Pregenerated sensors for SNORA35 (Homo sapiens)
Ensembl gene IDs: ENSG00000208839Ensembl transcript IDs: ENST00000386104.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 90 bp | AGTAGCCCACGGTGTGACTCTCCCAGCTTTGAGAGGGATTTGCTTTaGCACCGCTTGATGCCCAGTTGGTCAAGATGGAGCCCAATGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSPRCDSPSFERDLL*HRLMPSWSRWSPMG Trigger: ACCCATTGGGCTCCATCTTGACCAACTGGGCATCAAGCGGTGCAAAAGCAAATCCCTCTCAAAGCTGGGAGAGTCACACCGTGGGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000386104.1 |
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| CDS TCA 72 bp | CTCCCAGCTTTGAGAGGGATTTGCTTTTGCACCGCTTaGTGCCCAGTTGGTCAAGATGGAGCCCAATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPALRGICFCTA*CPVGQDGAQWV Trigger: GACCCATTGGGCTCCATCTTGACCAACTGGGCATCAAGCGGTGCAAAAGCAAATCCCTCTCAAAGCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000386104.1 |
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| CDS CCA 72 bp | GAGAGGGATTTGCTTTTGCACCGCTTGATGCCCAGTTaGTCAAGATGGAGCCCAATGGGTCACTTGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ERDLLLHRLMPS*SRWSPMGHLAV Trigger: CACTGCCAAGTGACCCATTGGGCTCCATCTTGACCAACTGGGCATCAAGCGGTGCAAAAGCAAATCCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000386104.1 |
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| CDS CAA 72 bp | CGGTGTGACTCTCCCAGCTTTGAGAGGGATTTGCTTTaGCACCGCTTGATGCCCAGTTGGTCAAGATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RCDSPSFERDLL*HRLMPSWSRWS Trigger: GCTCCATCTTGACCAACTGGGCATCAAGCGGTGCAAAAGCAAATCCCTCTCAAAGCTGGGAGAGTCACACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000386104.1 |
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| CDS CAA 72 bp | TCTCCCAGCTTTGAGAGGGATTTGCTTTTGCACCGCTaGATGCCCAGTTGGTCAAGATGGAGCCCAATGGGT | + |
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Preference number: 6 (lower is better) Translates to: SPSFERDLLLHR*MPSWSRWSPMG Trigger: ACCCATTGGGCTCCATCTTGACCAACTGGGCATCAAGCGGTGCAAAAGCAAATCCCTCTCAAAGCTGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000386104.1 |
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