RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNHG7 (Homo sapiens)

Ensembl gene IDs: ENSG00000233016

Ensembl transcript IDs: ENST00000414282.5, ENST00000436596.2, ENST00000447221.1, ENST00000653276.1, ENST00000663097.1, ENST00000668354.1

Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CGGGCCAGCAGGTATAGCCACTGGCAGGGCGGGTGGGCCTGGGGCTaGTACTGCCCGTGCAGTGGGAGGGGGATGTCTGCACGGAGGACC +
Preference number: 5 (lower is better)
Translates to: RASRYSHWQGGWAWG*YCPCSGRGMSARRT
Trigger: GGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCACCCGCCCTGCCAGTGGCTATACCTGCTGGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp CCACTGGCAGGGCGGGTGGGCCTGGGGCTGATACTGCCCGTGCAGTaGGAGGGGGATGTCTGCACGGAGGACCTCTGTGGCCCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: PLAGRVGLGLILPVQ*EGDVCTEDLCGPVQ
Trigger: CTGGACAGGGCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCACCCGCCCTGCCAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp GGCAGTGGCCTTTGCTGTGCCGTCCTGTTACAGGAGCCAGGATGGTaGGGACGGGACCGGACCGGAGGGTTGGCGGGGCTGCCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GSGLCCAVLLQEPGW*GRDRTGGLAGLPLQ
Trigger: CTGCAGGGGCAGCCCCGCCAACCCTCCGGTCCGGTCCCGTCCCCACCATCCTGGCTCCTGTAACAGGACGGCACAGCAAAGGCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp GGTCCAGAGCTGGGTCGGCTGGGCGGAGAGCTGCCTCCAGGTTCCTaGCTCTGGCCCTGGCGTGGGGTCGACACTGGGTGTGGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GPELGRLGGELPPGS*LWPWRGVDTGCGVC
Trigger: ACACACACCACACCCAGTGTCGACCCCACGCCAGGGCCAGAGGCAGGAACCTGGAGGCAGCTCTCCGCCCAGCCGACCCAGCTCTGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp GGCTGCGTCCTCCACCCGTGTAGCTGTGGGCTGGGACCCCTAACCTaGCAGATGTGCTGGTCTGGCCGGCAGACCACCCCGCCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GCVLHPCSCGLGPLT*QMCWSGRQTTPPGG
Trigger: TCCTCCTGGCGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACACGGGTGGAGGACGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp CAGCAGGCGGCCCTGGCACCAACATGCCCAGCGCAAAGGCACAGATaGGCCCAAGTGGACCCTGGGCAGACCTCCCATCCCCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: QQAALAPTCPAQRHR*AQVDPGQTSHPPAP
Trigger: AGGGGCTGGGGGATGGGAGGTCTGCCCAGGGTCCACTTGGGCCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGCCGCCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp GTGGGCCTGGGGCTGATACTGCCCGTGCAGTGGGAGGGGGATGTCTaGACGGAGGACCTCTGTGGCCCTGTCCAGGTGTACAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VGLGLILPVQWEGDV*TEDLCGPVQVYSGL
Trigger: GAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp ACCTGTGTGAGCTGCATATGGTGGAGTGGAGGACCTGCCTCTCGGTaGCCCCGGGCCAGCAGGTATAGCCACTGGCAGGGCGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: TCVSCIWWSGGPASR*PRASRYSHWQGGWA
Trigger: GGCCCACCCGCCCTGCCAGTGGCTATACCTGCTGGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 90 bp TGCGTGCCCTCTGCCCTGTGCCGATTCTCATCCTCAGGGAAGCTCTaGGGCTTCTCTGCCCAGGTGCCCACCCCCGAGCTCCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: CVPSALCRFSSSGKL*GFSAQVPTPELPRC
Trigger: GCACCTGGGGAGCTCGGGGGTGGGCACCTGGGCAGAGAAGCCTCAGAGCTTCCCTGAGGATGAGAATCGGCACAGGGCAGAGGGCACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp GCCGATTCTCATCCTCAGGGAAGCTCTGAGGCTTCTCTGCCCAGGTaGCCACCCCCGAGCTCCCCAGGTGCACCCAAGGCTGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ADSHPQGSSEASLPR*PPPSSPGAPKAARR
Trigger: CCTCCTGGCAGCCTTGGGTGCACCTGGGGAGCTCGGGGGTGGGCACCTGGGCAGAGAAGCCTCAGAGCTTCCCTGAGGATGAGAATCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp AGGGGAGGCTCCTGCAGTCAAGGGCCGTGTGTCCAGCAGGGCAGGTaGCCCGAATGGAGACCAGGGCTTGTGGAAAGGGGCCGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RGGSCSQGPCVQQGR*PEWRPGLVERGRFP
Trigger: TGGGAAGCGGCCCCTTTCCACAAGCCCTGGTCTCCATTCGGGGCACCTGCCCTGCTGGACACACGGCCCTTGACTGCAGGAGCCTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp GCAAGGGGATCATCTCGGGCTCCGTCTGCCAGGACCTGTGTGAGCTaGATATGGTGGAGTGGAGGACCTGCCTCTCGGTGGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: ARGSSRAPSARTCVS*IWWSGGPASRWPRA
Trigger: GGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp CACCCGTGTAGCTGTGGGCTGGGACCCCTAACCTGGCAGATGTGCTaGTCTGGCCGGCAGACCACCCCGCCAGGAGGACCAGGTAAAGGC +
Preference number: 5 (lower is better)
Translates to: HPCSCGLGPLTWQMC*SGRQTTPPGGPGKG
Trigger: GCCTTTACCTGGTCCTCCTGGCGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACACGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp CGTGTGTCCAGCAGGGCAGGTGCCCCGAATGGAGACCAGGGCTTGTaGAAAGGGGCCGCTTCCCAGGGCTTCAGCCAGTGCGTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RVSSRAGAPNGDQGL*KGAASQGFSQCVPS
Trigger: AGAGGGCACGCACTGGCTGAAGCCCTGGGAAGCGGCCCCTTTCCACAAGCCCTGGTCTCCATTCGGGGCACCTGCCCTGCTGGACACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp GGATCATCTCGGGCTCCGTCTGCCAGGACCTGTGTGAGCTGCATATaGTGGAGTGGAGGACCTGCCTCTCGGTGGCCCCGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GSSRAPSARTCVSCI*WSGGPASRWPRASR
Trigger: CCTGCTGGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp GCTGGGCGGAGAGCTGCCTCCAGGTTCCTGCCTCTGGCCCTGGCGTaGGGTCGACACTGGGTGTGGTGTGTGTCTCATGTCCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: AGRRAASRFLPLALA*GRHWVWCVSHVQAV
Trigger: CACTGCCTGGACATGAGACACACACCACACCCAGTGTCGACCCCACGCCAGGGCCAGAGGCAGGAACCTGGAGGCAGCTCTCCGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp AGGACAACCGGGTGTCCCTGGCGGAAGCCAAGTCCGTGTGGGCCCTaGTGCAGCGTAACGAGTTCCTGCTGCTGCTGTCCCGTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RTTGCPWRKPSPCGP*CSVTSSCCCCPVRA
Trigger: AGCCCTGACGGGACAGCAGCAGCAGGAACTCGTTACGCTGCAGCAGGGCCCACACGGACTTGGCTTCCGCCAGGGACACCCGGTTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp CTCCACCCGTGTAGCTGTGGGCTGGGACCCCTAACCTGGCAGATGTaGTGGTCTGGCCGGCAGACCACCCCGCCAGGAGGACCAGGTAAA +
Preference number: 5 (lower is better)
Translates to: LHPCSCGLGPLTWQM*WSGRQTTPPGGPGK
Trigger: TTTACCTGGTCCTCCTGGCGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACACGGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp TGCCCTGTGCCGATTCTCATCCTCAGGGAAGCTCTGAGGCTTCTCTaGCCAGGTGCCCACCCCCGAGCTCCCCAGGTGCACCCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: CPVPILILREALRLL*PGAHPRAPQVHPRL
Trigger: CAGCCTTGGGTGCACCTGGGGAGCTCGGGGGTGGGCACCTGGGCAGAGAAGCCTCAGAGCTTCCCTGAGGATGAGAATCGGCACAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp TCCACACCACGGTCATATGCCCAGCAGGCGGCCCTGGCACCAACATaGCCAGCGCAAAGGCACAGATGGGCCCAAGTGGACCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: STPRSYAQQAALAPT*PAQRHRWAQVDPGQ
Trigger: CTGCCCAGGGTCCACTTGGGCCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGCCGCCTGCTGGGCATATGACCGTGGTGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp CAGGGCAGGAGTCCACACCACGGTCATATGCCCAGCAGGCGGCCCTaGCACCAACATGCCCAGCGCAAAGGCACAGATGGGCCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: QGRSPHHGHMPSRRP*HQHAQRKGTDGPKW
Trigger: CCACTTGGGCCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGCCGCCTGCTGGGCATATGACCGTGGTGTGGACTCCTGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp ACTGCCCGTGCAGTGGGAGGGGGATGTCTGCACGGAGGACCTCTGTaGCCCTGTCCAGGTGTACAGCGGGCTCTGGCGGGACAAGGATGT +
Preference number: 5 (lower is better)
Translates to: TARAVGGGCLHGGPL*PCPGVQRALAGQGC
Trigger: ACATCCTTGTCCCGCCAGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 90 bp CGGGAGGTCTGTCTGGCAGCAGCCACACAGGCCAGCAGAGTGAGCTaGCACATTGCTGGCTGCGTCCTCCACCCGTGTAGCTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: REVCLAAATQASRVS*HIAGCVLHPCSCGL
Trigger: CAGCCCACAGCTACACGGGTGGAGGACGCAGCCAGCAATGTGTCAGCTCACTCTGCTGGCCTGTGTGGCTGCTGCCAGACAGACCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 90 bp GGAGGCGGGAGGTCTGTCTGGCAGCAGCCACACAGGCCAGCAGAGTaGGCTGACACATTGCTGGCTGCGTCCTCCACCCGTGTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GGGRSVWQQPHRPAE*ADTLLAASSTRVAV
Trigger: CACAGCTACACGGGTGGAGGACGCAGCCAGCAATGTGTCAGCTCACTCTGCTGGCCTGTGTGGCTGCTGCCAGACAGACCTCCCGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 90 bp GTACCGCAAGGGGATCATCTCGGGCTCCGTCTGCCAGGACCTGTGTaGGCTGCATATGGTGGAGTGGAGGACCTGCCTCTCGGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: VPQGDHLGLRLPGPV*AAYGGVEDLPLGGP
Trigger: GGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCCTTGCGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp TCATCTCGGGCTCCGTCTGCCAGGACCTGTGTGAGCTGCATATGGTaGAGTGGAGGACCTGCCTCTCGGTGGCCCCGGGCCAGCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SSRAPSARTCVSCIW*SGGPASRWPRASRY
Trigger: ATACCTGCTGGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 90 bp GCTGCTGCTGTCCCGTCAGGGCTCTGGATTCCAGCACCACAGACATaGGACCCCAGCTCGGAGCAAAGGCGGACATGGACATCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: AAAVPSGLWIPAPQT*DPSSEQRRTWTSRQ
Trigger: CTGCCGGGATGTCCATGTCCGCCTTTGCTCCGAGCTGGGGTCTCATGTCTGTGGTGCTGGAATCCAGAGCCCTGACGGGACAGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp GTGGAAAGGGGCCGCTTCCCAGGGCTTCAGCCAGTGCGTGCCCTCTaGCCTGTGCCGATTCTCATCCTCAGGGAAGCTCTGAGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VERGRFPGLQPVRAL*PVPILILREALRLL
Trigger: GAGAAGCCTCAGAGCTTCCCTGAGGATGAGAATCGGCACAGGGCAGAGGGCACGCACTGGCTGAAGCCCTGGGAAGCGGCCCCTTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp CTTTTGGTCCCAAACGCCAGGCGAACCTGGGAGACCTGCCTTCCCTaGCGGCGCTGGTTGGCCAGGTCCTGCTCATGGCTGACTTCAACA +
Preference number: 5 (lower is better)
Translates to: LLVPNARRTWETCLP*RRWLARSCSWLTST
Trigger: TGTTGAAGTCAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGGGACCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp AGTGTGAATTCTAGTTCACCGGCCAATGCCTGGATGGTCCAGAGCTaGGTCGGCTGGGCGGAGAGCTGCCTCCAGGTTCCTGCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SVNSSSPANAWMVQS*VGWAESCLQVPASG
Trigger: GCCAGAGGCAGGAACCTGGAGGCAGCTCTCCGCCCAGCCGACCCAGCTCTGGACCATCCAGGCATTGGCCGGTGAACTAGAATTCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp TTTTCCTTTCTTTTGGTCCCAAACGCCAGGCGAACCTGGGAGACCTaGCTTCCCTGCCGGCGCTGGTTGGCCAGGTCCTGCTCATGGCTG +
Preference number: 5 (lower is better)
Translates to: FSFLLVPNARRTWET*LPCRRWLARSCSWL
Trigger: CAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGGGACCAAAAGAAAGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp CCTCAGTGTGACCAGTACCGCAAGGGGATCATCTCGGGCTCCGTCTaGCAGGACCTGTGTGAGCTGCATATGGTGGAGTGGAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: PQCDQYRKGIISGSV*QDLCELHMVEWRTC
Trigger: GCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCCTTGCGGTACTGGTCACACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 90 bp TGCACGGAGGACCTCTGTGGCCCTGTCCAGGTGTACAGCGGGCTCTaGCGGGACAAGGATGTAACCATCAAGTGTGGCATTGAGGAGACC +
Preference number: 5 (lower is better)
Translates to: CTEDLCGPVQVYSGL*RDKDVTIKCGIEET
Trigger: GGTCTCCTCAATGCCACACTTGATGGTTACATCCTTGTCCCGCCAGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCCGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 90 bp GACATTTGGGCCACATCACTCTTCACTACGGGGCGTCCCAGGCACTaGAGGACATGCAGCTGCGTCTTTGGCCTCTGTACCCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: DIWATSLFTTGRPRH*RTCSCVFGLCTPIA
Trigger: AGCAATGGGGGTACAGAGGCCAAAGACGCAGCTGCATGTCCTGCAGTGCCTGGGACGCCCCGTAGTGAAGAGTGATGTGGCCCAAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS GCA 90 bp GCCACATCACTCTTCACTACGGGGCGTCCCAGGCACTGCAGGACATaGAGCTGCGTCTTTGGCCTCTGTACCCCCATTGCTACCCATTTT +
Preference number: 5 (lower is better)
Translates to: ATSLFTTGRPRHCRT*SCVFGLCTPIATHF
Trigger: AAAATGGGTAGCAATGGGGGTACAGAGGCCAAAGACGCAGCTGCATGTCCTGCAGTGCCTGGGACGCCCCGTAGTGAAGAGTGATGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS CCA 90 bp TTTGGGGAGAGGATTCCTGTTTCCAAAGTGACCCAGACACATCTCTaGGCAAGGCAGCTCCTGACCCCTACCCAGGGCCCTTCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: FGERIPVSKVTQTHL*ARQLLTPTQGPSFV
Trigger: CACAAAGGAAGGGCCCTGGGTAGGGGTCAGGAGCTGCCTTGCCCAGAGATGTGTCTGGGTCACTTTGGAAACAGGAATCCTCTCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS CCA 90 bp ATGCAGCTGCGTCTTTGGCCTCTGTACCCCCATTGCTACCCATTTTaGGGAGAGGATTCCTGTTTCCAAAGTGACCCAGACACATCTCTG +
Preference number: 5 (lower is better)
Translates to: MQLRLWPLYPHCYPF*GEDSCFQSDPDTSL
Trigger: CAGAGATGTGTCTGGGTCACTTTGGAAACAGGAATCCTCTCCCCAAAATGGGTAGCAATGGGGGTACAGAGGCCAAAGACGCAGCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS GCA 90 bp AATGTGAACACAAGACCGACTGGTCCCTCCAGTCACTTAAGATGTTaGACAGGAGGGCTTAGTTACATTGGAGGATTGACCCTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: NVNTRPTGPSSHLRC*TGGLSYIGGLTLFQ
Trigger: CTGGAACAGGGTCAATCCTCCAATGTAACTAAGCCCTCCTGTGCAACATCTTAAGTGACTGGAGGGACCAGTCGGTCTTGTGTTCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447221.1
ENST00000663097.1
ENST00000668354.1
CDS GCA 90 bp CAAGGAACAGCCTGTTTATCCAGCTCGACTGTTCTTAATCAAACTTaGCTAAGGCCTCCCAGACAGACCTACAGAATCGTTTCCAGAACG +
Preference number: 5 (lower is better)
Translates to: QGTACLSSSTVLNQT*LRPPRQTYRIVSRT
Trigger: CGTTCTGGAAACGATTCTGTAGGTCTGTCTGGGAGGCCTTAGGCAAGTTTGATTAAGAACAGTCGAGCTGGATAAACAGGCTGTTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS CCA 72 bp GGGCGGGTGGGCCTGGGGCTGATACTGCCCGTGCAGTaGGAGGGGGATGTCTGCACGGAGGACCTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: GRVGLGLILPVQ*EGDVCTEDLCG
Trigger: GCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCACCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CAA 90 bp GGCCGTGTGTCCAGCAGGGCAGGTGCCCCGAATGGAGACCAGGGCTaGTGGAAAGGGGCCGCTTCCCAGGGCTTCAGCCAGTGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: GRVSSRAGAPNGDQG*WKGAASQGFSQCVP
Trigger: GGGCACGCACTGGCTGAAGCCCTGGGAAGCGGCCCCTTTCCACAAGCCCTGGTCTCCATTCGGGGCACCTGCCCTGCTGGACACACGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp GGCCTTTGCTGTGCCGTCCTGTTACAGGAGCCAGGATaGTGGGGACGGGACCGGACCGGAGGGTTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: GLCCAVLLQEPG*WGRDRTGGLAG
Trigger: CCCCGCCAACCCTCCGGTCCGGTCCCGTCCCCACCATCCTGGCTCCTGTAACAGGACGGCACAGCAAAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 72 bp GCCCCGCCCGGCACGCCTGCACCTGTCTCCTCAGTGTaGCCAGTACCGCAAGGGGATCATCTCGGGCTCCGT +
Preference number: 6 (lower is better)
Translates to: APPGTPAPVSSV*PVPQGDHLGLR
Trigger: ACGGAGCCCGAGATGATCCCCTTGCGGTACTGGTCACACTGAGGAGACAGGTGCAGGCGTGCCGGGCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp CCAAACGCCAGGCGAACCTGGGAGACCTGCCTTCCCTaGCGGCGCTGGTTGGCCAGGTCCTGCTCATGGCTG +
Preference number: 6 (lower is better)
Translates to: PNARRTWETCLP*RRWLARSCSWL
Trigger: CAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp GCTGGCAGCTTTCCAACTGCAGCAAGTGGAGGCCCCTaGCAGCTTCGGGCCTGTGGGCAGGGGCTCAGTGGG +
Preference number: 6 (lower is better)
Translates to: AGSFPTAASGGP*QLRACGQGLSG
Trigger: CCCACTGAGCCCCTGCCCACAGGCCCGAAGCTGGCAGGGGCCTCCACTTGCTGCAGTTGGAAAGCTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp CTCCACCCGTGTAGCTGTGGGCTGGGACCCCTAACCTaGCAGATGTGCTGGTCTGGCCGGCAGACCACCCCG +
Preference number: 6 (lower is better)
Translates to: LHPCSCGLGPLT*QMCWSGRQTTP
Trigger: CGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACACGGGTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp GCAGTGGGAGGGGGATGTCTGCACGGAGGACCTCTGTaGCCCTGTCCAGGTGTACAGCGGGCTCTGGCGGGA +
Preference number: 6 (lower is better)
