCCCCTGAGAGAGCTCACCCTCCACAGTGACC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCCCCTGAATTCTTCGTaGAGGGGATGGCCTAATATG +
Preference number: 4 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWPLNSS*RGWPNM
Trigger: CATATTAGGCCATCCCCTTCACGAAGAATTCAGGGG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAAGCCGGGCTTTCAGGTaGCGGATGCACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKESRAFR*RMHTSF
Trigger: GAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCT...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATCAATCCAGTCCTCCTaGATGCGTGACAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSIQSS*MRDSCV
Trigger: GACGCAGCTGTCACGCATGCAGGAGGACTGGATTGA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATCTGGGCCACCTCCATaGTGTGCAGCAGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKESGPPP*CAAASP
Trigger: TGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTCTGGGCCACCTCCATaGTGTGCAGCAGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADSGPPP*CAAASP
Trigger: TGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATGTGTCATCGGCTGCTaGAAAGCCACTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPCVIGC*KATVCP
Trigger: GGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGTGTCATCGGCTGCTaGAAAGCCACTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPECVIGC*KATVCP
Trigger: GGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTGGCACGCTCCTGCATaGAGCTGGCCTGCACACCAG +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGWHAPA*SWPAHQ
Trigger: CTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGGATGGCACGCTCCTaGATGCAGCTGGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADWMARS*MQLACT
Trigger: TGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGATCCTGCGGATGGAGTaGAAGGCCACAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLILRME*KATVQQ
Trigger: CTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGAT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAATCCTGCGGATGGAGTaGAAGGCCACAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPILRME*KATVQQ
Trigger: CTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGAT...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACCTTTCTCCAACCCCTaGTCCTTCCACGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPPFSNP*SFHGTV
Trigger: AACAGTCCCGTGGAAGGAGCAGGGGTTGGAGAAAGG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCCTTTCTCCAACCCCTaGTCCTTCCACGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAPFSNP*SFHGTV
Trigger: AACAGTCCCGTGGAAGGAGCAGGGGTTGGAGAAAGG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGCTCCCTCCCCTCCCTaGAATTTGTCCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPAPSPP*NLSSWC
Trigger: ACACCAGCTGGACAAATTGCAGGGAGGGGAGGGAGC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCCTGGGTCAGTGATCTaGACTTCAGGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLPGSVI*TSGHGC
Trigger: GCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTGCCCTCCGCCACCTTaGGCCCAGCCCCGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMCPPPP*AQPRLS
Trigger: GGAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGCCCCCTTGGGTTTCTaGCCCTGCCTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEAPLGF*PCLLFL
Trigger: CAAGAAGAGGAGGCAGGGGCAGAAACCCAAGGGGGC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATCCTGCGATTCATCCTaGCAGAATACCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPSCDSS*QNTPPS
Trigger: GGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGCTCTGCCACGCCCCTaGCTAGGAAACCTATCCCAG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADALPRP*LGNLSQ
Trigger: CTGGGATAGGTTTCCTAGGCAGGGGCGTGGCAGAGC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTGGGAGCAGGGAGGCTaGAGGGCGCCTACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQWEQGG*RAPTCS
Trigger: AGAGCAGGTAGGCGCCCTGCAGCCTCCCTGCTCCCA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGGAGTAGACGGCCGCTaGTGGCTACACTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADGVDGR*WLHSPP
Trigger: AGGAGGTGAGTGTAGCCAGCAGCGGCCGTCTACTCC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGGAGTAGACGGCCGCTaGTGGCTACACTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEGVDGR*WLHSPP
Trigger: AGGAGGTGAGTGTAGCCAGCAGCGGCCGTCTACTCC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATTGGCCCCAGAACCTTaGAGTTTGTCCCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPLAPEP*SLSHPS
Trigger: GGAGGGGTGGGACAAACTGCAAGGTTCTGGGGCCAA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATTCCCAGTTGGCCCGTaGTTCGGGGCTTCCCGTATT +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPFPVGP*FGASRI
Trigger: AATACGGGAAGCCCCGAACCACGGGCCAACTGGGAA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGTCCGTCTACTTCCTaGCAGGGACATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPGPSTS*QGHGHE
Trigger: CTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATTTCATGGAGCGCCTTaGCGTGGGACTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPFHGAP*RGTAVT
Trigger: AGTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTTTCATGGAGCGCCTTaGCGTGGGACTGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAFHGAP*RGTAVT
Trigger: AGTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAACAGCGTGTATTTCATaGAGCGCCTTGGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRTACIS*SALAWD
Trigger: GTCCCACGCCAAGGCGCTCCATGAAATACACGCTGT...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAACGACAGCAGGCTGCTaGCTTCCAGCGCGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDATTAGC*LPARPS
Trigger: GGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCGAAGTCTGTCTGGATaGCACGCTCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLRSLSG*HAPACS
Trigger: GCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGGCCAGGGTTGGGGTTaGCACCAGGCCGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMGQGWG*HQAAVG
Trigger: CCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAAAGCCAGGCCACCGTaGGCACGGCCGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQKARPP*ARPAPP
Trigger: TGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTT...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTTGGAAGAGACGGCATaGAGTGCGCAGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLLEETA*SAQGTG
Trigger: TCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTTGGAAGAGACGGCATaGAGTGCGCAGGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPELEETA*SAQGTG
Trigger: TCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACTGCACTTCAGGCCATaGCTGCCTCCATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLHFRP*LPPFEE
Trigger: CTCCTCAAATGGAGGCAGCCATGGCCTGAAGTGCAG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTGCACTTCAGGCCATaGCTGCCTCCATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALHFRP*LPPFEE
Trigger: CTCCTCAAATGGAGGCAGCCATGGCCTGAAGTGCAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGCAGTCTGGGGAGGCTaGAATGCCGGCCGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQAVWGG*NAGRPS
Trigger: ACTGGGCCGGCCGGCATTCCAGCCTCCCCAGACTGC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGAGGTGGGCAGCAGTCTaGGGAGGCTGGAATGCCGGC +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQRWAAV*GGWNAG
Trigger: GCCGGCATTCCAGCCTCCCCAGACTGCTGCCCACCT...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGGTGGATTCTCCAGCTaGGAGCTGGGACTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADGGFSS*ELGLRQ
Trigger: CTGCCTGAGTCCCAGCTCCCAGCTGGAGAATCCACC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATCCCGGGAAAAGAGTTaGGGCAGTGAACTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSREKS*GSELPR
Trigger: CCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGTCAGCAGCGTGGCTaGGGGACTCAGTATGGTCCC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADCQQRG*GTQYGP
Trigger: GGGACCATACTGAGTCCCCCAGCCACGCTGCTGACA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGAGGGCAAGCAACCTTaGCAGATAACCAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAEGKQP*QITRVA
Trigger: GGCCACTCTGGTTATCTGCCAAGGTTGCTTGCCCTC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGGACCCTCAACACTGTaGGCCAGGGCCCTCGTGACC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAGPSTL*ARALVT
Trigger: GGTCACGAGGGCCCTGGCCCACAGTGTTGAGGGTCC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACGCACCTCCACCGCCTaGAGCCTCACAGGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQRTSTA*SLTGSL
Trigger: CAGGCTGCCTGTGAGGCTCCAGGCGGTGGAGGTGCG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATAGGAGAAGCCACGTCTaGCCGCTAGGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADRRSHV*PLGSRR
Trigger: CCTTCTGGAGCCTAGCGGCCAGACGTGGCTTCTCCT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGGATGGCCTAATATaGGAATGCACTGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDGDGLI*ECTVTC
Trigger: ACAGGTCACAGTGCATTCCCATATTAGGCCATCCCC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGGGTGGGTCCACGGGTaGTGGGCTCTGGGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMGWVHG*WALGPL
Trigger: TAGAGGCCCCAGAGCCCATCACCCGTGGACCCACCC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGGGTGGGTCCACGGGTaGTGGGCTCTGGGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAGWVHG*WALGPL
Trigger: TAGAGGCCCCAGAGCCCATCACCCGTGGACCCACCC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCTCCCAGCCTGCAGATaGGATGGCCTCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADLPACR*DGLTLE
Trigger: TTCCAAGGTGAGGCCATCTCATCTGCAGGCTGGGAG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAGCTTTGACTATGTCTaGGGAGACTACGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRASFDYV*GDYAAP
Trigger: CGGAGCTGCGTAGTCTCCTCAGACATAGTCAAAGCT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTAGGAGCAGAGGGGCCTaGAGCTTGACTAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRARSRGA*SLTKFQ
Trigger: CTGGAATTTAGTCAAGCTTCAGGCCCCTCTGCTCCT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGGTCACTGTGGAGGGTaGGCTCTCTCAGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQGHCGG*ALSGGG
Trigger: GCCTCCCCCTGAGAGAGCTCACCCTCCACAGTGACC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGCCTTGGCGTGGGACTaGTGTCACTGCCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGALAWD*CHCPCR
Trigger: CCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTCAATCCAGTCCTCCTaGATGCGTGACAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPESIQSS*MRDSCV
Trigger: GACGCAGCTGTCACGCATGCAGGAGGACTGGATTGA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGATGACCTGCTTGAGCTaGTTGATCTCCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQMTCLS*LISFRA
Trigger: GGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCAT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGCCACCTCCATGCTGTaGAGCAGCGTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGATSML*SSVSSF
Trigger: GAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACATCCTCCTTGGCCATaGCATTCTGGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEHPPWP*HSGPPP
Trigger: TGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGTGTGTCATCGGCTaGTGCAAAGCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEQCVIG*CKATVC
Trigger: GCAGACAGTGGCTTTGCAGCAGCCGATGACACACTG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGCACACCAGCCTCCATaGCACACAGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEAHQPP*HTAASH
Trigger: ATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAAGGTCAGGCTGGTACTaGACGAAGTCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPRSGWY*TKSVWM
Trigger: CATCCAGACAGACTTCGTGCAGTACCAGCCTGACCT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGTGCAAGGCCACAGTaGAGCAGCCCCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQSARPQ*SSPAAG
Trigger: CCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACT...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGGGTCCCCCTTCCCTaGTCTCCATCGAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADWVPLP*SPSKLW
Trigger: CCAAAGCTTCGATGGAGAGCAGGGAAGGGGGACCCA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAACACAGAACCCACACTaGCCTCCGCCACCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDATQNPH*PPPPCA
Trigger: GGCGCAAGGTGGCGGAGGGCAGTGTGGGTTCTGTGT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTCCTGCGATTCATCCTaGCAGAATACCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLSCDSS*QNTPPS
Trigger: GGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGGCAGCCTGCACCTTTaGATAGATGCGGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPGSLHL*IDAGSE
