Pregenerated sensors for SNHG6 (Homo sapiens)

Ensembl gene IDs: ENSG00000245910

Ensembl transcript IDs: ENST00000520348.5, ENST00000520619.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TTTTTCTCATTGTATTATAGAATCCTGACTGCAAAGCACTGGGCTTaGTGCTGGAGCAGAAAGGCTTATGATCTTGTTGCCAGAAAGAAT	+
Preference number: 5 (lower is better) Translates to: FFSLYYRILTAKHWA*CWSRKAYDLVARKN Trigger: ATTCTTTCTGGCAACAAGATCATAAGCCTTTCTGCTCCAGCATCAAGCCCAGTGCTTTGCAGTCAGGATTCTATAATACAATGAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520619.1
CDS TCA 72 bp	TTGTATTATAGAATCCTGACTGCAAAGCACTGGGCTTaGTGCTGGAGCAGAAAGGCTTATGATCTTGTTGCC	+
Preference number: 6 (lower is better) Translates to: LYYRILTAKHWA*CWSRKAYDLVA Trigger: GGCAACAAGATCATAAGCCTTTCTGCTCCAGCATCAAGCCCAGTGCTTTGCAGTCAGGATTCTATAATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520619.1
CDS TCA 72 bp	AGGTACAAGCAATGTCTCCCCAGCTGTCAGCCTCAATaGGAATCACCACCCATAAATAAGCTAATTATTGAC	+
Preference number: 6 (lower is better) Translates to: RYKQCLPSCQPQ*ESPPINKLIID Trigger: GTCAATAATTAGCTTATTTATGGGTGGTGATTCTCATTGAGGCTGACAGCTGGGGAGACATTGCTTGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520348.5
CDS TCA 72 bp	TATTACTTCTGTTTTTCTCATTGTATTATAGAATCCTaGCTGCAAAGCACTGGGCTTGATGCTGGAGCAGAA	+
Preference number: 6 (lower is better) Translates to: YYFCFSHCIIES*LQSTGLDAGAE Trigger: TTCTGCTCCAGCATCAAGCCCAGTGCTTTGCAGTCAGGATTCTATAATACAATGAGAAAAACAGAAGTAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520619.1

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