Pregenerated sensors for SNORA79B (Homo sapiens)

Ensembl gene IDs: ENSG00000222489

Ensembl transcript IDs: ENST00000410557.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	CAGCCAGCCCATCCTCATGGTGCCCTGAGTGAAGATAAGCCATTTTaGATATATGATGGATCAAAATCCCACTGCCTAAGGCTTCAAGCA	+
Preference number: 6 (lower is better) Translates to: QPAHPHGALSEDKPF*IYDGSKSHCLRLQA Trigger: TGCTTGAAGCCTTAGGCAGTGGGATTTTGATCCATCATATATCAAAAATGGCTTATCTTCACTCAGGGCACCATGAGGATGGGCTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000410557.1
CDS GCA 72 bp	AAGCCATTTTTGATATATGATGGATCAAAATCCCACTaGCTAAGGCTTCAAGCAGTGAGAGGAACAGCCATC	+
Preference number: 6 (lower is better) Translates to: KPFLIYDGSKSH*LRLQAVRGTAI Trigger: GATGGCTGTTCCTCTCACTGCTTGAAGCCTTAGGCAGTGGGATTTTGATCCATCATATATCAAAAATGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000410557.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu