Pregenerated sensors for SNHG19 (Homo sapiens)

Ensembl gene IDs: ENSG00000260260

Ensembl transcript IDs: ENST00000563192.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ACTTCAATAGACACAGCGCCCACCTTACCGCTAGGCCCTCCGGATTaGGGTTTACTTAGGTTCAAAACTTGCAGCCGGCTCGCGACGAAA	+
Preference number: 5 (lower is better) Translates to: TSIDTAPTLPLGPPD*GLLRFKTCSRLATK Trigger: TTTCGTCGCGAGCCGGCTGCAAGTTTTGAACCTAAGTAAACCTCAATCCGGAGGGCCTAGCGGTAAGGTGGGCGCTGTGTCTATTGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563192.1
CDS CCA 72 bp	CCTGCAGCGTTCGGACGGCCCTCAAAGCCACGCTCGTaGCTCAGTTCGTCCCAAGATCGTAGCACATGGCGA	+
Preference number: 6 (lower is better) Translates to: PAAFGRPSKPRS*LSSSQDRSTWR Trigger: TCGCCATGTGCTACGATCTTGGGACGAACTGAGCCACGAGCGTGGCTTTGAGGGCCGTCCGAACGCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563192.1
CDS TCA 72 bp	GACACAGCGCCCACCTTACCGCTAGGCCCTCCGGATTaGGGTTTACTTAGGTTCAAAACTTGCAGCCGGCTC	+
Preference number: 6 (lower is better) Translates to: DTAPTLPLGPPD*GLLRFKTCSRL Trigger: GAGCCGGCTGCAAGTTTTGAACCTAAGTAAACCTCAATCCGGAGGGCCTAGCGGTAAGGTGGGCGCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563192.1

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