Pregenerated sensors for SNHG5 (Homo sapiens)
Ensembl gene IDs: ENSG00000203875Ensembl transcript IDs: ENST00000369605.9, ENST00000420199.6, ENST00000427501.6, ENST00000428833.6, ENST00000431043.2, ENST00000435947.6, ENST00000453754.5, ENST00000587692.6, ENST00000589187.5, ENST00000623163.4, ENST00000623267.3, ENST00000623650.4, ENST00000623901.4, ENST00000623910.4, ENST00000624128.2, ENST00000624295.3, ENST00000650155.1, ENST00000652832.1, ENST00000654795.1, ENST00000655116.1, ENST00000655834.1, ENST00000655847.1, ENST00000655881.1, ENST00000656092.1, ENST00000656441.1, ENST00000657203.1, ENST00000657339.1, ENST00000657398.1, ENST00000658077.1, ENST00000658383.1, ENST00000658584.1, ENST00000658742.1, ENST00000658836.1, ENST00000658871.1, ENST00000658919.1, ENST00000659276.1, ENST00000659484.1, ENST00000659725.1, ENST00000660318.1, ENST00000660580.1, ENST00000661011.1, ENST00000661360.1, ENST00000661487.1, ENST00000662245.1, ENST00000662914.1, ENST00000663073.1, ENST00000663448.1, ENST00000664449.1, ENST00000665041.1, ENST00000665113.1, ENST00000665270.1, ENST00000666607.1, ENST00000666667.1, ENST00000666912.1, ENST00000667289.1, ENST00000667622.1, ENST00000667693.1, ENST00000668100.1, ENST00000668505.1, ENST00000668512.1, ENST00000669413.1, ENST00000669824.1, ENST00000670094.1, ENST00000670327.1, ENST00000670410.1, ENST00000671327.1, ENST00000673634.1, ENST00000673640.1, ENST00000673721.1, ENST00000673729.1, ENST00000673769.1, ENST00000674091.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCGCCGCTCAGGCACATGCCGGAGGCCAGCAAGTTCGGCGCCCGTaGCCGATCAGCGGTTCCTCACGCCAAAACTCGGAGCCTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: AAAQAHAGGQQVRRP*PISGSSRQNSEPVA Trigger: GGCCACAGGCTCCGAGTTTTGGCGTGAGGAACCGCTGATCGGCCACGGGCGCCGAACTTGCTGGCCTCCGGCATGTGCCTGAGCGGCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000453754.5 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS GCA 90 bp | CCTCCGCCCCAATTAAGGTGGTTTTTCCGCCGCCGCTCAGGCACATaGCGGAGGCCAGCAAGTTCGGCGCCCGTGGCCGATCAGCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PPPQLRWFFRRRSGT*RRPASSAPVADQRF Trigger: GAACCGCTGATCGGCCACGGGCGCCGAACTTGCTGGCCTCCGGCATGTGCCTGAGCGGCGGCGGAAAAACCACCTTAATTGGGGCGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000453754.5 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS CCA 90 bp | GCCCGTGGCCGATCAGCGGTTCCTCACGCCAAAACTCGGAGCCTGTaGCCGTCACGACTCAACCTCAGTACATGTGGCAGTCCGGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: ARGRSAVPHAKTRSL*PSRLNLSTCGSPAA Trigger: TGCGGCCGGACTGCCACATGTACTGAGGTTGAGTCGTGACGGCCACAGGCTCCGAGTTTTGGCGTGAGGAACCGCTGATCGGCCACGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000453754.5 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS CCA 90 bp | CAAAACTCGGAGCCTGTGGCCGTCACGACTCAACCTCAGTACATGTaGCAGTCCGGCCGCACGTTTCCCACGTGCAAGCTTTCAACTCTC | + |
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Preference number: 5 (lower is better) Translates to: QNSEPVAVTTQPQYM*QSGRTFPTCKLSTL Trigger: GAGAGTTGAAAGCTTGCACGTGGGAAACGTGCGGCCGGACTGCCACATGTACTGAGGTTGAGTCGTGACGGCCACAGGCTCCGAGTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667622.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS GCA 90 bp | CTTCACAGGATTAAAGCTCTTAACTCGGCCTGCGCCACCATCTTTTaGTCGGATACTAGCCCGCAATACCCACTCACCTACCACCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: LHRIKALNSACATIF*SDTSPQYPLTYHPP Trigger: GGGCGGGTGGTAGGTGAGTGGGTATTGCGGGCTAGTATCCGAGCAAAAGATGGTGGCGCAGGCCGAGTTAAGAGCTTTAATCCTGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667622.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS GCA 90 bp | AGGGAGCAGCCTAGGCTGTCTTACTCTGCAACACCCACTCATCCTTaGCTTGCCACAACTAATTGGACCAGCATCTGGCACCAGAAGATT | + |
