Pregenerated sensors for SNORA54 (Homo sapiens)

Ensembl gene IDs: ENSG00000207008

Ensembl transcript IDs: ENST00000384281.1, ENST00000622631.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CCAGTCAGTCAGTCATGTGTCGCTGGAAATGCTATTGCACCGGAATaGAACCCATTAGCTACAGCCAGGCTAACGGGTTACGAACAGTGC	+
Preference number: 5 (lower is better) Translates to: PVSQSCVAGNAIAPE*NPLATARLTGYEQC Trigger: GCACTGTTCGTAACCCGTTAGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTGACTGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1
CDS GCA 90 bp	CTGAAAGCCACCAGTCAGTCAGTCATGTGTCGCTGGAAATGCTATTaGACCGGAATGGAACCCATTAGCTACAGCCAGGCTAACGGGTTA	+
Preference number: 5 (lower is better) Translates to: LKATSQSVMCRWKCY*TGMEPISYSQANGL Trigger: TAACCCGTTAGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTGACTGACTGGTGGCTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1
CDS GCA 90 bp	CTGAAACTGAAAGCCACCAGTCAGTCAGTCATGTGTCGCTGGAAATaGTATTGCACCGGAATGGAACCCATTAGCTACAGCCAGGCTAAC	+
Preference number: 5 (lower is better) Translates to: LKLKATSQSVMCRWK*YCTGMEPISYSQAN Trigger: GTTAGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTGACTGACTGGTGGCTTTCAGTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1
CDS GCA 72 bp	ACCAGTCAGTCAGTCATGTGTCGCTGGAAATGCTATTaGACCGGAATGGAACCCATTAGCTACAGCCAGGCT	+
Preference number: 6 (lower is better) Translates to: TSQSVMCRWKCY*TGMEPISYSQA Trigger: AGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTGACTGACTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1
CDS CCA 72 bp	CAGTCATGTGTCGCTGGAAATGCTATTGCACCGGAATaGAACCCATTAGCTACAGCCAGGCTAACGGGTTAC	+
Preference number: 6 (lower is better) Translates to: QSCVAGNAIAPE*NPLATARLTGY Trigger: GTAACCCGTTAGCCTGGCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1
CDS GCA 72 bp	AAAGCCACCAGTCAGTCAGTCATGTGTCGCTGGAAATaGTATTGCACCGGAATGGAACCCATTAGCTACAGC	+
Preference number: 6 (lower is better) Translates to: KATSQSVMCRWK*YCTGMEPISYS Trigger: GCTGTAGCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTGACTGACTGGTGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1
CDS CCA 72 bp	AAACTGAAAGCCACCAGTCAGTCAGTCATGTGTCGCTaGAAATGCTATTGCACCGGAATGGAACCCATTAGC	+
Preference number: 6 (lower is better) Translates to: KLKATSQSVMCR*KCYCTGMEPIS Trigger: GCTAATGGGTTCCATTCCGGTGCAATAGCATTTCCAGCGACACATGACTGACTGACTGGTGGCTTTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000384281.1 ENST00000622631.1

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