Pregenerated sensors for SNORC (Homo sapiens)
Ensembl gene IDs: ENSG00000182600Ensembl transcript IDs: ENST00000331342.4, ENST00000409230.5, ENST00000409533.5, ENST00000449331.3, ENST00000467665.1, ENST00000476690.1, ENST00000481155.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCGGACGGGCTAAGACCGCTGGCCGCACACCCGCTCCGATGCCCTaGCGGCCCCGGCGCACGCGCACCGGGCACGCACATGCGGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: PGRAKTAGRTPAPMP*RPRRTRTGHAHAAR Trigger: GCGCGCCGCATGTGCGTGCCCGGTGCGCGTGCGCCGGGGCCGCCAGGGCATCGGAGCGGGTGTGCGGCCAGCGGTCTTAGCCCGTCCGGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 90 bp | GTGCCCCCGGACGGGCTAAGACCGCTGGCCGCACACCCGCTCCGATaGCCTGGCGGCCCCGGCGCACGCGCACCGGGCACGCACATGCGG | + |
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Preference number: 5 (lower is better) Translates to: VPPDGLRPLAAHPLR*PGGPGARAPGTHMR Trigger: CCGCATGTGCGTGCCCGGTGCGCGTGCGCCGGGGCCGCCAGGGCATCGGAGCGGGTGTGCGGCCAGCGGTCTTAGCCCGTCCGGGGGCAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS CCA 90 bp | GCCGCCCTGGTCCAGCCGCTCCTGCGCGGTGCTGTCCTCGGGTCCTaGCGCGACGGTGGGGGCTGGGGGACCGGTGTCCACGGGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: AALVQPLLRGAVLGS*RDGGGWGTGVHGLP Trigger: CGGGAGCCCGTGGACACCGGTCCCCCAGCCCCCACCGTCGCGCCAGGACCCGAGGACAGCACCGCGCAGGAGCGGCTGGACCAGGGCGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000331342.4 ENST00000409230.5 ENST00000409533.5 ENST00000449331.3 ENST00000467665.1 ENST00000476690.1 |
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| CDS GCA 90 bp | TCCGATGCCCTGGCGGCCCCGGCGCACGCGCACCGGGCACGCACATaGGGCGCGCTCCTGAGGCACTCCAGCCGTGGTGCACGGGGACGC | + |
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Preference number: 5 (lower is better) Translates to: SDALAAPAHAHRART*GALLRHSSRGARGR Trigger: GCGTCCCCGTGCACCACGGCTGGAGTGCCTCAGGAGCGCGCCGCATGTGCGTGCCCGGTGCGCGTGCGCCGGGGCCGCCAGGGCATCGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 90 bp | AGGCACTCCAGCCGTGGTGCACGGGGACGCCGAGCCGCGCGGCCCTaGGCGCGCTCAGGTGCACGCCACACGCAGGCGGGCTCGGACATG | + |
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Preference number: 5 (lower is better) Translates to: RHSSRGARGRRAARP*ARSGARHTQAGSDM Trigger: CATGTCCGAGCCCGCCTGCGTGTGGCGTGCACCTGAGCGCGCGCAGGGCCGCGCGGCTCGGCGTCCCCGTGCACCACGGCTGGAGTGCCT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS CCA 90 bp | GCGCGCACCCCCGCCCTGAGCGCTCGCCTGCGCGCGCTCACGCTCTaGCACACCTGCATGCGCGGACACGCACGCGCGGACATACAGGCG | + |
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Preference number: 5 (lower is better) Translates to: ARTPALSARLRALTL*HTCMRGHARADIQA Trigger: CGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGCCAGAGCGTGAGCGCGCGCAGGCGAGCGCTCAGGGCGGGGGTGCGCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS TCA 90 bp | GCACACCTGCATGCGCGGACACGCACGCGCGGACATACAGGCGCGTaGGGAGTGCAGCCGAGTCGCGCCGCGGCCGGGCGCGGCCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: AHLHARTRTRGHTGA*GVQPSRAAAGRGPF Trigger: AAAGGGGCCGCGCCCGGCCGCGGCGCGACTCGGCTGCACTCCTCACGCGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 90 bp | CCCGCCCTGAGCGCTCGCCTGCGCGCGCTCACGCTCTGGCACACCTaGATGCGCGGACACGCACGCGCGGACATACAGGCGCGTGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PALSARLRALTLWHT*MRGHARADIQAREE Trigger: CTCCTCACGCGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGCCAGAGCGTGAGCGCGCGCAGGCGAGCGCTCAGGGCGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 90 bp | TGCATGCGCGGACACGCACGCGCGGACATACAGGCGCGTGAGGAGTaGAGCCGAGTCGCGCCGCGGCCGGGCGCGGCCCCTTTATTCGCT | + |
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Preference number: 5 (lower is better) Translates to: CMRGHARADIQAREE*SRVAPRPGAAPLFA Trigger: AGCGAATAAAGGGGCCGCGCCCGGCCGCGGCGCGACTCGGCTGCACTCCTCACGCGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 90 bp | CGGGGCCTTCTCCCGACGGCAGCTCGGCCGGCTCGTTCCACAGCGTaGGCACGGGCTCCTGTGGAACATCGTCAGCCAGCCCACCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: RGLLPTAARPARSTA*ARAPVEHRQPAHPS Trigger: ACTGGGGTGGGCTGGCTGACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCGTCGGGAGAAGGCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449331.3 |
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| CDS CCA 90 bp | CGGCAGCTCGGCCGGCTCGTTCCACAGCGTGGGCACGGGCTCCTGTaGAACATCGTCTGCAAAGCCAAGGAGAGGTGCTGGGGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RQLGRLVPQRGHGLL*NIVCKAKERCWGPR Trigger: CCTGGGGCCCCAGCACCTCTCCTTGGCTTTGCAGACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 90 bp | CGGGGCCTTCTCCCGACGGCAGCTCGGCCGGCTCGTTCCACAGCGTaGGCACGGGCTCCTGTGGAACATCGTCTGCAAAGCCAAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RGLLPTAARPARSTA*ARAPVEHRLQSQGE Trigger: CTCTCCTTGGCTTTGCAGACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCGTCGGGAGAAGGCCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 90 bp | CGGGGCCTTCTCCCGACGGCAGCTCGGCCGGCTCGTTCCACAGCGTaGGCACGGGCTCCTGTGGAACATCGTATTTCCCAGGCTAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RGLLPTAARPARSTA*ARAPVEHRISQAKK Trigger: CTTCTTAGCCTGGGAAATACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCGTCGGGAGAAGGCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476690.1 |
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| CDS GCA 90 bp | GGGCCCTACAGGGGATCTCACCACAGGCATGGGGCTGGGACTTCCTaGACTGCCCAGAAACAGGCCCTGGGCCCTTCACACCTTCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: GPYRGSHHRHGAGTS*TAQKQALGPSHLQL Trigger: TAACTGAAGGTGTGAAGGGCCCAGGGCCTGTTTCTGGGCAGTGCAGGAAGTCCCAGCCCCATGCCTGTGGTGAGATCCCCTGTAGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 90 bp | CACCACTCCAACCCTGGGCCATCCATCCCCGGCAACCAGACAGGATaGCCCAGAAACGCTGGAAAGCTCAACATGGGGATGGTAGGTCGG | + |
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Preference number: 5 (lower is better) Translates to: HHSNPGPSIPGNQTG*PRNAGKLNMGMVGR Trigger: CCGACCTACCATCCCCATGTTGAGCTTTCCAGCGTTTCTGGGGCATCCTGTCTGGTTGCCGGGGATGGATGGCCCAGGGTTGGAGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449331.3 |
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| CDS GCA 90 bp | CTACAGGGGATCTCACCACAGGCATGGGGCTGGGACTTCCTGCACTaGCCAGAAACAGGCCCTGGGCCCTTCACACCTTCAGTTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQGISPQAWGWDFLH*PETGPGPFTPSVTQ Trigger: CTGGGTAACTGAAGGTGTGAAGGGCCCAGGGCCTGTTTCTGGGCAGTGCAGGAAGTCCCAGCCCCATGCCTGTGGTGAGATCCCCTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 90 bp | CCCACTCAGGAATCTTCAGATACATTAAGCTGTCCCCAAGGGGTCTaGTGGCCTCCAAACTGTCCAACCCTTCCCTCCAAAGGCCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PTQESSDTLSCPQGV*WPPNCPTLPSKGPG Trigger: CCCAGGGCCTTTGGAGGGAAGGGTTGGACAGTTTGGAGGCCAGCAGACCCCTTGGGGACAGCTTAATGTATCTGAAGATTCCTGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 90 bp | TCCAGAAACAGAAAGGGCTGTTTGACGGAGCTGGGGACGCCCCTCTaGTGCAGTGGAAATGAGGACACAGCTTTGGAAGACCGTAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SRNRKGCLTELGTPL*CSGNEDTALEDRRG Trigger: GCCTCTACGGTCTTCCAAAGCTGTGTCCTCATTTCCACTGCAGCAGAGGGGCGTCCCCAGCTCCGTCAAACAGCCCTTTCTGTTTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 90 bp | GGGTGTTTGGTTCCAGGTAGTGAGAGAGGAGCACCCCTTCAAGGCTaGTCGAGGAGGCATGTCCCAAAGGAAGAGTTCAAGGCGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: GCLVPGSERGAPLQG*SRRHVPKEEFKAVS Trigger: GGAAACCGCCTTGAACTCTTCCTTTGGGACATGCCTCCTCGACCAGCCTTGAAGGGGTGCTCCTCTCTCACTACCTGGAACCAAACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS TCA 90 bp | ATTTGGGCCTCCACTTGTAGGACTCCAGAAACAGAAAGGGCTGTTTaGCGGAGCTGGGGACGCCCCTCTGCTGCAGTGGAAATGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: IWASTCRTPETERAV*RSWGRPSAAVEMRT Trigger: TGTCCTCATTTCCACTGCAGCAGAGGGGCGTCCCCAGCTCCGTCAAACAGCCCTTTCTGTTTCTGGAGTCCTACAAGTGGAGGCCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 90 bp | AAGGTCTACTCTTTATTGCCCTTGTACACAAAGGAAGGGGGTGTTTaGTTCCAGGTAGTGAGAGAGGAGCACCCCTTCAAGGCTGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: KVYSLLPLYTKEGGV*FQVVREEHPFKAGR Trigger: TCGACCAGCCTTGAAGGGGTGCTCCTCTCTCACTACCTGGAACCAAACACCCCCTTCCTTTGTGTACAAGGGCAATAAAGAGTAGACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 90 bp | CTGAGCAGGTTAAATGATCAAAGGATCAAAGTTTACATCTCTAAATaGTTCCGAGGTGGGGACCCTGGACCAGGCTCCTCACCCTCACTC | + |
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Preference number: 5 (lower is better) Translates to: LSRLNDQRIKVYISK*FRGGDPGPGSSPSL Trigger: GAGTGAGGGTGAGGAGCCTGGTCCAGGGTCCCCACCTCGGAAGCATTTAGAGATGTAAACTTTGATCCTTTGATCATTTAACCTGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | GCGACCCGCCGCCCTGGTCCAGCCGCTCCTGCGCGGTaGTGTCCTCGGGTCCTGGCGCGACGGTGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATRRPGPAAPAR*CPRVLARRWGL Trigger: CAGCCCCCACCGTCGCGCCAGGACCCGAGGACAGCACCGCGCAGGAGCGGCTGGACCAGGGCGGCGGGTCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000331342.4 ENST00000409230.5 ENST00000409533.5 ENST00000449331.3 ENST00000467665.1 ENST00000476690.1 |
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| CDS GCA 72 bp | GACGGGCTAAGACCGCTGGCCGCACACCCGCTCCGATaGCCTGGCGGCCCCGGCGCACGCGCACCGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: DGLRPLAAHPLR*PGGPGARAPGT Trigger: CGTGCCCGGTGCGCGTGCGCCGGGGCCGCCAGGGCATCGGAGCGGGTGTGCGGCCAGCGGTCTTAGCCCGTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 72 bp | GGACACGCACGCGCGGACATACAGGCGCGTGAGGAGTaGAGCCGAGTCGCGCCGCGGCCGGGCGCGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: GHARADIQAREE*SRVAPRPGAAP Trigger: AGGGGCCGCGCCCGGCCGCGGCGCGACTCGGCTGCACTCCTCACGCGCCTGTATGTCCGCGCGTGCGTGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | GGGACGCCGAGCCGCGCGGCCCTGCGCGCGCTCAGGTaGACGCCACACGCAGGCGGGCTCGGACATGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GTPSRAALRALR*TPHAGGLGHAV Trigger: CACAGCATGTCCGAGCCCGCCTGCGTGTGGCGTGCACCTGAGCGCGCGCAGGGCCGCGCGGCTCGGCGTCCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 72 bp | CTGGCGGCCCCGGCGCACGCGCACCGGGCACGCACATaGGGCGCGCTCCTGAGGCACTCCAGCCGTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LAAPAHAHRART*GALLRHSSRGA Trigger: TGCACCACGGCTGGAGTGCCTCAGGAGCGCGCCGCATGTGCGTGCCCGGTGCGCGTGCGCCGGGGCCGCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS TCA 72 bp | CATGCGCGGACACGCACGCGCGGACATACAGGCGCGTaGGGAGTGCAGCCGAGTCGCGCCGCGGCCGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: HARTRTRGHTGA*GVQPSRAAAGR Trigger: GCGCCCGGCCGCGGCGCGACTCGGCTGCACTCCTCACGCGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS TCA 72 bp | CGCACGCGCACCGGGCACGCACATGCGGCGCGCTCCTaGGGCACTCCAGCCGTGGTGCACGGGGACGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: RTRTGHAHAARS*GTPAVVHGDAE Trigger: CTCGGCGTCCCCGTGCACCACGGCTGGAGTGCCTCAGGAGCGCGCCGCATGTGCGTGCCCGGTGCGCGTGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 72 bp | GCTCAGGTGCACGCCACACGCAGGCGGGCTCGGACATaGTGTGCGCTCACGCACGCCCCGGCGCCCCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: AQVHATRRRART*CALTHAPAPLR Trigger: CCGCAGGGGCGCCGGGGCGTGCGTGAGCGCACAGCATGTCCGAGCCCGCCTGCGTGTGGCGTGCACCTGAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS CCA 72 bp | CCCGCCCTGAGCGCTCGCCTGCGCGCGCTCACGCTCTaGCACACCTGCATGCGCGGACACGCACGCGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: PALSARLRALTL*HTCMRGHARAD Trigger: GTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGCCAGAGCGTGAGCGCGCGCAGGCGAGCGCTCAGGGCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 72 bp | GCTAAGACCGCTGGCCGCACACCCGCTCCGATGCCCTaGCGGCCCCGGCGCACGCGCACCGGGCACGCACAT | + |
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Preference number: 6 (lower is better) Translates to: AKTAGRTPAPMP*RPRRTRTGHAH Trigger: ATGTGCGTGCCCGGTGCGCGTGCGCCGGGGCCGCCAGGGCATCGGAGCGGGTGTGCGGCCAGCGGTCTTAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 72 bp | CTCGCCTGCGCGCGCTCACGCTCTGGCACACCTGCATaGGCGGACACGCACGCGCGGACATACAGGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LACARSRSGTPA*ADTHARTYRRV Trigger: CACGCGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGCCAGAGCGTGAGCGCGCGCAGGCGAG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | AGCGCTCGCCTGCGCGCGCTCACGCTCTGGCACACCTaGATGCGCGGACACGCACGCGCGGACATACAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SARLRALTLWHT*MRGHARADIQA Trigger: CGCCTGTATGTCCGCGCGTGCGTGTCCGCGCATGCAGGTGTGCCAGAGCGTGAGCGCGCGCAGGCGAGCGCT 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | CAGGGGCCAGAACCCCGGAGACCAGCAGCAGCGCCATaGGCAGGGCCAGACAGGATGCCATCCTGGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: QGPEPRRPAAAP*AGPDRMPSWPG Trigger: TCCCGGCCAGGATGGCATCCTGTCTGGCCCTGCGCATGGCGCTGCTGCTGGTCTCCGGGGTTCTGGCCCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331342.4 ENST00000409230.5 ENST00000409533.5 |
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| CDS CCA 72 bp | CTCCCGACGGCAGCTCGGCCGGCTCGTTCCACAGCGTaGGCACGGGCTCCTGTGGAACATCGTCAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPTAARPARSTA*ARAPVEHRQPA Trigger: GGCTGGCTGACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCGTCGGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449331.3 |
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| CDS CCA 72 bp | CTCCCGACGGCAGCTCGGCCGGCTCGTTCCACAGCGTaGGCACGGGCTCCTGTGGAACATCGTCTGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LPTAARPARSTA*ARAPVEHRLQS Trigger: GCTTTGCAGACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCGTCGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 72 bp | CTCCCGACGGCAGCTCGGCCGGCTCGTTCCACAGCGTaGGCACGGGCTCCTGTGGAACATCGTATTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPTAARPARSTA*ARAPVEHRISQ Trigger: CTGGGAAATACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCCGAGCTGCCGTCGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476690.1 |
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| CDS CCA 72 bp | GGCCGGCTCGTTCCACAGCGTGGGCACGGGCTCCTGTaGAACATCGTCTGCAAAGCCAAGGAGAGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GRLVPQRGHGLL*NIVCKAKERCW Trigger: CCAGCACCTCTCCTTGGCTTTGCAGACGATGTTCCACAGGAGCCCGTGCCCACGCTGTGGAACGAGCCGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS TCA 72 bp | GACTTGGATGAGGCCTTGACCCTATCCCCCAGTGTGTaGGAGGTGCGCGGGCACCACCTGGGCTCCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: DLDEALTLSPSV*EVRGHHLGSSV Trigger: GACACTGGAGCCCAGGTGGTGCCCGCGCACCTCTCACACACTGGGGGATAGGGTCAAGGCCTCATCCAAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | AGGGGATCTCACCACAGGCATGGGGCTGGGACTTCCTaGACTGCCCAGAAACAGGCCCTGGGCCCTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: RGSHHRHGAGTS*TAQKQALGPSH Trigger: GTGTGAAGGGCCCAGGGCCTGTTTCTGGGCAGTGCAGGAAGTCCCAGCCCCATGCCTGTGGTGAGATCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 72 bp | TATCCCCCAGTGTGTGAGAGGTGCGCGGGCACCACCTaGGCTCCAGTGTCCAGGAGGAGAAAGTCACGGCAG | + |
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Preference number: 6 (lower is better) Translates to: YPPVCERCAGTT*APVSRRRKSRQ Trigger: CTGCCGTGACTTTCTCCTCCTGGACACTGGAGCCCAGGTGGTGCCCGCGCACCTCTCACACACTGGGGGATA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | CCCCAGCTCCACCTCAGTGTGCTGAGGGGTCCTGTGTaGCCAGGACCACGATCTCTGCCAGGACACAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PQLHLSVLRGPV*PGPRSLPGHSF Trigger: GAAACTGTGTCCTGGCAGAGATCGTGGTCCTGGGCACACAGGACCCCTCAGCACACTGAGGTGGAGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | ATCTCACCACAGGCATGGGGCTGGGACTTCCTGCACTaGCCAGAAACAGGCCCTGGGCCCTTCACACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ISPQAWGWDFLH*PETGPGPFTPS Trigger: TGAAGGTGTGAAGGGCCCAGGGCCTGTTTCTGGGCAGTGCAGGAAGTCCCAGCCCCATGCCTGTGGTGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | AACCCTGGGCCATCCATCCCCGGCAACCAGACAGGATaGCCCAGAAACGCTGGAAAGCTCAACATGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: NPGPSIPGNQTG*PRNAGKLNMGM Trigger: CATCCCCATGTTGAGCTTTCCAGCGTTTCTGGGGCATCCTGTCTGGTTGCCGGGGATGGATGGCCCAGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449331.3 |
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| CDS TCA 72 bp | TCCACTTGTAGGACTCCAGAAACAGAAAGGGCTGTTTaGCGGAGCTGGGGACGCCCCTCTGCTCCTCACGGA | + |
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Preference number: 6 (lower is better) Translates to: STCRTPETERAV*RSWGRPSAPHG Trigger: TCCGTGAGGAGCAGAGGGGCGTCCCCAGCTCCGTCAAACAGCCCTTTCTGTTTCTGGAGTCCTACAAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481155.1 |
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| CDS CAA 72 bp | ACGCCCCTCTGCTGCAGTGGAAATGAGGACACAGCTTaGGAAGACCGTAGAGGCCCCGAAGTGTCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: TPLCCSGNEDTA*EDRRGPEVSMV Trigger: CACCATGGACACTTCGGGGCCTCTACGGTCTTCCAAAGCTGTGTCCTCATTTCCACTGCAGCAGAGGGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS TCA 72 bp | TCCACTTGTAGGACTCCAGAAACAGAAAGGGCTGTTTaGCGGAGCTGGGGACGCCCCTCTGCTGCAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: STCRTPETERAV*RSWGRPSAAVE Trigger: TTCCACTGCAGCAGAGGGGCGTCCCCAGCTCCGTCAAACAGCCCTTTCTGTTTCTGGAGTCCTACAAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | AGGGTTGGGAAGGAGTTGGGTGGCCATTGGTCCCCGTaGCTTTTGAGGATGGGAAACAGCATGTTGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RVGKELGGHWSP*LLRMGNSMLGW Trigger: CCAACCCAACATGCTGTTTCCCATCCTCAAAAGGCACGGGGACCAATGGCCACCCAACTCCTTCCCAACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | AGAAAGGGCTGTTTGACGGAGCTGGGGACGCCCCTCTaGTGCAGTGGAAATGAGGACACAGCTTTGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RKGCLTELGTPL*CSGNEDTALED Trigger: GTCTTCCAAAGCTGTGTCCTCATTTCCACTGCAGCAGAGGGGCGTCCCCAGCTCCGTCAAACAGCCCTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CAA 72 bp | GGGAAGGAGTTGGGTGGCCATTGGTCCCCGTGCCTTTaGAGGATGGGAAACAGCATGTTGGGTTGGATCGTC | + |
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Preference number: 6 (lower is better) Translates to: GKELGGHWSPCL*RMGNSMLGWIV Trigger: GACGATCCAACCCAACATGCTGTTTCCCATCCTCAAAAGGCACGGGGACCAATGGCCACCCAACTCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 72 bp | GTTCCAGGTAGTGAGAGAGGAGCACCCCTTCAAGGCTaGTCGAGGAGGCATGTCCCAAAGGAAGAGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: VPGSERGAPLQG*SRRHVPKEEFK Trigger: CTTGAACTCTTCCTTTGGGACATGCCTCCTCGACCAGCCTTGAAGGGGTGCTCCTCTCTCACTACCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS CCA 72 bp | TCTTCAGATACATTAAGCTGTCCCCAAGGGGTCTGCTaGCCTCCAAACTGTCCAACCCTTCCCTCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SSDTLSCPQGVC*PPNCPTLPSKG Trigger: GCCTTTGGAGGGAAGGGTTGGACAGTTTGGAGGCCAGCAGACCCCTTGGGGACAGCTTAATGTATCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CCA 72 bp | AACAGCCAGGGCCTTGCCTCAACATGGGAACGGATTTaGGCCTCCACTTGTAGGACTCCAGAAACAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: NSQGLASTWERI*ASTCRTPETER Trigger: CCTTTCTGTTTCTGGAGTCCTACAAGTGGAGGCCCAAATCCGTTCCCATGTTGAGGCAAGGCCCTGGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS CCA 72 bp | CCTTCTCTGCTTATAGGGTTGGGAGTTGGCAGGATTTaGGGTACCCAGGGACCAGAGAGCAGAAAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: PSLLIGLGVGRI*GTQGPESRKET Trigger: TGTCTCCTTTCTGCTCTCTGGTCCCTGGGTACCCCAAATCCTGCCAACTCCCAACCCTATAAGCAGAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476690.1 |
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| CDS TCA 72 bp | AGACTGGTTGAGTGGGAAGCTGTTAACAGACTTGGATaGGGCCTTGACCCTATCCCCCAGTGTGTGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RLVEWEAVNRLG*GLDPIPQCVRG Trigger: ACCTCTCACACACTGGGGGATAGGGTCAAGGCCTCATCCAAGTCTGTTAACAGCTTCCCACTCAACCAGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS CAA 90 bp | GAAGGTCTACTCTTTATTGCCCTTGTACACAAAGGAAGGGGGTGTTaGGTTCCAGGTAGTGAGAGAGGAGCACCCCTTCAAGGCTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: EGLLFIALVHKGRGC*VPGSERGAPLQGWS Trigger: CGACCAGCCTTGAAGGGGTGCTCCTCTCTCACTACCTGGAACCAAACACCCCCTTCCTTTGTGTACAAGGGCAATAAAGAGTAGACCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 72 bp | GAATCTTCAGATACATTAAGCTGTCCCCAAGGGGTCTaGTGGCCTCCAAACTGTCCAACCCTTCCCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: ESSDTLSCPQGV*WPPNCPTLPSK Trigger: TTTGGAGGGAAGGGTTGGACAGTTTGGAGGCCAGCAGACCCCTTGGGGACAGCTTAATGTATCTGAAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS GCA 72 bp | TTAACTCTGGGTTCTCCATGCCTGGCCCGGAGTAGGTaGTCAGTGCTTGTTGAAGAAGGACTTTTAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LTLGSPCLARSR*SVLVEEGLLKQ Trigger: CTGCTTTAAAAGTCCTTCTTCAACAAGCACTGAGCACCTACTCCGGGCCAGGCATGGAGAACCCAGAGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409230.5 |
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| CDS CCA 72 bp | TCTTTATTGCCCTTGTACACAAAGGAAGGGGGTGTTTaGTTCCAGGTAGTGAGAGAGGAGCACCCCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLLPLYTKEGGV*FQVVREEHPFK Trigger: CTTGAAGGGGTGCTCCTCTCTCACTACCTGGAACCAAACACCCCCTTCCTTTGTGTACAAGGGCAATAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467665.1 ENST00000481155.1 |
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| CDS GCA 72 bp | TTAAATGATCAAAGGATCAAAGTTTACATCTCTAAATaGTTCCGAGGTGGGGACCCTGGACCAGGCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LNDQRIKVYISK*FRGGDPGPGSS Trigger: TGAGGAGCCTGGTCCAGGGTCCCCACCTCGGAAGCATTTAGAGATGTAAACTTTGATCCTTTGATCATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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| CDS TCA 72 bp | GTCAGTTTCATAGCACTCCTTTATAAGCAGAATCATTaGACTCACAGTGTATTTTGGGGAGACTGGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: VSFIALLYKQNH*THSVFWGDWLS Trigger: ACTCAACCAGTCTCCCCAAAATACACTGTGAGTTCAATGATTCTGCTTATAAAGGAGTGCTATGAAACTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467665.1 |
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