Trigger: CTCAGATCCCGCATCTATGCAAAGGTGCAGGCTGCC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGCAGCCTGCACCTTTaGATAGATGCGGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGSLHL*IDAGSE
Trigger: CTCAGATCCCGCATCTATGCAAAGGTGCAGGCTGCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTTGGCCCCAGAACCTTaGAGTTTGTCCCACCCCTCC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADLAPEP*SLSHPS
Trigger: GGAGGGGTGGGACAAACTGCAAGGTTCTGGGGCCAA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGGTCCGAGTAAGGGGTaGGATGGGCGGTATCCCGGG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQGPSKG*DGRYPG
Trigger: CCCGGGATACCGCCCATCCCACCCCTTACTCGGACC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTTGGCCATGCCATTCTaGGCCACCTCCATGCTGTGC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADLAMPF*ATSMLC
Trigger: GCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCCGGGTCACTCAGCTTaGTGTAGGTGGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQPGHSA*CRWSCG
Trigger: CCCGCAGCTCCACCTACACCAAGCTGAGTGACCCGG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGCTCCTGCATGCAGCTaGCCTGCACACCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQAPACS*PAHQPP
Trigger: TGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATGCAATTTGTCCAGCTaGTGTACCTCCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRCNLSS*CTSCLG
Trigger: CCCAAGGCAGGAGGTACACCAGCTGGACAAATTGCA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACTTCCTGAGCAGGGCTaGCCCTGTCTGAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKELPEQG*PCLKSQ
Trigger: TTGGCTCTTCAGACAGGGCCAGCCCTGCTCAGGAAG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTCTTCTTGTGCTGGTaGATTCTCCAGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALFLCW*ILQLGA
Trigger: AGCTCCCAGCTGGAGAATCCACCAGCACAAGAAGAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTCTCCTCTTCTTGTGCTaGTGGATTCTCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRALLFLC*WILQLG
Trigger: TCCCAGCTGGAGAATCCACCAGCACAAGAAGAGGAG...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACTGGAGACCCTTGGATaGCTGAGAACCAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLETLG*LRTNPK
Trigger: TTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCTCACTGGAGACCCTTaGATGGCTGAGAACCAACCC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPELTGDP*MAENQP
Trigger: GGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGTAATGTCAGCAGCGTaGCTGGGGGACTCAGTATGG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLVMSAA*LGDSVW
Trigger: CCATACTGAGTCCCCCAGCCACGCTGCTGACATTAC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGGCTGTTGGAGCATTaGGGTGAGGGCAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEWLLEH*GEGKQP
Trigger: AGGTTGCTTGCCCTCACCCCAATGCTCCAACAGCCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATTAGGCAATGGCTGTTaGAGCATTGGGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRLGNGC*SIGVRA
Trigger: TGCCCTCACCCCAATGCTCCAACAGCCATTGCCTAA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTCCACAAAGGTTGGCTaGTCTGAGGCCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPESTKVG*SEALTK
Trigger: CTTGGTCAGGGCCTCAGACCAGCCAACCTTTGTGGA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTGGGTTTGGTTTGGCTaGGCTGGGGCTTATTCCACA +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQWVWFG*AGAYST
Trigger: TGTGGAATAAGCCCCAGCCCAGCCAAACCAAACCCA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGAAAAGGGTCACTGTaGAGGGTGAGCTCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGKGSL*RVSSLR
Trigger: CCTGAGAGAGCTCACCCTCCACAGTGACCCTTTTCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCCAGAAGGTGGTTCCTaGGGACACTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLPEGGS*GHCSSG
Trigger: TCCTGAGGAACAGTGTCCCCAGGAACCACCTTCTGG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCCAGAAGGTGGTTCCTaGGGACACTGTTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEPEGGS*GHCSSG
Trigger: TCCTGAGGAACAGTGTCCCCAGGAACCACCTTCTGG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCATGCGCTTGTGGCAATTaGGAAGGGTGTGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPCACGN*EGCVSE
Trigger: CTCACTGACACACCCTTCCCAATTGCCACAAGCGCA...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGGCAGCTGCGGACACTaGGCGAACACTGCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMGSCGH*ANTARP
Trigger: CGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGCC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACCGGGGTCGGGGGCTTaGTGCCATGGTTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAPGSGA*CHGCHC
Trigger: GCAGTGACAACCATGGCATCAAGCCCCCGACCCCGG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCTCCCAGCCTGCAGATaGGATGGCCTCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLPACR*DGLTLE
Trigger: TTCCAAGGTGAGGCCATCTCATCTGCAGGCTGGGAG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGTTGGAGCATTGGGGTaGGGGCAAGCAACCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGVGALG*GQATLA
Trigger: TGCCAAGGTTGCTTGCCCTCACCCCAATGCTCCAAC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGAGGGGCCTGAAGCTTaGCTAAATTCCAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRAEGPEA*LNSSGE
Trigger: TTCACCACTGGAATTTAGTCAAGCTTCAGGCCCCTC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCATAGATGCGGGATCTaGGCACACACACATGCACTC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEHRCGI*AHTHAL
Trigger: GAGTGCATGTGTGTGTGCTCAGATCCCGCATCTATG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACCCCTGAATTCTTCGTaGAGGGGATGGCCTAATATG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRPLNSS*RGWPNM
Trigger: CATATTAGGCCATCCCCTTCACGAAGAATTCAGGGG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTACTTCCCACATCCCCTaGATTCTTCGTGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRATSHIP*ILREGD
Trigger: ATCCCCTTCACGAAGAATTCAGGGGATGTGGGAAGT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACTTTCAGGTGCCGGATaGACACCTCCTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKELSGAG*TPPSAA
Trigger: TGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGATGACCTGCTTGAGCTaGTTGATCTCCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLMTCLS*LISFRA
Trigger: GGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCAT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGATGACCTGCTTGAGCTaGTTGATCTCCTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEMTCLS*LISFRA
Trigger: GGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCAT...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAACAGTGTCGATGACCTaGTTGAGCTGCTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPTVSMT*LSCLIS
Trigger: GGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGT...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATCCACGAAGTACTTCTaGAGCCCCTTGTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRSTKYF*SPLSLS
Trigger: TGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTCCACGAAGTACTTCTaGAGCCCCTTGTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SVRAILRFILPEYPTLLQSTKYF*SPLSLS
Trigger: TGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCATCTGGGCCACCTCCATaGTGTGCAGCAGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDASGPPP*CAAASP
Trigger: TGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGA...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGCTTCTCATAGGTGTTaGTGGCAGGGAAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAASHRC*WQGSGG
Trigger: GCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATGGCACGCTCCTGCATaGAGCTGGCCTGCACACCAG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQWHAPA*SWPAHQ
Trigger: CTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCTTTCTCCAACCCCTaGTCCTTCCACGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPFSNP*SFHGTV
Trigger: AACAGTCCCGTGGAAGGAGCAGGGGTTGGAGAAAGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTGCCTCCTCTTCTTGTaGTGGTGGATTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPECLLFL*WWILQL
Trigger: CAGCTGGAGAATCCACCAGCACAAGAAGAGGAGGCA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGCTCTGCCACGCCCCTaGCTAGGAAACCTATCCCAG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAALPRP*LGNLSQ
Trigger: CTGGGATAGGTTTCCTAGGCAGGGGCGTGGCAGAGC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACTTGCTGTGTTTTCATaGTTTAATTCAGAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLAVFS*FNSELS
Trigger: AGACAACTCTGAATTAAAGCATGAAAACACAGCAAG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381873.7
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAATGGCCATGAGGCTGTaGGTCCGAGTAAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAMAMRL*VRVRGG
Trigger: CCCACCCCTTACTCGGACCCACAGCCTCATGGCCAT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACCGGGTCACTCAGCTTaGTGTAGGTGGAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQPGHSA*CRWSCG
Trigger: CCCGCAGCTCCACCTACACCAAGCTGAGTGACCCGG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGACGACAGCAGGCTGCTaGCTTCCAGCGCGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMTTAGC*LPARPS
Trigger: GGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGT...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTCTCATAGGTGTTGCTaGCAGGGAAGCGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQSHRCC*QGSGGP
Trigger: TGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTCTGTCCCACAGACCTaGGCCTGGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGSVPQT*AWVTFS
Trigger: GGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACCTCCTCCTCTTCCATaGGGCACACCACGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQPPPLP*GTPRSP
Trigger: CGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGGCTCCAGTAGCTCTTaGGCTCCTTCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQGSSSS*APSQPR
Trigger: CCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTCTCCATCGAAGCTTTaGGATGCCTTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRASPSKL*DAFLQP
Trigger: GGGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGCGGGCAAGGTGGCTTaGAAGAGACGGCATGGAGTG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAAGKVA*KRRHGV
Trigger: CACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGATGACGGGAAAGCCTaGGATGAACAGACAGACACA +
Preference number: 4 (lower is better)
Translates to: TQARLPHMKTARDFLSRADDGKA*DEQTDT
Trigger: TGTGTCTGTCTGTTCATCCCAGGCTTTCCCGTCATC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACTCCTCTTCTTGTGCTaGTGGATTCTCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPLLFLC*WILQLG
Trigger: TCCCAGCTGGAGAATCCACCAGCACAAGAAGAGGAG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACTCACCTTGGAAGGCTaGGGGAGCCCCCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDALTLEG*GSPLGF
Trigger: AAACCCAAGGGGGCTCCCCCAGCCTTCCAAGGTGAG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGTGCAAAGCAGAAGTTaGGCCCGAGGGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQVQSRS*ARGPQR
Trigger: TCTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCAC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACTGGAGACCCTTGGATaGCTGAGAACCAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPLETLG*LRTNPK
Trigger: TTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCTCACTGGAGACCCTTaGATGGCTGAGAACCAACCC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADLTGDP*MAENQP
Trigger: GGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTGTCAGCAGCGTGGCTaGGGGACTCAGTATGGTCCC +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQCQQRG*GTQYGP
Trigger: GGGACCATACTGAGTCCCCCAGCCACGCTGCTGACA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGTAATGTCAGCAGCGTaGCTGGGGGACTCAGTATGG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEVMSAA*LGDSVW
Trigger: CCATACTGAGTCCCCCAGCCACGCTGCTGACATTAC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGCCTCTGAAGAGTGGGTaGGACAACCAGATGGGTGTA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLPLKSG*DNQMGV
Trigger: TACACCCATCTGGTTGTCCCACCCACTCTTCAGAGG...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTTAGGCAATGGCTGTTaGAGCATTGGGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLLGNGC*SIGVRA
Trigger: TGCCCTCACCCCAATGCTCCAACAGCCATTGCCTAA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATGGGTTTGGTTTGGCTaGGCTGGGGCTTATTCCACA +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPWVWFG*AGAYST
Trigger: TGTGGAATAAGCCCCAGCCCAGCCAAACCAAACCCA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCAGGCCTCAGGCATCTaGGTTTGGTTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGQASGI*VWFGWA
Trigger: AGCCCAGCCAAACCAAACCCAGATGCCTGAGGCCTG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTGGGCACCTGTCCCCTaGCTCAGGGTCTGTCCCACA +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMWAPVP*LRVCPT
Trigger: TGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCCCGCAGCAGGGAGCTaGTGTTGTAGATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMPAAGS*CCRWAG
Trigger: GCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGAGGGCTGGCCCTGTCTaGAGAGCCAAGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMRAGPV*RAKGTE
Trigger: CTCTGTCCCCTTGGCTCTTCAGACAGGGCCAGCCCT...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCAGCCAGAGACTTCCTaGGCAGGGCTGGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMQPETS*AGLALS
Trigger: AGACAGGGCCAGCCCTGCTCAGGAAGTCTCTGGCTG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGCCTGTGGCCTTGACTaGGCTCCTGAGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQACGLD*APESQG
Trigger: ACCTTGGGACTCAGGAGCTCAGTCAAGGCCACAGGC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAAGCTTTGACTATGTCTaGGGAGACTACGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKESFDYV*GDYAAP
Trigger: CGGAGCTGCGTAGTCTCCTCAGACATAGTCAAAGCT...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGAGGGGCCTGAAGCTTaGCTAAATTCCAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPEGPEA*LNSSGE
Trigger: TTCACCACTGGAATTTAGTCAAGCTTCAGGCCCCTC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGAGGGGCCTGAAGCTTaGCTAAATTCCAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLEGPEA*LNSSGE
Trigger: TTCACCACTGGAATTTAGTCAAGCTTCAGGCCCCTC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATATGGGAATGCACTGTaGCCTGTTTGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPYGNAL*PVCIVP
Trigger: GGGGACAATGCAAACAGGTCACAGTGCATTCCCATA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTGGCTTCAGCTGCCCTaGAGGGGCCGCCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMWLQLP*RGRRIA
Trigger: AGCAATTCGGCGGCCCCTGCAGGGCAGCTGAAGCCA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATTCCATGGCTTCAGCTaGCCTGCAGGGGCCGCCGAA +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAFHGFS*PAGAAE
Trigger: TTCGGCGGCCCCTGCAGGGCAGCTGAAGCCATGGAA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAACCCACACACCCCCTTaGTGTTCAGTCCTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDATHTPP*CSVLPL
Trigger: GAGAGGGAGGACTGAACAGCAAGGGGGTGTGTGGGT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATCACAGGTGGAGAGGTaGGCCTGCGTGATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQSQVER*ACVIQQ
Trigger: CTGCTGGATCACGCAGGCGCACCTCTCCACCTGTGA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATGCCATGGTTGTCACTaGACAGCGTGTATTTCATGG +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRCHGCH*TACISW
Trigger: CCATGAAATACACGCTGTGCAGTGACAACCATGGCA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTCAATCCAGTCCTCCTaGATGCGTGACAGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGSIQSS*MRDSCV
Trigger: GACGCAGCTGTCACGCATGCAGGAGGACTGGATTGA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAACAGTGTCGATGACCTaGTTGAGCTGCTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPTVSMT*LSCLIS
Trigger: GGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGT...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGACAGTGTCGATGACCTaGTTGAGCTGCTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPETVSMT*LSCLIS
Trigger: GGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGT...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACGGCTGACTCCCCAGTaGCATCCTCCTTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCARLTPQ*HPPWPC
Trigger: GCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATAGGTCAGGCTGGTACTaGACGAAGTCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADRSGWY*TKSVWM
Trigger: CATCCAGACAGACTTCGTGCAGTACCAGCCTGACCT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGATCGAAGCTTTGGGATaGCTTTCTCCAACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLIEALG*LSPTPA
Trigger: AGCAGGGGTTGGAGAAAGGCATCCCAAAGCTTCGAT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGTATCCCAGGACACCCTaGTTTGGCCTGGATGAACAT +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEYPRTP*FGLDEH
Trigger: ATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATA...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGGCTGTAAGATACCCCTaGGCTTGTGGCAATTGGGAA +
Preference number: 4 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEAVRYP*ACGNWE
Trigger: TTCCCAATTGCCACAAGCGCAGGGGTATCTTACAGC...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACATCAACTTCCCAGTTaGCCCGTGGTTCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAHQLPS*PVVRGF
Trigger: GAAGCCCCGAACCACGGGCCAACTGGGAAGTTGATG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATAACCCCAAATTAGGATaGGCTGGTCTCGCCGACCAT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADNPKLG*AGLADH
Trigger: ATGGTCGGCGAGACCAGCCCATCCTAATTTGGGGTT...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCCACAGACCTGGGCCTaGGTCACTTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQPQTWA*VTFSRM
Trigger: CATCCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACATCCCTACAATCAGTaGTCAGGCCGCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAHPYNQ*SGRRRR
Trigger: GCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGGTGGATTCTCCAGCTaGGAGCTGGGACTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQGGFSS*ELGLRQ
Trigger: CTGCCTGAGTCCCAGCTCCCAGCTGGAGAATCCACC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACTCACCTTGGAAGGCTaGGGGAGCCCCCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQLTLEG*GSPLGF
Trigger: AAACCCAAGGGGGCTCCCCCAGCCTTCCAAGGTGAG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATTTTTCAGTAAGCTGTaGGTTCCTGAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRFFSKL*VPESSP
Trigger: AGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCTGGGGGACTCAGTATaGTCCCGGGAAAAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLGDSV*SREKSW
Trigger: CCAACTCTTTTCCCGGGACCATACTGAGTCCCCCAG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGTAATGTCAGCAGCGTaGCTGGGGGACTCAGTATGG +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGVMSAA*LGDSVW
Trigger: CCATACTGAGTCCCCCAGCCACGCTGCTGACATTAC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCTCTGAAGAGTGGGTaGGACAACCAGATGGGTGTA +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPLKSG*DNQMGV
Trigger: TACACCCATCTGGTTGTCCCACCCACTCTTCAGAGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTGGCTGTTGGAGCATTaGGGTGAGGGCAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGWLLEH*GEGKQP
Trigger: AGGTTGCTTGCCCTCACCCCAATGCTCCAACAGCCA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGTCCCGGCTTGGCTTTaGATTGGTTTTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADVPAWL*IGFVHC
Trigger: GCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGAC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATGCCTGAGCCTGGACTaGCCGGGCAGTAGTGCCACT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCACLSLD*PGSSAT
Trigger: AGTGGCACTACTGCCCGGCCAGTCCAGGCTCAGGCA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAATACCCCTGCGCTTGTaGCAATTGGGAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEIPLRL*QLGRVC
Trigger: ACACACCCTTCCCAATTGCCACAAGCGCAGGGGTAT...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCTGCTTTGGCCTGGATaGACATCGTGGCTTCAGTAC +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLLWPG*TSWLQY
Trigger: GTACTGAAGCCACGATGTTCATCCAGGCCAAAGCAG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATTCTCGGCAAAGCTTTaGCTATGTCTGAGGAGACTA +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRFSAKL*LCLRRL
Trigger: TAGTCTCCTCAGACATAGTCAAAGCTTTGCCGAGAA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATATGGGAATGCACTGTaGCCTGTTTGCATTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEYGNAL*PVCIVP
Trigger: GGGGACAATGCAAACAGGTCACAGTGCATTCCCATA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTGGGACTGCTGTCACTaGCCTTGTAGGAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGWDCCH*PCRSQN
Trigger: ATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTGCCATGGTTGTCACTaGACAGCGTGTATTTCATGG +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLCHGCH*TACISW
Trigger: CCATGAAATACACGCTGTGCAGTGACAACCATGGCA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTGCATGCGTGACAGCTaGGTCTTCAGGTCATCAATC +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADCMRDS*VFRSSI
Trigger: GATTGATGACCTGAAGACGCAGCTGTCACGCATGCA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTCCACGAAGTACTTCTaGAGCCCCTTGTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADSTKYF*SPLSLS
Trigger: TGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGCCACCTCCATGCTGTaGAGCAGCGTCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAATSML*SSVSSF
Trigger: GAAGCTGGAGACGCTGCTGCACAGCATGGAGGTGGC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACTGAGCACACACACATaGACTCCAGAGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQLSTHT*TPELGQ
Trigger: CTGGCCCAGCTCTGGAGTGCATGTGTGTGTGCTCAG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGGCAGCCTGCACCTTTaGATAGATGCGGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQGSLHL*IDAGSE
Trigger: CTCAGATCCCGCATCTATGCAAAGGTGCAGGCTGCC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGGCCTAATATGGGAATaGACTGTGACCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRGLIWE*TVTCLH
Trigger: ATGCAAACAGGTCACAGTGCATTCCCATATTAGGCC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATCAAATTAGGATGGGCTaGTCTCGCCGACCATCAACT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADQIRMG*SRRPST
Trigger: AGTTGATGGTCGGCGAGACCAGCCCATCCTAATTTG...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGACAGCGTGTATTTCATaGAGCGCCTTGGCGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQTACIS*SALAWD
Trigger: GTCCCACGCCAAGGCGCTCCATGAAATACACGCTGT...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCTGCACTTCAGGCCATaGCTGCCTCCATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQLHFRP*LPPFEE
Trigger: CTCCTCAAATGGAGGCAGCCATGGCCTGAAGTGCAG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATTTTTCAGTAAGCTGTaGGTTCCTGAGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPFFSKL*VPESSP
Trigger: AGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACTCGGGGCAAGTTTCTaGGGGCAGTCATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCALGASF*GQSWPL
Trigger: CAGAGGCCATGACTGCCCCCAGAAACTTGCCCCGAG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGTGCAAAGCAGAAGTTaGGCCCGAGGGCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAVQSRS*ARGPQR
Trigger: TCTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCAC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCCTCTGAAGAGTGGGTaGGACAACCAGATGGGTGTA +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGPLKSG*DNQMGV
Trigger: TACACCCATCTGGTTGTCCCACCCACTCTTCAGAGG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGAGGGCAAGCAACCTTaGCAGATAACCAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQEGKQP*QITRVA
Trigger: GGCCACTCTGGTTATCTGCCAAGGTTGCTTGCCCTC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTCCACAAAGGTTGGCTaGTCTGAGGCCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQSTKVG*SEALTK
Trigger: CTTGGTCAGGGCCTCAGACCAGCCAACCTTTGTGGA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTTGGTTTGGCTGGGCTaGGGCTTATTCCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADLVWLG*GLFHKG
Trigger: ACCTTTGTGGAATAAGCCCCAGCCCAGCCAAACCAA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAAGCTTTGACTATGTCTaGGGAGACTACGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDASFDYV*GDYAAP
Trigger: CGGAGCTGCGTAGTCTCCTCAGACATAGTCAAAGCT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTTCTCGGCAAAGCTTTaGCTATGTCTGAGGAGACTA +
Preference number: 4 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLFSAKL*LCLRRL
Trigger: TAGTCTCCTCAGACATAGTCAAAGCTTTGCCGAGAA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATGCCATGGTTGTCACTaGACAGCGTGTATTTCATGG +
Preference number: 4 (lower is better)
Translates to: RAGGKVTAQREEVLGRKECHGCH*TACISW
Trigger: CCATGAAATACACGCTGTGCAGTGACAACCATGGCA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCATCCTCCTTGGCCATaGCATTCTGGGCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMHPPWP*HSGPPP
Trigger: TGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAACTTCAGGCCATGGCTaGCTCCATTTGAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDATSGHG*LHLRRE
Trigger: CTCTCTCCTCAAATGGAGGCAGCCATGGCCTGAAGT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACCTGGGTCAGTGATCTaGACTTCAGGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAPGSVI*TSGHGC
Trigger: GCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCCTGGGTCAGTGATCTaGACTTCAGGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMPGSVI*TSGHGC
Trigger: GCAGCCATGGCCTGAAGTGCAGATCACTGACCCAGG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCAGTACGCGCCATCCTaGGATTCATCCTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQQYAPS*DSSCQN
Trigger: ATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTATCCCAGGACACCCTaGTTTGGCCTGGATGAACAT +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGYPRTP*FGLDEH
Trigger: ATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGGTCCGTCTACTTCCTaGCAGGGACATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAGPSTS*QGHGHE
Trigger: CTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGGTCCGTCTACTTCCTaGCAGGGACATGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMGPSTS*QGHGHE
Trigger: CTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGGGGGCTTGATGCCATaGTTGTCACTGCACAGCGTG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMGGLMP*LSLHSV
Trigger: CACGCTGTGCAGTGACAACCATGGCATCAAGCCCCC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCAGTGCCATCCTCCTTaGCCATGCCATTCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMQCHPP*PCHSGP
Trigger: TGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCGAAGTCTGTCTGGATaGCACGCTCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMRSLSG*HAPACS
Trigger: GCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTCTGTCCCACAGACCTaGGCCTGGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMSVPQT*AWVTFS
Trigger: GGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGATGACGGGAAAGCCTaGGATGAACAGACAGACACA +
Preference number: 4 (lower is better)
Translates to: NMGMHCDLFALSPRSERGDDGKA*DEQTDT
Trigger: TGTGTCTGTCTGTTCATCCCAGGCTTTCCCGTCATC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCTCCTCTTCTTGTGCTaGTGGATTCTCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQLLFLC*WILQLG
Trigger: TCCCAGCTGGAGAATCCACCAGCACAAGAAGAGGAG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCAGGCCTCAGGCATCTaGGTTTGGTTTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMQASGI*VWFGWA
Trigger: AGCCCAGCCAAACCAAACCCAGATGCCTGAGGCCTG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGTCCCGGCTTGGCTTTaGATTGGTTTTGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQVPAWL*IGFVHC
Trigger: GCAGTGGACAAAACCAATCCAAAGCCAAGCCGGGAC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGCAGCCAGTCCCGGCTTaGCTTTGGATTGGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQQPVPA*LWIGFV
Trigger: GACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTG...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTGTTCTCCAGATGAGTaGATGTGCCCCAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQCSPDE*MCPRQS
Trigger: ACTCTGTCTGGGGCACATTCACTCATCTGGAGAACA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCATGTTCTCCAGATGAGTaGATGTGCCCCAGACAGAGT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDACSPDE*MCPRQS
Trigger: ACTCTGTCTGGGGCACATTCACTCATCTGGAGAACA...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAACTTCCCACATCCCCTaGATTCTTCGTGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDATSHIP*ILREGD
Trigger: ATCCCCTTCACGAAGAATTCAGGGGATGTGGGAAGT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATGGGACTGCTGTCACTaGCCTTGTAGGAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQWDCCH*PCRSQN
Trigger: ATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGCACACCAGCCTCCATaGCACACAGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAAHQPP*HTAASH
Trigger: ATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAATCGAAGCTTTGGGATaGCTTTCTCCAACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAIEALG*LSPTPA
Trigger: AGCAGGGGTTGGAGAAAGGCATCCCAAAGCTTCGAT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAACAGTACGCGCCATCCTaGGATTCATCCTGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQQYAPS*DSSCQN
Trigger: ATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTG...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGGCCTAATATGGGAATaGACTGTGACCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADGLIWE*TVTCLH
Trigger: ATGCAAACAGGTCACAGTGCATTCCCATATTAGGCC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCACAAATTAGGATGGGCTaGTCTCGCCGACCATCAACT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAQIRMG*SRRPST
Trigger: AGTTGATGGTCGGCGAGACCAGCCCATCCTAATTTG...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATGCACGAAGTCTGTCTaGATGGCACGCTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCACTKSV*MARSCM
Trigger: CATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATGCAATTTGTCCAGCTaGTGTACCTCCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQCNLSS*CTSCLG
Trigger: CCCAAGGCAGGAGGTACACCAGCTGGACAAATTGCA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCTCACTGGAGACCCTTaGATGGCTGAGAACCAACCC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMLTGDP*MAENQP
Trigger: GGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGAG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGAGGGCAAGCAACCTTaGCAGATAACCAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAEGKQP*QITRVA
Trigger: GGCCACTCTGGTTATCTGCCAAGGTTGCTTGCCCTC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATGGCTGTTGGAGCATTaGGGTGAGGGCAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAWLLEH*GEGKQP
Trigger: AGGTTGCTTGCCCTCACCCCAATGCTCCAACAGCCA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATGCGCTTGTGGCAATTaGGAAGGGTGTGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQCACGN*EGCVSE
Trigger: CTCACTGACACACCCTTCCCAATTGCCACAAGCGCA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATTCTTGTTCTGGATGTTaGTGTCCACGAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: FFSKLWVPESSPASQPADSCSGC*CPRSTS
Trigger: AGAAGTACTTCGTGGACATCAACATCCAGAACAAGA...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAAGGAGCAGAGGGGCCTaGAGCTTGACTAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCARSRGA*SLTKFQ
Trigger: CTGGAATTTAGTCAAGCTTCAGGCCCCTCTGCTCCT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAAGGTCAGGCTGGTACTaGACGAAGTCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCARSGWY*TKSVWM
Trigger: CATCCAGACAGACTTCGTGCAGTACCAGCCTGACCT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGCTGTAAGATACCCCTaGGCTTGTGGCAATTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQAVRYP*ACGNWE
Trigger: TTCCCAATTGCCACAAGCGCAGGGGTATCTTACAGC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGTGTCAAGGTCAGGCTaGTACTGCACGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMVSRSG*YCTKSV
Trigger: GACAGACTTCGTGCAGTACCAGCCTGACCTTGACAC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTGCAATTTGTCCAGCTaGTGTACCTCCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMCNLSS*CTSCLG
Trigger: CCCAAGGCAGGAGGTACACCAGCTGGACAAATTGCA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACACCCTGCTTTGGCCTaGATGAACATCGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAHPALA*MNIVAS
Trigger: TGAAGCCACGATGTTCATCCAGGCCAAAGCAGGGTG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATTAGGCAATGGCTGTTaGAGCATTGGGGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCALGNGC*SIGVRA
Trigger: TGCCCTCACCCCAATGCTCCAACAGCCATTGCCTAA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAATACCCCTGCGCTTGTaGCAATTGGGAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAIPLRL*QLGRVC
Trigger: ACACACCCTTCCCAATTGCCACAAGCGCAGGGGTAT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCCCCTGAATTCTTCGTaGAGGGGATGGCCTAATATG +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMPLNSS*RGWPNM
Trigger: CATATTAGGCCATCCCCTTCACGAAGAATTCAGGGG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGATCGAAGCTTTGGGATaGCTTTCTCCAACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMIEALG*LSPTPA
Trigger: AGCAGGGGTTGGAGAAAGGCATCCCAAAGCTTCGAT...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR GCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATATCCCAGGACACCCTaGTTTGGCCTGGATGAACAT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAYPRTP*FGLDEH
Trigger: ATGTTCATCCAGGCCAAAGCAGGGTGTCCTGGGATA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR GCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGGCCTAATATGGGAATaGACTGTGACCTGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAGLIWE*TVTCLH
Trigger: ATGCAAACAGGTCACAGTGCATTCCCATATTAGGCC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTCTCCATCGAAGCTTTaGGATGCCTTTCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMSPSKL*DAFLQP
Trigger: GGGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTTGGTTTGGCTGGGCTaGGGCTTATTCCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMLVWLG*GLFHKG
Trigger: ACCTTTGTGGAATAAGCCCCAGCCCAGCCAAACCAA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATTGGTTTGGCTGGGCTaGGGCTTATTCCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCALVWLG*GLFHKG
Trigger: ACCTTTGTGGAATAAGCCCCAGCCCAGCCAAACCAA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAGGGGATGGCCTAATATaGGAATGCACTGTGACCTGT +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAGDGLI*ECTVTC
Trigger: ACAGGTCACAGTGCATTCCCATATTAGGCCATCCCC...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCATCTTGTTCTGGATGTTaGTGTCCACGAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: QPCHIHQNTRHNRKATDASCSGC*CPRSTS
Trigger: AGAAGTACTTCGTGGACATCAACATCCAGAACAAGA...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACACAGGAATAATGACTaGCACACCCAGAAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAHRNND*HTQKCQ
Trigger: TTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR TCA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTCTTGTTCTGGATGTTaGTGTCCACGAAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMSCSGC*CPRSTS
Trigger: AGAAGTACTTCGTGGACATCAACATCCAGAACAAGA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GCACCACTCCGGCCCGGCTTGGCGCAGCGCCTCTGCAGTCGCTGCTaGAGCCGCCTGGCCCTGATCAGCGACCTGCGGAGGCTTCCATGG +
Preference number: 5 (lower is better)
Translates to: APLRPGLAQRLCSRC*SRLALISDLRRLPW
Trigger: CCATGGAAGCCTCCGCAGGTCGCTGATCAGGGCCAGGCGGCTGCAGCAGCGACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTGGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS GCA 90 bp CTCGCACCACTCCGGCCCGGCTTGGCGCAGCGCCTCTGCAGTCGCTaGTGCAGCCGCCTGGCCCTGATCAGCGACCTGCGGAGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LAPLRPGLAQRLCSR*CSRLALISDLRRLP
Trigger: TGGAAGCCTCCGCAGGTCGCTGATCAGGGCCAGGCGGCTGCAGCAGCGACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTGGTGCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS GCA 90 bp GGGGAACGGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTaGCAGAATGGGCCCCCTCAGAGCTGGGAGCCGCCGCCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: GERHPYNQWSGRRRR*QNGPPQSWEPPPAG
Trigger: CCCAGCGGGCGGCGGCTCCCAGCTCTGAGGGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCCGTTCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GCGGAGGCTTCCATGGCTTCAGCTGCCCTGCAGGGGCCGCCGAATTaGTCTCCCGAGCCCCTGCAGGAGGCGGCTAGCTGGGTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: AEASMASAALQGPPN*SPEPLQEAASWVLA
Trigger: GGCGAGCACCCAGCTAGCCGCCTCCTGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTGCAGGGCAGCTGAAGCCATGGAAGCCTCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000649598.1
CDS CCA 90 bp CCGGGCCAGGCCACGTCATCCTCTCGCTGGGGCCGCTGCCCGGCATaGCTTCTCTTCTCACCCTTCGGCAGGACACCCCAGGAGCGAGGG +
Preference number: 5 (lower is better)
Translates to: PGQATSSSRWGRCPA*LLFSPFGRTPQERG
Trigger: CCCTCGCTCCTGGGGTGTCCTGCCGAAGGGTGAGAAGAGAAGCCATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGTGGCCTGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS CCA 90 bp TGGGCTGGCCCTGGCGCCGCTGGGAGCGGCAAAGCCAGGCCACCGTaGGCACGGCCGGCACCACCACAGCCAGCAGATCCACGATGTAGT +
Preference number: 5 (lower is better)
Translates to: WAGPGAAGSGKARPP*ARPAPPQPADPRCS
Trigger: ACTACATCGTGGATCTGCTGGCTGTGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGACAGAGGGGCCGGGTaGGCCCTCGCTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPDRGAG*ALAPSP
Trigger: AGGGGAGGGAGCGAGGGCCAACCCGGCCCCTCTGTC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp AGAAGAGGCAGGTGCTCGTTCTGGCTGGCGGGCAGCTGCGGACACTaGGCGAACACTGCCAGGCCGCTGCGGCCCAAAGTGCCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RRGRCSFWLAGSCGH*ANTARPLRPKVPPL
Trigger: CAGCGGGGGCACTTTGGGCCGCAGCGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCAGAACGAGCACCTGCCTCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCAGGGGCCGCCGAATaGCTCTCCCGAGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRAGAAE*LSRAPA
Trigger: TGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTGC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCGCAGGGGCCGCCGAATaGCTCTCCCGAGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPAGAAE*LSRAPA
Trigger: TGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTGC...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGGCCAGGGTTGGGGTaGGCACCAGGCCGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPWPGLG*APGRCG
Trigger: CCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACCGACTGGCCAGGGTaGGGGTTGGCACCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTDWPG*GLAPGR
Trigger: GCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCACCGACTGGCCAGGGTaGGGGTTGGCACCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPTDWPG*GLAPGR
Trigger: GCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGGT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGCTGCCCTCCGCCACCTaGCGCCCAGCCCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRLPSAT*RPAPSL
Trigger: GAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCAG...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GCGAGGTCTCCTCGGTGCCACAGTCCACCCCCGACGACAGCAGGCTaGTGGCTTCCAGCGCGTCCGTCCGGCTCAGTGTGTCATCGGCTG +
Preference number: 5 (lower is better)
Translates to: ARSPRCHSPPPTTAG*WLPARPSGSVCHRL
Trigger: CAGCCGATGACACACTGAGCCGGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCTGCCCTCCGCCACCTaGCGCCCAGCCCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLPSAT*RPAPSL
Trigger: GAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCAG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GAGGCAGGAAGAAGAGGCAGGTGCTCGTTCTGGCTGGCGGGCAGCTaGGGACACTGGGCGAACACTGCCAGGCCGCTGCGGCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: EAGRRGRCSFWLAGS*GHWANTARPLRPKV
Trigger: CACTTTGGGCCGCAGCGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCAGAACGAGCACCTGCCTCTTCTTCCTGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS CCA 90 bp CGGCTGCTGCAAAGCCACTGTCTGCCCCATCCTCAGCAGAGCCGCTaGAGGGATCACCCGGCTGGCGGTCACCACAGACAGCCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: RLLQSHCLPHPQQSR*RDHPAGGHHRQPGH
Trigger: GTGACCCGGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp AGGTCTCCTCGGTGCCACAGTCCACCCCCGACGACAGCAGGCTGCTaGCTTCCAGCGCGTCCGTCCGGCTCAGTGTGTCATCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RSPRCHSPPPTTAGC*LPARPSGSVCHRLL
Trigger: CAGCAGCCGATGACACACTGAGCCGGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGCAGGGGCCGCCGAATaGCTCTCCCGAGCCCCTGCA +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSAGAAE*LSRAPA
Trigger: TGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTGC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR CAA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCATCCGGGGTCGGGGGCTaGATGCCATGGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPSGVGG*MPWLSL
Trigger: CAGTGACAACCATGGCATCAAGCCCCCGACCCCGGA...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGGCCAGGGTTGGGGTaGGCACCAGGCCGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSWPGLG*APGRCG
Trigger: CCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATCTGCCCTCCGCCACCTaGCGCCCAGCCCCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDLPSAT*RPAPSL
Trigger: GAGAGACGGGGCTGGGCGCAAGGTGGCGGAGGGCAG...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS TCA 90 bp GGATGGAGTGCAAGGCCACAGTGCAGCAGCCCCGCAGCAGGGAGCTaGTGTTGTAGATGGGCTGGCCCTGGCGCCGCTGGGAGCGGCAAA +
Preference number: 5 (lower is better)
Translates to: GWSARPQCSSPAAGS*CCRWAGPGAAGSGK
Trigger: TTTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCATCTACAACATCAGCTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GTCCGTCCGGCTCAGTGTGTCATCGGCTGCTGCAAAGCCACTGTCTaGCCCATCCTCAGCAGAGCCGCTGGAGGGATCACCCGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: VRPAQCVIGCCKATV*PILSRAAGGITRLA
Trigger: CGCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GCTGGCTTCCAGCGCGTCCGTCCGGCTCAGTGTGTCATCGGCTGCTaGAAAGCCACTGTCTGCCCCATCCTCAGCAGAGCCGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: AGFQRVRPAQCVIGC*KATVCPILSRAAGG
Trigger: CCCTCCAGCGGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGACGCGCTGGAAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 90 bp GGACTCGGCTGGCTCAGCGAGCGGCAGCTGATCCTGCGGATGGAGTaGAAGGCCACAGTGCAGCAGCCCCGCAGCAGGGAGCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: GLGWLSERQLILRME*KATVQQPRSRELML
Trigger: CAACATCAGCTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGAGCCAGCCGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp AGCGGGCAGGGGACCCACCGGCTGACTCCCCAGTGCCATCCTCCTTaGCCATGCCATTCTGGGCCACCTCCATGCTGTGCAGCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: SGQGTHRLTPQCHPP*PCHSGPPPCCAAAS
Trigger: AGACGCTGCTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCGGTGGGTCCCCTGCCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp AGGTGCCGTAGGCATCCCGCACGCTCACAGGTGGAGAGGTGCGCCTaGAGGCAGGAAGAAGAGGCAGGTGCTCGTTCTGGCTGGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RCRRHPARSQVERCA*RQEEEAGARSGWRA
Trigger: TGCCCGCCAGCCAGAACGAGCACCTGCCTCTTCTTCCTGCCTCCAGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGCCTACGGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS-3UTR CAA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACCATCAACTTCCCAGTaGGCCCGTGGTTCGGGGCTT +
Preference number: 5 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPPSTSQ*ARGSGL
Trigger: AAGCCCCGAACCACGGGCCAACTGGGAAGTTGATGG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CAA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAACCCCAGCACTGAGCTaGCCGGGCTTAGCTACCTCA +
Preference number: 5 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPTPALS*PGLATS
Trigger: TGAGGTAGCTAAGCCCGGCAAGCTCAGTGCTGGGGT...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCAGTGCAAAGCAGAAGTaGGGCCCGAGGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPSAKQK*GPRAPE
Trigger: CTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCACT...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS GCA 90 bp CAGGGGACCCACCGGCTGACTCCCCAGTGCCATCCTCCTTGGCCATaGCATTCTGGGCCACCTCCATGCTGTGCAGCAGCGTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: QGTHRLTPQCHPPWP*HSGPPPCCAAASPA
Trigger: AGCTGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTGGGGAGTCAGCCGGTGGGTCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCCGGGGTCGGGGGCTaGATGCCATGGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSGVGG*MPWLSL
Trigger: CAGTGACAACCATGGCATCAAGCCCCCGACCCCGGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACCAGGACACCCTGCTTaGGCCTGGATGAACATCGTG +
Preference number: 5 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPPGHPA*AWMNIV
Trigger: CACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCCACTCCGGCCCGGCTaGGCGCAGCGCCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEPLRPG*AQRLCS
Trigger: ACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTGG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS-3UTR CAA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACCACTCCGGCCCGGCTaGGCGCAGCGCCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPPLRPG*AQRLCS
Trigger: ACTGCAGAGGCGCTGCGCCAAGCCGGGCCGGAGTGG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000381873.7
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGATTTCATGGAGCGCCTaGGCGTGGGACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRISWSA*AWDCCH
Trigger: GTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAAT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTCCGGGGTCGGGGGCTaGATGCCATGGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSSGVGG*MPWLSL
Trigger: CAGTGACAACCATGGCATCAAGCCCCCGACCCCGGA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGACCTGCTTGAGCTGCTaGATCTCCTTTCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRTCLSC*ISFRAS
Trigger: GGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGT...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGACAGAGGGGCCGGGTaGGCCCTCGCTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPDRGAG*ALAPSP
Trigger: AGGGGAGGGAGCGAGGGCCAACCCGGCCCCTCTGTC...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCCCCTGCCTCCTCTTCTaGTGCTGGTGGATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPPCLLF*CWWILQ
Trigger: CTGGAGAATCCACCAGCACAAGAAGAGGAGGCAGGG...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCAGTGCAAAGCAGAAGTaGGGCCCGAGGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSSAKQK*GPRAPE
Trigger: CTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCACT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCAGCATCTGGGTTTGGTTaGGCTGGGCTGGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPASGFG*AGLGLI
Trigger: AATAAGCCCCAGCCCAGCCAAACCAAACCCAGATGC...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGGCTTTGGATTGGTTTaGTCCACTGCCCCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRGFGLV*STAPSV
Trigger: CACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCC...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS GCA 90 bp GCCGTGCCCAAGGTCACAGAGGCTTCAGGAGCAGGGCCTCCTGACTaGCGGCACCGAGTCTTCTACTCTACGAGCCAGGCCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AVPKVTEASGAGPPD*RHRVFYSTSQACFF
Trigger: GAAGAAGCAGGCCTGGCTCGTAGAGTAGAAGACTCGGTGCCGGCAGTCAGGAGGCCCTGCTCCTGAAGCCTCTGTGACCTTGGGCACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS GCA 90 bp GGATGGCACGCTCCTGCATGCAGCTGGCCTGCACACCAGCCTCCATaGCACACAGCAGCTTCTCATAGGTGTTGCTGGCAGGGAAGCGGG +
Preference number: 5 (lower is better)
Translates to: GWHAPACSWPAHQPP*HTAASHRCCWQGSG
Trigger: CCCGCTTCCCTGCCAGCAACACCTATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGTGGCCAGGGTTGGGGTaGGCACCAGGCCGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLWPGLG*APGRCG
Trigger: CCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCA...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GCATGCAGGTGCCCCGCCTCACGTGGAGGGCACCGAGCAGAAGGGCAGAGCCCACTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 5 (lower is better)
Translates to: ACRCPASRGGHRAEGQSPLSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...TGGGCTCTGCCCTTCTGCTCGGTGCCCTCCACGTGAGGCGGGGCACCTGCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCCCCTCCCTGCAATTaGTCCAGCTGGTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSPPCN*SSWCTS
Trigger: GGAGGTACACCAGCTGGACAAATTGCAGGGAGGGGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCACCCCAGCACTGAGCTaGCCGGGCTTAGCTACCTCA +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSTPALS*PGLATS
Trigger: TGAGGTAGCTAAGCCCGGCAAGCTCAGTGCTGGGGT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGAGTGCAAAGCAGAAGTaGGGCCCGAGGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWSAKQK*GPRAPE
Trigger: CTCTGGGGCCCTCGGGCCCAACTTCTGCTTTGCACT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCTTGGCCCCAGAACCTaGCAGTTTGTCCCACCCCTC +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSLGPRT*QFVPPL
Trigger: GAGGGGTGGGACAAACTGCAAGGTTCTGGGGCCAAG...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGTGACCTGTTTGCATaGTCCCCCAGGTCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPCDLFA*SPRSER
Trigger: CCTCTCTGACCTGGGGGACAATGCAAACAGGTCACA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTGCACTGTGACCTGTTaGCATTGTCCCCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPCTVTC*HCPPGQ
Trigger: CTGACCTGGGGGACAATGCAAACAGGTCACAGTGCA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS GCA 90 bp AGGTCAGGCTGGTACTGCACGAAGTCTGTCTGGATGGCACGCTCCTaGATGCAGCTGGCCTGCACACCAGCCTCCATGCCACACAGCAGC +
Preference number: 5 (lower is better)
Translates to: RSGWYCTKSVWMARS*MQLACTPASMPHSS
Trigger: GCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp CCACAGCCAGCAGATCCACGATGTAGTGGCGGCTCCAGTAGCTCTTaGGCTCCTTCTCAGCCACGGCAGCCTCCTCCTCCTCTTCCATGG +
Preference number: 5 (lower is better)
Translates to: PQPADPRCSGGSSSS*APSQPRQPPPPLPW
Trigger: CCATGGAAGAGGAGGAGGAGGCTGCCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCCGCCACTACATCGTGGATCTGCTGGCTGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCACCTGCTTGAGCTGCTaGATCTCCTTTCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSTCLSC*ISFRAS
Trigger: GGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGT...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGGACAGAGGGGCCGGGTaGGCCCTCGCTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: NMGMHCDLFALSPRSERGDRGAG*ALAPSP
Trigger: AGGGGAGGGAGCGAGGGCCAACCCGGCCCCTCTGTC...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS GCA 90 bp CAGGCTGGTACTGCACGAAGTCTGTCTGGATGGCACGCTCCTGCATaGAGCTGGCCTGCACACCAGCCTCCATGCCACACAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: QAGTARSLSGWHAPA*SWPAHQPPCHTAAS
Trigger: AGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp GGATGGTGTCAAGGTCAGGCTGGTACTGCACGAAGTCTGTCTGGATaGCACGCTCCTGCATGCAGCTGGCCTGCACACCAGCCTCCATGC +
Preference number: 5 (lower is better)
Translates to: GWCQGQAGTARSLSG*HAPACSWPAHQPPC
Trigger: GCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCATCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 90 bp TCCAGGATGGTGTCAAGGTCAGGCTGGTACTGCACGAAGTCTGTCTaGATGGCACGCTCCTGCATGCAGCTGGCCTGCACACCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRMVSRSGWYCTKSV*MARSCMQLACTPAS
Trigger: GGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCGCCTCCACCAGTGAATaGAATAGGGCTGGTGCACAG +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSASTSE*NRAGAQ
Trigger: CTGTGCACCAGCCCTATTCAATTCACTGGTGGAGGC...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CAA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGATTTCATGGAGCGCCTaGGCGTGGGACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWISWSA*AWDCCH
Trigger: GTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAAT...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTCCGGGGTCGGGGGCTaGATGCCATGGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: TQARLPHMKTARDFLSRASGVGG*MPWLSL
Trigger: CAGTGACAACCATGGCATCAAGCCCCCGACCCCGGA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATTCCCCTCCCTGCAATTaGTCCAGCTGGTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDSPPCN*SSWCTS
Trigger: GGAGGTACACCAGCTGGACAAATTGCAGGGAGGGGA...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGGGCTTTGGATTGGTTTaGTCCACTGCCCCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWGFGLV*STAPSV
Trigger: CACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCC...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCTTTGGATTGGTTTaGTCCACTGCCCCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDGFGLV*STAPSV
Trigger: CACGGAGGGGGCAGTGGACAAAACCAATCCAAAGCC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GCAGGGCAGGGGCCTATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCTGCACTGTGACCTGTTaGCATTGTCCCCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: AGQGPMGNSSPASPHEDSCTVTC*HCPPGQ
Trigger: CTGACCTGGGGGACAATGCAAACAGGTCACAGTGCA...GCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCATAGGCCCCTGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS CCA 90 bp GGTACTGCACGAAGTCTGTCTGGATGGCACGCTCCTGCATGCAGCTaGCCTGCACACCAGCCTCCATGCCACACAGCAGCTTCTCATAGG +
Preference number: 5 (lower is better)
Translates to: GTARSLSGWHAPACS*PAHQPPCHTAASHR
Trigger: CCTATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTGCAGCCCCTTGTCCTaGTCAATCAGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRCSPLS*SIRLFL
Trigger: CAAGAACAACCTGATTGACAAGGACAAGGGGCTGCA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTACCACCACTGCTGAGTaGGGGTCTCTGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: TQARLPHMKTARDFLSRATTTAE*GSLGPE
Trigger: TTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGGT...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACTTGGCCCCAGAACCTaGCAGTTTGTCCCACCCCTC +
Preference number: 5 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPLGPRT*QFVPPL
Trigger: GAGGGGTGGGACAAACTGCAAGGTTCTGGGGCCAAG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS TCA 90 bp CAGGAGCGAGGGCCTGGCAGACCACGGCTGCCTCCACCAGTGAATTaGATAGGGCTGGTGCACAGGTTCCCACCACCCAACTTAAAACCA +
Preference number: 5 (lower is better)
Translates to: QERGPGRPRLPPPVN*IGLVHRFPPPNLKP
Trigger: TGGTTTTAAGTTGGGTGGTGGGAACCTGTGCACCAGCCCTATTCAATTCACTGGTGGAGGCAGCCGTGGTCTGCCAGGCCCTCGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS CCA 90 bp CAGGGTCTGTCCCACAGACCTGGGCCTGGGTCACTTTCTCCAGGATaGTGTCAAGGTCAGGCTGGTACTGCACGAAGTCTGTCTGGATGG +
Preference number: 5 (lower is better)
Translates to: QGLSHRPGPGSLSPG*CQGQAGTARSLSGW
Trigger: CCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACAGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGATTTCATGGAGCGCCTaGGCGTGGGACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SVRAILRFILPEYPTLLQISWSA*AWDCCH
Trigger: GTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAAT...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCTTGATGCCATGGTaGTCACTGCACAGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: GQGGLEETAWSAQGTGQDGLMPW*SLHSVY
Trigger: ATACACGCTGTGCAGTGACAACCATGGCATCAAGCC...ATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTCCTTGTCAATCAGGTaGTTCTTGACAGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRSLSIR*FLTVSM
Trigger: CATCGACACTGTCAAGAACAACCTGATTGACAAGGA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGCTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 5 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWLSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCACCCTGCCTCCTCTTCTaGTGCTGGTGGATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPPCLLF*CWWILQ
Trigger: CTGGAGAATCCACCAGCACAAGAAGAGGAGGCAGGG...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACCAGGACACCCTGCTTaGGCCTGGATGAACATCGTG +
Preference number: 5 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRPGHPA*AWMNIV
Trigger: CACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGG...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGGACCTCATCAGCTCTaGCCAGACGCTGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLGPHQL*PDAGER
Trigger: CCTTTCCCCAGCGTCTGGCAAGAGCTGATGAGGTCC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCTTGGCCCCAGAACCTaGCAGTTTGTCCCACCCCTC +
Preference number: 5 (lower is better)
Translates to: MGNSSPASPHEDSQRLPELGPRT*QFVPPL
Trigger: GAGGGGTGGGACAAACTGCAAGGTTCTGGGGCCAAG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS TCA 90 bp GAGTCTTCTACTCTACGAGCCAGGCCTGCTTCTTCCCCAGGACCCTaGTACTCAGACCCACACACCCCCTTGCTGTTCAGTCCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ESSTLRARPASSPGP*YSDPHTPLLFSPPS
Trigger: AGAGGGAGGACTGAACAGCAAGGGGGTGTGTGGGTCTGAGTATCAGGGTCCTGGGGAAGAAGCAGGCCTGGCTCGTAGAGTAGAAGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CAA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGAGCCTCCACCAGTGAATaGAATAGGGCTGGTGCACAG +
Preference number: 5 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRASTSE*NRAGAQ
Trigger: CTGTGCACCAGCCCTATTCAATTCACTGGTGGAGGC...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CAA 90 bp GCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGTCCTTGTCAATCAGGTaGTTCTTGACAGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: AGKVAWKRRHGVRRALDRSLSIR*FLTVSM
Trigger: CATCGACACTGTCAAGAACAACCTGATTGACAAGGA...CCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTACTTCTGCAGCCCCTaGTCCTTGTCAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWYFCSP*SLSIRL
Trigger: CAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGCATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTGCCAGAATGGGCCCCTTCTTGTTCTGGATGTaGATGTCCACGAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: GIPTISGQAAGAAARMGPFLFWM*MSTKYF
Trigger: GAAGTACTTCGTGGACATCAACATCCAGAACAAGAA...GGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTGGCCAGGGTTGGGGTaGGCACCAGGCCGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMWPGLG*APGRCG
Trigger: CCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATCCCCTCCCTGCAATTaGTCCAGCTGGTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPSPPCN*SSWCTS
Trigger: GGAGGTACACCAGCTGGACAAATTGCAGGGAGGGGA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCCCTGCCTCCTCTTCTaGTGCTGGTGGATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEPCLLF*CWWILQ
Trigger: CTGGAGAATCCACCAGCACAAGAAGAGGAGGCAGGG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp ATGGGCAACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCCAGGACACCCTGCTTaGGCCTGGATGAACATCGTG +
Preference number: 5 (lower is better)
Translates to: MGNSSPASPHEDSQRLPEPGHPA*AWMNIV
Trigger: CACGATGTTCATCCAGGCCAAAGCAGGGTGTCCTGG...CTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGGTTAGGCAATGGCTGTaGGAGCATTGGGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLVRQWL*EHWGEG
Trigger: GCCCTCACCCCAATGCTCCAACAGCCATTGCCTAAC...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ACGGGAAAGCCTGGGATGAACAGACAGACACAGAACCCACACTGCCCTCCGCCAGCAGCCAGTCCCGGCTaGGCTTTGGATTGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: TGKPGMNRQTQNPHCPPPAASPG*ALDWFC
Trigger: ACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGC...TGGCGGAGGGCAGTGTGGGTTCTGTGTCTGTCTGTTCATCCCAGGCTTTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAAGGACCTCATCAGCTCTaGCCAGACGCTGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEGPHQL*PDAGER
Trigger: CCTTTCCCCAGCGTCTGGCAAGAGCTGATGAGGTCC...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGAGCCTGGGCTGCGGGCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGTGCTTTAATTCAGAGTaGTCTGCTGCAGGTACAACT +
Preference number: 5 (lower is better)
Translates to: GAWAAGKVAWKRRHGVRRCFNSE*SAAGTT
Trigger: AGTTGTACCTGCAGCAGACAACTCTGAATTAAAGCA...CCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGCCCGCAGCCCAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS CCA 90 bp CCCAAATTAGGATGGGCTGGTCTCGCCGACCATCAACTTCCCAGTTaGCCCGTGGTTCGGGGCTTCCCGTATTATGCCATTGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: PKLGWAGLADHQLPS*PVVRGFPYYAIDSS
Trigger: AGAGGAGTCAATGGCATAATACGGGAAGCCCCGAACCACGGGCCAACTGGGAAGTTGATGGTCGGCGAGACCAGCCCATCCTAATTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTGGCTTGATGCCATGGTaGTCACTGCACAGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: TQARLPHMKTARDFLSRAGLMPW*SLHSVY
Trigger: ATACACGCTGTGCAGTGACAACCATGGCATCAAGCC...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GCAAGGTGGCTTGGAAGAGACGGCATGGAGTGCGCAGGGCACTGGACAGGATGGTCAATCAGGTTGTTCTaGACAGTGTCGATGACCTGC +
Preference number: 5 (lower is better)
Translates to: ARWLGRDGMECAGHWTGWSIRLF*TVSMTC
Trigger: GCAGGTCATCGACACTGTCAAGAACAACCTGATTGA...CCATCCTGTCCAGTGCCCTGCGCACTCCATGCCGTCTCTTCCAAGCCACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAACCCTGCCTCCTCTTCTaGTGCTGGTGGATTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RAGGKVTAQREEVLGRKEPCLLF*CWWILQ
Trigger: CTGGAGAATCCACCAGCACAAGAAGAGGAGGCAGGG...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGACTGAAGATACCCCTGCGCTaGTGGCAATTGGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: TQYGPGKRVGAVNFPGRLKIPLR*WQLGRV
Trigger: CACCCTTCCCAATTGCCACAAGCGCAGGGGTATCTT...CAGTCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGGACTCAGTATGGTCCCGGGAAAAGAGTTGGGGCAGTGAACTTCCCAGGCCGATGCAGCCCCTTGTCCTaGTCAATCAGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GTQYGPGKRVGAVNFPGRCSPLS*SIRLFL
Trigger: CAAGAACAACCTGATTGACAAGGACAAGGGGCTGCA...TCGGCCTGGGAAGTTCACTGCCCCAACTCTTTTCCCGGGACCATACTGAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTACTTCTGCAGCCCCTaGTCCTTGTCAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TQARLPHMKTARDFLSRAYFCSP*SLSIRL
Trigger: CAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCACTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 5 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPLSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCGGCTTGGCTTTGGATaGGTTTTGTCCACTGCCCCC +
