Pregenerated sensors for SNORD89 (Homo sapiens)
Ensembl gene IDs: ENSG00000212283Ensembl transcript IDs: ENST00000390981.1
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | GCTTCAGGATATTTTGTCATCGTGTGCCCATGGAGAGCAAACTGCTaGTGGAGACACTGCAATTCGGCCTTTTCTTGTCATCATTCCTCA | + |
Preference number: 5 (lower is better) Translates to: ASGYFVIVCPWRANC*WRHCNSAFSCHHSS Trigger: TGAGGAATGATGACAAGAAAAGGCCGAATTGCAGTGTCTCCATCAGCAGTTTGCTCTCCATGGGCACACGATGACAAAATATCCTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390981.1 |
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CDS TCA 72 bp | TATTTTGTCATCGTGTGCCCATGGAGAGCAAACTGCTaGTGGAGACACTGCAATTCGGCCTTTTCTTGTCAT | + |
Preference number: 6 (lower is better) Translates to: YFVIVCPWRANC*WRHCNSAFSCH Trigger: ATGACAAGAAAAGGCCGAATTGCAGTGTCTCCATCAGCAGTTTGCTCTCCATGGGCACACGATGACAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390981.1 |