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Preference number: 5 (lower is better) Translates to: REQPRLSYSATPTHP*LATTNWTSIWHQKI Trigger: AATCTTCTGGTGCCAGATGCTGGTCCAATTAGTTGTGGCAAGGCAAGGATGAGTGGGTGTTGCAGAGTAAGACAGCCTAGGCTGCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655847.1 |
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| CDS GCA 90 bp | ACTCAACCTCAGTACATGTGGCAGTCCGGCCGCACGTTTCCCACGTaGAAGCTTTCAACTCTCAGCACTCTAAACTCTTCACTAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: TQPQYMWQSGRTFPT*KLSTLSTLNSSLRC Trigger: ACATCTTAGTGAAGAGTTTAGAGTGCTGAGAGTTGAAAGCTTGCACGTGGGAAACGTGCGGCCGGACTGCCACATGTACTGAGGTTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667622.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS GCA 90 bp | TCTTCACTAAGATGTCTTCACAGGATTAAAGCTCTTAACTCGGCCTaGGCCACCATCTTTTGCTCGGATACTAGCCCGCAATACCCACTC | + |
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Preference number: 5 (lower is better) Translates to: SSLRCLHRIKALNSA*ATIFCSDTSPQYPL Trigger: GAGTGGGTATTGCGGGCTAGTATCCGAGCAAAAGATGGTGGCGCAGGCCGAGTTAAGAGCTTTAATCCTGTGAAGACATCTTAGTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667622.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS CCA 90 bp | CTGAACTGTAAGATATATAAAAATAGCTGTGGGTCTCAGTTCCTCTaGGAAGGTAAGAGCCTAACTCTGGTGGGCAAGTGGGCACCTTGC | + |
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Preference number: 5 (lower is better) Translates to: LNCKIYKNSCGSQFL*EGKSLTLVGKWAPC Trigger: GCAAGGTGCCCACTTGCCCACCAGAGTTAGGCTCTTACCTTCCCAGAGGAACTGAGACCCACAGCTATTTTTATATATCTTACAGTTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000673634.1 ENST00000673640.1 ENST00000673729.1 ENST00000673769.1 |
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| CDS GCA 90 bp | GCATGTTACCACACCCAGTTTTACTTATTTATAGAGATGACAACTTaGTGTTTCCAGGCTGGTCTCTTCCTGGGCTCAAGCAGAGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ACYHTQFYLFIEMTT*CFQAGLFLGSSRVL Trigger: CAGCACTCTGCTTGAGCCCAGGAAGAGACCAGCCTGGAAACAGCAAGTTGTCATCTCTATAAATAAGTAAAACTGGGTGTGGTAACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CCA 90 bp | CCAGTTTTACTTATTTATAGAGATGACAACTTGCTGTTTCCAGGCTaGTCTCTTCCTGGGCTCAAGCAGAGTGCTGGGATTACAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: PVLLIYRDDNLLFPG*SLPGLKQSAGITGM Trigger: CATGCCTGTAATCCCAGCACTCTGCTTGAGCCCAGGAAGAGACCAGCCTGGAAACAGCAAGTTGTCATCTCTATAAATAAGTAAAACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS TCA 90 bp | AGACCAGGACTCATGAGAGTAAGACAAGGAGTCTGGTTCTCATACTaGAAATGTATCCTCTTCTGCCCCAAGATGCTCTCTACAAGATGT | + |
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Preference number: 5 (lower is better) Translates to: RPGLMRVRQGVWFSY*KCILFCPKMLSTRC Trigger: ACATCTTGTAGAGAGCATCTTGGGGCAGAAGAGGATACATTTTCAGTATGAGAACCAGACTCCTTGTCTTACTCTCATGAGTCCTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 90 bp | AGCTTGGGATTACAAGGTCAATACAGTAATTTGAGCACTTTTACTTaGATCCTCAGTACTCTTGGCCCATTATTCCTCTGCTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SLGLQGQYSNLSTFT*ILSTLGPLFLCSSW Trigger: CCAGGAGGAGCAGAGGAATAATGGGCCAAGAGTACTGAGGATGCAAGTAAAAGTGCTCAAATTACTGTATTGACCTTGTAATCCCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS CCA 90 bp | GCATCTTGTGCCACTGTTGACAAAACGGTTTTATTTCAGGAGTCTTaGCAGAGCCTAGCACAAGCCAGTGCATATAAATGTGGAGTACTA | + |
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Preference number: 5 (lower is better) Translates to: ASCATVDKTVLFQES*QSLAQASAYKCGVL Trigger: TAGTACTCCACATTTATATGCACTGGCTTGTGCTAGGCTCTGCCAAGACTCCTGAAATAAAACCGTTTTGTCAACAGTGGCACAAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654795.1 ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CCA 90 bp | CTCTTCTGCCCCAAGATGCTCTCTACAAGATGTTACTCTACAGGATaGAGTAAGATCAGAGGCAGTGGCAATATTCAGACAGTTAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LFCPKMLSTRCYSTG*SKIRGSGNIQTVKS Trigger: TGACTTAACTGTCTGAATATTGCCACTGCCTCTGATCTTACTCCATCCTGTAGAGTAACATCTTGTAGAGAGCATCTTGGGGCAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS TCA 90 bp | TTCCTTCCCCGATCAGCTTGGGATTACAAGGTCAATACAGTAATTTaGGCACTTTTACTTGCATCCTCAGTACTCTTGGCCCATTATTCC | + |
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Preference number: 5 (lower is better) Translates to: FLPRSAWDYKVNTVI*ALLLASSVLLAHYS Trigger: GGAATAATGGGCCAAGAGTACTGAGGATGCAAGTAAAAGTGCTCAAATTACTGTATTGACCTTGTAATCCCAAGCTGATCGGGGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 90 bp | GAGTCTGGTTCTCATACTGAAAATGTATCCTCTTCTGCCCCAAGATaGTCTCTACAAGATGTTACTCTACAGGATGGAGTAAGATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ESGSHTENVSSSAPR*SLQDVTLQDGVRSE Trigger: CTCTGATCTTACTCCATCCTGTAGAGTAACATCTTGTAGAGAGCATCTTGGGGCAGAAGAGGATACATTTTCAGTATGAGAACCAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 90 bp | ATTGTCCTAGGCACCAAGTTTAAACAGAGATTAAAGGGAAGTCTCTaGTTTAGAAGAACTGACACTCCAGGTCCAGAAGGGAGAAACCAA | + |
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Preference number: 5 (lower is better) Translates to: IVLGTKFKQRLKGSL*FRRTDTPGPEGRNQ Trigger: TTGGTTTCTCCCTTCTGGACCTGGAGTGTCAGTTCTTCTAAAGCAGAGACTTCCCTTTAATCTCTGTTTAAACTTGGTGCCTAGGACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS TCA 90 bp | ATCCACCCTGTTGGTACCCAAATCCTCAATATTTGTCTCAGACTCTaGACCATACTGTCTTTGCTCAGTTATTTCTTAGGCCTATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: IHPVGTQILNICLRL*TILSLLSYFLGLLS Trigger: GGACAATAGGCCTAAGAAATAACTGAGCAAAGACAGTATGGTTCAGAGTCTGAGACAAATATTGAGGATTTGGGTACCAACAGGGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS TCA 90 bp | TGCGTCCTGATTTTTGTCCCTTGGCACAAATTATTCTCTAGGATTTaGATAAACCTGGAATGTCCTAATCCTGAAAGGCCACAGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: CVLIFVPWHKLFSRI*INLECPNPERPQGS Trigger: TGAACCCTGTGGCCTTTCAGGATTAGGACATTCCAGGTTTATTCAAATCCTAGAGAATAATTTGTGCCAAGGGACAAAAATCAGGACGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS CCA 90 bp | AAGCACCAAATGGTAGGTTTGAGCTTACTGTATTTTAAGATTACCTaGAAGCCTGGTGTAAGGCAGAGGAAAAATTCCTGTTGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KHQMVGLSLLYFKIT*KPGVRQRKNSCWLK Trigger: CTTCAGCCAACAGGAATTTTTCCTCTGCCTTACACCAGGCTTCCAGGTAATCTTAAAATACAGTAAGCTCAAACCTACCATTTGGTGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 90 bp | GGTAAGGGCATCAGAGATCAAGGGTATAAACATAAACACAAGCAATaGTTTCAACTGCCATCTTACACACACTACCTTCATAGTGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: GKGIRDQGYKHKHKQ*FQLPSYTHYLHSEG Trigger: ACCTTCACTATGAAGGTAGTGTGTGTAAGATGGCAGTTGAAAGCATTGCTTGTGTTTATGTTTATACCCTTGATCTCTGATGCCCTTACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654795.1 ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000658919.1 ENST00000660318.1 ENST00000670094.1 |
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| CDS GCA 90 bp | CTGTCTTTGCTCAGTTATTTCTTAGGCCTATTGTCCCAACATCTGTaGTGGTTTAGACTCAAATCCACTTGTTCTATTTTCAAGAATCCT | + |
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Preference number: 5 (lower is better) Translates to: LSLLSYFLGLLSQHL*WFRLKSTCSIFKNP Trigger: AGGATTCTTGAAAATAGAACAAGTGGATTTGAGTCTAAACCAGCACAGATGTTGGGACAATAGGCCTAAGAAATAACTGAGCAAAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CCA 90 bp | TCAGCTGATACTTTATCAATGCTAGGCAAATTTATAACTTGTCCATaGTCAGCTCCATTTTCTCCCAATCTGCAGTGTCTGATGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SADTLSMLGKFITCP*SAPFSPNLQCLMKK Trigger: CTTTTTCATCAGACACTGCAGATTGGGAGAAAATGGAGCTGACCATGGACAAGTTATAAATTTGCCTAGCATTGATAAAGTATCAGCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS CCA 90 bp | TCTTTGCTCAGTTATTTCTTAGGCCTATTGTCCCAACATCTGTGCTaGTTTAGACTCAAATCCACTTGTTCTATTTTCAAGAATCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLLSYFLGLLSQHLC*FRLKSTCSIFKNPS Trigger: TGAAGGATTCTTGAAAATAGAACAAGTGGATTTGAGTCTAAACCAGCACAGATGTTGGGACAATAGGCCTAAGAAATAACTGAGCAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CCA 90 bp | AGTTTCCACATGAGTGAGAACATGTGGTGTTTAACTTTCTGTTCCTaGCTTATTTCACTTAACATAGTGTCTTCCAGTTCCATTCATGTT | + |
