Pregenerated sensors for SNORD3H (Homo sapiens)
Ensembl gene IDs: ENSG00000207215Ensembl transcript IDs: ENST00000384486.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | TCTCCCAGAGGAAGAGAAGAACGATCATCAATGGCAAATGGCAGTTaGAGAGAAGCAACACTGAGAGCTCACTTCATGCTCAGAAGAGAA | + |
Preference number: 5 (lower is better) Translates to: SPRGREERSSMANGS*REATLRAHFMLRRE Trigger: TTCTCTTCTGAGCATGAAGTGAGCTCTCAGTGTTGCTTCTCTGCAACTGCCATTTGCCATTGATGATCGTTCTTCTCTTCCTCTGGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000384486.2 |
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CDS TCA 72 bp | CATCAATGGCAAATGGCAGTTGCAGAGAAGCAACACTaGGAGCTCACTTCATGCTCAGAAGAGAAGGCAGCT | + |
Preference number: 6 (lower is better) Translates to: HQWQMAVAEKQH*ELTSCSEEKAA Trigger: AGCTGCCTTCTCTTCTGAGCATGAAGTGAGCTCTCAGTGTTGCTTCTCTGCAACTGCCATTTGCCATTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000384486.2 |
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CDS GCA 72 bp | GGAAGAGAAGAACGATCATCAATGGCAAATGGCAGTTaGAGAGAAGCAACACTGAGAGCTCACTTCATGCTC | + |
Preference number: 6 (lower is better) Translates to: GREERSSMANGS*REATLRAHFML Trigger: GAGCATGAAGTGAGCTCTCAGTGTTGCTTCTCTGCAACTGCCATTTGCCATTGATGATCGTTCTTCTCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000384486.2 |
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CDS CAA 72 bp | AGGAAGAGAAGAACGATCATCAATGGCAAATGGCAGTaGCAGAGAAGCAACACTGAGAGCTCACTTCATGCT | + |
Preference number: 6 (lower is better) Translates to: RKRRTIINGKWQ*QRSNTESSLHA Trigger: AGCATGAAGTGAGCTCTCAGTGTTGCTTCTCTGCAACTGCCATTTGCCATTGATGATCGTTCTTCTCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000384486.2 |