Translates to: AVGGGCLHGGPL*PCPGVQRALAG
Trigger: TCCCGCCAGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp GCTCCGTCTGCCAGGACCTGTGTGAGCTGCATATGGTaGAGTGGAGGACCTGCCTCTCGGTGGCCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: APSARTCVSCIW*SGGPASRWPRA
Trigger: GGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp CGGGCTCCGTCTGCCAGGACCTGTGTGAGCTGCATATaGTGGAGTGGAGGACCTGCCTCTCGGTGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RAPSARTCVSCI*WSGGPASRWPR
Trigger: CCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp CTTTGCTGTGCCGTCCTGTTACAGGAGCCAGGATGGTaGGGACGGGACCGGACCGGAGGGTTGGCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LCCAVLLQEPGW*GRDRTGGLAGL
Trigger: CAGCCCCGCCAACCCTCCGGTCCGGTCCCGTCCCCACCATCCTGGCTCCTGTAACAGGACGGCACAGCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 72 bp AGGTATAGCCACTGGCAGGGCGGGTGGGCCTGGGGCTaGTACTGCCCGTGCAGTGGGAGGGGGATGTCTGCA +
Preference number: 6 (lower is better)
Translates to: RYSHWQGGWAWG*YCPCSGRGMSA
Trigger: TGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCACCCGCCCTGCCAGTGGCTATACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp GGGTGTCCCTGGCGGAAGCCAAGTCCGTGTGGGCCCTaGTGCAGCGTAACGAGTTCCTGCTGCTGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: GCPWRKPSPCGP*CSVTSSCCCCP
Trigger: GGGACAGCAGCAGCAGGAACTCGTTACGCTGCAGCAGGGCCCACACGGACTTGGCTTCCGCCAGGGACACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp CTTTTGGTCCCAAACGCCAGGCGAACCTGGGAGACCTaGCTTCCCTGCCGGCGCTGGTTGGCCAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LLVPNARRTWET*LPCRRWLARSC
Trigger: GCAGGACCTGGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGGGACCAAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp TGTAGCTGTGGGCTGGGACCCCTAACCTGGCAGATGTaGTGGTCTGGCCGGCAGACCACCCCGCCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: CSCGLGPLTWQM*WSGRQTTPPGG
Trigger: TCCTCCTGGCGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp GGCACTGCCTGTGTGAGGGGCTGGCAGCTTTCCAACTaGAGCAAGTGGAGGCCCCTGCCAGCTTCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GTACVRGWQLSN*SKWRPLPASGL
Trigger: CAGGCCCGAAGCTGGCAGGGGCCTCCACTTGCTGCAGTTGGAAAGCTGCCAGCCCCTCACACAGGCAGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp GCCCTGGCACCAACATGCCCAGCGCAAAGGCACAGATaGGCCCAAGTGGACCCTGGGCAGACCTCCCATCCC +
Preference number: 6 (lower is better)
Translates to: ALAPTCPAQRHR*AQVDPGQTSHP
Trigger: GGGATGGGAGGTCTGCCCAGGGTCCACTTGGGCCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 72 bp CCTGCCGGCGCTGGTTGGCCAGGTCCTGCTCATGGCTaGCTTCAACAAGGACAACCGGGTGTCCCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: PAGAGWPGPAHG*LQQGQPGVPGG
Trigger: TCCGCCAGGGACACCCGGTTGTCCTTGTTGAAGTCAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp GGAAAGGGGCCGCTTCCCAGGGCTTCAGCCAGTGCGTaGCCTCTGCCCTGTGCCGATTCTCATCCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GKGPLPRASASA*PLPCADSHPQG
Trigger: TCCCTGAGGATGAGAATCGGCACAGGGCAGAGGGCACGCACTGGCTGAAGCCCTGGGAAGCGGCCCCTTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp AGTCCGTGTGGGCCCTGCTGCAGCGTAACGAGTTCCTaGTGCTGCTGTCCCGTCAGGGCTCTGGATTCCAGC +
Preference number: 6 (lower is better)
Translates to: SPCGPCCSVTSS*CCCPVRALDSS
Trigger: GCTGGAATCCAGAGCCCTGACGGGACAGCAGCAGCAGGAACTCGTTACGCTGCAGCAGGGCCCACACGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp CTTCCCTGCCGGCGCTGGTTGGCCAGGTCCTGCTCATaGCTGACTTCAACAAGGACAACCGGGTGTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LPCRRWLARSCS*LTSTRTTGCPW
Trigger: CCAGGGACACCCGGTTGTCCTTGTTGAAGTCAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp AGTCCACACCACGGTCATATGCCCAGCAGGCGGCCCTaGCACCAACATGCCCAGCGCAAAGGCACAGATGGG +
Preference number: 6 (lower is better)
Translates to: SPHHGHMPSRRP*HQHAQRKGTDG
Trigger: CCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGCCGCCTGCTGGGCATATGACCGTGGTGTGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp CTGCCTCTGGCCCTGGCGTGGGGTCGACACTGGGTGTaGTGTGTGTCTCATGTCCAGGCAGTGGCCTTTGCT +
Preference number: 6 (lower is better)
Translates to: LPLALAWGRHWV*CVSHVQAVAFA
Trigger: AGCAAAGGCCACTGCCTGGACATGAGACACACACCACACCCAGTGTCGACCCCACGCCAGGGCCAGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS TCA 72 bp GGGGATCATCTCGGGCTCCGTCTGCCAGGACCTGTGTaGGCTGCATATGGTGGAGTGGAGGACCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: GDHLGLRLPGPV*AAYGGVEDLPL
Trigger: GAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp TCATCTCGGGCTCCGTCTGCCAGGACCTGTGTGAGCTaGATATGGTGGAGTGGAGGACCTGCCTCTCGGTGG +
Preference number: 6 (lower is better)
Translates to: SSRAPSARTCVS*IWWSGGPASRW
Trigger: CCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp GACCAGTACCGCAAGGGGATCATCTCGGGCTCCGTCTaGCAGGACCTGTGTGAGCTGCATATGGTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: DQYRKGIISGSV*QDLCELHMVEW
Trigger: CCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCCTTGCGGTACTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp ACTACGGGGCGTCCCAGGCACTGCAGGACATGCAGCTaGGTCTTTGGCCTCTGTACCCCCATTGCTACCCAT +
Preference number: 6 (lower is better)
Translates to: TTGRPRHCRTCS*VFGLCTPIATH
Trigger: ATGGGTAGCAATGGGGGTACAGAGGCCAAAGACGCAGCTGCATGTCCTGCAGTGCCTGGGACGCCCCGTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS GCA 72 bp GCCACATCACTCTTCACTACGGGGCGTCCCAGGCACTaGAGGACATGCAGCTGCGTCTTTGGCCTCTGTACC +
Preference number: 6 (lower is better)
Translates to: ATSLFTTGRPRH*RTCSCVFGLCT
Trigger: GGTACAGAGGCCAAAGACGCAGCTGCATGTCCTGCAGTGCCTGGGACGCCCCGTAGTGAAGAGTGATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS CCA 72 bp TTTTCCTTTCTTTTGGTCCCAAACGCCAGGCGAACCTaGGAGACCTGCCTTCCCTGCCGGCGCTGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: FSFLLVPNARRT*ETCLPCRRWLA
Trigger: GGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGGGACCAAAAGAAAGGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CAA 72 bp GGCGTCCCAGGCACTGCAGGACATGCAGCTGCGTCTTaGGCCTCTGTACCCCCATTGCTACCCATTTTGGGG +
Preference number: 6 (lower is better)
Translates to: GVPGTAGHAAAS*ASVPPLLPILG
Trigger: CCCCAAAATGGGTAGCAATGGGGGTACAGAGGCCAAAGACGCAGCTGCATGTCCTGCAGTGCCTGGGACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS TCA 72 bp CTGGCGGGACAAGGATGTAACCATCAAGTGTGGCATTaGGGAGACCCTCGACTCCAAGGCCCGGTCGGATGC +
Preference number: 6 (lower is better)
Translates to: LAGQGCNHQVWH*GDPRLQGPVGC
Trigger: GCATCCGACCGGGCCTTGGAGTCGAGGGTCTCCTCAATGCCACACTTGATGGTTACATCCTTGTCCCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp GGTGTGGTGTGTGTCTCATGTCCAGGCAGTGGCCTTTaGTGTGCCGTCCTGTTACAGGAGCCAGGATGGTGG +
Preference number: 6 (lower is better)
Translates to: GVVCVSCPGSGL*CAVLLQEPGWW
Trigger: CCACCATCCTGGCTCCTGTAACAGGACGGCACAGCAAAGGCCACTGCCTGGACATGAGACACACACCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS CCA 72 bp GACCTCTGTGGCCCTGTCCAGGTGTACAGCGGGCTCTaGCGGGACAAGGATGTAACCATCAAGTGTGGCATT +
Preference number: 6 (lower is better)
Translates to: DLCGPVQVYSGL*RDKDVTIKCGI
Trigger: AATGCCACACTTGATGGTTACATCCTTGTCCCGCCAGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414282.5
CDS GCA 72 bp TCCCACCACAGCAACACCTTTCTTCAGGGCGGGCTCTaGTCCGCAATGTGTGAGTCAAGACAATCCATTCCA +
Preference number: 6 (lower is better)
Translates to: SHHSNTFLQGGL*SAMCESRQSIP
Trigger: TGGAATGGATTGTCTTGACTCACACATTGCGGAGCAGAGCCCGCCCTGAAGAAAGGTGTTGCTGTGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000436596.2
ENST00000653276.1
ENST00000663097.1
CDS CCA 72 bp CGTCTTTGGCCTCTGTACCCCCATTGCTACCCATTTTaGGGAGAGGATTCCTGTTTCCAAAGTGACCCAGAC +
Preference number: 6 (lower is better)
Translates to: RLWPLYPHCYPF*GEDSCFQSDPD
Trigger: GTCTGGGTCACTTTGGAAACAGGAATCCTCTCCCCAAAATGGGTAGCAATGGGGGTACAGAGGCCAAAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS GCA 72 bp AGTTACATTGGAGGATTGACCCTGTTCCAGCTCCAATaGACCAACTTACCCAACACCCCACGCACGTGTCAT +
Preference number: 6 (lower is better)
Translates to: SYIGGLTLFQLQ*TNLPNTPRTCH
Trigger: ATGACACGTGCGTGGGGTGTTGGGTAAGTTGGTGCATTGGAGCTGGAACAGGGTCAATCCTCCAATGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447221.1
ENST00000663097.1
ENST00000668354.1
CDS GCA 72 bp ACAAGACCGACTGGTCCCTCCAGTCACTTAAGATGTTaGACAGGAGGGCTTAGTTACATTGGAGGATTGACC +
Preference number: 6 (lower is better)
Translates to: TRPTGPSSHLRC*TGGLSYIGGLT
Trigger: GGTCAATCCTCCAATGTAACTAAGCCCTCCTGTGCAACATCTTAAGTGACTGGAGGGACCAGTCGGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447221.1
ENST00000663097.1
ENST00000668354.1
CDS GCA 72 bp GCCTGTTTATCCAGCTCGACTGTTCTTAATCAAACTTaGCTAAGGCCTCCCAGACAGACCTACAGAATCGTT +
Preference number: 6 (lower is better)
Translates to: ACLSSSTVLNQT*LRPPRQTYRIV
Trigger: AACGATTCTGTAGGTCTGTCTGGGAGGCCTTAGGCAAGTTTGATTAAGAACAGTCGAGCTGGATAAACAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447221.1
CDS CCA 72 bp AAGGTGGTTTCCAAAAGCGAAAATCCAAATGCTGCCTaGCTTTGGTTGCAAGTAATGTCAGGCCATAAACCA +
Preference number: 6 (lower is better)
Translates to: KVVSKSENPNAA*LWLQVMSGHKP
Trigger: TGGTTTATGGCCTGACATTACTTGCAACCAAAGCCAGGCAGCATTTGGATTTTCGCTTTTGGAAACCACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447221.1