Preference number: 5 (lower is better)
Translates to: NMGMHCDLFALSPRSERGRLGFG*VLSTAP
Trigger: GGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TTTTTCAGTAAGCTGTGGGTTCCTGAGTCCAGCCCTGCCTCCCAGCCTGCAGATGCAGCCAGTCCCGGCTaGGCTTTGGATTGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: FFSKLWVPESSPASQPADAASPG*ALDWFC
Trigger: ACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGC...ATCTGCAGGCTGGGAGGCAGGGCTGGACTCAGGAACCCACAGCTTACTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATGTGACCTGTTTGCATaGTCCCCCAGGTCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: RAGGKVTAQREEVLGRKECDLFA*SPRSER
Trigger: CCTCTCTGACCTGGGGGACAATGCAAACAGGTCACA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS GCA 90 bp CCCTTGTCCTTGTCAATCAGGTTGTTCTTGACAGTGTCGATGACCTaGTTGAGCTGCTTGATCTCCTTTCGGGCCTCCTTCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLSLSIRLFLTVSMT*LSCLISFRASFRAS
Trigger: GCTGGCCCTGAAGGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTGATTGACAAGGACAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGACCTGCTTGAGCTGCTaGATCTCCTTTCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQTCLSC*ISFRAS
Trigger: GGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGT...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TTCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCATACTTCTGCAGCCCCTaGTCCTTGTCAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: FSTRHPAIHPARIPHPPPYFCSP*SLSIRL
Trigger: CAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTA...TGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAACCACCACTGCTGAGTaGGGGTCTCTGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQTTTAE*GSLGPE
Trigger: TTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGGT...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTCCCCTCCCTGCAATTaGTCCAGCTGGTGTACCTCC +
Preference number: 5 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQSPPCN*SSWCTS
Trigger: GGAGGTACACCAGCTGGACAAATTGCAGGGAGGGGA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGGTTAGGCAATGGCTGTaGGAGCATTGGGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQVRQWL*EHWGEG
Trigger: GCCCTCACCCCAATGCTCCAACAGCCATTGCCTAAC...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGTTAGGCAATGGCTGTaGGAGCATTGGGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAVRQWL*EHWGEG
Trigger: GCCCTCACCCCAATGCTCCAACAGCCATTGCCTAAC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGGACCTCATCAGCTCTaGCCAGACGCTGGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQGPHQL*PDAGER
Trigger: CCTTTCCCCAGCGTCTGGCAAGAGCTGATGAGGTCC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACCATCAACTTCCCAGTaGGCCCGTGGTTCGGGGCTT +
Preference number: 5 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAPSTSQ*ARGSGL
Trigger: AAGCCCCGAACCACGGGCCAACTGGGAAGTTGATGG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS-3UTR CAA 90 bp AGGGCAGGAGGAAAAGTCACAGCCCAACGGGAGGAGGTATTAGGCAGGAAGGAATGCAGCCCCTTGTCCTaGTCAATCAGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RAGGKVTAQREEVLGRKECSPLS*SIRLFL
Trigger: CAAGAACAACCTGATTGACAAGGACAAGGGGCTGCA...TTCCTTCCTGCCTAATACCTCCTCCCGTTGGGCTGTGACTTTTCCTCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAACCACCACTGCTGAGTaGGGGTCTCTGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: IPLGEIYNKLHSSPALCATTTAE*GSLGPE
Trigger: TTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGGT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGACCACCACTGCTGAGTaGGGGTCTCTGGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMTTTAE*GSLGPE
Trigger: TTCAGGGCCCAGAGACCCCAACTCAGCAGTGGTGGT...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGCTCTCCATCGAAGCTTaGGGATGCCTTTCTCCAACC +
Preference number: 5 (lower is better)
Translates to: NMGMHCDLFALSPRSERGLSIEA*GCLSPT
Trigger: GGTTGGAGAAAGGCATCCCAAAGCTTCGATGGAGAG...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGACCCCAGCACTGAGCTaGCCGGGCTTAGCTACCTCA +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMTPALS*PGLATS
Trigger: TGAGGTAGCTAAGCCCGGCAAGCTCAGTGCTGGGGT...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGCAGCCAGTCCCGGCTaGGCTTTGGATTGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAAASPG*ALDWFC
Trigger: ACAAAACCAATCCAAAGCCAAGCCGGGACTGGCTGC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAATTTCATGGAGCGCCTaGGCGTGGGACTGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAISWSA*AWDCCH
Trigger: GTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAAT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAGGCTTGATGCCATGGTaGTCACTGCACAGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: QPCHIHQNTRHNRKATDAGLMPW*SLHSVY
Trigger: ATACACGCTGTGCAGTGACAACCATGGCATCAAGCC...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp AATATGGGAATGCACTGTGACCTGTTTGCATTGTCCCCCAGGTCAGAGAGGGGGTGCAGCCCCTTGTCCTaGTCAATCAGGTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: NMGMHCDLFALSPRSERGCSPLS*SIRLFL
Trigger: CAAGAACAACCTGATTGACAAGGACAAGGGGCTGCA...CCCCCTCTCTGACCTGGGGGACAATGCAAACAGGTCACAGTGCATTCCCATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCAGTACGCGCCATCCTGCGATTCATCCTGCCAGAATACCCCACCCTCCTCCAGTTCTTGTTCTGGATGTaGATGTCCACGAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: SVRAILRFILPEYPTLLQFLFWM*MSTKYF
Trigger: GAAGTACTTCGTGGACATCAACATCCAGAACAAGAA...CTGGAGGAGGGTGGGGTATTCTGGCAGGATGAATCGCAGGATGGCGCGTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGCATCTGGGTTTGGTTaGGCTGGGCTGGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQASGFG*AGLGLI
Trigger: AATAAGCCCCAGCCCAGCCAAACCAAACCCAGATGC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGCGGCTTGGCTTTGGATaGGTTTTGTCCACTGCCCCC +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMRLGFG*VLSTAP
Trigger: GGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCG...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCACGGCTTGGCTTTGGATaGGTTTTGTCCACTGCCCCC +
Preference number: 5 (lower is better)
Translates to: IPLGEIYNKLHSSPALCARLGFG*VLSTAP
Trigger: GGGGGCAGTGGACAAAACCAATCCAAAGCCAAGCCG...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp CAGCCCTGTCACATCCACCAAAACACAAGACACAATAGGAAGGCCACAGACGCAAGTCCCGGCTTGGCTTaGGATTGGTTTTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: QPCHIHQNTRHNRKATDASPGLA*DWFCPL
Trigger: CAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACT...TGCGTCTGTGGCCTTCCTATTGTGTCTTGTGTTTTGGTGGATGTGACAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGAGTCCCGGCTTGGCTTaGGATTGGTTTTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQSPGLA*DWFCPL
Trigger: CAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACT...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ACTCAAGCCCGGCTTCCCCACATGAAGACAGCCAGAGACTTCCTGAGCAGGGCTTGCTTTAATTCAGAGTaGTCTGCTGCAGGTACAACT +
Preference number: 5 (lower is better)
Translates to: TQARLPHMKTARDFLSRACFNSE*SAAGTT
Trigger: AGTTGTACCTGCAGCAGACAACTCTGAATTAAAGCA...AGCCCTGCTCAGGAAGTCTCTGGCTGTCTTCATGTGGGGAAGCCGGGCTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAGGCTTGATGCCATGGTaGTCACTGCACAGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQGLMPW*SLHSVY
Trigger: ATACACGCTGTGCAGTGACAACCATGGCATCAAGCC...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp GGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGCAGTACTTCTGCAGCCCCTaGTCCTTGTCAATCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GDPWMAENQPQSEHSAKQYFCSP*SLSIRL
Trigger: CAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTA...CTGCTTTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGGCATCTGGGTTTGGTTaGGCTGGGCTGGGGCTTATT +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMASGFG*AGLGLI
Trigger: AATAAGCCCCAGCCCAGCCAAACCAAACCCAGATGC...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAAAGTCCCGGCTTGGCTTaGGATTGGTTTTGTCCACTG +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQSPGLA*DWFCPL
Trigger: CAGTGGACAAAACCAATCCAAAGCCAAGCCGGGACT...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGAAGATACCCCTGCGCTaGTGGCAATTGGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMKIPLR*WQLGRV
Trigger: CACCCTTCCCAATTGCCACAAGCGCAGGGGTATCTT...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCAAAGATACCCCTGCGCTaGTGGCAATTGGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: IPLGEIYNKLHSSPALCAKIPLR*WQLGRV
Trigger: CACCCTTCCCAATTGCCACAAGCGCAGGGGTATCTT...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp ATCCCCTTGGGAGAAATCTACAATAAACTCCACTCAAGCCCAGCTCTCTGTGCATGTGACCTGTTTGCATaGTCCCCCAGGTCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: IPLGEIYNKLHSSPALCACDLFA*SPRSER
Trigger: CCTCTCTGACCTGGGGGACAATGCAAACAGGTCACA...TGCACAGAGAGCTGGGCTTGAGTGGAGTTTATTGTAGATTTCTCCCAAGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTGCACTGTGACCTGTTaGCATTGTCCCCCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMCTVTC*HCPPGQ
Trigger: CTGACCTGGGGGACAATGCAAACAGGTCACAGTGCA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTCAATCAGGTTGTTCTaGACAGTGTCGATGACCTGC +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMSIRLF*TVSMTC
Trigger: GCAGGTCATCGACACTGTCAAGAACAACCTGATTGA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATCCTTGTCAATCAGGTaGTTCTTGACAGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQSLSIR*FLTVSM
Trigger: CATCGACACTGTCAAGAACAACCTGATTGACAAGGA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TCACTGGAGACCCTTGGATGGCTGAGAACCAACCCCAAAGTGAACATAGTGCAATGCTTTAATTCAGAGTaGTCTGCTGCAGGTACAACT +
Preference number: 5 (lower is better)
Translates to: SLETLGWLRTNPKVNIVQCFNSE*SAAGTT
Trigger: AGTTGTACCTGCAGCAGACAACTCTGAATTAAAGCA...TTGCACTATGTTCACTTTGGGGTTGGTTCTCAGCCATCCAAGGGTCTCCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
CDS-3UTR CAA 90 bp TACCTCACAGGAATAATGACTGACACACCCAGAAGTGCCAAGAGGAAAGGGATGTTCTTGTTCTGGATGTaGATGTCCACGAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: YLTGIMTDTPRSAKRKGMFLFWM*MSTKYF
Trigger: GAAGTACTTCGTGGACATCAACATCCAGAACAAGAA...CATCCCTTTCCTCTTGGCACTTCTGGGTGTGTCAGTCATTATTCCTGTGAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp CGGCCCGGCTTGGCGCAGCGCCTCTGCAGTCGCTGCTaGAGCCGCCTGGCCCTGATCAGCGACCTGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RPGLAQRLCSRC*SRLALISDLRR
Trigger: CCTCCGCAGGTCGCTGATCAGGGCCAGGCGGCTGCAGCAGCGACTGCAGAGGCGCTGCGCCAAGCCGGGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000649598.1
CDS GCA 72 bp CTGGCTGGCGGGCAGCTGCGGACACTGGGCGAACACTaGCAGGCCGCTGCGGCCCAAAGTGCCCCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: LAGGQLRTLGEH*QAAAAQSAPAA
Trigger: CGCAGCGGGGGCACTTTGGGCCGCAGCGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS CCA 72 bp CCTGGCGCCGCTGGGAGCGGCAAAGCCAGGCCACCGTaGGCACGGCCGGCACCACCACAGCCAGCAGATCCA +
Preference number: 6 (lower is better)
Translates to: PGAAGSGKARPP*ARPAPPQPADP
Trigger: TGGATCTGCTGGCTGTGGTGGTGCCGGCCGTGCCCACGGTGGCCTGGCTTTGCCGCTCCCAGCGGCGCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp CGACTGGCCAGGGTTGGGGTTGGCACCAGGCCGCTGTaGGGTGGGTCCACGGGTGATGGGCTCTGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: RLARVGVGTRPL*GGSTGDGLWGL
Trigger: GAGGCCCCAGAGCCCATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp GCAGCTGCGGACACTGGGCGAACACTGCCAGGCCGCTaGGGCCCAAAGTGCCCCCGCTGCGTGATCCAGCAG +
Preference number: 6 (lower is better)
Translates to: AAADTGRTLPGR*GPKCPRCVIQQ
Trigger: CTGCTGGATCACGCAGCGGGGGCACTTTGGGCCGCAGCGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS GCA 72 bp TCCATGGCTTCAGCTGCCCTGCAGGGGCCGCCGAATTaGTCTCCCGAGCCCCTGCAGGAGGCGGCTAGCTGG +
Preference number: 6 (lower is better)
Translates to: SMASAALQGPPN*SPEPLQEAASW
Trigger: CCAGCTAGCCGCCTCCTGCAGGGGCTCGGGAGAGCAATTCGGCGGCCCCTGCAGGGCAGCTGAAGCCATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000649598.1
CDS GCA 72 bp CCTCGGTGCCACAGTCCACCCCCGACGACAGCAGGCTaGTGGCTTCCAGCGCGTCCGTCCGGCTCAGTGTGT +
Preference number: 6 (lower is better)
Translates to: PRCHSPPPTTAG*WLPARPSGSVC
Trigger: ACACACTGAGCCGGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp CCAGGCCGAAGGAGCTGTGCAGCGAGGTCTCCTCGGTaGCACAGTCCACCCCCGACGACAGCAGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PGRRSCAARSPR*HSPPPTTAGCW
Trigger: CCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGCTGCACAGCTCCTTCGGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp CATCCCTACAATCAGTGGTCAGGCCGCAGGCGCCGCTaGCAGAATGGGCCCCCTCAGAGCTGGGAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: HPYNQWSGRRRR*QNGPPQSWEPP
