Pregenerated sensors for SNORD3G (Homo sapiens)
Ensembl gene IDs: ENSG00000199666Ensembl transcript IDs: ENST00000362796.2
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CTCTCCCAGAGAAGAGAAGAACGATCATCAATGGCCAATGGCAGTTaGAGCGAAGCCACACCAAGAGCCGGCTTCATGCTCAGGAGAGAA | + |
Preference number: 5 (lower is better) Translates to: LSQRREERSSMANGS*SEATPRAGFMLRRE Trigger: TTCTCTCCTGAGCATGAAGCCGGCTCTTGGTGTGGCTTCGCTGCAACTGCCATTGGCCATTGATGATCGTTCTTCTCTTCTCTGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS CCA 90 bp | TCTCTTACTCTCCCAGAGAAGAGAAGAACGATCATCAATGGCCAATaGCAGTTGCAGCGAAGCCACACCAAGAGCCGGCTTCATGCTCAG | + |
Preference number: 5 (lower is better) Translates to: SLTLPEKRRTIINGQ*QLQRSHTKSRLHAQ Trigger: CTGAGCATGAAGCCGGCTCTTGGTGTGGCTTCGCTGCAACTGCCATTGGCCATTGATGATCGTTCTTCTCTTCTCTGGGAGAGTAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS CCA 90 bp | AGAGCCGGCTTCATGCTCAGGAGAGAACGCTGCACTTCCTGCTCATaGTTTCCGGTGCTCTACAAGTTCACAGAAACTTCTCTAGTAGTG | + |
Preference number: 5 (lower is better) Translates to: RAGFMLRRERCTSCS*FPVLYKFTETSLVV Trigger: CACTACTAGAGAAGTTTCTGTGAACTTGTAGAGCACCGGAAACCATGAGCAGGAAGTGCAGCGTTCTCTCCTGAGCATGAAGCCGGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS GCA 72 bp | ACACCAAGAGCCGGCTTCATGCTCAGGAGAGAACGCTaGACTTCCTGCTCATGGTTTCCGGTGCTCTACAAG | + |
Preference number: 6 (lower is better) Translates to: TPRAGFMLRRER*TSCSWFPVLYK Trigger: CTTGTAGAGCACCGGAAACCATGAGCAGGAAGTGCAGCGTTCTCTCCTGAGCATGAAGCCGGCTCTTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS GCA 72 bp | GCCGGCTTCATGCTCAGGAGAGAACGCTGCACTTCCTaGTCATGGTTTCCGGTGCTCTACAAGTTCACAGAA | + |
Preference number: 6 (lower is better) Translates to: AGFMLRRERCTS*SWFPVLYKFTE Trigger: TTCTGTGAACTTGTAGAGCACCGGAAACCATGAGCAGGAAGTGCAGCGTTCTCTCCTGAGCATGAAGCCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS CCA 72 bp | CTCCCAGAGAAGAGAAGAACGATCATCAATGGCCAATaGCAGTTGCAGCGAAGCCACACCAAGAGCCGGCTT | + |
Preference number: 6 (lower is better) Translates to: LPEKRRTIINGQ*QLQRSHTKSRL Trigger: AAGCCGGCTCTTGGTGTGGCTTCGCTGCAACTGCCATTGGCCATTGATGATCGTTCTTCTCTTCTCTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS CAA 90 bp | ACTCTCCCAGAGAAGAGAAGAACGATCATCAATGGCCAATGGCAGTaGCAGCGAAGCCACACCAAGAGCCGGCTTCATGCTCAGGAGAGA | + |
Preference number: 6 (lower is better) Translates to: TLPEKRRTIINGQWQ*QRSHTKSRLHAQER Trigger: TCTCTCCTGAGCATGAAGCCGGCTCTTGGTGTGGCTTCGCTGCAACTGCCATTGGCCATTGATGATCGTTCTTCTCTTCTCTGGGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS CCA 72 bp | TCTTACTCTCCCAGAGAAGAGAAGAACGATCATCAATaGCCAATGGCAGTTGCAGCGAAGCCACACCAAGAG | + |
Preference number: 6 (lower is better) Translates to: SYSPREEKNDHQ*PMAVAAKPHQE Trigger: CTCTTGGTGTGGCTTCGCTGCAACTGCCATTGGCCATTGATGATCGTTCTTCTCTTCTCTGGGAGAGTAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |
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CDS CCA 72 bp | TTCATGCTCAGGAGAGAACGCTGCACTTCCTGCTCATaGTTTCCGGTGCTCTACAAGTTCACAGAAACTTCT | + |
Preference number: 6 (lower is better) Translates to: FMLRRERCTSCS*FPVLYKFTETS Trigger: AGAAGTTTCTGTGAACTTGTAGAGCACCGGAAACCATGAGCAGGAAGTGCAGCGTTCTCTCCTGAGCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362796.2 |