Pregenerated sensors for SNHG26 (Homo sapiens)
Ensembl gene IDs: ENSG00000228649Ensembl transcript IDs: ENST00000415611.8, ENST00000422542.4, ENST00000432668.1, ENST00000656301.1, ENST00000656687.1, ENST00000657608.1, ENST00000658124.1, ENST00000661147.1, ENST00000661582.1, ENST00000662021.1, ENST00000663057.1, ENST00000667557.1, ENST00000671680.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CATTTAATTGAAAAAGGACTAAAAGCTGCCTGTAGGCCGAATGCGTaGACGGCAGGGACTCAGGCACGGGAGGTGACGGGCGCCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: HLIEKGLKAACRPNA*TAGTQAREVTGAWR Trigger: CCGCCAGGCGCCCGTCACCTCCCGTGCCTGAGTCCCTGCCGTCCACGCATTCGGCCTACAGGCAGCTTTTAGTCCTTTTTCAATTAAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661582.1 |
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| CDS GCA 90 bp | CGGCTCCAGCAAGACTCGTCCCTCCAAGCCTTTAAATTATCTGACTaGGGGCCAGTAGCAAATGAACGGCACTGGTGGCGGTGGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: RLQQDSSLQAFKLSD*GPVANERHWWRWGM Trigger: CATCCCCCACCGCCACCAGTGCCGTTCATTTGCTACTGGCCCGCAGTCAGATAATTTAAAGGCTTGGAGGGACGAGTCTTGCTGGAGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000661582.1 ENST00000671680.1 |
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| CDS GCA 90 bp | CTGCTCATACGGGCAAGATGGCCTAACTCTGTTCATGTCAGAAAATaGTCTTGGTCACCAGGGCAGGGCTCAACAGGCCCTGTGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: LLIRARWPNSVHVRK*SWSPGQGSTGPVVR Trigger: TCTAACCACAGGGCCTGTTGAGCCCTGCCCTGGTGACCAAGAGCATTTTCTGACATGAACAGAGTTAGGCCATCTTGCCCGTATGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CCA 90 bp | ATACGGGCAAGATGGCCTAACTCTGTTCATGTCAGAAAATGCTCTTaGTCACCAGGGCAGGGCTCAACAGGCCCTGTGGTTAGACCTATT | + |
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Preference number: 5 (lower is better) Translates to: IRARWPNSVHVRKCS*SPGQGSTGPVVRPI Trigger: AATAGGTCTAACCACAGGGCCTGTTGAGCCCTGCCCTGGTGACCAAGAGCATTTTCTGACATGAACAGAGTTAGGCCATCTTGCCCGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 90 bp | GGGAGTGGCAGGGAAGGTATGAAACCTAGAATCCTAAGGGACATCTaGAGAACTCTGCTCATACGGGCAAGATGGCCTAACTCTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GSGREGMKPRILRDI*RTLLIRARWPNSVH Trigger: ATGAACAGAGTTAGGCCATCTTGCCCGTATGAGCAGAGTTCTTCAGATGTCCCTTAGGATTCTAGGTTTCATACCTTCCCTGCCACTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 90 bp | ATGAATACCAACAGTCCGGCAGGAGGACCAGATCATCAATATATTTaGTCCCCTGTCTGTGGGTCAAGTGATGACATGGGCATCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: MNTNSPAGGPDHQYI*SPVCGSSDDMGISR Trigger: ACGTGAGATGCCCATGTCATCACTTGACCCACAGACAGGGGAGCAAATATATTGATGATCTGGTCCTCCTGCCGGACTGTTGGTATTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CCA 90 bp | GAAGCACTATTAAACTCGCTTACCCTGAGGCTGAGTTCAGGGGGCTaGGAAGTTTCTAGTTCTGGGCACTTGCTCAGTTTTCACAATCCT | + |
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Preference number: 5 (lower is better) Translates to: EALLNSLTLRLSSGG*EVSSSGHLLSFHNP Trigger: AGGATTGTGAAAACTGAGCAAGTGCCCAGAACTAGAAACTTCCCAGCCCCCTGAACTCAGCCTCAGGGTAAGCGAGTTTAATAGTGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432668.1 |
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| CDS TCA 90 bp | GCAGTAACATGGCAGGGCACTTGTCCAGCTGCAAAATCAATGGTATaGGACTCCATTCCATCAGCTACAACATTCGGCTCTATTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AVTWQGTCPAAKSMV*DSIPSATTFGSIPR Trigger: TCTGGGAATAGAGCCGAATGTTGTAGCTGATGGAATGGAGTCTCATACCATTGATTTTGCAGCTGGACAAGTGCCCTGCCATGTTACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS GCA 90 bp | AGTATTCGGAATGGCGCACGGCAACATTTTCCATATCCCACTTTCTaGCATCTCATGCCCACAACAATGGATACATCAGAGGTGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: SIRNGARQHFPYPTF*HLMPTTMDTSEVRF Trigger: AAATCTCACCTCTGATGTATCCATTGTTGTGGGCATGAGATGGCAGAAAGTGGGATATGGAAAATGTTGCCGTGCGCCATTCCGAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415611.8 ENST00000662021.1 |
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| CDS GCA 90 bp | TCTGCCTTAAAGAGTGGCAGTAACATGGCAGGGCACTTGTCCAGCTaGAAAATCAATGGTATGAGACTCCATTCCATCAGCTACAACATT | + |
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Preference number: 5 (lower is better) Translates to: SALKSGSNMAGHLSS*KINGMRLHSISYNI Trigger: AATGTTGTAGCTGATGGAATGGAGTCTCATACCATTGATTTTGCAGCTGGACAAGTGCCCTGCCATGTTACTGCCACTCTTTAAGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS CCA 90 bp | TTAGACTGGATTTTGTCTTTGAAACAGATTAGTGTGGAGCTGTCCTaGAGATGGAGATGTCAACGGAGGATGATTCTGAGACAACTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LDWILSLKQISVELS*RWRCQRRMILRQLA Trigger: GGCCAGTTGTCTCAGAATCATCCTCCGTTGACATCTCCATCTCCAGGACAGCTCCACACTAATCTGTTTCAAAGACAAAATCCAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS TCA 90 bp | CACAACTGCCGTCTGGTCCTGCTTCTTGGGTATTTATTGTGTGCATaGGTCACTTCCGTGACTTATGTCCCAAGAGTGATTTTGATGTAT | + |
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Preference number: 5 (lower is better) Translates to: HNCRLVLLLGYLLCA*VTSVTYVPRVILMY Trigger: ATACATCAAAATCACTCTTGGGACATAAGTCACGGAAGTGACTCATGCACACAATAAATACCCAAGAAGCAGGACCAGACGGCAGTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415611.8 ENST00000656301.1 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000662021.1 |
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| CDS CCA 90 bp | AGCACCCTTCATTACTCCAAGGAAATGAGGACAAGGAATGCAGACTaGCTTTTTAGCCAGCTTTTCAGAGTCAACCACGTAGTTTATGCA | + |
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Preference number: 5 (lower is better) Translates to: STLHYSKEMRTRNAD*LFSQLFRVNHVVYA Trigger: TGCATAAACTACGTGGTTGACTCTGAAAAGCTGGCTAAAAAGCCAGTCTGCATTCCTTGTCCTCATTTCCTTGGAGTAATGAAGGGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 90 bp | AATACACAACTGCCGTCTGGTCCTGCTTCTTGGGTATTTATTGTGTaGATGAGTCACTTCCGTGACTTATGTCCCAAGAGTGATTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: NTQLPSGPASWVFIV*MSHFRDLCPKSDFD Trigger: ATCAAAATCACTCTTGGGACATAAGTCACGGAAGTGACTCATGCACACAATAAATACCCAAGAAGCAGGACCAGACGGCAGTTGTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415611.8 ENST00000656301.1 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000662021.1 |
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| CDS CCA 90 bp | ATCATCAATATATTTGCTCCCCTGTCTGTGGGTCAAGTGATGACATaGGCATCTCACGTGATCAGTTGTTGTTTCATTCTTGGATGGAAC | + |
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Preference number: 5 (lower is better) Translates to: IINIFAPLSVGQVMT*ASHVISCCFILGWN Trigger: GTTCCATCCAAGAATGAAACAACAACTGATCACGTGAGATGCCCATGTCATCACTTGACCCACAGACAGGGGAGCAAATATATTGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS TCA 90 bp | ATTTCTTGGTTAGCCAGTATTTACCAAGGACATCCTAAGCTTTCCTaGAATGGAAAACAGCCAATATGGAAAGTAATGCTGCAGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ISWLASIYQGHPKLS*NGKQPIWKVMLQGS Trigger: GCTTCCCTGCAGCATTACTTTCCATATTGGCTGTTTTCCATTTCAGGAAAGCTTAGGATGTCCTTGGTAAATACTGGCTAACCAAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 90 bp | TTTTCCAACTTGGCAGTTCATGTAGATAGTGACCCCAAACCATCTTaGCATAGATTTCACTGGAAACACCACTTAAGTTCATCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: FSNLAVHVDSDPKPS*HRFHWKHHLSSSAS Trigger: AGATGCTGATGAACTTAAGTGGTGTTTCCAGTGAAATCTATGGCAAGATGGTTTGGGGTCACTATCTACATGAACTGCCAAGTTGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657608.1 ENST00000662021.1 |
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| CDS GCA 90 bp | TGCATGATGTTAAATTCACCAGAAGGAAGGACTCACCCATTAAGTTaGAATGTTTCCTTCCTCTCACTTACAGGGATGAATACCAACAGT | + |
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Preference number: 5 (lower is better) Translates to: CMMLNSPEGRTHPLS*NVSFLSLTGMNTNS Trigger: ACTGTTGGTATTCATCCCTGTAAGTGAGAGGAAGGAAACATTGCAACTTAATGGGTGAGTCCTTCCTTCTGGTGAATTTAACATCATGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS GCA 90 bp | ATAATCAAGATGCAGAACTGTAGAATCACACTAACAATTCCTTCCTaGCCTTGTAATCAACCCCTTTTTGATCCCAAGGAACTCACTGAC | + |
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Preference number: 5 (lower is better) Translates to: IIKMQNCRITLTIPS*PCNQPLFDPKELTD Trigger: GTCAGTGAGTTCCTTGGGATCAAAAAGGGGTTGATTACAAGGGCAGGAAGGAATTGTTAGTGTGATTCTACAGTTCTGCATCTTGATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667557.1 |
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| CDS TCA 90 bp | ATATGGCCATTCTCGAAATCAAATTGTGACTCAATCTACATGAACTaGCATGTCAATGCCACAGTTGTTACACTGGGTCTTATTTACGTC | + |
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Preference number: 5 (lower is better) Translates to: IWPFSKSNCDSIYMN*HVNATVVTLGLIYV Trigger: GACGTAAATAAGACCCAGTGTAACAACTGTGGCATTGACATGTCAGTTCATGTAGATTGAGTCACAATTTGATTTCGAGAATGGCCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 90 bp | ATGGGATATGGCCATTCTCGAAATCAAATTGTGACTCAATCTACATaGACTGACATGTCAATGCCACAGTTGTTACACTGGGTCTTATTT | + |
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Preference number: 5 (lower is better) Translates to: MGYGHSRNQIVTQST*TDMSMPQLLHWVLF Trigger: AAATAAGACCCAGTGTAACAACTGTGGCATTGACATGTCAGTTCATGTAGATTGAGTCACAATTTGATTTCGAGAATGGCCATATCCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 90 bp | TGGAGTAAGACAAAATGGGATATGGCCATTCTCGAAATCAAATTGTaGCTCAATCTACATGAACTGACATGTCAATGCCACAGTTGTTAC | + |
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Preference number: 5 (lower is better) Translates to: WSKTKWDMAILEIKL*LNLHELTCQCHSCY Trigger: GTAACAACTGTGGCATTGACATGTCAGTTCATGTAGATTGAGTCACAATTTGATTTCGAGAATGGCCATATCCCATTTTGTCTTACTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CCA 72 bp | GAAAAAGGACTAAAAGCTGCCTGTAGGCCGAATGCGTaGACGGCAGGGACTCAGGCACGGGAGGTGACGGGC | + |
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Preference number: 6 (lower is better) Translates to: EKGLKAACRPNA*TAGTQAREVTG Trigger: GCCCGTCACCTCCCGTGCCTGAGTCCCTGCCGTCCACGCATTCGGCCTACAGGCAGCTTTTAGTCCTTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661582.1 |
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| CDS GCA 72 bp | GAACCCAGAGACCGTCCGGGGCTCGGCGCCTCCGCCTaGGGTTGGAATTTGATCCTCAAAATGCAATCATTT | + |
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Preference number: 6 (lower is better) Translates to: EPRDRPGLGASA*GWNLILKMQSF Trigger: AAATGATTGCATTTTGAGGATCAAATTCCAACCGCAGGCGGAGGCGCCGAGCCCCGGACGGTCTCTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661582.1 |
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| CDS GCA 72 bp | CGGGCAAGATGGCCTAACTCTGTTCATGTCAGAAAATaGTCTTGGTCACCAGGGCAGGGCTCAACAGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RARWPNSVHVRK*SWSPGQGSTGP Trigger: AGGGCCTGTTGAGCCCTGCCCTGGTGACCAAGAGCATTTTCTGACATGAACAGAGTTAGGCCATCTTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 72 bp | CAAGACTCGTCCCTCCAAGCCTTTAAATTATCTGACTaGGGGCCAGTAGCAAATGAACGGCACTGGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QDSSLQAFKLSD*GPVANERHWWR Trigger: CCGCCACCAGTGCCGTTCATTTGCTACTGGCCCGCAGTCAGATAATTTAAAGGCTTGGAGGGACGAGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661582.1 ENST00000671680.1 |
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| CDS TCA 72 bp | CAAAAATTAGCTTGTAATCTCAGCTACTCGGGAGGCTaGGGTGGAGAATCGCTTGAACCCGGGAGGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QKLACNLSYSGG*GGESLEPGRQR Trigger: CCTCTGCCTCCCGGGTTCAAGCGATTCTCCACCTCAGCCTCCCGAGTAGCTGAGATTACAAGCTAATTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667557.1 |
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| CDS CCA 72 bp | AGATGGCCTAACTCTGTTCATGTCAGAAAATGCTCTTaGTCACCAGGGCAGGGCTCAACAGGCCCTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RWPNSVHVRKCS*SPGQGSTGPVV Trigger: AACCACAGGGCCTGTTGAGCCCTGCCCTGGTGACCAAGAGCATTTTCTGACATGAACAGAGTTAGGCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 72 bp | AACAGTCCGGCAGGAGGACCAGATCATCAATATATTTaGTCCCCTGTCTGTGGGTCAAGTGATGACATGGGC | + |
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Preference number: 6 (lower is better) Translates to: NSPAGGPDHQYI*SPVCGSSDDMG Trigger: GCCCATGTCATCACTTGACCCACAGACAGGGGAGCAAATATATTGATGATCTGGTCCTCCTGCCGGACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CCA 72 bp | TTAAACTCGCTTACCCTGAGGCTGAGTTCAGGGGGCTaGGAAGTTTCTAGTTCTGGGCACTTGCTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LNSLTLRLSSGG*EVSSSGHLLSF Trigger: AAAACTGAGCAAGTGCCCAGAACTAGAAACTTCCCAGCCCCCTGAACTCAGCCTCAGGGTAAGCGAGTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432668.1 |
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| CDS TCA 72 bp | TGGCAGGGCACTTGTCCAGCTGCAAAATCAATGGTATaGGACTCCATTCCATCAGCTACAACATTCGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: WQGTCPAAKSMV*DSIPSATTFGS Trigger: AGAGCCGAATGTTGTAGCTGATGGAATGGAGTCTCATACCATTGATTTTGCAGCTGGACAAGTGCCCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS GCA 72 bp | CTGCCGTCTGGTCCTGCTTCTTGGGTATTTATTGTGTaGATGAGTCACTTCCGTGACTTATGTCCCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LPSGPASWVFIV*MSHFRDLCPKS Trigger: ACTCTTGGGACATAAGTCACGGAAGTGACTCATGCACACAATAAATACCCAAGAAGCAGGACCAGACGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415611.8 ENST00000656301.1 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000662021.1 |
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| CDS GCA 72 bp | AAGAGTGGCAGTAACATGGCAGGGCACTTGTCCAGCTaGAAAATCAATGGTATGAGACTCCATTCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: KSGSNMAGHLSS*KINGMRLHSIS Trigger: GCTGATGGAATGGAGTCTCATACCATTGATTTTGCAGCTGGACAAGTGCCCTGCCATGTTACTGCCACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS CAA 72 bp | CTATTTCTGTCCAGGGTTTATCAGCTAGTTCGCCAATaGGCTATACGACCCCAGCAATACACAGTAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LFLSRVYQLVRQ*AIRPQQYTVGH Trigger: GTGCCCTACTGTGTATTGCTGGGGTCGTATAGCCAATTGGCGAACTAGCTGATAAACCCTGGACAGAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CAA 90 bp | GTGCTCTATTCTGCCTTAAAGAGTGGCAGTAACATGGCAGGGCACTaGTCCAGCTGCAAAATCAATGGTATGAGACTCCATTCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VLYSALKSGSNMAGH*SSCKINGMRLHSIS Trigger: GCTGATGGAATGGAGTCTCATACCATTGATTTTGCAGCTGGACAAGTGCCCTGCCATGTTACTGCCACTCTTTAAGGCAGAATAGAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS CAA 90 bp | GGTGATGCTATGTTTAACAGAGGTTCTATATTGGACAACTCTGCATaGCTAGGCTATAGGGTAAGGGGATTTGGTAGTGGGGGAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GDAMFNRGSILDNSA*LGYRVRGFGSGGVA Trigger: TGCCACTCCCCCACTACCAAATCCCCTTACCCTATAGCCTAGCAATGCAGAGTTGTCCAATATAGAACCTCTGTTAAACATAGCATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 72 bp | AGGGAAGGTATGAAACCTAGAATCCTAAGGGACATCTaGAGAACTCTGCTCATACGGGCAAGATGGCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: REGMKPRILRDI*RTLLIRARWPN Trigger: GTTAGGCCATCTTGCCCGTATGAGCAGAGTTCTTCAGATGTCCCTTAGGATTCTAGGTTTCATACCTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 72 bp | AGCCTTTCGAACACATCTCTGGCTGTTCACAGAATGTaGGCATGGCTTTCGTCTCAAGAGGAAAAGTTACCC | + |
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Preference number: 6 (lower is better) Translates to: SLSNTSLAVHRM*AWLSSQEEKLP Trigger: GGGTAACTTTTCCTCTTGAGACGAAAGCCATGCTCACATTCTGTGAACAGCCAGAGATGTGTTCGAAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 |
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| CDS CAA 72 bp | TCTGCCTTAAAGAGTGGCAGTAACATGGCAGGGCACTaGTCCAGCTGCAAAATCAATGGTATGAGACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SALKSGSNMAGH*SSCKINGMRLH Trigger: ATGGAGTCTCATACCATTGATTTTGCAGCTGGACAAGTGCCCTGCCATGTTACTGCCACTCTTTAAGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS TCA 72 bp | CGTCTGGTCCTGCTTCTTGGGTATTTATTGTGTGCATaGGTCACTTCCGTGACTTATGTCCCAAGAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: RLVLLLGYLLCA*VTSVTYVPRVI Trigger: AATCACTCTTGGGACATAAGTCACGGAAGTGACTCATGCACACAATAAATACCCAAGAAGCAGGACCAGACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415611.8 ENST00000656301.1 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000662021.1 |
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| CDS GCA 72 bp | ATTTTTGCAGCACTGATGAGCGTGCCAATACACAACTaGCGTCTGGTCCTGCTTCTTGGGTATTTATTGTGT | + |
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Preference number: 6 (lower is better) Translates to: IFAALMSVPIHN*RLVLLLGYLLC Trigger: ACACAATAAATACCCAAGAAGCAGGACCAGACGGCAGTTGTGTATTGGCACGCTCATCAGTGCTGCAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000415611.8 ENST00000656301.1 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000662021.1 |
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| CDS TCA 72 bp | TTCACATGCCCAAGTTCCTCACTTGGAAGCCCTCTTTaGAAACTTTCAACTCCAGGTTTGCTTCTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: FTCPSSSLGSPL*KLSTPGLLLFM Trigger: CATGAAGAGAAGCAAACCTGGAGTTGAAAGTTTTCAAAGAGGGCTTCCAAGTGAGGAACTTGGGCATGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 72 bp | TTGGCAGTTCATGTAGATAGTGACCCCAAACCATCTTaGCATAGATTTCACTGGAAACACCACTCCTCTACT | + |
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Preference number: 6 (lower is better) Translates to: LAVHVDSDPKPS*HRFHWKHHSST Trigger: AGTAGAGGAGTGGTGTTTCCAGTGAAATCTATGGCAAGATGGTTTGGGGTCACTATCTACATGAACTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000415611.8 ENST00000656301.1 ENST00000656687.1 ENST00000658124.1 ENST00000661147.1 |
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| CDS GCA 72 bp | TTGGAAGCCCTCTTTGAAAACTTTCAACTCCAGGTTTaGTTCTCTTCATGGCACTTGAGCACAAAAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: LEALFENFQLQV*FSSWHLSTKGW Trigger: CCATCCTTTTGTGCTCAAGTGCCATGAAGAGAAGCAAACCTGGAGTTGAAAGTTTTCAAAGAGGGCTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CCA 72 bp | CATTACTCCAAGGAAATGAGGACAAGGAATGCAGACTaGCTTTTTAGCCAGCTTTTCAGAGTCAACCACGTA | + |
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Preference number: 6 (lower is better) Translates to: HYSKEMRTRNAD*LFSQLFRVNHV Trigger: TACGTGGTTGACTCTGAAAAGCTGGCTAAAAAGCCAGTCTGCATTCCTTGTCCTCATTTCCTTGGAGTAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CCA 72 bp | ATATTTGCTCCCCTGTCTGTGGGTCAAGTGATGACATaGGCATCTCACGTGATCAGTTGTTGTTTCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: IFAPLSVGQVMT*ASHVISCCFIL Trigger: AAGAATGAAACAACAACTGATCACGTGAGATGCCCATGTCATCACTTGACCCACAGACAGGGGAGCAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CAA 90 bp | CATCCCATTTTCCTGGGTGATGCTATGTTTAACAGAGGTTCTATATaGGACAACTCTGCATTGCTAGGCTATAGGGTAAGGGGATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: HPIFLGDAMFNRGSI*DNSALLGYRVRGFG Trigger: ACCAAATCCCCTTACCCTATAGCCTAGCAATGCAGAGTTGTCCAATATAGAACCTCTGTTAAACATAGCATCACCCAGGAAAATGGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CAA 90 bp | CCTGTCTGTGGGTCAAGTGATGACATGGGCATCTCACGTGATCAGTaGTTGTTTCATTCTTGGATGGAACTTTGTTTCACTTCTTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: PVCGSSDDMGISRDQ*LFHSWMELCFTSCS Trigger: ACTACAAGAAGTGAAACAAAGTTCCATCCAAGAATGAAACAACAACTGATCACGTGAGATGCCCATGTCATCACTTGACCCACAGACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS TCA 72 bp | ACTTTCAACTCCAGGTTTGCTTCTCTTCATGGCACTTaGGCACAAAAGGATGGTAGTTTAACAGTCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: TFNSRFASLHGT*AQKDGSLTVHS Trigger: GGAATGGACTGTTAAACTACCATCCTTTTGTGCTCAAGTGCCATGAAGAGAAGCAAACCTGGAGTTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CCA 72 bp | ATTTTGTCTTTGAAACAGATTAGTGTGGAGCTGTCCTaGAGATGGAGATGTCAACGGAGGATGATTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: ILSLKQISVELS*RWRCQRRMILR Trigger: TCTCAGAATCATCCTCCGTTGACATCTCCATCTCCAGGACAGCTCCACACTAATCTGTTTCAAAGACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000422542.4 ENST00000656687.1 ENST00000657608.1 ENST00000658124.1 ENST00000661147.1 ENST00000661582.1 ENST00000662021.1 ENST00000663057.1 |
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| CDS CAA 72 bp | ATGTTTAACAGAGGTTCTATATTGGACAACTCTGCATaGCTAGGCTATAGGGTAAGGGGATTTGGTAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: MFNRGSILDNSA*LGYRVRGFGSG Trigger: CCCACTACCAAATCCCCTTACCCTATAGCCTAGCAATGCAGAGTTGTCCAATATAGAACCTCTGTTAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CAA 72 bp | TTCCTGGGTGATGCTATGTTTAACAGAGGTTCTATATaGGACAACTCTGCATTGCTAGGCTATAGGGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: FLGDAMFNRGSI*DNSALLGYRVR Trigger: CCTTACCCTATAGCCTAGCAATGCAGAGTTGTCCAATATAGAACCTCTGTTAAACATAGCATCACCCAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CAA 90 bp | GTCTGTGGGTCAAGTGATGACATGGGCATCTCACGTGATCAGTTGTaGTTTCATTCTTGGATGGAACTTTGTTTCACTTCTTGTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VCGSSDDMGISRDQL*FHSWMELCFTSCSF Trigger: GAAACTACAAGAAGTGAAACAAAGTTCCATCCAAGAATGAAACAACAACTGATCACGTGAGATGCCCATGTCATCACTTGACCCACAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS TCA 72 bp | GGCCATTCTCGAAATCAAATTGTGACTCAATCTACATaGACTGACATGTCAATGCCACAGTTGTTACACTGG | + |
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Preference number: 6 (lower is better) Translates to: GHSRNQIVTQST*TDMSMPQLLHW Trigger: CCAGTGTAACAACTGTGGCATTGACATGTCAGTTCATGTAGATTGAGTCACAATTTGATTTCGAGAATGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS GCA 72 bp | TTGGCAGTTCATGTAGATAGTGACCCCAAACCATCTTaGCATAGATTTCACTGGAAACACCACTTAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LAVHVDSDPKPS*HRFHWKHHLSS Trigger: TGAACTTAAGTGGTGTTTCCAGTGAAATCTATGGCAAGATGGTTTGGGGTCACTATCTACATGAACTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657608.1 ENST00000662021.1 |
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| CDS GCA 72 bp | ATGCAGAACTGTAGAATCACACTAACAATTCCTTCCTaGCCTTGTAATCAACCCCTTTTTGATCCCAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: MQNCRITLTIPS*PCNQPLFDPKE Trigger: TTCCTTGGGATCAAAAAGGGGTTGATTACAAGGGCAGGAAGGAATTGTTAGTGTGATTCTACAGTTCTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667557.1 |
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| CDS CCA 72 bp | GCTCAGGAACACCATGGAGTAAGACAAAATGGGATATaGCCATTCTCGAAATCAAATTGTGACTCAATCTAC | + |
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Preference number: 6 (lower is better) Translates to: AQEHHGVRQNGI*PFSKSNCDSIY Trigger: GTAGATTGAGTCACAATTTGATTTCGAGAATGGCCATATCCCATTTTGTCTTACTCCATGGTGTTCCTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CAA 72 bp | GTTAAATTCACCAGAAGGAAGGACTCACCCATTAAGTaGCAATGTTTCCTTCCTCTCACTTACAGGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VKFTRRKDSPIK*QCFLPLTYRDE Trigger: TTCATCCCTGTAAGTGAGAGGAAGGAAACATTGCAACTTAATGGGTGAGTCCTTCCTTCTGGTGAATTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CAA 90 bp | ATGCATGATGTTAAATTCACCAGAAGGAAGGACTCACCCATTAAGTaGCAATGTTTCCTTCCTCTCACTTACAGGGATGAATACCAACAG | + |
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Preference number: 6 (lower is better) Translates to: MHDVKFTRRKDSPIK*QCFLPLTYRDEYQQ Trigger: CTGTTGGTATTCATCCCTGTAAGTGAGAGGAAGGAAACATTGCAACTTAATGGGTGAGTCCTTCCTTCTGGTGAATTTAACATCATGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS GCA 72 bp | TTAAATTCACCAGAAGGAAGGACTCACCCATTAAGTTaGAATGTTTCCTTCCTCTCACTTACAGGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: LNSPEGRTHPLS*NVSFLSLTGMN Trigger: ATTCATCCCTGTAAGTGAGAGGAAGGAAACATTGCAACTTAATGGGTGAGTCCTTCCTTCTGGTGAATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CAA 72 bp | TCAAGTGATGACATGGGCATCTCACGTGATCAGTTGTaGTTTCATTCTTGGATGGAACTTTGTTTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SSDDMGISRDQL*FHSWMELCFTS Trigger: AGAAGTGAAACAAAGTTCCATCCAAGAATGAAACAACAACTGATCACGTGAGATGCCCATGTCATCACTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS TCA 72 bp | TTAGCCAGTATTTACCAAGGACATCCTAAGCTTTCCTaGAATGGAAAACAGCCAATATGGAAAGTAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LASIYQGHPKLS*NGKQPIWKVML Trigger: CAGCATTACTTTCCATATTGGCTGTTTTCCATTTCAGGAAAGCTTAGGATGTCCTTGGTAAATACTGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 72 bp | TTCTCGAAATCAAATTGTGACTCAATCTACATGAACTaGCATGTCAATGCCACAGTTGTTACACTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FSKSNCDSIYMN*HVNATVVTLGL Trigger: AAGACCCAGTGTAACAACTGTGGCATTGACATGTCAGTTCATGTAGATTGAGTCACAATTTGATTTCGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 72 bp | ACAAAATGGGATATGGCCATTCTCGAAATCAAATTGTaGCTCAATCTACATGAACTGACATGTCAATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TKWDMAILEIKL*LNLHELTCQCH Trigger: GTGGCATTGACATGTCAGTTCATGTAGATTGAGTCACAATTTGATTTCGAGAATGGCCATATCCCATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS TCA 72 bp | CTTCAAAGTAGAGTACAAGGACATCCTAAGCTTTCCTaGAATGGAAAACAGCCAATATGGAAAGTAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: LQSRVQGHPKLS*NGKQPIWKVML Trigger: CAGCATTACTTTCCATATTGGCTGTTTTCCATTTCAGGAAAGCTTAGGATGTCCTTGTACTCTACTTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662021.1 |
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| CDS CCA 72 bp | ATGGGCATCTCACGTGATCAGTTGTTGTTTCATTCTTaGATGGAACTTTGTTTCACTTCTTGTAGTTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: MGISRDQLLFHS*MELCFTSCSFY Trigger: ATAGAAACTACAAGAAGTGAAACAAAGTTCCATCCAAGAATGAAACAACAACTGATCACGTGAGATGCCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656301.1 |
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| CDS CAA 90 bp | GAACTGTCTCTATCACAGGACTTGACACAACACAACAGCAAATATTaGCCAAATTACACAATTAAGTATGTAAGGCTTAAGGACCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ELSLSQDLTQHNSKY*PNYTIKYVRLKDLQ Trigger: TTGAAGGTCCTTAAGCCTTACATACTTAATTGTGTAATTTGGCAAATATTTGCTGTTGTGTTGTGTCAAGTCCTGTGATAGAGACAGTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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| CDS CAA 72 bp | CTATCACAGGACTTGACACAACACAACAGCAAATATTaGCCAAATTACACAATTAAGTATGTAAGGCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: LSQDLTQHNSKY*PNYTIKYVRLK Trigger: CTTAAGCCTTACATACTTAATTGTGTAATTTGGCAAATATTTGCTGTTGTGTTGTGTCAAGTCCTGTGATAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415611.8 |
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