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Preference number: 5 (lower is better) Translates to: SFHMSENMWCLTFCS*LISLNIVSSSSIHV Trigger: AACATGAATGGAACTGGAAGACACTATGTTAAGTGAAATAAGCCAGGAACAGAAAGTTAAACACCACATGTTCTCACTCATGTGGAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673634.1 |
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| CDS TCA 90 bp | TTATTCTCTCCTGAAGATCACTTCGTCTGTTACTTTGCAAAGTCATaGTCAGACACTATCTTCAGTTTTCATGTTGACCAATGGTCTATA | + |
|
Preference number: 5 (lower is better) Translates to: LFSPEDHFVCYFAKS*SDTIFSFHVDQWSI Trigger: TATAGACCATTGGTCAACATGAAAACTGAAGATAGTGTCTGATCATGACTTTGCAAAGTAACAGACGAAGTGATCTTCAGGAGAGAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
||
| CDS TCA 90 bp | GTAAACCCAAACAATGGTTTTTATCCAGGTATTCCCATCCTAATCTaGATGGAGTTCCAGAATAAGAGCAATCTTTCGTTGTTCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: VNPNNGFYPGIPILI*MEFQNKSNLSLFRF Trigger: AAATCTGAACAACGAAAGATTGCTCTTATTCTGGAACTCCATTCAGATTAGGATGGGAATACCTGGATAAAAACCATTGTTTGGGTTTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655847.1 |
||
| CDS CCA 72 bp | CAGGCACATGCCGGAGGCCAGCAAGTTCGGCGCCCGTaGCCGATCAGCGGTTCCTCACGCCAAAACTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QAHAGGQQVRRP*PISGSSRQNSE Trigger: CTCCGAGTTTTGGCGTGAGGAACCGCTGATCGGCCACGGGCGCCGAACTTGCTGGCCTCCGGCATGTGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000453754.5 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS GCA 72 bp | CAATTAAGGTGGTTTTTCCGCCGCCGCTCAGGCACATaGCGGAGGCCAGCAAGTTCGGCGCCCGTGGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: QLRWFFRRRSGT*RRPASSAPVAD Trigger: ATCGGCCACGGGCGCCGAACTTGCTGGCCTCCGGCATGTGCCTGAGCGGCGGCGGAAAAACCACCTTAATTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000453754.5 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
||
| CDS CCA 72 bp | GTGGCACACACACAGCTCACTGCAGCGTTGACCTCCTaGACTTCTCGCGCCTCAGCCTCCCAAGTAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAHTQLTAALTS*TSRASASQVAG Trigger: CCCAGCTACTTGGGAGGCTGAGGCGCGAGAAGTCCAGGAGGTCAACGCTGCAGTGAGCTGTGTGTGTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000623650.4 ENST00000658584.1 ENST00000658742.1 ENST00000661011.1 ENST00000661487.1 ENST00000665113.1 ENST00000666667.1 ENST00000671327.1 |
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| CDS CCA 72 bp | AAGACAGCGCCATTGTTCCCTCCGCCCCAATTAAGGTaGTTTTTCCGCCGCCGCTCAGGCACATGCCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KTAPLFPPPQLR*FFRRRSGTCRR Trigger: CCTCCGGCATGTGCCTGAGCGGCGGCGGAAAAACCACCTTAATTGGGGCGGAGGGAACAATGGCGCTGTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453754.5 ENST00000669824.1 |
||
| CDS CCA 72 bp | CGATCAGCGGTTCCTCACGCCAAAACTCGGAGCCTGTaGCCGTCACGACTCAACCTCAGTACATGTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSAVPHAKTRSL*PSRLNLSTCGS Trigger: ACTGCCACATGTACTGAGGTTGAGTCGTGACGGCCACAGGCTCCGAGTTTTGGCGTGAGGAACCGCTGATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000453754.5 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
||
| CDS CCA 72 bp | AAGACAGCGCCATTGTTCGCCAAAACTCGGAGCCTGTaGCCGTCACGACTCAACCTCAGTACATGTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KTAPLFAKTRSL*PSRLNLSTCGS Trigger: ACTGCCACATGTACTGAGGTTGAGTCGTGACGGCCACAGGCTCCGAGTTTTGGCGAACAATGGCGCTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667622.1 |
||
| CDS GCA 72 bp | TATCCTCCTTCATGTTACCTGAGGGAGGAAGCAAGCTaGAGCAAGAGAAAGCAGTACCCATGTTGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPPSCYLREEAS*SKRKQYPCWPG Trigger: GCCTGGCCAACATGGGTACTGCTTTCTCTTGCTGCAGCTTGCTTCCTCCCTCAGGTAACATGAAGGAGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000589187.5 ENST00000657203.1 ENST00000659276.1 ENST00000659725.1 |
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| CDS CAA 72 bp | GGCTGTCTTACTCTGCAACACCCACTCATCCTTGCCTaGCCACAACTAATTGGACCAGCATCTGGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCLTLQHPLILA*PQLIGPASGTR Trigger: TCTGGTGCCAGATGCTGGTCCAATTAGTTGTGGCAAGGCAAGGATGAGTGGGTGTTGCAGAGTAAGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655847.1 |
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| CDS GCA 72 bp | ATTAAAGCTCTTAACTCGGCCTGCGCCACCATCTTTTaGTCGGATACTAGCCCGCAATACCCACTCACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: IKALNSACATIF*SDTSPQYPLTY Trigger: GTAGGTGAGTGGGTATTGCGGGCTAGTATCCGAGCAAAAGATGGTGGCGCAGGCCGAGTTAAGAGCTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667622.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS GCA 72 bp | AGTAGCTTAACTTCATACCTGAGGGAGGAAGCAAGCTaGAGCAAGAGAAAGCAGTACCCATGTTGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLTSYLREEAS*SKRKQYPCWPG Trigger: GCCTGGCCAACATGGGTACTGCTTTCTCTTGCTGCAGCTTGCTTCCTCCCTCAGGTATGAAGTTAAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623163.4 ENST00000673729.1 |
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| CDS GCA 72 bp | GTTACCTTAACTTCATACCTGAGGGAGGAAGCAAGCTaGAGCAAGAGAAAGCAGTACCCATGTTGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VTLTSYLREEAS*SKRKQYPCWPG Trigger: GCCTGGCCAACATGGGTACTGCTTTCTCTTGCTGCAGCTTGCTTCCTCCCTCAGGTATGAAGTTAAGGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000623901.4 ENST00000624128.2 ENST00000650155.1 ENST00000652832.1 ENST00000656441.1 ENST00000658383.1 ENST00000668100.1 ENST00000673640.1 ENST00000673721.1 |
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| CDS GCA 72 bp | CTAACCTTAACTTCATACCTGAGGGAGGAAGCAAGCTaGAGCAAGAGAAAGCAGTACCCATGTTGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LTLTSYLREEAS*SKRKQYPCWPG Trigger: GCCTGGCCAACATGGGTACTGCTTTCTCTTGCTGCAGCTTGCTTCCTCCCTCAGGTATGAAGTTAAGGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666607.1 ENST00000673769.1 |
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| CDS TCA 72 bp | AGGGCAGTGAGGATTGATGTTAGTTCACAGGACACTTaGCTGGGGAGCCAAGCACAGTGGATATTGGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAVRIDVSSQDT*LGSQAQWILGF Trigger: GAAACCCAATATCCACTGTGCTTGGCTCCCCAGTCAAGTGTCCTGTGAACTAACATCAATCCTCACTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 72 bp | AGATGTCTTCACAGGATTAAAGCTCTTAACTCGGCCTaGGCCACCATCTTTTGCTCGGATACTAGCCCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RCLHRIKALNSA*ATIFCSDTSPQ Trigger: TTGCGGGCTAGTATCCGAGCAAAAGATGGTGGCGCAGGCCGAGTTAAGAGCTTTAATCCTGTGAAGACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 50 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667622.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000669824.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS CAA 90 bp | CGCATGTTACCACACCCAGTTTTACTTATTTATAGAGATGACAACTaGCTGTTTCCAGGCTGGTCTCTTCCTGGGCTCAAGCAGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RMLPHPVLLIYRDDN*LFPGWSLPGLKQSA Trigger: AGCACTCTGCTTGAGCCCAGGAAGAGACCAGCCTGGAAACAGCAAGTTGTCATCTCTATAAATAAGTAAAACTGGGTGTGGTAACATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS GCA 72 bp | TTCCACACAAAACCCTTCCCCTTCATTAATCCGAATTaGACACAACGCCGCCTTCGAACAGCTCAGTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FHTKPFPFINPN*TQRRLRTAQFQ Trigger: TTGAAACTGAGCTGTTCGAAGGCGGCGTTGTGTGCAATTCGGATTAATGAAGGGGAAGGGTTTTGTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 51 transcripts: ENST00000369605.9 ENST00000420199.6 ENST00000428833.6 ENST00000435947.6 ENST00000587692.6 ENST00000623163.4 ENST00000623267.3 ENST00000623650.4 ENST00000623901.4 ENST00000623910.4 ENST00000624128.2 ENST00000624295.3 ENST00000652832.1 ENST00000655834.1 ENST00000655847.1 ENST00000655881.1 ENST00000656092.1 ENST00000656441.1 ENST00000657203.1 ENST00000657339.1 ENST00000657398.1 ENST00000658077.1 ENST00000658383.1 ENST00000658584.1 ENST00000658742.1 ENST00000658836.1 ENST00000658919.1 ENST00000659276.1 ENST00000659484.1 ENST00000659725.1 ENST00000660580.1 ENST00000661011.1 ENST00000661360.1 ENST00000662245.1 ENST00000662914.1 ENST00000663073.1 ENST00000663448.1 ENST00000664449.1 ENST00000665041.1 ENST00000665113.1 ENST00000666607.1 ENST00000666667.1 ENST00000667693.1 ENST00000668100.1 ENST00000668505.1 ENST00000670094.1 ENST00000670327.1 ENST00000670410.1 ENST00000671327.1 ENST00000673640.1 ENST00000673729.1 |
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| CDS TCA 72 bp | CTCATTAACTCTGACAAACTCAGCTATATGGCATGCTaGGACCTCAGCAGTGGAATAGTAGTACCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LINSDKLSYMAC*DLSSGIVVPGG Trigger: TCCTCCTGGTACTACTATTCCACTGCTGAGGTCTCAGCATGCCATATAGCTGAGTTTGTCAGAGTTAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 72 bp | CACACCCAGTTTTACTTATTTATAGAGATGACAACTTaGTGTTTCCAGGCTGGTCTCTTCCTGGGCTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HTQFYLFIEMTT*CFQAGLFLGSS Trigger: GCTTGAGCCCAGGAAGAGACCAGCCTGGAAACAGCAAGTTGTCATCTCTATAAATAAGTAAAACTGGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS GCA 72 bp | GGCACCAAGTTTAAACAGAGATTAAAGGGAAGTCTCTaGTTTAGAAGAACTGACACTCCAGGTCCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTKFKQRLKGSL*FRRTDTPGPEG Trigger: CCCTTCTGGACCTGGAGTGTCAGTTCTTCTAAAGCAGAGACTTCCCTTTAATCTCTGTTTAAACTTGGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 72 bp | GTTACCTTAACTTCATACCTGAGGGAGGAAGCAAGCTaGAGCAAGAGAAAGCAGTACCCTGTAATTGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VTLTSYLREEAS*SKRKQYPVIVA Trigger: TGCTACAATTACAGGGTACTGCTTTCTCTTGCTGCAGCTTGCTTCCTCCCTCAGGTATGAAGTTAAGGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674091.1 |
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| CDS CCA 72 bp | AAGATATATAAAAATAGCTGTGGGTCTCAGTTCCTCTaGGAAGGTAAGAGCCTAACTCTGGTGGGCAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: KIYKNSCGSQFL*EGKSLTLVGKW Trigger: CCACTTGCCCACCAGAGTTAGGCTCTTACCTTCCCAGAGGAACTGAGACCCACAGCTATTTTTATATATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000673634.1 ENST00000673640.1 ENST00000673729.1 ENST00000673769.1 |
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| CDS CAA 72 bp | CCACACCCAGTTTTACTTATTTATAGAGATGACAACTaGCTGTTTCCAGGCTGGTCTCTTCCTGGGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PHPVLLIYRDDN*LFPGWSLPGLK Trigger: CTTGAGCCCAGGAAGAGACCAGCCTGGAAACAGCAAGTTGTCATCTCTATAAATAAGTAAAACTGGGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CAA 90 bp | CGGTCAGAGGGCTCCAAAGCAACCAGTCTATTTCACAACTTTGTCTaGTTTGCCAGCTTTAACAAAACGGTAATGGCACTCTTCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RSEGSKATSLFHNFV*FASFNKTVMALFLE Trigger: TTCAAGGAAGAGTGCCATTACCGTTTTGTTAAAGCTGGCAAACAAGACAAAGTTGTGAAATAGACTGGTTGCTTTGGAGCCCTCTGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000654795.1 ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000658919.1 ENST00000670094.1 |
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| CDS CCA 72 bp | GCCACTGTTGACAAAACGGTTTTATTTCAGGAGTCTTaGCAGAGCCTAGCACAAGCCAGTGCATATAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: ATVDKTVLFQES*QSLAQASAYKC Trigger: ACATTTATATGCACTGGCTTGTGCTAGGCTCTGCCAAGACTCCTGAAATAAAACCGTTTTGTCAACAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654795.1 ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CCA 72 bp | CCCAAGATGCTCTCTACAAGATGTTACTCTACAGGATaGAGTAAGATCAGAGGCAGTGGCAATATTCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: PKMLSTRCYSTG*SKIRGSGNIQT Trigger: TGTCTGAATATTGCCACTGCCTCTGATCTTACTCCATCCTGTAGAGTAACATCTTGTAGAGAGCATCTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS CAA 72 bp | TCTCTCCACTCTTACACTGATCCAAAAACCCTTACATaGTACCCTGCACAAACCCGAAACATTCACTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SLHSYTDPKTLT*YPAQTRNIHSQ Trigger: CTGTGAGTGAATGTTTCGGGTTTGTGCAGGGTACAATGTAAGGGTTTTTGGATCAGTGTAAGAGTGGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000431043.2 ENST00000654795.1 ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000658919.1 ENST00000660318.1 ENST00000663073.1 ENST00000667693.1 ENST00000670094.1 |
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| CDS CAA 72 bp | ACCTATCCACCCTGTTGGTACCCAAATCCTCAATATTaGTCTCAGACTCTGAACCATACTGTCTTTGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TYPPCWYPNPQY*SQTLNHTVFAQ Trigger: CTGAGCAAAGACAGTATGGTTCAGAGTCTGAGACAAATATTGAGGATTTGGGTACCAACAGGGTGGATAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CAA 72 bp | CCGATCAGCTTGGGATTACAAGGTCAATACAGTAATTaGAGCACTTTTACTTGCATCCTCAGTACTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PISLGLQGQYSN*STFTCILSTLG Trigger: GCCAAGAGTACTGAGGATGCAAGTAAAAGTGCTCAAATTACTGTATTGACCTTGTAATCCCAAGCTGATCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS CAA 90 bp | CTGTCCTACACCTATCCACCCTGTTGGTACCCAAATCCTCAATATTaGTCTCAGACTCTGAACCATACTGTCTTTGCTCAGTTATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSYTYPPCWYPNPQY*SQTLNHTVFAQLFL Trigger: AAGAAATAACTGAGCAAAGACAGTATGGTTCAGAGTCTGAGACAAATATTGAGGATTTGGGTACCAACAGGGTGGATAGGTGTAGGACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CAA 90 bp | TTTCCTTCCCCGATCAGCTTGGGATTACAAGGTCAATACAGTAATTaGAGCACTTTTACTTGCATCCTCAGTACTCTTGGCCCATTATTC | + |
|
Preference number: 6 (lower is better) Translates to: FPSPISLGLQGQYSN*STFTCILSTLGPLF Trigger: GAATAATGGGCCAAGAGTACTGAGGATGCAAGTAAAAGTGCTCAAATTACTGTATTGACCTTGTAATCCCAAGCTGATCGGGGAAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 72 bp | TCTCATACTGAAAATGTATCCTCTTCTGCCCCAAGATaGTCTCTACAAGATGTTACTCTACAGGATGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SHTENVSSSAPR*SLQDVTLQDGV Trigger: TACTCCATCCTGTAGAGTAACATCTTGTAGAGAGCATCTTGGGGCAGAAGAGGATACATTTTCAGTATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 72 bp | GACCTCTCCTCTGAACTGTGGACCTCTATATCTAACTaGCTACTCAAAAATCCCAATTTGAATAACATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLSSELWTSISN*LLKNPNLNNMC Trigger: GCACATGTTATTCAAATTGGGATTTTTGAGTAGGCAGTTAGATATAGAGGTCCACAGTTCAGAGGAGAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS TCA 72 bp | CAATTACTTCTAATTCCTGTCTCTCCACTCTTACACTaGTCCAAAAACCCTTACATTGTACCCTGCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: QLLLIPVSPLLH*SKNPYIVPCTN Trigger: GTTTGTGCAGGGTACAATGTAAGGGTTTTTGGATCAGTGTAAGAGTGGAGAGACAGGAATTAGAAGTAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000431043.2 ENST00000654795.1 ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000658919.1 ENST00000660318.1 ENST00000663073.1 ENST00000667693.1 ENST00000670094.1 |
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| CDS TCA 72 bp | GTTGGTACCCAAATCCTCAATATTTGTCTCAGACTCTaGACCATACTGTCTTTGCTCAGTTATTTCTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VGTQILNICLRL*TILSLLSYFLG Trigger: GCCTAAGAAATAACTGAGCAAAGACAGTATGGTTCAGAGTCTGAGACAAATATTGAGGATTTGGGTACCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS GCA 72 bp | TTACAAGGTCAATACAGTAATTTGAGCACTTTTACTTaGATCCTCAGTACTCTTGGCCCATTATTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQGQYSNLSTFT*ILSTLGPLFLC Trigger: GCAGAGGAATAATGGGCCAAGAGTACTGAGGATGCAAGTAAAAGTGCTCAAATTACTGTATTGACCTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS CCA 72 bp | ACTTTATCAATGCTAGGCAAATTTATAACTTGTCCATaGTCAGCTCCATTTTCTCCCAATCTGCAGTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TLSMLGKFITCP*SAPFSPNLQCL Trigger: CAGACACTGCAGATTGGGAGAAAATGGAGCTGACCATGGACAAGTTATAAATTTGCCTAGCATTGATAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS TCA 72 bp | GTTATAAAATCACGGCAACAAAATTTACTCCACCTCTaGATTACTGGTCTTAATCTCAGAAGCCGAATCCGT | + |
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Preference number: 6 (lower is better) Translates to: VIKSRQQNLLHL*ITGLNLRSRIR Trigger: ACGGATTCGGCTTCTGAGATTAAGACCAGTAATTCAGAGGTGGAGTAAATTTTGTTGCCGTGATTTTATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000427501.6 ENST00000431043.2 ENST00000656092.1 ENST00000657398.1 ENST00000658871.1 ENST00000659484.1 ENST00000663073.1 ENST00000665270.1 ENST00000666912.1 ENST00000667289.1 ENST00000667693.1 ENST00000668505.1 ENST00000668512.1 ENST00000669413.1 ENST00000670410.1 |
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| CDS TCA 72 bp | CCTGAAGATCACTTCGTCTGTTACTTTGCAAAGTCATaGTCAGACACTATCTTCAGTTTTCATGTTGACCAA | + |
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Preference number: 6 (lower is better) Translates to: PEDHFVCYFAKS*SDTIFSFHVDQ Trigger: TTGGTCAACATGAAAACTGAAGATAGTGTCTGATCATGACTTTGCAAAGTAACAGACGAAGTGATCTTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS TCA 72 bp | GGTGTGTTCTTTGGGGTATATCTCAATTCTGACTTTTaGACGTCATCACCAGTAATGATTCTGGACTTACAT | + |
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Preference number: 6 (lower is better) Translates to: GVFFGVYLNSDF*TSSPVMILDLH Trigger: ATGTAAGTCCAGAATCATTACTGGTGATGACGTTCAAAAGTCAGAATTGAGATATACCCCAAAGAACACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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| CDS GCA 72 bp | CTCAGTTATTTCTTAGGCCTATTGTCCCAACATCTGTaGTGGTTTAGACTCAAATCCACTTGTTCTATTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSYFLGLLSQHL*WFRLKSTCSIF Trigger: GAAAATAGAACAAGTGGATTTGAGTCTAAACCAGCACAGATGTTGGGACAATAGGCCTAAGAAATAACTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 ENST00000670094.1 |
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| CDS CAA 90 bp | GTTTCTGGCAATAGAACTAATTTTAGAAAGCACCAAATGGTAGGTTaGAGCTTACTGTATTTTAAGATTACCTGGAAGCCTGGTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: VSGNRTNFRKHQMVG*SLLYFKITWKPGVR Trigger: CCTTACACCAGGCTTCCAGGTAATCTTAAAATACAGTAAGCTCAAACCTACCATTTGGTGCTTTCTAAAATTAGTTCTATTGCCAGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655116.1 ENST00000656092.1 ENST00000658077.1 |
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| CDS TCA 72 bp | AACAATGGTTTTTATCCAGGTATTCCCATCCTAATCTaGATGGAGTTCCAGAATAAGAGCAATCTTTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: NNGFYPGIPILI*MEFQNKSNLSL Trigger: CAACGAAAGATTGCTCTTATTCTGGAACTCCATTCAGATTAGGATGGGAATACCTGGATAAAAACCATTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655847.1 |
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| CDS CCA 72 bp | AAGTATGTATTATTGTTAACTATAGTCATCCCACAGTaGTGTAGAACACTAGAACTTATTCCTCCTACCCAG | + |
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Preference number: 6 (lower is better) Translates to: KYVLLLTIVIPQ*CRTLELIPPTQ Trigger: CTGGGTAGGAGGAATAAGTTCTAGTGTTCTACACCACTGTGGGATGACTATAGTTAACAATAATACATACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000623163.4 ENST00000673634.1 ENST00000673729.1 |
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| CDS CAA 72 bp | TCAACTATTTTTGTACAAAGGACAATTTGGGGTTTGTaGCTAATAGTTGGTCACTTTAACTGCATCAATAGG | + |
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Preference number: 6 (lower is better) Translates to: STIFVQRTIWGL*LIVGHFNCINR Trigger: CCTATTGATGCAGTTAAAGTGACCAACTATTAGCAACAAACCCCAAATTGTCCTTTGTACAAAAATAGTTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000656092.1 ENST00000658077.1 |
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