Pregenerated sensors for SNORA65 (Homo sapiens)
Ensembl gene IDs: ENSG00000201302Ensembl transcript IDs: ENST00000364432.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAACAACCCTGTTTCCTAAGCTGGGGTTTACTATCAGCTCACCACTaGATTGCACCAGCCAACAGAGACCTGGTCAGGTGCAGTGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: EQPCFLSWGLLSAHH*IAPANRDLVRCSGG Trigger: CCCGCCACTGCACCTGACCAGGTCTCTGTTGGCTGGTGCAATCCAGTGGTGAGCTGATAGTAAACCCCAGCTTAGGAAACAGGGTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364432.1 |
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| CDS CCA 90 bp | TCGGCACAGAGTCATCCACATGAAGAACAACCCTGTTTCCTAAGCTaGGGTTTACTATCAGCTCACCACTGGATTGCACCAGCCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: SAQSHPHEEQPCFLS*GLLSAHHWIAPANR Trigger: TCTGTTGGCTGGTGCAATCCAGTGGTGAGCTGATAGTAAACCCCAGCTTAGGAAACAGGGTTGTTCTTCATGTGGATGACTCTGTGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000364432.1 |
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| CDS GCA 72 bp | CCTAAGCTGGGGTTTACTATCAGCTCACCACTGGATTaGACCAGCCAACAGAGACCTGGTCAGGTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PKLGFTISSPLD*TSQQRPGQVQW Trigger: CCACTGCACCTGACCAGGTCTCTGTTGGCTGGTGCAATCCAGTGGTGAGCTGATAGTAAACCCCAGCTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364432.1 |
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| CDS CCA 72 bp | TGTTTCCTAAGCTGGGGTTTACTATCAGCTCACCACTaGATTGCACCAGCCAACAGAGACCTGGTCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CFLSWGLLSAHH*IAPANRDLVRC Trigger: GCACCTGACCAGGTCTCTGTTGGCTGGTGCAATCCAGTGGTGAGCTGATAGTAAACCCCAGCTTAGGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364432.1 |
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| CDS TCA 72 bp | GGCTGTTCCCATGCTTTCGGCACAGAGTCATCCACATaGAGAACAACCCTGTTTCCTAAGCTGGGGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: GCSHAFGTESST*RTTLFPKLGFT Trigger: AGTAAACCCCAGCTTAGGAAACAGGGTTGTTCTTCATGTGGATGACTCTGTGCCGAAAGCATGGGAACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364432.1 |
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| CDS CCA 72 bp | AGTCATCCACATGAAGAACAACCCTGTTTCCTAAGCTaGGGTTTACTATCAGCTCACCACTGGATTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: SHPHEEQPCFLS*GLLSAHHWIAP Trigger: TGGTGCAATCCAGTGGTGAGCTGATAGTAAACCCCAGCTTAGGAAACAGGGTTGTTCTTCATGTGGATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000364432.1 |
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