Trigger: CGGCGGCTCCCAGCTCTGAGGGGGCCCATTCTGGCAGCGGCGCCTGCGGCCTGACCACTGATTGTAGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp AGAAGAGGCAGGTGCTCGTTCTGGCTGGCGGGCAGCTaGGGACACTGGGCGAACACTGCCAGGCCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RRGRCSFWLAGS*GHWANTARPLR
Trigger: CCGCAGCGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCAGAACGAGCACCTGCCTCTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS CCA 72 bp AGGTGCTCGTTCTGGCTGGCGGGCAGCTGCGGACACTaGGCGAACACTGCCAGGCCGCTGCGGCCCAAAGTG +
Preference number: 6 (lower is better)
Translates to: RCSFWLAGSCGH*ANTARPLRPKV
Trigger: CACTTTGGGCCGCAGCGGCCTGGCAGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCAGAACGAGCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS GCA 72 bp TGGCTCAGCGAGCGGCAGCTGATCCTGCGGATGGAGTaGAAGGCCACAGTGCAGCAGCCCCGCAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: WLSERQLILRME*KATVQQPRSRE
Trigger: CTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTGAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp GCCACGTCATCCTCTCGCTGGGGCCGCTGCCCGGCATaGCTTCTCTTCTCACCCTTCGGCAGGACACCCCAG +
Preference number: 6 (lower is better)
Translates to: ATSSSRWGRCPA*LLFSPFGRTPQ
Trigger: CTGGGGTGTCCTGCCGAAGGGTGAGAAGAGAAGCCATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS CCA 72 bp CGGTGCCACAGTCCACCCCCGACGACAGCAGGCTGCTaGCTTCCAGCGCGTCCGTCCGGCTCAGTGTGTCAT +
Preference number: 6 (lower is better)
Translates to: RCHSPPPTTAGC*LPARPSGSVCH
Trigger: ATGACACACTGAGCCGGACGGACGCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp CCATCCTCAGCAGAGCCGCTGGAGGGATCACCCGGCTaGCGGTCACCACAGACAGCCGGGTCACTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PSSAEPLEGSPG*RSPQTAGSLSL
Trigger: CAAGCTGAGTGACCCGGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGGATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp CCTTCTCAGCCACGGCAGCCTCCTCCTCCTCTTCCATaGGGCACACCACGCTCACCGACTGGCCAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: PSQPRQPPPPLP*GTPRSPTGQGW
Trigger: CCAACCCTGGCCAGTCGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGGAGGCTGCCGTGGCTGAGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp CAGCGCGTCCGTCCGGCTCAGTGTGTCATCGGCTGCTaGAAAGCCACTGTCTGCCCCATCCTCAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: QRVRPAQCVIGC*KATVCPILSRA
Trigger: GGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGACGCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp CAGCCTCCATGCCACACAGCAGCTTCTCATAGGTGTTaGTGGCAGGGAAGCGGGGGCCCAGGCCGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: QPPCHTAASHRC*WQGSGGPGRRS
Trigger: GCTCCTTCGGCCTGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGCTGCTGTGTGGCATGGAGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp TGGAGGCAGGAAGAAGAGGCAGGTGCTCGTTCTGGCTaGCGGGCAGCTGCGGACACTGGGCGAACACTGCCA +
Preference number: 6 (lower is better)
Translates to: WRQEEEAGARSG*RAAADTGRTLP
Trigger: TGGCAGTGTTCGCCCAGTGTCCGCAGCTGCCCGCCAGCCAGAACGAGCACCTGCCTCTTCTTCCTGCCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS CCA 72 bp AGGCATCCCGCACGCTCACAGGTGGAGAGGTGCGCCTaGAGGCAGGAAGAAGAGGCAGGTGCTCGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: RHPARSQVERCA*RQEEEAGARSG
Trigger: GCCAGAACGAGCACCTGCCTCTTCTTCCTGCCTCCAGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS CCA 72 bp CGAAGAGGTGCCGTAGGCATCCCGCACGCTCACAGGTaGAGAGGTGCGCCTGGAGGCAGGAAGAAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: RRGAVGIPHAHR*RGAPGGRKKRQ
Trigger: CTGCCTCTTCTTCCTGCCTCCAGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGCCTACGGCACCTCTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649598.1
CDS TCA 72 bp TTCCCGTATTATGCCATTGACTCCTCTCAACAACCCTaGGTCCACTGGCCCTCCGCAGCCCCGCCGGCTCGC +
Preference number: 6 (lower is better)
Translates to: FPYYAIDSSQQP*VHWPSAAPPAR
Trigger: GCGAGCCGGCGGGGCTGCGGAGGGCCAGTGGACTCAGGGTTGTTGAGAGGAGTCAATGGCATAATACGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS TCA 72 bp GCCCAAGGTCACAGAGGCTTCAGGAGCAGGGCCTCCTaGCTGCCGGCACCGAGTCTTCTACTCTACGAGCCA +
Preference number: 6 (lower is better)
Translates to: AQGHRGFRSRAS*LPAPSLLLYEP
Trigger: TGGCTCGTAGAGTAGAAGACTCGGTGCCGGCAGTCAGGAGGCCCTGCTCCTGAAGCCTCTGTGACCTTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS TCA 72 bp GGGCCTGGCAGACCACGGCTGCCTCCACCAGTGAATTaGATAGGGCTGGTGCACAGGTTCCCACCACCCAAC +
Preference number: 6 (lower is better)
Translates to: GPGRPRLPPPVN*IGLVHRFPPPN
Trigger: GTTGGGTGGTGGGAACCTGTGCACCAGCCCTATTCAATTCACTGGTGGAGGCAGCCGTGGTCTGCCAGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS GCA 72 bp AAGGTCACAGAGGCTTCAGGAGCAGGGCCTCCTGACTaGCGGCACCGAGTCTTCTACTCTACGAGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: KVTEASGAGPPD*RHRVFYSTSQA
Trigger: GGCCTGGCTCGTAGAGTAGAAGACTCGGTGCCGGCAGTCAGGAGGCCCTGCTCCTGAAGCCTCTGTGACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS GCA 72 bp GCTCAGTGTGTCATCGGCTGCTGCAAAGCCACTGTCTaGCCCATCCTCAGCAGAGCCGCTGGAGGGATCACC +
Preference number: 6 (lower is better)
Translates to: AQCVIGCCKATV*PILSRAAGGIT
Trigger: GGTGATCCCTCCAGCGGCTCTGCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp CGAAGTCTGTCTGGATGGCACGCTCCTGCATGCAGCTaGCCTGCACACCAGCCTCCATGCCACACAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RSLSGWHAPACS*PAHQPPCHTAA
Trigger: AGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp GCAGATCCACGATGTAGTGGCGGCTCCAGTAGCTCTTaGGCTCCTTCTCAGCCACGGCAGCCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: ADPRCSGGSSSS*APSQPRQPPPP
Trigger: AGGAGGAGGAGGCTGCCGTGGCTGAGAAGGAGCCCAAGAGCTACTGGAGCCGCCACTACATCGTGGATCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp GCTCCTGCATGCAGCTGGCCTGCACACCAGCCTCCATaGCACACAGCAGCTTCTCATAGGTGTTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: APACSWPAHQPP*HTAASHRCCWQ
Trigger: CTGCCAGCAACACCTATGAGAAGCTGCTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp ACTGCACGAAGTCTGTCTGGATGGCACGCTCCTGCATaGAGCTGGCCTGCACACCAGCCTCCATGCCACACA +
Preference number: 6 (lower is better)
Translates to: TARSLSGWHAPA*SWPAHQPPCHT
Trigger: TGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp TGGTACTGCACGAAGTCTGTCTGGATGGCACGCTCCTaGATGCAGCTGGCCTGCACACCAGCCTCCATGCCA +
Preference number: 6 (lower is better)
Translates to: WYCTKSVWMARS*MQLACTPASMP
Trigger: TGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CAA 90 bp CCAGGAGCGAGGGCCTGGCAGACCACGGCTGCCTCCACCAGTGAATaGAATAGGGCTGGTGCACAGGTTCCCACCACCCAACTTAAAACC +
Preference number: 6 (lower is better)
Translates to: PGARAWQTTAASTSE*NRAGAQVPTTQLKT
Trigger: GGTTTTAAGTTGGGTGGTGGGAACCTGTGCACCAGCCCTATTCAATTCACTGGTGGAGGCAGCCGTGGTCTGCCAGGCCCTCGCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS GCA 72 bp TGCCGGCACCGAGTCTTCTACTCTACGAGCCAGGCCTaGTTCTTCCCCAGGACCCTGATACTCAGACCCACA +
Preference number: 6 (lower is better)
Translates to: CRHRVFYSTSQA*FFPRTLILRPT
Trigger: TGTGGGTCTGAGTATCAGGGTCCTGGGGAAGAAGCAGGCCTGGCTCGTAGAGTAGAAGACTCGGTGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS CCA 72 bp GGATGGGCTGGTCTCGCCGACCATCAACTTCCCAGTTaGCCCGTGGTTCGGGGCTTCCCGTATTATGCCATT +
Preference number: 6 (lower is better)
Translates to: GWAGLADHQLPS*PVVRGFPYYAI
Trigger: AATGGCATAATACGGGAAGCCCCGAACCACGGGCCAACTGGGAAGTTGATGGTCGGCGAGACCAGCCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS CCA 72 bp CTGGAGCAGGACCAGGAACCCCAAATTAGGATGGGCTaGTCTCGCCGACCATCAACTTCCCAGTTGGCCCGT +
Preference number: 6 (lower is better)
Translates to: LEQDQEPQIRMG*SRRPSTSQLAR
Trigger: ACGGGCCAACTGGGAAGTTGATGGTCGGCGAGACCAGCCCATCCTAATTTGGGGTTCCTGGTCCTGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS CCA 72 bp GTCAGGTACTGCTCCGGGGTCGGGGGCTTGATGCCATaGTTGTCACTGCACAGCGTGTATTTCATGGAGCGC +
Preference number: 6 (lower is better)
Translates to: VRYCSGVGGLMP*LSLHSVYFMER
Trigger: GCGCTCCATGAAATACACGCTGTGCAGTGACAACCATGGCATCAAGCCCCCGACCCCGGAGCAGTACCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp GTGTCAAGGTCAGGCTGGTACTGCACGAAGTCTGTCTaGATGGCACGCTCCTGCATGCAGCTGGCCTGCACA +
Preference number: 6 (lower is better)
Translates to: VSRSGWYCTKSV*MARSCMQLACT
Trigger: TGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CAA 72 bp AGGATGGGCTGGTCTCGCCGACCATCAACTTCCCAGTaGGCCCGTGGTTCGGGGCTTCCCGTATTATGCCAT +
Preference number: 6 (lower is better)
Translates to: RMGWSRRPSTSQ*ARGSGLPVLCH
Trigger: ATGGCATAATACGGGAAGCCCCGAACCACGGGCCAACTGGGAAGTTGATGGTCGGCGAGACCAGCCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS TCA 72 bp TTGGCCCGTGGTTCGGGGCTTCCCGTATTATGCCATTaGCTCCTCTCAACAACCCTGAGTCCACTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LARGSGLPVLCH*LLSTTLSPLAL
Trigger: GAGGGCCAGTGGACTCAGGGTTGTTGAGAGGAGTCAATGGCATAATACGGGAAGCCCCGAACCACGGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS CCA 72 bp CTGGTCTCGCCGACCATCAACTTCCCAGTTGGCCCGTaGTTCGGGGCTTCCCGTATTATGCCATTGACTCCT +
Preference number: 6 (lower is better)
Translates to: LVSPTINFPVGP*FGASRIMPLTP
Trigger: AGGAGTCAATGGCATAATACGGGAAGCCCCGAACCACGGGCCAACTGGGAAGTTGATGGTCGGCGAGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS CCA 72 bp GACTCCTGGAGCAGGACCAGGAACCCCAAATTAGGATaGGCTGGTCTCGCCGACCATCAACTTCCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: DSWSRTRNPKLG*AGLADHQLPSW
Trigger: CCAACTGGGAAGTTGATGGTCGGCGAGACCAGCCCATCCTAATTTGGGGTTCCTGGTCCTGCTCCAGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS CAA 72 bp GTTGGCCCGTGGTTCGGGGCTTCCCGTATTATGCCATaGACTCCTCTCAACAACCCTGAGTCCACTGGCCCT +
Preference number: 6 (lower is better)
Translates to: VGPWFGASRIMP*TPLNNPESTGP
Trigger: AGGGCCAGTGGACTCAGGGTTGTTGAGAGGAGTCAATGGCATAATACGGGAAGCCCCGAACCACGGGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381867.6
CDS CAA 72 bp AGGTACTGCTCCGGGGTCGGGGGCTTGATGCCATGGTaGTCACTGCACAGCGTGTATTTCATGGAGCGCCTT +
Preference number: 6 (lower is better)
Translates to: RYCSGVGGLMPW*SLHSVYFMERL
Trigger: AAGGCGCTCCATGAAATACACGCTGTGCAGTGACAACCATGGCATCAAGCCCCCGACCCCGGAGCAGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CCA 72 bp TGGGTCACTTTCTCCAGGATGGTGTCAAGGTCAGGCTaGTACTGCACGAAGTCTGTCTGGATGGCACGCTCC +
Preference number: 6 (lower is better)
Translates to: WVTFSRMVSRSG*YCTKSVWMARS
Trigger: GGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGAGAAAGTGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp ACTTTCTCCAGGATGGTGTCAAGGTCAGGCTGGTACTaGACGAAGTCTGTCTGGATGGCACGCTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: TFSRMVSRSGWY*TKSVWMARSCM
Trigger: CATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGAGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS TCA 72 bp AAAGTAATCAGTCCAACCCTGTGTTCTCCAGATGAGTaGATGTGCCCCAGACAGAGTGAAGGCCGTGCCCAA +
Preference number: 6 (lower is better)
Translates to: KVISPTLCSPDE*MCPRQSEGRAQ
Trigger: TTGGGCACGGCCTTCACTCTGTCTGGGGCACATTCACTCATCTGGAGAACACAGGGTTGGACTGATTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381867.6
ENST00000614659.1
CDS GCA 72 bp TTGTCAATCAGGTTGTTCTTGACAGTGTCGATGACCTaGTTGAGCTGCTTGATCTCCTTTCGGGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LSIRLFLTVSMT*LSCLISFRASF
Trigger: GAAGGAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTGATTGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CAA 72 bp AAGTACTTCTGCAGCCCCTTGTCCTTGTCAATCAGGTaGTTCTTGACAGTGTCGATGACCTGCTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: KYFCSPLSLSIR*FLTVSMTCLSC
Trigger: GCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CAA 72 bp TTGATGTCCACGAAGTACTTCTGCAGCCCCTTGTCCTaGTCAATCAGGTTGTTCTTGACAGTGTCGATGACC +
Preference number: 6 (lower is better)
Translates to: LMSTKYFCSPLS*SIRLFLTVSMT
Trigger: GGTCATCGACACTGTCAAGAACAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS CAA 72 bp TGGATGTTGATGTCCACGAAGTACTTCTGCAGCCCCTaGTCCTTGTCAATCAGGTTGTTCTTGACAGTGTCG +
Preference number: 6 (lower is better)
Translates to: WMLMSTKYFCSP*SLSIRLFLTVS
Trigger: CGACACTGTCAAGAACAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1
CDS GCA 72 bp TTCTTGTTCTGGATGTTGATGTCCACGAAGTACTTCTaGAGCCCCTTGTCCTTGTCAATCAGGTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: FLFWMLMSTKYF*SPLSLSIRLFL
Trigger: CAAGAACAACCTGATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCAGAACAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381867.6
ENST00000381873.7
ENST00000614659.1
ENST00000649598.1