Pregenerated sensors for SNORD16 (Homo sapiens)

Ensembl gene IDs: ENSG00000199673

Ensembl transcript IDs: ENST00000362803.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	TTCTGTACCAGCTTACTGACAGCAGGCAACTGTCGCTaGGAACAGAGTAAGACGCAAATTACGACATCATTG	+
Preference number: 6 (lower is better) Translates to: FCTSLLTAGNCR*EQSKTQITTSL Trigger: CAATGATGTCGTAATTTGCGTCTTACTCTGTTCTCAGCGACAGTTGCCTGCTGTCAGTAAGCTGGTACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000362803.1
CDS TCA 72 bp	AGTAAGAATTTTCGTCAACCTTCTGTACCAGCTTACTaGCAGCAGGCAACTGTCGCTGAGAACAGAGTAAGA	+
Preference number: 6 (lower is better) Translates to: SKNFRQPSVPAY*QQATVAENRVR Trigger: TCTTACTCTGTTCTCAGCGACAGTTGCCTGCTGTCAGTAAGCTGGTACAGAAGGTTGACGAAAATTCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000362803.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu