Pregenerated sensors for SNHG17 (Homo sapiens)
Ensembl gene IDs: ENSG00000196756Ensembl transcript IDs: ENST00000413755.5, ENST00000414142.5, ENST00000417578.6, ENST00000423536.6, ENST00000424235.1, ENST00000436764.6, ENST00000449469.5, ENST00000456953.6, ENST00000651115.2, ENST00000653277.1, ENST00000653343.1, ENST00000653697.1, ENST00000653753.1, ENST00000653938.1, ENST00000654008.1, ENST00000654092.1, ENST00000654183.1, ENST00000654389.1, ENST00000654853.1, ENST00000655198.1, ENST00000655311.1, ENST00000655520.1, ENST00000655692.1, ENST00000656023.1, ENST00000656320.1, ENST00000657216.1, ENST00000657429.1, ENST00000657665.1, ENST00000657843.1, ENST00000657868.1, ENST00000658051.1, ENST00000658076.1, ENST00000658141.1, ENST00000658324.1, ENST00000658455.1, ENST00000658488.1, ENST00000658905.1, ENST00000659102.1, ENST00000659186.1, ENST00000659255.1, ENST00000659400.1, ENST00000659753.1, ENST00000660064.1, ENST00000660189.1, ENST00000660558.1, ENST00000660885.1, ENST00000661252.1, ENST00000662213.1, ENST00000662568.1, ENST00000662572.1, ENST00000662982.1, ENST00000663187.1, ENST00000663534.1, ENST00000663540.1, ENST00000663784.1, ENST00000663955.1, ENST00000664073.1, ENST00000664626.1, ENST00000664636.1, ENST00000664964.1, ENST00000665003.1, ENST00000665181.1, ENST00000665233.1, ENST00000665440.1, ENST00000665693.1, ENST00000665735.1, ENST00000666225.1, ENST00000666268.1, ENST00000666331.1, ENST00000666419.1, ENST00000666549.1, ENST00000666806.1, ENST00000667188.1, ENST00000667282.1, ENST00000667412.1, ENST00000667835.1, ENST00000667912.1, ENST00000668042.1, ENST00000668054.1, ENST00000668482.1, ENST00000669033.1, ENST00000669114.1, ENST00000669137.1, ENST00000669405.1, ENST00000669480.1, ENST00000670051.1, ENST00000670958.1, ENST00000671249.1, ENST00000671309.1
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCTCAGTTTCCCCCGATGGTGAGAGTGGAGCCGACCATGCGCCCTaGTGTGGACTCACCCGGCGCCCTGGCGTCGAGTGGCGGCGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ASVSPDGESGADHAP*CGLTRRPGVEWRRR Trigger: TCTCCGCCGCCACTCGACGCCAGGGCGCCGGGTGAGTCCACAGCAGGGCGCATGGTCGGCTCCACTCTCACCATCGGGGGAAACTGAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000456953.6 ENST00000653697.1 ENST00000655520.1 ENST00000656023.1 ENST00000657843.1 ENST00000658076.1 ENST00000658905.1 ENST00000660885.1 ENST00000661252.1 ENST00000664073.1 ENST00000664636.1 ENST00000665181.1 ENST00000665735.1 ENST00000666268.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 |
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| CDS TCA 90 bp | GCGGTGGCGTGCGATGGCGAAGGACGGCGAGGGACGGCGAAGGACTaGGGCCACACGACAAGGAAGCTACGCTCGTTTCGCGCCGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: AVACDGEGRRGTAKD*GHTTRKLRSFRAGG Trigger: TCCGCCGGCGCGAAACGAGCGTAGCTTCCTTGTCGTGTGGCCTCAGTCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000456953.6 ENST00000651115.2 ENST00000654008.1 ENST00000654183.1 ENST00000657868.1 ENST00000658488.1 ENST00000660558.1 ENST00000660885.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666419.1 ENST00000670958.1 |
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| CDS CCA 90 bp | GACCATGCGCCCTGCTGTGGACTCACCCGGCGCCCTGGCGTCGAGTaGCGGCGGAGACCTGACAGACAGCGTGGGAAAAATCAAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: DHAPCCGLTRRPGVE*RRRPDRQRGKNQDV Trigger: GACATCTTGATTTTTCCCACGCTGTCTGTCAGGTCTCCGCCGCCACTCGACGCCAGGGCGCCGGGTGAGTCCACAGCAGGGCGCATGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000456953.6 ENST00000653697.1 ENST00000655520.1 ENST00000656023.1 ENST00000657843.1 ENST00000658076.1 ENST00000658905.1 ENST00000660885.1 ENST00000661252.1 ENST00000664073.1 ENST00000664636.1 ENST00000665181.1 ENST00000665735.1 ENST00000666268.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 |
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| CDS CCA 90 bp | CAAGATGTCTGCAGATTTCGAGAGATGGGGTGCGGTGGCGTGCGATaGCGAAGGACGGCGAGGGACGGCGAAGGACTGAGGCCACACGAC | + |
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Preference number: 5 (lower is better) Translates to: QDVCRFREMGCGGVR*RRTARDGEGLRPHD Trigger: GTCGTGTGGCCTCAGTCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 36 transcripts: ENST00000413755.5 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 |
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| CDS CCA 90 bp | GTCAGGGACTCTCAGAGCCCCAATCAAGCTCAGGGAGCACCTTCTTaGCAGCAGCCCCACGAAGGCAGAAGAGGGCCCAGGCCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRDSQSPNQAQGAPS*QQPHEGRRGPRPVP Trigger: AGGGACAGGCCTGGGCCCTCTTCTGCCTTCGTGGGGCTGCTGCCAAGAAGGTGCTCCCTGAGCTTGATTGGGGCTCTGAGAGTCCCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424235.1 |
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| CDS TCA 90 bp | AGCCCACAAGGCCCGGCGCCCTGGCGTCGAGTGGCGGCGGAGACCTaGCAGACAGCGTGGGAAAAATCAAGATGTCTGCAGATTTCGAGA | + |
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Preference number: 5 (lower is better) Translates to: SPQGPAPWRRVAAET*QTAWEKSRCLQISR Trigger: TCTCGAAATCTGCAGACATCTTGATTTTTCCCACGCTGTCTGTCAGGTCTCCGCCGCCACTCGACGCCAGGGCGCCGGGCCTTGTGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 23 transcripts: ENST00000417578.6 ENST00000436764.6 ENST00000651115.2 ENST00000654008.1 ENST00000654183.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658488.1 ENST00000660558.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664626.1 ENST00000665233.1 ENST00000666331.1 ENST00000666419.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS TCA 90 bp | CTGTGGACTCACCCGGCGCCCTGGCGTCGAGTGGCGGCGGAGACCTaGCAGACAGCGTGGGAAAAATCAAGATGTCTGCAGATTTCGAGA | + |
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Preference number: 5 (lower is better) Translates to: LWTHPAPWRRVAAET*QTAWEKSRCLQISR Trigger: TCTCGAAATCTGCAGACATCTTGATTTTTCCCACGCTGTCTGTCAGGTCTCCGCCGCCACTCGACGCCAGGGCGCCGGGTGAGTCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000456953.6 ENST00000653697.1 ENST00000655520.1 ENST00000656023.1 ENST00000657843.1 ENST00000658076.1 ENST00000658905.1 ENST00000660885.1 ENST00000661252.1 ENST00000664073.1 ENST00000664636.1 ENST00000665181.1 ENST00000665735.1 ENST00000666268.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 |
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| CDS GCA 90 bp | CAGCGTGGGAAAAATCAAGATGTCTGCAGATTTCGAGAGATGGGGTaGGGTGGCGTGCGATGGCGAAGGACGGCGAGGGACGGCGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QRGKNQDVCRFREMG*GGVRWRRTARDGEG Trigger: TCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTGATTTTTCCCACGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 41 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000436764.6 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CCA 90 bp | ACAGACAGCGTGGGAAAAATCAAGATGTCTGCAGATTTCGAGAGATaGGGTGCGGTGGCGTGCGATGGCGAAGGACGGCGAGGGACGGCG | + |
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Preference number: 5 (lower is better) Translates to: TDSVGKIKMSADFER*GAVACDGEGRRGTA Trigger: CGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTGATTTTTCCCACGCTGTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 41 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000436764.6 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS TCA 90 bp | TCCTGGTGGCCCACGGACAAGACCGTCAAAGAGAACACCATGGGATaGCCACTGGGCCAGTGGGAAATAGCTCTGACCACCCCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: SWWPTDKTVKENTMG*PLGQWEIALTTPTQ Trigger: CTGTGTGGGGGTGGTCAGAGCTATTTCCCACTGGCCCAGTGGTCATCCCATGGTGTTCTCTTTGACGGTCTTGTCCGTGGGCCACCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655692.1 |
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| CDS GCA 90 bp | CTCACCTCTCTCTACTTCCCAGACATCACGCCCAGGGAACCTGCATaGACCCACCCTTGTGGGACACAAAGCCCCAGATCTCCAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LTSLYFPDITPREPA*THPCGTQSPRSPED Trigger: GTCCTCTGGAGATCTGGGGCTTTGTGTCCCACAAGGGTGGGTGCATGCAGGTTCCCTGGGCGTGATGTCTGGGAAGTAGAGAGAGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CCA 90 bp | GAAGTCTCCCATGTCTGGACCCCGAATCTTGTGCAGATTGAACAGTaGATCCGGGGTGCTCTGAGCAGGCAGCAGGGAGCAGCTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: EVSHVWTPNLVQIEQ*IRGALSRQQGAALV Trigger: CACCAGAGCTGCTCCCTGCTGCCTGCTCAGAGCACCCCGGATCCACTGTTCAATCTGCACAAGATTCGGGGTCCAGACATGGGAGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 87 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000423536.6 ENST00000436764.6 ENST00000449469.5 ENST00000456953.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653697.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654183.1 ENST00000654389.1 ENST00000654853.1 ENST00000655198.1 ENST00000655311.1 ENST00000655520.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657429.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658141.1 ENST00000658324.1 ENST00000658455.1 ENST00000658488.1 ENST00000658905.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000662572.1 ENST00000662982.1 ENST00000663187.1 ENST00000663534.1 ENST00000663540.1 ENST00000663784.1 ENST00000663955.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665693.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666549.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS CCA 90 bp | TGGGAAAAATCAAGATGTCTGCAGATTTCGAGAGATGGGGTGCGGTaGCGTGCGATGGCGAAGGACGGCGAGGGACGGCGAAGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: WEKSRCLQISRDGVR*RAMAKDGEGRRRTE Trigger: CTCAGTCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTGATTTTTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 40 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CCA 90 bp | GAGGGTGTCACATGTCCCTGTGGGCCTCAGTGGAAGAGCAAGCAATaGGAAGCAGCCTCTGCCTCCCCTCTAGTGACCTCAAAGCCTTCG | + |
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Preference number: 5 (lower is better) Translates to: EGVTCPCGPQWKSKQ*EAASASPLVTSKPS Trigger: CGAAGGCTTTGAGGTCACTAGAGGGGAGGCAGAGGCTGCTTCCCATTGCTTGCTCTTCCACTGAGGCCCACAGGGACATGTGACACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS TCA 90 bp | GAGACCCACGCAGATTTCCGGAGGCTCTTCCTCTGCAACAGCCACTaGAAGCATGTGAGGGACAGCCCCACAGCAGGACAGAACGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: ETHADFRRLFLCNSH*KHVRDSPTAGQNVE Trigger: TTCCACGTTCTGTCCTGCTGTGGGGCTGTCCCTCACATGCTTTCAGTGGCTGTTGCAGAGGAAGAGCCTCCGGAAATCTGCGTGGGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000653343.1 ENST00000653938.1 ENST00000654092.1 ENST00000654389.1 ENST00000654853.1 ENST00000656320.1 ENST00000657665.1 ENST00000658488.1 ENST00000659186.1 ENST00000659753.1 ENST00000660189.1 ENST00000663540.1 ENST00000665003.1 ENST00000665735.1 ENST00000666268.1 ENST00000667188.1 ENST00000667835.1 ENST00000667912.1 ENST00000669033.1 ENST00000670051.1 |
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| CDS GCA 90 bp | GCAGCTCTGGTGACGCTTCATGTGGTAGCCTCACTCTCCATTCTCTaGCCCTCTCGTGCCCACAAACACCACCAAGAGATTCACGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: AALVTLHVVASLSIL*PSRAHKHHQEIHGE Trigger: CTCACCGTGAATCTCTTGGTGGTGTTTGTGGGCACGAGAGGGGCAGAGAATGGAGAGTGAGGCTACCACATGAAGCGTCACCAGAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 85 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000423536.6 ENST00000436764.6 ENST00000449469.5 ENST00000456953.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653697.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654183.1 ENST00000654389.1 ENST00000654853.1 ENST00000655198.1 ENST00000655311.1 ENST00000655520.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657429.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658141.1 ENST00000658455.1 ENST00000658488.1 ENST00000658905.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000662572.1 ENST00000662982.1 ENST00000663187.1 ENST00000663534.1 ENST00000663540.1 ENST00000663784.1 ENST00000663955.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665693.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666549.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS GCA 90 bp | CCGTGCAGAGGCTGCTGCCGTAAATCCCTCAGTGATCTTCTCCCCTaGCTGTCTCTGGTCCTTGATTCCTTTCCCACAAGCTGGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: PCRGCCRKSLSDLLP*LSLVLDSFPTSWRE Trigger: TTCCCTCCAGCTTGTGGGAAAGGAATCAAGGACCAGAGACAGGCAGGGGAGAAGATCACTGAGGGATTTACGGCAGCAGCCTCTGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659400.1 ENST00000660189.1 |
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| CDS GCA 90 bp | CTTGGATCTAAGGCTGAGACCTTGCGGACCCATGGTCCAGCGCCCTaGTACTATGAAGACAACACATCCCATGGAGCCTCTGCACACAGC | + |
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Preference number: 5 (lower is better) Translates to: LGSKAETLRTHGPAP*YYEDNTSHGASAHS Trigger: GCTGTGTGCAGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTCTCAGCCTTAGATCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000655311.1 ENST00000658076.1 ENST00000658324.1 ENST00000658905.1 ENST00000660558.1 ENST00000662982.1 ENST00000663534.1 ENST00000663955.1 ENST00000665693.1 |
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| CDS GCA 90 bp | TTACCTCACCTCTCTCTACTTCCCAGACATCACGCCCAGGGAACCTaGATGCACCCACCCTTGTGGGACACAAAGCCCCAGATCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LPHLSLLPRHHAQGT*MHPPLWDTKPQISR Trigger: TCTGGAGATCTGGGGCTTTGTGTCCCACAAGGGTGGGTGCATGCAGGTTCCCTGGGCGTGATGTCTGGGAAGTAGAGAGAGGTGAGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CCA 90 bp | ACACAAAGCCCCAGATCTCCAGAGGACAGACCTCATAGAACACCATaGTCCACCTGCTTCCTGGCAGGGTGGAGATACCTCTCATGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TQSPRSPEDRPHRTP*STCFLAGWRYLSWA Trigger: GGCCCATGAGAGGTATCTCCACCCTGCCAGGAAGCAGGTGGACCATGGTGTTCTATGAGGTCTGTCCTCTGGAGATCTGGGGCTTTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS TCA 90 bp | TTTACCCACGCAGATTTCCGGAGGCTCTTCCTCTGCAACAGCCACTaGAAGCATGTGAGGGACAGCCCCACAGCAGGACAGAACGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: FTHADFRRLFLCNSH*KHVRDSPTAGQNVE Trigger: TTCCACGTTCTGTCCTGCTGTGGGGCTGTCCCTCACATGCTTTCAGTGGCTGTTGCAGAGGAAGAGCCTCCGGAAATCTGCGTGGGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 36 transcripts: ENST00000414142.5 ENST00000651115.2 ENST00000653277.1 ENST00000653753.1 ENST00000654008.1 ENST00000655692.1 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000658455.1 ENST00000659102.1 ENST00000659400.1 ENST00000660064.1 ENST00000660885.1 ENST00000661252.1 ENST00000662568.1 ENST00000663187.1 ENST00000663784.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000667412.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS TCA 90 bp | GACCTCTCAATCGGGGTGGGATGGGCTAGACGGCGGCTGCATCAGTaGCTTCCCCTTGGTCCTCCCTCTCTAGCTTTATTCCTGATCTTA | + |
|
Preference number: 5 (lower is better) Translates to: DLSIGVGWARRRLHQ*LPLGPPSLALFLIL Trigger: TAAGATCAGGAATAAAGCTAGAGAGGGAGGACCAAGGGGAAGTCACTGATGCAGCCGCCGTCTAGCCCATCCCACCCCGATTGAGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS TCA 90 bp | CAAAAATCCCACCTTGCGGACCCATGGTCCAGCGCCCTGCTACTATaGAGACAACACATCCCATGGAGCCTCTGCACACAGCAGACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKSHLADPWSSALLL*RQHIPWSLCTQQTH Trigger: ATGGGTCTGCTGTGTGCAGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 90 bp | GAGAGAACAGGCGAAACTCTTGGGTGGGAAGTGAGGGAAGTGTTTTaGCTCTCAGAACCCGGCTGTGCTCCCCTTGCAGCAATGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: ERTGETLGWEVREVF*LSEPGCAPLAAMST Trigger: AGTGCTCATTGCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCCTGTTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS GCA 90 bp | CAACAGTCCAAAAATCCCACCTTGCGGACCCATGGTCCAGCGCCCTaGTACTATGAAGACAACACATCCCATGGAGCCTCTGCACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQSKNPTLRTHGPAP*YYEDNTSHGASAHS Trigger: GCTGTGTGCAGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTTGGACTGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS CCA 90 bp | GCTGCTGCCGTAAATCCCTCAGTGATCTTCTCCCCTGCCTGTCTCTaGTCCTTGATTCCTTTCCCACAAGCTGGAGGGAAAATCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAVNPSVIFSPACL*SLIPFPQAGGKILP Trigger: GGGGAGGATTTTCCCTCCAGCTTGTGGGAAAGGAATCAAGGACCAGAGACAGGCAGGGGAGAAGATCACTGAGGGATTTACGGCAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659400.1 ENST00000660189.1 |
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| CDS CCA 90 bp | AAGGAGGGGCCAGCTCCAATCCAGCTTTCCCAGGGAAGAGGAGTCTaGATCTGGGAATCCATAGGACATGGCTCCTCTTCTCATCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KEGPAPIQLSQGRGV*IWESIGHGSSSHPH Trigger: GTGAGGATGAGAAGAGGAGCCATGTCCTATGGATTCCCAGATCCAGACTCCTCTTCCCTGGGAAAGCTGGATTGGAGCTGGCCCCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000660064.1 |
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| CDS CCA 90 bp | AATCTTTCATGTGGCAGCCAAGCAAGCGCCGGACTCCTCAAGGGCTaGCAGGAGAGCAACAGGAGTTGTGTGAAAGCTTCAGGGTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLSCGSQASAGLLKG*QESNRSCVKASGFG Trigger: TCCGAACCCTGAAGCTTTCACACAACTCCTGTTGCTCTCCTGCCAGCCCTTGAGGAGTCCGGCGCTTGCTTGGCTGCCACATGAAAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653277.1 ENST00000653343.1 ENST00000654092.1 ENST00000655198.1 ENST00000667412.1 ENST00000667835.1 |
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| CDS CCA 90 bp | CAATGCACACCTCAGAGGGTCGAGAGAACAGGCGAAACTCTTGGGTaGGAAGTGAGGGAAGTGTTTTGCCTCTCAGAACCCGGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QCTPQRVERTGETLG*EVREVFCLSEPGCA Trigger: AGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCCTGTTCTCTCGACCCTCTGAGGTGTGCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CCA 90 bp | ACACCAATGCACACCTCAGAGGGTCGAGAGAACAGGCGAAACTCTTaGGTGGGAAGTGAGGGAAGTGTTTTGCCTCTCAGAACCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPMHTSEGRENRRNS*VGSEGSVLPLRTRL Trigger: CAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCCTGTTCTCTCGACCCTCTGAGGTGTGCATTGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CCA 90 bp | ACAATTTCCACAGGTTCAGCTTGGTGCAGGGGCTGGATAAGGACGTaGAAGGAGAGGTGTGGAGGCAGAGAAAGCTTCCGGGAGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TISTGSAWCRGWIRT*KERCGGRESFREEG Trigger: TCCTTCCTCCCGGAAGCTTTCTCTGCCTCCACACCTCTCCTTCCACGTCCTTATCCAGCCCCTGCACCAAGCTGAACCTGTGGAAATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659400.1 ENST00000660189.1 |
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| CDS TCA 90 bp | CGGAACCTGCCCCAACCAGGAGAAGTAAAGGAAAGACCCTCCAGATaGGAAAGCTGGCAGACTTCTTCGGACGTGGAAGATAGGGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: RNLPQPGEVKERPSR*ESWQTSSDVEDRDG Trigger: ACCGTCCCTATCTTCCACGTCCGAAGAAGTCTGCCAGCTTTCTCATCTGGAGGGTCTTTCCTTTACTTCTCCTGGTTGGGGCAGGTTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS TCA 90 bp | GCCAGCACAAAAGGCAGAGGAATTAAGAGCTGGAATGGTGGCCAGTaGGTGACACCAATGCACACCTCAGAGGGTCGAGAGAACAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASTKGRGIKSWNGGQ*VTPMHTSEGRENRR Trigger: TCGCCTGTTCTCTCGACCCTCTGAGGTGTGCATTGGTGTCACTCACTGGCCACCATTCCAGCTCTTAATTCCTCTGCCTTTTGTGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS TCA 90 bp | CTCCCTGCCAGAAGCAGAAAGGAAGGCAAACATGGGCAGAAATATTaGGAATCCTGGGGCTCTTCTCAAAGACTGGGCTGGCCGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPARSRKEGKHGQKY*ESWGSSQRLGWPGA Trigger: TGCACCCGGCCAGCCCAGTCTTTGAGAAGAGCCCCAGGATTCTCAATATTTCTGCCCATGTTTGCCTTCCTTTCTGCTTCTGGCAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658141.1 ENST00000662568.1 ENST00000665440.1 |
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| CDS TCA 90 bp | CTCTGCCTCCCCTCTAGTGACCTCAAAGCCTTCGTCCTTGCGGCCTaGACACCAGTGCATTCTCTAGAGAAGCACCCAGGATTCATACCT | + |
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Preference number: 5 (lower is better) Translates to: LCLPSSDLKAFVLAA*TPVHSLEKHPGFIP Trigger: AGGTATGAATCCTGGGTGCTTCTCTAGAGAATGCACTGGTGTTCAGGCCGCAAGGACGAAGGCTTTGAGGTCACTAGAGGGGAGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS GCA 90 bp | CCACAGCAGGACAGAACGTGGAACCACGGGATACCACTTTCACCTTaGTTCCCCTACATCATCCAAGCCCCAGGAACAGCACATGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQQDRTWNHGIPLSP*FPYIIQAPGTAHDS Trigger: AGAGTCATGTGCTGTTCCTGGGGCTTGGATGATGTAGGGGAAGCAAGGTGAAAGTGGTATCCCGTGGTTCCACGTTCTGTCCTGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 64 transcripts: ENST00000414142.5 ENST00000436764.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654389.1 ENST00000654853.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000658455.1 ENST00000658488.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660885.1 ENST00000661252.1 ENST00000662568.1 ENST00000663187.1 ENST00000663540.1 ENST00000663784.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS GCA 90 bp | CCACAGCAGGACAGAACGTGGAACCACGGGATACCACTTTCACCTTaGTTCCCCTACATCATCCAAGCCCCAGGAACAGCACATGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQQDRTWNHGIPLSP*FPYIIQAPGTAHDS Trigger: TGAGTCATGTGCTGTTCCTGGGGCTTGGATGATGTAGGGGAAGCAAGGTGAAAGTGGTATCCCGTGGTTCCACGTTCTGTCCTGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657665.1 |
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| CDS CCA 90 bp | AGCAGTACACTGAAGGGGACTCTGAACCTAGGACAGGTTCTGGTGTaGCACACCAGCGTGGCGCAGTCTAGCATACACAGTAAGGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTLKGTLNLGQVLV*HTSVAQSSIHSKGY Trigger: ATAGCCCTTACTGTGTATGCTAGACTGCGCCACGCTGGTGTGCCACACCAGAACCTGTCCTAGGTTCAGAGTCCCCTTCAGTGTACTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS TCA 90 bp | CAGGAGGTGAATGTACTGACAGCTTGTCTAGCCCATCCTGGTCACTaGCACAGTCCCCTGAGGTCATCCCGTCTGAAATGGACAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QEVNVLTACLAHPGH*HSPLRSSRLKWTMV Trigger: CACCATTGTCCATTTCAGACGGGATGACCTCAGGGGACTGTGTCAGTGACCAGGATGGGCTAGACAAGCTGTCAGTACATTCACCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654853.1 ENST00000655692.1 ENST00000663534.1 |
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| CDS TCA 90 bp | AGCCTCTGGCTGTGGGTTCTGGCTCTTGGCATCAACTCACCACGGTaGGAAATATCAGCAAACCCAGATCCCAGATCACCAACTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: SLWLWVLALGINSPR*EISANPDPRSPTPW Trigger: CCATGGAGTTGGTGATCTGGGATCTGGGTTTGCTGATATTTCTCACCGTGGTGAGTTGATGCCAAGAGCCAGAACCCACAGCCAGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658324.1 ENST00000668482.1 |
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| CDS GCA 90 bp | GCAGCTCTGGTGACGCTTCATGTGGTAGCCTCACTCTCCATTCTCTaGCCCTCTCGTGCCCACAAACACCACCAAGAGATTCTGAAACAA | + |
|
Preference number: 5 (lower is better) Translates to: AALVTLHVVASLSIL*PSRAHKHHQEILKQ Trigger: TTGTTTCAGAATCTCTTGGTGGTGTTTGTGGGCACGAGAGGGGCAGAGAATGGAGAGTGAGGCTACCACATGAAGCGTCACCAGAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658324.1 ENST00000668482.1 |
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| CDS CCA 90 bp | ATGAACCCTCAGAAGTCAGGGGGTGGGTCTAGTCACCACATCACATaGGCCCACAAAGGCCCAAGCTCTGAAAGCCTAGTTGGAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MNPQKSGGGSSHHIT*AHKGPSSESLVGKR Trigger: CCTTTTTCCAACTAGGCTTTCAGAGCTTGGGCCTTTGTGGGCCCATGTGATGTGGTGACTAGACCCACCCCCTGACTTCTGAGGGTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS CCA 90 bp | AGTTCTCACGTGTGCCCTTCACTGCTATCTGAATTCATTCCAGCGTaGGGCCCAGAGAGAAATGCAGACTGGTTTCTGGCAGGAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHVCPSLLSEFIPA*GPERNADWFLAGGS Trigger: GGATCCTCCTGCCAGAAACCAGTCTGCATTTCTCTCTGGGCCCCACGCTGGAATGAATTCAGATAGCAGTGAAGGGCACACGTGAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS CCA 90 bp | CCAGGGCTTGTTGAAATTGGAGACCAACGTCAGAAGCCTGAAAAATaGCCTGAGCCAGGACAGTGGCACAGCAGAGCACAGGATGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: PGLVEIGDQRQKPEK*PEPGQWHSRAQDEA Trigger: TGCTTCATCCTGTGCTCTGCTGTGCCACTGTCCTGGCTCAGGCCATTTTTCAGGCTTCTGACGTTGGTCTCCAATTTCAACAAGCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CCA 90 bp | CATAAACACGGACCAGCTGAGCCTCTGGCTGTGGGTTCTGGCTCTTaGCATCAACTCACCACGGTGAGAAATATCAGCAAACCCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: HKHGPAEPLAVGSGS*HQLTTVRNISKPRS Trigger: GGATCTGGGTTTGCTGATATTTCTCACCGTGGTGAGTTGATGCCAAGAGCCAGAACCCACAGCCAGAGGCTCAGCTGGTCCGTGTTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658324.1 ENST00000668482.1 |
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| CDS CCA 90 bp | AGATTCAAAACAGGTCAGATGGCCCTTGGCTGGCATCTGGGAACTTaGCTCTCGGGATGTTCCTGGAACAGAACAGCTGACAGGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RFKTGQMALGWHLGT*LSGCSWNRTADRAM Trigger: CATTGCCCTGTCAGCTGTTCTGTTCCAGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663784.1 |
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| CDS TCA 90 bp | AAAGCCCGTGATTCGCAGTTCTCACGTGTGCCCTTCACTGCTATCTaGATTCATTCCAGCGTGGGGCCCAGAGAGAAATGCAGACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KARDSQFSRVPFTAI*IHSSVGPREKCRLV Trigger: AACCAGTCTGCATTTCTCTCTGGGCCCCACGCTGGAATGAATTCAGATAGCAGTGAAGGGCACACGTGAGAACTGCGAATCACGGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS TCA 90 bp | GAAGACAACACATCCCATGGAGCCTCTGCACACAGCAGACCCATCTaGAACAGACACAGAGAACACTTAACGCAGGGGCTGGCAGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: EDNTSHGASAHSRPI*NRHREHLTQGLADH Trigger: ATGATCTGCCAGCCCCTGCGTTAAGTGTTCTCTGTGTCTGTTTCAGATGGGTCTGCTGTGTGCAGAGGCTCCATGGGATGTGTTGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655311.1 ENST00000658324.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS TCA 90 bp | CAGTACTCCTCCCACTTCAACAAACTATGCCAATCCACACTAGGATaGCTCAGAGCCCAAGGGGAGCTCTGTAAGCCCCACCGTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QYSSHFNKLCQSTLG*LRAQGELCKPHRDS Trigger: TGAATCACGGTGGGGCTTACAGAGCTCCCCTTGGGCTCTGAGTCATCCTAGTGTGGATTGGCATAGTTTGTTGAAGTGGGAGGAGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS GCA 90 bp | TGGGTGGGAAGTGAGGGAAGTGTTTTGCCTCTCAGAACCCGGCTGTaGTCCCCTTGCAGCAATGAGCACTTTCTCTTTCTTACGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVGSEGSVLPLRTRL*SPCSNEHFLFLTTN Trigger: GTTTGTCGTAAGAAAGAGAAAGTGCTCATTGCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CCA 90 bp | TGTATCAGGAAATTGAGATTCAAAACAGGTCAGATGGCCCTTGGCTaGCATCTGGGAACTTGGCTCTCGGGATGTTCCTGGGACCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CIRKLRFKTGQMALG*HLGTWLSGCSWDLR Trigger: CCTGAGGTCCCAGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATCTCAATTTCCTGATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000414142.5 ENST00000651115.2 ENST00000653697.1 ENST00000656320.1 ENST00000657216.1 ENST00000657843.1 ENST00000658905.1 ENST00000660558.1 ENST00000661252.1 ENST00000664636.1 ENST00000666331.1 ENST00000669033.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CCA 90 bp | AAACCCAGATCCCAGATCACCAACTCCATGGTCTTAGGACTTCCTTaGACTGTCCTTGGATCTAAGGCTGAGACGCAGATTTCCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPRSQITNSMVLGLP*TVLGSKAETQISGG Trigger: GCCTCCGGAAATCTGCGTCTCAGCCTTAGATCCAAGGACAGTCCAAGGAAGTCCTAAGACCATGGAGTTGGTGATCTGGGATCTGGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000436764.6 ENST00000657843.1 ENST00000659255.1 ENST00000664073.1 ENST00000664964.1 ENST00000666331.1 ENST00000666419.1 ENST00000669480.1 ENST00000670958.1 |
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| CDS CCA 90 bp | AAACCCAGATCCCAGATCACCAACTCCATGGTCTTAGGACTTCCTTaGACTGTCCTTGGATCTAAGGCTGAGACCCACGCAGATTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KPRSQITNSMVLGLP*TVLGSKAETHADFR Trigger: CCGGAAATCTGCGTGGGTCTCAGCCTTAGATCCAAGGACAGTCCAAGGAAGTCCTAAGACCATGGAGTTGGTGATCTGGGATCTGGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000653343.1 ENST00000653938.1 ENST00000654092.1 ENST00000654389.1 ENST00000654853.1 ENST00000656320.1 ENST00000657665.1 ENST00000658488.1 ENST00000659186.1 ENST00000659753.1 ENST00000660189.1 ENST00000663540.1 ENST00000665003.1 ENST00000665735.1 ENST00000666268.1 ENST00000667188.1 ENST00000667835.1 ENST00000667912.1 ENST00000669033.1 ENST00000670051.1 |
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| CDS CCA 90 bp | AAACCCAGATCCCAGATCACCAACTCCATGGTCTTAGGACTTCCTTaGACTGTCCTTGGATCTAAGGCTGAGACCTTGCGGACCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPRSQITNSMVLGLP*TVLGSKAETLRTHG Trigger: ACCATGGGTCCGCAAGGTCTCAGCCTTAGATCCAAGGACAGTCCAAGGAAGTCCTAAGACCATGGAGTTGGTGATCTGGGATCTGGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000655311.1 ENST00000658076.1 ENST00000658324.1 ENST00000658905.1 ENST00000660558.1 ENST00000662982.1 ENST00000663534.1 ENST00000663955.1 ENST00000665693.1 |
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| CDS CCA 90 bp | TGTATCAGGAAATTGAGATTCAAAACAGGTCAGATGGCCCTTGGCTaGCATCTGGGAACTTGGCTCTCGGGATGTTCCACTCCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CIRKLRFKTGQMALG*HLGTWLSGCSTPCQ Trigger: CTGGCAGGGAGTGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATCTCAATTTCCTGATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653753.1 |
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| CDS CCA 90 bp | AAGCCCTGGATGAGCTATCTAGACATCACCTGGTCAAACCCGTTCTaGAAAGGACAAGGAGAGTACTGGCACAGAAGCCACCAGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPWMSYLDITWSNPF*KGQGEYWHRSHQVV Trigger: TACCACCTGGTGGCTTCTGTGCCAGTACTCTCCTTGTCCTTTCCAGAACGGGTTTGACCAGGTGATGTCTAGATAGCTCATCCAGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CCA 90 bp | CAATATCCTCTGAGCCAAGGAAGAGTGAAAATCAGATCTGGCCTATaGCCTACCTTCTCCAAAGCCAGCCTGGCAGGCTCACAGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QYPLSQGRVKIRSGL*PTFSKASLAGSQVV Trigger: GACAACCTGTGAGCCTGCCAGGCTGGCTTTGGAGAAGGTAGGCCATAGGCCAGATCTGATTTTCACTCTTCCTTGGCTCAGAGGATATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS TCA 90 bp | CAGTCATGTGACACTCCTGCAGGGCACAAGAAGCCAAGATGTGACTaGTGCACTTGGCACTGCTTATGGCAAGTCCAGGAAACCACGATA | + |
|
Preference number: 5 (lower is better) Translates to: QSCDTPAGHKKPRCD*CTWHCLWQVQETTI Trigger: TATCGTGGTTTCCTGGACTTGCCATAAGCAGTGCCAAGTGCATCAGTCACATCTTGGCTTCTTGTGCCCTGCAGGAGTGTCACATGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654853.1 ENST00000655692.1 ENST00000663534.1 |
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| CDS TCA 90 bp | CAATGCTGGCATTCCGGGCAATGGTCTCACCTGGAACAGAACAGCTaGCAGGGCAATGAGCAGACTTACAGCCTAAGATTACAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCWHSGQWSHLEQNS*QGNEQTYSLRLQML Trigger: CAGCATCTGTAATCTTAGGCTGTAAGTCTGCTCATTGCCCTGTCAGCTGTTCTGTTCCAGGTGAGACCATTGCCCGGAATGCCAGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659400.1 |
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| CDS GCA 90 bp | TTCACATTTCATGAAGCAAAGCCCGTGATTCGCAGTTCTCACGTGTaGCCTTCACTGCTATCTGAATTCATTCCAGCGTGGGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FTFHEAKPVIRSSHV*PSLLSEFIPAWGPE Trigger: CTCTGGGCCCCACGCTGGAATGAATTCAGATAGCAGTGAAGGGCACACGTGAGAACTGCGAATCACGGGCTTTGCTTCATGAAATGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS GCA 90 bp | AAATTCCAGAGATGGACAAGAAACCTTACCTCGGGCCCTGCGGTCTaGCACTCTCCTGCAACACCTCTCACTAAGCATCTCTACAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KFQRWTRNLTSGPAV*HSPATPLTKHLYSV Trigger: AACACTGTAGAGATGCTTAGTGAGAGGTGTTGCAGGAGAGTGGCAGACCGCAGGGCCCGAGGTAAGGTTTCTTGTCCATCTCTGGAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449469.5 ENST00000654389.1 |
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| CDS GCA 90 bp | ACACACACACACACACACACACACACACACACACGGGGTCAGCCCTaGTCACCCCAACCTCAAAGTCTCCCTCATGTTTATATGCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHTHTRGQP*SPQPQSLPHVYMPI Trigger: TATTGGCATATAAACATGAGGGAGACTTTGAGGTTGGGGTGAGCAGGGCTGACCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS CCA 90 bp | AAACCCAGATCCCAGATCACCAACTCCATGGTCTTAGGACTTCCTTaGACTGTCCTTGGATCTAAGGCTGAGACCTTACAAGCACCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPRSQITNSMVLGLP*TVLGSKAETLQAPQ Trigger: CTGCGGTGCTTGTAAGGTCTCAGCCTTAGATCCAAGGACAGTCCAAGGAAGTCCTAAGACCATGGAGTTGGTGATCTGGGATCTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000449469.5 ENST00000456953.6 ENST00000654183.1 ENST00000655198.1 ENST00000655520.1 ENST00000657429.1 |
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| CDS CCA 90 bp | CCTCAAACAATATCCTCTGAGCCAAGGAAGAGTGAAAATCAGATCTaGCCTATGGCCTACCTTCTCCAAAGCCAGCCTGGCAGGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: PQTISSEPRKSENQI*PMAYLLQSQPGRLT Trigger: TGTGAGCCTGCCAGGCTGGCTTTGGAGAAGGTAGGCCATAGGCCAGATCTGATTTTCACTCTTCCTTGGCTCAGAGGATATTGTTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS GCA 90 bp | TATCCGCTTCATCTGTCAGGCCAACTGTTACTAAGTTCAAGAGGATaGTGGGGCCATGATGATCTTGGGATGTGCTGTTTCTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YPLHLSGQLLLSSRG*WGHDDLGMCCFSSS Trigger: GCTGCTGGAGAAACAGCACATCCCAAGATCATCATGGCCCCAGCATCCTCTTGAACTTAGTAACAGTTGGCCTGACAGATGAAGCGGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659400.1 ENST00000660189.1 |
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| CDS CCA 90 bp | TCTGCCAGAATCAAGAAGCCCTGGATGAGCTATCTAGACATCACCTaGTCAAACCCGTTCTGGAAAGGACAAGGAGAGTACTGGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SARIKKPWMSYLDIT*SNPFWKGQGEYWHR Trigger: TCTGTGCCAGTACTCTCCTTGTCCTTTCCAGAACGGGTTTGACCAGGTGATGTCTAGATAGCTCATCCAGGGCTTCTTGATTCTGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS TCA 90 bp | TCCACTGCGACACACCATGACTCATTACATATCACATTCCCTTCCTaGTCTACCCCTCAGAACACAGAGCCTGGTTTCTGCAAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: STATHHDSLHITFPS*STPQNTEPGFCKER Trigger: CCTCTCTTTGCAGAAACCAGGCTCTGTGTTCTGAGGGGTAGATCAGGAAGGGAATGTGATATGTAATGAGTCATGGTGTGTCGCAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS TCA 90 bp | ACTCTTCTATCAGCCATGCCTAGCTATACCTCTGGCTTTGGTCGCTaGCATCACAATGACAATCCTGTGGGGAAATTAATCCTGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLLSAMPSYTSGFGR*HHNDNPVGKLILVA Trigger: GGCCACCAGGATTAATTTCCCCACAGGATTGTCATTGTGATGTCAGCGACCAAAGCCAGAGGTATAGCTAGGCATGGCTGATAGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655692.1 |
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| CDS CCA 90 bp | AAACCCAGATCCCAGATCACCAACTCCATGGTCTTAGGACTTCCTTaGACTGTCCTTGGATCTAAGGCTGAGACTTTACCCACGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: KPRSQITNSMVLGLP*TVLGSKAETLPTQI Trigger: AATCTGCGTGGGTAAAGTCTCAGCCTTAGATCCAAGGACAGTCCAAGGAAGTCCTAAGACCATGGAGTTGGTGATCTGGGATCTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000651115.2 ENST00000653277.1 ENST00000653753.1 ENST00000654008.1 ENST00000655692.1 ENST00000658455.1 ENST00000659102.1 ENST00000659400.1 ENST00000660064.1 ENST00000660885.1 ENST00000661252.1 ENST00000662568.1 ENST00000663187.1 ENST00000663784.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000667412.1 ENST00000668054.1 ENST00000669114.1 ENST00000669137.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS CCA 90 bp | AAACCCAGATCCCAGATCACCAACTCCATGGTCTTAGGACTTCCTTaGACTGTCCTTGGATCTAAGGCTGAGACCTGCAACTTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KPRSQITNSMVLGLP*TVLGSKAETCNFLH Trigger: ATGGAGAAAGTTGCAGGTCTCAGCCTTAGATCCAAGGACAGTCCAAGGAAGTCCTAAGACCATGGAGTTGGTGATCTGGGATCTGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666549.1 |
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| CDS GCA 90 bp | GTCAGCCCTGCTCACCCCAACCTCAAAGTCTCCCTCATGTTTATATaGCAATATTGCACTTATTCGAAACTGTGCTATCCACTGCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: VSPAHPNLKVSLMFI*QYCTYSKLCYPLRH Trigger: GTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGACTTTGAGGTTGGGGTGAGCAGGGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS GCA 90 bp | GATGCAAAGAAACATATTCCAGACAACAGTCCAAAAATCCCACCTTaGGGACCCATGGTCCAGCGCCCTGCTACTATGAAGACAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: DAKKHIPDNSPKIPP*GPMVQRPATMKTTH Trigger: ATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTTGGACTGTTGTCTGGAATATGTTTCTTTGCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 90 bp | CCCTACATCATCCAAGCCCCAGGAACAGCACATGACTCTGCAGGATaGAAAGAAACATATTCCAGACAACAGTCCAAAAATCCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PYIIQAPGTAHDSAG*KETYSRQQSKNPTL Trigger: CAAGGTGGGATTTTTGGACTGTTGTCTGGAATATGTTTCTTTGCATCCTGCAGAGTCATGTGCTGTTCCTGGGGCTTGGATGATGTAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS TCA 90 bp | GCAGGTTTCAGCTGCTCCTCACACACACTAAAAACGGTGACTATGTaGGATAACAGACATGCTCATCGGCTTCACCATAGTAACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGFSCSSHTLKTVTM*DNRHAHRLHHSNHC Trigger: ACAGTGGTTACTATGGTGAAGCCGATGAGCATGTCTGTTATCTCACATAGTCACCGTTTTTAGTGTGTGTGAGGAGCAGCTGAAACCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000657665.1 ENST00000662572.1 ENST00000663955.1 |
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| CDS TCA 90 bp | CTAGTAATACAGGCACAAGGCACCATGCCTAGGCCTTGCAATAAGTaGCTTTACCCTAATCTCCAAAGCCTGAACTTAAGAGTACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVIQAQGTMPRPCNK*LYPNLQSLNLRVPL Trigger: GAGGGGTACTCTTAAGTTCAGGCTTTGGAGATTAGGGTAAAGTCACTTATTGCAAGGCCTAGGCATGGTGCCTTGTGCCTGTATTACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS GCA 90 bp | ATTACAGATGCTGCTTCTGACTCCCAGAGATCACTTACCACTCCCTaGCAGAAGCAGAAAGGAAGGCAAACATGGGCAGAAATATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: ITDAASDSQRSLTTP*QKQKGRQTWAEILR Trigger: TCTCAATATTTCTGCCCATGTTTGCCTTCCTTTCTGCTTCTGGCAGGGAGTGGTAAGTGATCTCTGGGAGTCAGAAGCAGCATCTGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659400.1 |
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| CDS TCA 90 bp | TTGCCCAGGCTGCCGTTTTTCCTTTGTCCCACACTGTCAGAATACTaGCCATCTGGCAGACATAACAAAGTAGGGAACAAAATTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LPRLPFFLCPTLSEY*PSGRHNKVGNKIQT Trigger: TGTCTGAATTTTGTTCCCTACTTTGTTATGTCTGCCAGATGGTCAGTATTCTGACAGTGTGGGACAAAGGAAAAACGGCAGCCTGGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659400.1 ENST00000660189.1 |
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| CDS GCA 90 bp | GCTCACCCCAACCTCAAAGTCTCCCTCATGTTTATATGCCAATATTaGACTTATTCGAAACTGTGCTATCCACTGCGACACACCATGACT | + |
|
Preference number: 5 (lower is better) Translates to: AHPNLKVSLMFICQY*TYSKLCYPLRHTMT Trigger: AGTCATGGTGTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGACTTTGAGGTTGGGGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS GCA 90 bp | CATAACAAGGATCGCCACCAAGTCCAGAGAAAACCACTAGCTAATTaGCTGCCTCCAAAATGCAGTACTCCTCCCACTTCAACAAACTAT | + |
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Preference number: 5 (lower is better) Translates to: HNKDRHQVQRKPLAN*LPPKCSTPPTSTNY Trigger: ATAGTTTGTTGAAGTGGGAGGAGTACTGCATTTTGGAGGCAGGCAATTAGCTAGTGGTTTTCTCTGGACTTGGTGGCGATCCTTGTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS TCA 90 bp | GAACAAGAAAAACGTAACTCTAGGAAGAGGTCGGCAAACTATCTGTaGGAAAAATGGCATCTATGCTATCCTATGTGCCCACTCTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: EQEKRNSRKRSANYL*EKWHLCYPMCPLCA Trigger: AGCACAGAGTGGGCACATAGGATAGCATAGATGCCATTTTTCTCACAGATAGTTTGCCGACCTCTTCCTAGAGTTACGTTTTTCTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000655311.1 ENST00000658324.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS TCA 90 bp | GACCTGTCTCACTCCATAATCTACCCTGACTATTCTGCAATGCCCTaGATTATCATGGGTCCTAAATGCCTAAATGTGAACCAACTACCA | + |
|
Preference number: 5 (lower is better) Translates to: DLSHSIIYPDYSAMP*IIMGPKCLNVNQLP Trigger: TGGTAGTTGGTTCACATTTAGGCATTTAGGACCCATGATAATTCAGGGCATTGCAGAATAGTCAGGGTAGATTATGGAGTGAGACAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS TCA 90 bp | AATATTGCACTTATTCGAAACTGTGCTATCCACTGCGACACACCATaGCTCATTACATATCACATTCCCTTCCTGATCTACCCCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NIALIRNCAIHCDTP*LITYHIPFLIYPSE Trigger: TTCTGAGGGGTAGATCAGGAAGGGAATGTGATATGTAATGAGTCATGGTGTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS GCA 90 bp | GTCTCCCTCATGTTTATATGCCAATATTGCACTTATTCGAAACTGTaGTATCCACTGCGACACACCATGACTCATTACATATCACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSLMFICQYCTYSKL*YPLRHTMTHYISHS Trigger: GGAATGTGATATGTAATGAGTCATGGTGTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS GCA 72 bp | GAGAGAGGGCGCTGGCTGGTGCGAAGCCGTCCGAGGTaGAGCACAGCCCACAAGGCCCGGCGCCCTGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERGRWLVRSRPR*STAHKARRPGV Trigger: GACGCCAGGGCGCCGGGCCTTGTGGGCTGTGCTGCACCTCGGACGGCTTCGCACCAGCCAGCGCCCTCTCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 24 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000436764.6 ENST00000651115.2 ENST00000654008.1 ENST00000654183.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658488.1 ENST00000660558.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664626.1 ENST00000665233.1 ENST00000666331.1 ENST00000666419.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS GCA 72 bp | TCCCCCGATGGTGAGAGTGGAGCCGACCATGCGCCCTaGTGTGGACTCACCCGGCGCCCTGGCGTCGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPDGESGADHAP*CGLTRRPGVEW Trigger: CCACTCGACGCCAGGGCGCCGGGTGAGTCCACAGCAGGGCGCATGGTCGGCTCCACTCTCACCATCGGGGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 20 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000456953.6 ENST00000653697.1 ENST00000655520.1 ENST00000656023.1 ENST00000657843.1 ENST00000658076.1 ENST00000658905.1 ENST00000660885.1 ENST00000661252.1 ENST00000664073.1 ENST00000664636.1 ENST00000665181.1 ENST00000665735.1 ENST00000666268.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 |
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| CDS GCA 72 bp | GAGAGAGGGCGCTGGCTGGTGCGAAGCCGTCCGAGGTaGAGCACAGCCCACAAGGCCTGCCAGTGTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERGRWLVRSRPR*STAHKACQCLS Trigger: GGAAAGACACTGGCAGGCCTTGTGGGCTGTGCTGCACCTCGGACGGCTTCGCACCAGCCAGCGCCCTCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000424235.1 ENST00000456953.6 ENST00000653697.1 ENST00000657843.1 ENST00000658076.1 ENST00000658905.1 ENST00000660885.1 ENST00000661252.1 ENST00000664073.1 ENST00000664636.1 ENST00000665735.1 ENST00000666268.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 |
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| CDS CCA 72 bp | AGCACAGCCCACAAGGCCCGGCGCCCTGGCGTCGAGTaGCGGCGGAGACCTGACAGACAGCGTGGGAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: STAHKARRPGVE*RRRPDRQRGKN Trigger: ATTTTTCCCACGCTGTCTGTCAGGTCTCCGCCGCCACTCGACGCCAGGGCGCCGGGCCTTGTGGGCTGTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 24 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000436764.6 ENST00000651115.2 ENST00000654008.1 ENST00000654183.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658488.1 ENST00000660558.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664626.1 ENST00000665233.1 ENST00000666331.1 ENST00000666419.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CCA 72 bp | TGCAGATTTCGAGAGATGGGGTGCGGTGGCGTGCGATaGCGAAGGACGGCGAGGGACGGCGAAGGACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRFREMGCGGVR*RRTARDGEGLR Trigger: CCTCAGTCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 40 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS TCA 72 bp | TGCGATGGCGAAGGACGGCGAGGGACGGCGAAGGACTaGGGCCACACGACAAGGAAGCTACGCTCGTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CDGEGRRGTAKD*GHTTRKLRSFR Trigger: GCGAAACGAGCGTAGCTTCCTTGTCGTGTGGCCTCAGTCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000456953.6 ENST00000651115.2 ENST00000654008.1 ENST00000654183.1 ENST00000657868.1 ENST00000658488.1 ENST00000660558.1 ENST00000660885.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666419.1 ENST00000670958.1 |
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| CDS GCA 72 bp | ATGTCTGCAGATTTCGAGAGATGGGGTGCGGTGGCGTaGGATGGCGAAGGACGGCGAGGGACGGCGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MSADFERWGAVA*DGEGRRGTAKD Trigger: GTCCTTCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 41 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000436764.6 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CAA 90 bp | TGTCAGGGACTCTCAGAGCCCCAATCAAGCTCAGGGAGCACCTTCTaGGCAGCAGCCCCACGAAGGCAGAAGAGGGCCCAGGCCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CQGLSEPQSSSGSTF*AAAPRRQKRAQACP Trigger: GGGACAGGCCTGGGCCCTCTTCTGCCTTCGTGGGGCTGCTGCCAAGAAGGTGCTCCCTGAGCTTGATTGGGGCTCTGAGAGTCCCTGACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424235.1 |
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| CDS CCA 72 bp | TCAAGATGTCTGCAGATTTCGAGAGATGGGGTGCGGTaGCGTGCGATGGCGAAGGACGGCGAGGGACGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SRCLQISRDGVR*RAMAKDGEGRR Trigger: TCGCCGTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 41 transcripts: ENST00000413755.5 ENST00000424235.1 ENST00000436764.6 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
||
| CDS GCA 72 bp | GTCCAGCAAGCAGCTGGGGAGGTCGTGGGGAAGCCGTaGAGAGGCTGCTGCCGTAAATCCCTCAGTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VQQAAGEVVGKP*RGCCRKSLSDL Trigger: AAGATCACTGAGGGATTTACGGCAGCAGCCTCTGCACGGCTTCCCCACGACCTCCCCAGCTGCTTGCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659400.1 ENST00000660189.1 |
||
| CDS CCA 72 bp | CATCACGCCCAGGGAACCTGCATGCACCCACCCTTGTaGGACACAAAGCCCCAGATCTCCAGAGGACAGACC | + |
|
Preference number: 6 (lower is better) Translates to: HHAQGTCMHPPL*DTKPQISRGQT Trigger: GGTCTGTCCTCTGGAGATCTGGGGCTTTGTGTCCCACAAGGGTGGGTGCATGCAGGTTCCCTGGGCGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
||
| CDS CCA 72 bp | ACAGGTCAGATGGCCCTTGGCTGGCATCTGGGAACTTaGCTCTCGGGATGTTCCACTCCCTGCCAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TGQMALGWHLGT*LSGCSTPCQKQ Trigger: CTGCTTCTGGCAGGGAGTGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653753.1 |
||
| CDS CAA 72 bp | AGACATCACGCCCAGGGAACCTGCATGCACCCACCCTaGTGGGACACAAAGCCCCAGATCTCCAGAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: RHHAQGTCMHPP*WDTKPQISRGQ Trigger: CTGTCCTCTGGAGATCTGGGGCTTTGTGTCCCACAAGGGTGGGTGCATGCAGGTTCCCTGGGCGTGATGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
||
| CDS CAA 90 bp | CTCCTCAGCACCCAACCACCTCTGGCCTCACAACCTGCAGAGAACTaGAGCTCTAGAGGACTGAGCAGGACCCCACTTACCTGGGACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSTQPPLASQPAEN*SSRGLSRTPLTWDL Trigger: GAGGTCCCAGGTAAGTGGGGTCCTGCTCAGTCCTCTAGAGCTCAAGTTCTCTGCAGGTTGTGAGGCCAGAGGTGGTTGGGTGCTGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424235.1 |
||
| CDS CAA 90 bp | GGTGACAGAATGAGACCCTTACAAGCACCGCAGCTCAGCCTCTTCTaGAAGACACGTCACCTGGGGCCACTGGGCACACAGGACAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GDRMRPLQAPQLSLF*KTRHLGPLGTQDRG Trigger: ACCTCTGTCCTGTGTGCCCAGTGGCCCCAGGTGACGTGTCTTCAAGAAGAGGCTGAGCTGCGGTGCTTGTAAGGGTCTCATTCTGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000413755.5 ENST00000414142.5 ENST00000653753.1 ENST00000654008.1 ENST00000657216.1 ENST00000657868.1 ENST00000658455.1 ENST00000658488.1 ENST00000659255.1 ENST00000659753.1 ENST00000660064.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000665735.1 ENST00000667412.1 ENST00000667835.1 ENST00000668042.1 ENST00000668054.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
||
| CDS CAA 90 bp | GGATCTAAGGCTGAGACCTTACAAGCACCGCAGCTCAGCCTCTTCTaGAAGACACGTCACCTGGGGCCACTGGGCACACAGGACAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSKAETLQAPQLSLF*KTRHLGPLGTQDRG Trigger: ACCTCTGTCCTGTGTGCCCAGTGGCCCCAGGTGACGTGTCTTCAAGAAGAGGCTGAGCTGCGGTGCTTGTAAGGTCTCAGCCTTAGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000449469.5 ENST00000456953.6 ENST00000654183.1 ENST00000655198.1 ENST00000655520.1 ENST00000657429.1 |
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| CDS CAA 90 bp | GCACCCAGGATTCATACCTTACAAGCACCGCAGCTCAGCCTCTTCTaGAAGACACGTCACCTGGGGCCACTGGGCACACAGGACAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: APRIHTLQAPQLSLF*KTRHLGPLGTQDRG Trigger: ACCTCTGTCCTGTGTGCCCAGTGGCCCCAGGTGACGTGTCTTCAAGAAGAGGCTGAGCTGCGGTGCTTGTAAGGTATGAATCCTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665003.1 |
||
| CDS TCA 72 bp | GACCTTGCGGACCCATGGTCCAGCGCCCTGCTACTATaGAGACAACACATCCCATGGAGCCTCTGCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: DLADPWSSALLL*RQHIPWSLCTQ Trigger: CTGTGTGCAGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000655311.1 ENST00000658076.1 ENST00000658324.1 ENST00000658905.1 ENST00000660558.1 ENST00000662982.1 ENST00000663534.1 ENST00000663955.1 ENST00000665693.1 |
||
| CDS TCA 72 bp | ATCGGGGTGGGATGGGCTAGACGGCGGCTGCATCAGTaGCTTCCCCTTGGTCCTCCCTCTCTAGCTTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: IGVGWARRRLHQ*LPLGPPSLALF Trigger: GAATAAAGCTAGAGAGGGAGGACCAAGGGGAAGTCACTGATGCAGCCGCCGTCTAGCCCATCCCACCCCGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS TCA 72 bp | CACCTTGCGGACCCATGGTCCAGCGCCCTGCTACTATaGAGACAACACATCCCATGGAGCCTCTGCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: HLADPWSSALLL*RQHIPWSLCTQ Trigger: CTGTGTGCAGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 72 bp | CTCTACTTCCCAGACATCACGCCCAGGGAACCTGCATaGACCCACCCTTGTGGGACACAAAGCCCCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: LYFPDITPREPA*THPCGTQSPRS Trigger: AGATCTGGGGCTTTGTGTCCCACAAGGGTGGGTGCATGCAGGTTCCCTGGGCGTGATGTCTGGGAAGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS GCA 72 bp | GGCGAAACTCTTGGGTGGGAAGTGAGGGAAGTGTTTTaGCTCTCAGAACCCGGCTGTGCTCCCCTTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GETLGWEVREVF*LSEPGCAPLAA Trigger: TGCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CCA 72 bp | CATGTCTGGACCCCGAATCTTGTGCAGATTGAACAGTaGATCCGGGGTGCTCTGAGCAGGCAGCAGGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HVWTPNLVQIEQ*IRGALSRQQGA Trigger: TGCTCCCTGCTGCCTGCTCAGAGCACCCCGGATCCACTGTTCAATCTGCACAAGATTCGGGGTCCAGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 87 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000423536.6 ENST00000436764.6 ENST00000449469.5 ENST00000456953.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653697.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654183.1 ENST00000654389.1 ENST00000654853.1 ENST00000655198.1 ENST00000655311.1 ENST00000655520.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657429.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658141.1 ENST00000658324.1 ENST00000658455.1 ENST00000658488.1 ENST00000658905.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000662572.1 ENST00000662982.1 ENST00000663187.1 ENST00000663534.1 ENST00000663540.1 ENST00000663784.1 ENST00000663955.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665693.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666549.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS CCA 72 bp | TGTGGCAGCCAAGCAAGCGCCGGACTCCTCAAGGGCTaGCAGGAGAGCAACAGGAGTTGTGTGAAAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CGSQASAGLLKG*QESNRSCVKAS Trigger: TGAAGCTTTCACACAACTCCTGTTGCTCTCCTGCCAGCCCTTGAGGAGTCCGGCGCTTGCTTGGCTGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000653277.1 ENST00000653343.1 ENST00000654092.1 ENST00000655198.1 ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000667412.1 ENST00000667835.1 |
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| CDS CCA 72 bp | ACATGTCCCTGTGGGCCTCAGTGGAAGAGCAAGCAATaGGAAGCAGCCTCTGCCTCCCCTCTAGTGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TCPCGPQWKSKQ*EAASASPLVTS Trigger: TGAGGTCACTAGAGGGGAGGCAGAGGCTGCTTCCCATTGCTTGCTCTTCCACTGAGGCCCACAGGGACATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS CAA 72 bp | AGGCGAAACTCTTGGGTGGGAAGTGAGGGAAGTGTTTaGCCTCTCAGAACCCGGCTGTGCTCCCCTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRNSWVGSEGSV*PLRTRLCSPCS Trigger: GCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CAA 90 bp | CGAGAGAACAGGCGAAACTCTTGGGTGGGAAGTGAGGGAAGTGTTTaGCCTCTCAGAACCCGGCTGTGCTCCCCTTGCAGCAATGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RENRRNSWVGSEGSV*PLRTRLCSPCSNEH Trigger: GTGCTCATTGCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCCTGTTCTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS TCA 72 bp | TCCTCAAGGGCTGGCAGGAGAGCAACAGGAGTTGTGTaGAAGCTTCAGGGTTCGGATGGGATAGGGTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SSRAGRRATGVV*KLQGSDGIGWT Trigger: GGTCCACCCTATCCCATCCGAACCCTGAAGCTTTCACACAACTCCTGTTGCTCTCCTGCCAGCCCTTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000653277.1 ENST00000653343.1 ENST00000654092.1 ENST00000655198.1 ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000667412.1 ENST00000667835.1 |
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| CDS TCA 72 bp | CCCACGGACAAGACCGTCAAAGAGAACACCATGGGATaGCCACTGGGCCAGTGGGAAATAGCTCTGACCACC | + |
|
Preference number: 6 (lower is better) Translates to: PTDKTVKENTMG*PLGQWEIALTT Trigger: GGTGGTCAGAGCTATTTCCCACTGGCCCAGTGGTCATCCCATGGTGTTCTCTTTGACGGTCTTGTCCGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655692.1 |
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| CDS GCA 72 bp | AAAAATCAAGATGTCTGCAGATTTCGAGAGATGGGGTaGGGTGGCGTGCGATGGCGAAGGACGGCGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: KNQDVCRFREMG*GGVRWRRTARD Trigger: GTCCCTCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTGATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 42 transcripts: ENST00000413755.5 ENST00000417578.6 ENST00000424235.1 ENST00000436764.6 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS GCA 72 bp | AAGGCTGAGACCTTGCGGACCCATGGTCCAGCGCCCTaGTACTATGAAGACAACACATCCCATGGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KAETLRTHGPAP*YYEDNTSHGAS Trigger: AGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTCTCAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000655311.1 ENST00000658076.1 ENST00000658324.1 ENST00000658905.1 ENST00000660558.1 ENST00000662982.1 ENST00000663534.1 ENST00000663955.1 ENST00000665693.1 |
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| CDS CCA 72 bp | GTGGGAAAAATCAAGATGTCTGCAGATTTCGAGAGATaGGGTGCGGTGGCGTGCGATGGCGAAGGACGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: VGKIKMSADFER*GAVACDGEGRR Trigger: TCGCCGTCCTTCGCCATCGCACGCCACCGCACCCCATCTCTCGAAATCTGCAGACATCTTGATTTTTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 43 transcripts: ENST00000413755.5 ENST00000417578.6 ENST00000424235.1 ENST00000436764.6 ENST00000456953.6 ENST00000651115.2 ENST00000653697.1 ENST00000654008.1 ENST00000654183.1 ENST00000655520.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658488.1 ENST00000658905.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662982.1 ENST00000663540.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000665181.1 ENST00000665233.1 ENST00000665735.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000669033.1 ENST00000669137.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CCA 72 bp | GATTCAAAACAGGTCAGATGGCCCTTGGCTGGCATCTaGGAACTTGGCTCTCGGGATGTTCCACTCCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSKQVRWPLAGI*ELGSRDVPLPA Trigger: GGCAGGGAGTGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653753.1 |
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| CDS CCA 72 bp | CTGAAGGGGACTCTGAACCTAGGACAGGTTCTGGTGTaGCACACCAGCGTGGCGCAGTCTAGCATACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LKGTLNLGQVLV*HTSVAQSSIHS Trigger: ACTGTGTATGCTAGACTGCGCCACGCTGGTGTGCCACACCAGAACCTGTCCTAGGTTCAGAGTCCCCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CCA 72 bp | CCCAGATCTCCAGAGGACAGACCTCATAGAACACCATaGTCCACCTGCTTCCTGGCAGGGTGGAGATACCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSPEDRPHRTP*STCFLAGWRYL Trigger: GAGGTATCTCCACCCTGCCAGGAAGCAGGTGGACCATGGTGTTCTATGAGGTCTGTCCTCTGGAGATCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CCA 72 bp | ACAGGTCAGATGGCCCTTGGCTGGCATCTGGGAACTTaGCTCTCGGGATGTTCCTGGAACAGAACAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGQMALGWHLGT*LSGCSWNRTAD Trigger: GTCAGCTGTTCTGTTCCAGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663784.1 |
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| CDS TCA 72 bp | CCCTCTAGTGACCTCAAAGCCTTCGTCCTTGCGGCCTaGACACCAGTGCATTCTCTAGAGAAGCACCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSSDLKAFVLAA*TPVHSLEKHPG Trigger: TCCTGGGTGCTTCTCTAGAGAATGCACTGGTGTTCAGGCCGCAAGGACGAAGGCTTTGAGGTCACTAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS GCA 72 bp | TGGTTATTAAAGTCATTCCAGGCATGGACAGAGGGATaGGAGGCTGGCCTTCCCTGTCCACGGTCCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: WLLKSFQAWTEG*EAGLPCPRSSE Trigger: CTCAGAGGACCGTGGACAGGGAAGGCCAGCCTCGCATCCCTCTGTCCATGCCTGGAATGACTTTAATAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 87 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000423536.6 ENST00000436764.6 ENST00000449469.5 ENST00000456953.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653697.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654183.1 ENST00000654389.1 ENST00000654853.1 ENST00000655198.1 ENST00000655311.1 ENST00000655520.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657429.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658141.1 ENST00000658324.1 ENST00000658455.1 ENST00000658488.1 ENST00000658905.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000662572.1 ENST00000662982.1 ENST00000663187.1 ENST00000663534.1 ENST00000663540.1 ENST00000663784.1 ENST00000663955.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665693.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666549.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
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| CDS GCA 72 bp | GGCTGCTGCCGTAAATCCCTCAGTGATCTTCTCCCCTaGCTGTCTCTGGTCCTTGATTCCTTTCCCACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCCRKSLSDLLP*LSLVLDSFPTS Trigger: GCTTGTGGGAAAGGAATCAAGGACCAGAGACAGGCAGGGGAGAAGATCACTGAGGGATTTACGGCAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659400.1 ENST00000660189.1 |
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| CDS CCA 72 bp | GATTCAAAACAGGTCAGATGGCCCTTGGCTGGCATCTaGGAACTTGGCTCTCGGGATGTTCCTGGGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DSKQVRWPLAGI*ELGSRDVPGTS Trigger: TGAGGTCCCAGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000414142.5 ENST00000651115.2 ENST00000653697.1 ENST00000656320.1 ENST00000657216.1 ENST00000657843.1 ENST00000658905.1 ENST00000660558.1 ENST00000661252.1 ENST00000664636.1 ENST00000666331.1 ENST00000669033.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 |
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| CDS CCA 72 bp | CCACGGTCCTCTGAGGCAGCTGAAGTCTCCCATGTCTaGACCCCGAATCTTGTGCAGATTGAACAGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PRSSEAAEVSHV*TPNLVQIEQWI Trigger: GATCCACTGTTCAATCTGCACAAGATTCGGGGTCCAGACATGGGAGACTTCAGCTGCCTCAGAGGACCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 87 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000423536.6 ENST00000436764.6 ENST00000449469.5 ENST00000456953.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653697.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654183.1 ENST00000654389.1 ENST00000654853.1 ENST00000655198.1 ENST00000655311.1 ENST00000655520.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657429.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658141.1 ENST00000658324.1 ENST00000658455.1 ENST00000658488.1 ENST00000658905.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000662572.1 ENST00000662982.1 ENST00000663187.1 ENST00000663534.1 ENST00000663540.1 ENST00000663784.1 ENST00000663955.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665693.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666549.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
||
| CDS CCA 72 bp | CATGTTCAACAGGAAAAAGCGACCTCTCAATCGGGGTaGGATGGGCTAGACGGCGGCTGCATCAGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: HVQQEKATSQSG*DGLDGGCISDF Trigger: GAAGTCACTGATGCAGCCGCCGTCTAGCCCATCCCACCCCGATTGAGAGGTCGCTTTTTCCTGTTGAACATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
||
| CDS CCA 72 bp | GTTCCCATCTGCATAAACACGGACCAGCTGAGCCTCTaGCTGTGGGTTCTGGCTCTTGGCATCAACTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VPICINTDQLSL*LWVLALGINSP Trigger: TGGTGAGTTGATGCCAAGAGCCAGAACCCACAGCCAGAGGCTCAGCTGGTCCGTGTTTATGCAGATGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658324.1 ENST00000668482.1 |
||
| CDS CAA 90 bp | CTGGGCCAGTGGGAAATAGCTCTGACCACCCCCACACAGGCTGCCTaGCTCAAAACTACTTCCCTGACATGCATCAATGTGCTAAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LGQWEIALTTPTQAA*LKTTSLTCINVLSP Trigger: AGGGCTTAGCACATTGATGCATGTCAGGGAAGTAGTTTTGAGCAAGGCAGCCTGTGTGGGGGTGGTCAGAGCTATTTCCCACTGGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655692.1 |
||
| CDS TCA 72 bp | ACATCCCATGGAGCCTCTGCACACAGCAGACCCATCTaGAACAGACACAGAGAACACTTAACGCAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSHGASAHSRPI*NRHREHLTQGL Trigger: CAGCCCCTGCGTTAAGTGTTCTCTGTGTCTGTTTCAGATGGGTCTGCTGTGTGCAGAGGCTCCATGGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655311.1 ENST00000658324.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 72 bp | GACAGAACGTGGAACCACGGGATACCACTTTCACCTTaGTTCCCCTACATCATCCAAGCCCCAGGAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: DRTWNHGIPLSP*FPYIIQAPGTA Trigger: TGCTGTTCCTGGGGCTTGGATGATGTAGGGGAAGCAAGGTGAAAGTGGTATCCCGTGGTTCCACGTTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 65 transcripts: ENST00000414142.5 ENST00000436764.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654389.1 ENST00000654853.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000658455.1 ENST00000658488.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660885.1 ENST00000661252.1 ENST00000662568.1 ENST00000663187.1 ENST00000663540.1 ENST00000663784.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
||
| CDS GCA 72 bp | GTGACGCTTCATGTGGTAGCCTCACTCTCCATTCTCTaGCCCTCTCGTGCCCACAAACACCACCAAGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: VTLHVVASLSIL*PSRAHKHHQEI Trigger: AATCTCTTGGTGGTGTTTGTGGGCACGAGAGGGGCAGAGAATGGAGAGTGAGGCTACCACATGAAGCGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 87 transcripts: ENST00000414142.5 ENST00000417578.6 ENST00000423536.6 ENST00000436764.6 ENST00000449469.5 ENST00000456953.6 ENST00000651115.2 ENST00000653277.1 ENST00000653343.1 ENST00000653697.1 ENST00000653753.1 ENST00000653938.1 ENST00000654008.1 ENST00000654092.1 ENST00000654183.1 ENST00000654389.1 ENST00000654853.1 ENST00000655198.1 ENST00000655311.1 ENST00000655520.1 ENST00000655692.1 ENST00000656023.1 ENST00000656320.1 ENST00000657216.1 ENST00000657429.1 ENST00000657665.1 ENST00000657843.1 ENST00000657868.1 ENST00000658051.1 ENST00000658076.1 ENST00000658141.1 ENST00000658324.1 ENST00000658455.1 ENST00000658488.1 ENST00000658905.1 ENST00000659102.1 ENST00000659186.1 ENST00000659255.1 ENST00000659400.1 ENST00000659753.1 ENST00000660064.1 ENST00000660189.1 ENST00000660558.1 ENST00000660885.1 ENST00000661252.1 ENST00000662213.1 ENST00000662568.1 ENST00000662572.1 ENST00000662982.1 ENST00000663187.1 ENST00000663534.1 ENST00000663540.1 ENST00000663784.1 ENST00000663955.1 ENST00000664073.1 ENST00000664626.1 ENST00000664636.1 ENST00000664964.1 ENST00000665003.1 ENST00000665181.1 ENST00000665233.1 ENST00000665440.1 ENST00000665693.1 ENST00000665735.1 ENST00000666225.1 ENST00000666268.1 ENST00000666331.1 ENST00000666419.1 ENST00000666549.1 ENST00000666806.1 ENST00000667188.1 ENST00000667282.1 ENST00000667412.1 ENST00000667835.1 ENST00000667912.1 ENST00000668042.1 ENST00000668054.1 ENST00000668482.1 ENST00000669033.1 ENST00000669114.1 ENST00000669137.1 ENST00000669405.1 ENST00000669480.1 ENST00000670051.1 ENST00000670958.1 ENST00000671249.1 ENST00000671309.1 |
||
| CDS GCA 72 bp | CATCTGGGAACTTGGCTCTCGGGATGTTCCACTCCCTaGCAGAAGCAGAAAGGAAGGCAAACATGGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HLGTWLSGCSTP*QKQKGRQTWAE Trigger: TTCTGCCCATGTTTGCCTTCCTTTCTGCTTCTGGCAGGGAGTGGAACATCCCGAGAGCCAAGTTCCCAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653753.1 |
||
| CDS GCA 72 bp | CCTCTCATGGGCCTCTCTGCACCAATCAGCCTCCTCTaGCAGAATCAAGAAGCCCTGGATGAGCTATCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLMGLSAPISLL*QNQEALDELSR Trigger: TCTAGATAGCTCATCCAGGGCTTCTTGATTCTGGCAGAGGAGGCTGATTGGTGCAGAGAGGCCCATGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
||
| CDS GCA 72 bp | CACACACACACACACACACACACACGGGGTCAGCCCTaGTCACCCCAACCTCAAAGTCTCCCTCATGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HTHTHTHTRGQP*SPQPQSLPHVY Trigger: ATAAACATGAGGGAGACTTTGAGGTTGGGGTGAGCAGGGCTGACCCCGTGTGTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS GCA 72 bp | AAAAATCCCACCTTGCGGACCCATGGTCCAGCGCCCTaGTACTATGAAGACAACACATCCCATGGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KNPTLRTHGPAP*YYEDNTSHGAS Trigger: AGAGGCTCCATGGGATGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 72 bp | AGGTGGGAGGGTCACTTAAGCCCAGGAGACAGAGGTTaGAGTGAGCAAACACAGTTCACTGCAACCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RWEGHLSPGDRG*SEQTQFTATSV Trigger: GACAGAGGTTGCAGTGAACTGTGTTTGCTCACTGCAACCTCTGTCTCCTGGGCTTAAGTGACCCTCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659102.1 |
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| CDS CCA 72 bp | CACACCTCAGAGGGTCGAGAGAACAGGCGAAACTCTTaGGTGGGAAGTGAGGGAAGTGTTTTGCCTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HTSEGRENRRNS*VGSEGSVLPLR Trigger: TCTGAGAGGCAAAACACTTCCCTCACTTCCCACCCAAGAGTTTCGCCTGTTCTCTCGACCCTCTGAGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CCA 72 bp | GATTCAAAACAGGTCAGATGGCCCTTGGCTGGCATCTaGGAACTTGGCTCTCGGGATGTTCCTGAACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: DSKQVRWPLAGI*ELGSRDVPEQP Trigger: TGGCTGTTCAGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660189.1 |
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| CDS CCA 72 bp | CCGTTCACTGGACACAGTCTCTCCGTGCAAATAATGTaGCACAGGCACCTGTTTTCCTGGGACCTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PFTGHSLSVQIM*HRHLFSWDLRI Trigger: GATCCTGAGGTCCCAGGAAAACAGGTGCCTGTGCCACATTATTTGCACGGAGAGACTGTGTCCAGTGAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667912.1 |
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| CDS TCA 72 bp | GATTCGCAGTTCTCACGTGTGCCCTTCACTGCTATCTaGATTCATTCCAGCGTGGGGCCCAGAGAGAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: DSQFSRVPFTAI*IHSSVGPREKC Trigger: GCATTTCTCTCTGGGCCCCACGCTGGAATGAATTCAGATAGCAGTGAAGGGCACACGTGAGAACTGCGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS TCA 72 bp | AATGTACTGACAGCTTGTCTAGCCCATCCTGGTCACTaGCACAGTCCCCTGAGGTCATCCCGTCTGAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: NVLTACLAHPGH*HSPLRSSRLKW Trigger: CCATTTCAGACGGGATGACCTCAGGGGACTGTGTCAGTGACCAGGATGGGCTAGACAAGCTGTCAGTACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654853.1 ENST00000655692.1 ENST00000663534.1 |
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| CDS TCA 72 bp | GACACTCCTGCAGGGCACAAGAAGCCAAGATGTGACTaGTGCACTTGGCACTGCTTATGGCAAGTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DTPAGHKKPRCD*CTWHCLWQVQE Trigger: TTCCTGGACTTGCCATAAGCAGTGCCAAGTGCATCAGTCACATCTTGGCTTCTTGTGCCCTGCAGGAGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654853.1 ENST00000655692.1 ENST00000663534.1 |
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| CDS TCA 72 bp | AAAGGCAGAGGAATTAAGAGCTGGAATGGTGGCCAGTaGGTGACACCAATGCACACCTCAGAGGGTCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KGRGIKSWNGGQ*VTPMHTSEGRE Trigger: CTCTCGACCCTCTGAGGTGTGCATTGGTGTCACTCACTGGCCACCATTCCAGCTCTTAATTCCTCTGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS TCA 72 bp | TCCCACTTCAACAAACTATGCCAATCCACACTAGGATaGCTCAGAGCCCAAGGGGAGCTCTGTAAGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SHFNKLCQSTLG*LRAQGELCKPH Trigger: GTGGGGCTTACAGAGCTCCCCTTGGGCTCTGAGTCATCCTAGTGTGGATTGGCATAGTTTGTTGAAGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS GCA 72 bp | ACAAGTCAGGCAACAATTTCCACAGGTTCAGCTTGGTaGAGGGGCTGGATAAGGACGTGGAAGGAGAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSQATISTGSAW*RGWIRTWKERC Trigger: ACACCTCTCCTTCCACGTCCTTATCCAGCCCCTGCACCAAGCTGAACCTGTGGAAATTGTTGCCTGACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659400.1 ENST00000660189.1 |
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| CDS GCA 72 bp | GCTGCTTCTGACTCCCAGAGATCACTTACCACTCCCTaGCAGAAGCAGAAAGGAAGGCAAACATGGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AASDSQRSLTTP*QKQKGRQTWAE Trigger: TTCTGCCCATGTTTGCCTTCCTTTCTGCTTCTGGCAGGGAGTGGTAAGTGATCTCTGGGAGTCAGAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659400.1 |
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| CDS CCA 72 bp | GAAAAACTCACTGCTAATCCAGATCACAGCACACTATaGACACACCAGCGCTCAAGGGAGGAGGACGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EKLTANPDHSTL*THQRSREEDGS Trigger: GGAACCGTCCTCCTCCCTTGAGCGCTGGTGTGTCCATAGTGTGCTGTGATCTGGATTAGCAGTGAGTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS CCA 72 bp | CACCAATCAGCCTCCTCTGCCAGAATCAAGAAGCCCTaGATGAGCTATCTAGACATCACCTGGTCAAACCCG | + |
|
Preference number: 6 (lower is better) Translates to: HQSASSARIKKP*MSYLDITWSNP Trigger: CGGGTTTGACCAGGTGATGTCTAGATAGCTCATCCAGGGCTTCTTGATTCTGGCAGAGGAGGCTGATTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CAA 90 bp | TCACTTTGCACACAGGGGCAGAAAGAGATCCAGGGCTTGTTGAAATaGGAGACCAACGTCAGAAGCCTGAAAAATGGCCTGAGCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLCTQGQKEIQGLLK*ETNVRSLKNGLSQD Trigger: GTCCTGGCTCAGGCCATTTTTCAGGCTTCTGACGTTGGTCTCCAATTTCAACAAGCCCTGGATCTCTTTCTGCCCCTGTGTGCAAAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS TCA 72 bp | CCCCAACCAGGAGAAGTAAAGGAAAGACCCTCCAGATaGGAAAGCTGGCAGACTTCTTCGGACGTGGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQPGEVKERPSR*ESWQTSSDVED Trigger: ATCTTCCACGTCCGAAGAAGTCTGCCAGCTTTCTCATCTGGAGGGTCTTTCCTTTACTTCTCCTGGTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS GCA 72 bp | CATGAAGCAAAGCCCGTGATTCGCAGTTCTCACGTGTaGCCTTCACTGCTATCTGAATTCATTCCAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HEAKPVIRSSHV*PSLLSEFIPAW Trigger: CCACGCTGGAATGAATTCAGATAGCAGTGAAGGGCACACGTGAGAACTGCGAATCACGGGCTTTGCTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS GCA 72 bp | AGTGAGGGAAGTGTTTTGCCTCTCAGAACCCGGCTGTaGTCCCCTTGCAGCAATGAGCACTTTCTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SEGSVLPLRTRL*SPCSNEHFLFL Trigger: AAGAAAGAGAAAGTGCTCATTGCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACTTCCCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS CCA 72 bp | GGCACAGGCACCTGTTTTCCTGAAAGTCTGGAATTTTaGTGCGTGCTAGGCAGGTGGTGTCTACATAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTGTCFPESLEF*CVLGRWCLHNQ Trigger: CTGGTTATGTAGACACCACCTGCCTAGCACGCACCAAAATTCCAGACTTTCAGGAAAACAGGTGCCTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659255.1 ENST00000660064.1 ENST00000669114.1 |
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| CDS CCA 72 bp | ATATCCTCTGAGCCAAGGAAGAGTGAAAATCAGATCTaGCCTATGGCCTACCTTCTCCAAAGCCAGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSEPRKSENQI*PMAYLLQSQPG Trigger: GCCAGGCTGGCTTTGGAGAAGGTAGGCCATAGGCCAGATCTGATTTTCACTCTTCCTTGGCTCAGAGGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS CAA 72 bp | TGGGAAATAGCTCTGACCACCCCCACACAGGCTGCCTaGCTCAAAACTACTTCCCTGACATGCATCAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: WEIALTTPTQAA*LKTTSLTCINV Trigger: CACATTGATGCATGTCAGGGAAGTAGTTTTGAGCAAGGCAGCCTGTGTGGGGGTGGTCAGAGCTATTTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655692.1 |
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| CDS CAA 90 bp | GAGATTCAAAACAGGTCAGATGGCCCTTGGCTGGCATCTGGGAACTaGGCTCTCGGGATGTTCCTAGTCAACAGTTTACTGATCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: EIQNRSDGPWLASGN*ALGMFLVNSLLIRT Trigger: GGTTCTGATCAGTAAACTGTTGACTAGGAACATCCCGAGAGCCAAGTTCCCAGATGCCAGCCAAGGGCCATCTGACCTGTTTTGAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000449469.5 ENST00000653343.1 ENST00000654389.1 ENST00000658455.1 ENST00000659255.1 ENST00000660064.1 ENST00000666225.1 ENST00000667912.1 ENST00000669114.1 |
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| CDS TCA 72 bp | CCCTGCACTGTTAATGATCGGGACACAGGCAACCCATaGTCACTTTTGGATACAAGAGCAGGGAAGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PCTVNDRDTGNP*SLLDTRAGKDR Trigger: TCTGTCCTTCCCTGCTCTTGTATCCAAAAGTGATCATGGGTTGCCTGTGTCCCGATCATTAACAGTGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS TCA 72 bp | CATTCCGGGCAATGGTCTCACCTGGAACAGAACAGCTaGCAGGGCAATGAGCAGACTTACAGCCTAAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: HSGQWSHLEQNS*QGNEQTYSLRL Trigger: TAATCTTAGGCTGTAAGTCTGCTCATTGCCCTGTCAGCTGTTCTGTTCCAGGTGAGACCATTGCCCGGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659400.1 |
||
| CDS GCA 72 bp | AGTGTTTTGCCTCTCAGAACCCGGCTGTGCTCCCCTTaGAGCAATGAGCACTTTCTCTTTCTTACGACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SVLPLRTRLCSP*SNEHFLFLTTN Trigger: GTTTGTCGTAAGAAAGAGAAAGTGCTCATTGCTGCAAGGGGAGCACAGCCGGGTTCTGAGAGGCAAAACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000669405.1 ENST00000671309.1 |
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| CDS GCA 72 bp | AAACATATTCCAGACAACAGTCCAAAAATCCCACCTTaGGGACCCATGGTCCAGCGCCCTGCTACTATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KHIPDNSPKIPP*GPMVQRPATMK Trigger: CTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTTGGACTGTTGTCTGGAATATGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS CCA 72 bp | ATGAGCTATCTAGACATCACCTGGTCAAACCCGTTCTaGAAAGGACAAGGAGAGTACTGGCACAGAAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MSYLDITWSNPF*KGQGEYWHRSH Trigger: GTGGCTTCTGTGCCAGTACTCTCCTTGTCCTTTCCAGAACGGGTTTGACCAGGTGATGTCTAGATAGCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CAA 72 bp | GAAACATATTCCAGACAACAGTCCAAAAATCCCACCTaGCGGACCCATGGTCCAGCGCCCTGCTACTATGAA | + |
|
Preference number: 6 (lower is better) Translates to: ETYSRQQSKNPT*RTHGPAPCYYE Trigger: TTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTTGGACTGTTGTCTGGAATATGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS CAA 72 bp | CTCTTCTATCAGCCATGCCTAGCTATACCTCTGGCTTaGGTCGCTGACATCACAATGACAATCCTGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFYQPCLAIPLA*VADITMTILWG Trigger: TCCCCACAGGATTGTCATTGTGATGTCAGCGACCAAAGCCAGAGGTATAGCTAGGCATGGCTGATAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655692.1 |
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| CDS CAA 90 bp | GGATGCAAAGAAACATATTCCAGACAACAGTCCAAAAATCCCACCTaGCGGACCCATGGTCCAGCGCCCTGCTACTATGAAGACAACACA | + |
|
Preference number: 6 (lower is better) Translates to: GCKETYSRQQSKNPT*RTHGPAPCYYEDNT Trigger: TGTGTTGTCTTCATAGTAGCAGGGCGCTGGACCATGGGTCCGCAAGGTGGGATTTTTGGACTGTTGTCTGGAATATGTTTCTTTGCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS TCA 72 bp | CTCCAAAGCCAGCCTGGCAGGCTCACAGGTTGTCACTaGTTTAAGAAGCACATGGAGCAATTCTGTAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: LQSQPGRLTGCH*FKKHMEQFCKV Trigger: AACCTTACAGAATTGCTCCATGTGCTTCTTAAATCAGTGACAACCTGTGAGCCTGCCAGGCTGGCTTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654008.1 ENST00000658076.1 ENST00000662982.1 |
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| CDS TCA 72 bp | AGAAGCAGAAAGGAAGGCAAACATGGGCAGAAATATTaGGAATCCTGGGGCTCTTCTCAAAGACTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSRKEGKHGQKY*ESWGSSQRLGW Trigger: CCAGCCCAGTCTTTGAGAAGAGCCCCAGGATTCTCAATATTTCTGCCCATGTTTGCCTTCCTTTCTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658141.1 ENST00000659400.1 ENST00000662568.1 ENST00000665440.1 |
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| CDS TCA 72 bp | AACTTGGCTCTCGGGATGTTCCTGGAACAGAACAGCTaGCAGGGCAATGAGCAGACTTACAGCCTAAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: NLALGMFLEQNS*QGNEQTYSLRL Trigger: TAATCTTAGGCTGTAAGTCTGCTCATTGCCCTGTCAGCTGTTCTGTTCCAGGAACATCCCGAGAGCCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663784.1 |
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| CDS GCA 72 bp | CATCTGTCAGGCCAACTGTTACTAAGTTCAAGAGGATaGTGGGGCCATGATGATCTTGGGATGTGCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HLSGQLLLSSRG*WGHDDLGMCCF Trigger: GAAACAGCACATCCCAAGATCATCATGGCCCCAGCATCCTCTTGAACTTAGTAACAGTTGGCCTGACAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659400.1 ENST00000660189.1 |
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| CDS GCA 72 bp | ACAGGCACCTGTTTTCCTGAAAGTCTGGAATTTTGGTaGGTGCTAGGCAGGTGGTGTCTACATAACCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: TGTCFPESLEFW*VLGRWCLHNQI Trigger: GATCTGGTTATGTAGACACCACCTGCCTAGCACGCACCAAAATTCCAGACTTTCAGGAAAACAGGTGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000659255.1 ENST00000660064.1 ENST00000669114.1 |
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| CDS CCA 72 bp | ATCAAGAAGCCCTGGATGAGCTATCTAGACATCACCTaGTCAAACCCGTTCTGGAAAGGACAAGGAGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: IKKPWMSYLDIT*SNPFWKGQGEY Trigger: GTACTCTCCTTGTCCTTTCCAGAACGGGTTTGACCAGGTGATGTCTAGATAGCTCATCCAGGGCTTCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CAA 72 bp | TCACTTTGCACACAGGGGCAGAAAGAGATCCAGGGCTaGTTGAAATTGGAGACCAACGTCAGAAGCCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLCTQGQKEIQG*LKLETNVRSLK Trigger: TTTCAGGCTTCTGACGTTGGTCTCCAATTTCAACAAGCCCTGGATCTCTTTCTGCCCCTGTGTGCAAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CAA 72 bp | TGTAATCCCAGCACTTTGGGAGGCTGTCCCAATTATTaGTATCACATAAGGCCAGGACTTCGAGACCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CNPSTLGGCPNY*YHIRPGLRDQP Trigger: AGGCTGGTCTCGAAGTCCTGGCCTTATGTGATACAAATAATTGGGACAGCCTCCCAAAGTGCTGGGATTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657665.1 ENST00000662572.1 ENST00000663955.1 |
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| CDS CAA 90 bp | CCACAGGAATACAGCTTTCCTAGCCCCACCTGCAACTTTCTCCATTaGTTCGACATTACTGATGGTGCCTGTGGAAACAATGTGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQEYSFPSPTCNFLH*FDITDGACGNNVDF Trigger: GAAATCCACATTGTTTCCACAGGCACCATCAGTAATGTCGAACAAATGGAGAAAGTTGCAGGTGGGGCTAGGAAAGCTGTATTCCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS TCA 72 bp | ACACACCATGACTCATTACATATCACATTCCCTTCCTaGTCTACCCCTCAGAACACAGAGCCTGGTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: THHDSLHITFPS*STPQNTEPGFC Trigger: GCAGAAACCAGGCTCTGTGTTCTGAGGGGTAGATCAGGAAGGGAATGTGATATGTAATGAGTCATGGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS TCA 72 bp | AAGCTGACACCATGGATTTTTACATCCCACACATGCTaGCCAACTTGTCCCAGTTTGCTCAAGATCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KLTPWIFTSHTC*PTCPSLLKISL Trigger: CAGGGAGATCTTGAGCAAACTGGGACAAGTTGGTCAGCATGTGTGGGATGTAAAAATCCATGGTGTCAGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS TCA 72 bp | TCAGCCATGCCTAGCTATACCTCTGGCTTTGGTCGCTaGCATCACAATGACAATCCTGTGGGGAAATTAATC | + |
|
Preference number: 6 (lower is better) Translates to: SAMPSYTSGFGR*HHNDNPVGKLI Trigger: GATTAATTTCCCCACAGGATTGTCATTGTGATGTCAGCGACCAAAGCCAGAGGTATAGCTAGGCATGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655692.1 |
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| CDS CAA 72 bp | ACCATGGATTTTTACATCCCACACATGCTGACCAACTaGTCCCAGTTTGCTCAAGATCTCCCTGGGTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TMDFYIPHMLTN*SQFAQDLPGFS Trigger: GCTAAACCCAGGGAGATCTTGAGCAAACTGGGACAAGTTGGTCAGCATGTGTGGGATGTAAAAATCCATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS CAA 90 bp | TGCTCACCCCAACCTCAAAGTCTCCCTCATGTTTATATGCCAATATaGCACTTATTCGAAACTGTGCTATCCACTGCGACACACCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: CSPQPQSLPHVYMPI*HLFETVLSTATHHD Trigger: GTCATGGTGTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGACTTTGAGGTTGGGGTGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS CAA 90 bp | TCTGGCAGACATAACAAAGTAGGGAACAAAATTCAGACACTGCCCTaGAGACCACAGCAAAGAGAGCCAGGAAACAAGTCAGGCAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: SGRHNKVGNKIQTLP*RPQQREPGNKSGNN Trigger: ATTGTTGCCTGACTTGTTTCCTGGCTCTCTTTGCTGTGGTCTCAAGGGCAGTGTCTGAATTTTGTTCCCTACTTTGTTATGTCTGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659400.1 ENST00000660189.1 |
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| CDS TCA 72 bp | CTCTCACTAAGCATCTCTACAGTGTTGCATAGATGCTaGCTAAACCGTTCTTCTCACCTGAACAGCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSISTVLHRC*LNRSSHLNSHD Trigger: GTCATGGCTGTTCAGGTGAGAAGAACGGTTTAGTCAGCATCTATGCAACACTGTAGAGATGCTTAGTGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449469.5 ENST00000654389.1 |
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| CDS TCA 72 bp | AGCTGCTCCTCACACACACTAAAAACGGTGACTATGTaGGATAACAGACATGCTCATCGGCTTCACCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCSSHTLKTVTM*DNRHAHRLHHS Trigger: ACTATGGTGAAGCCGATGAGCATGTCTGTTATCTCACATAGTCACCGTTTTTAGTGTGTGTGAGGAGCAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000657665.1 ENST00000662572.1 ENST00000663955.1 |
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| CDS TCA 72 bp | CCCCACCTGCAACTTTCTCCATTTGTTCGACATTACTaGTGGTGCCTGTGGAAACAATGTGGATTTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: PHLQLSPFVRHY*WCLWKQCGFHI Trigger: AATGTGAAATCCACATTGTTTCCACAGGCACCATCAGTAATGTCGAACAAATGGAGAAAGTTGCAGGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS TCA 72 bp | ATTACAACTGGAAAGAAATCCAGCCACTTTCCATTATaGCATGCTGCTAATGCACTGCAGGAAAAGCCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ITTGKKSSHFPL*HAANALQEKPP Trigger: TGGGGGCTTTTCCTGCAGTGCATTAGCAGCATGTCATAATGGAAAGTGGCTGGATTTCTTTCCAGTTGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000449469.5 ENST00000654389.1 ENST00000660064.1 ENST00000669114.1 |
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| CDS TCA 72 bp | CTGCCGTTTTTCCTTTGTCCCACACTGTCAGAATACTaGCCATCTGGCAGACATAACAAAGTAGGGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPFFLCPTLSEY*PSGRHNKVGNK Trigger: TTTGTTCCCTACTTTGTTATGTCTGCCAGATGGTCAGTATTCTGACAGTGTGGGACAAAGGAAAAACGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000659400.1 ENST00000660189.1 |
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| CDS GCA 72 bp | AGTAATCCACAGGAATACAGCTTTCCTAGCCCCACCTaGAACTTTCTCCATTTGTTCGACATTACTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SNPQEYSFPSPT*NFLHLFDITDG Trigger: ACCATCAGTAATGTCGAACAAATGGAGAAAGTTGCAGGTGGGGCTAGGAAAGCTGTATTCCTGTGGATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS GCA 72 bp | ATCCAAGCCCCAGGAACAGCACATGACTCTGCAGGATaGAAAGAAACATATTCCAGACAACAGTCCAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: IQAPGTAHDSAG*KETYSRQQSKN Trigger: ATTTTTGGACTGTTGTCTGGAATATGTTTCTTTGCATCCTGCAGAGTCATGTGCTGTTCCTGGGGCTTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000658141.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 72 bp | CAGAGAAAACCACTAGCTAATTGCCTGCCTCCAAAATaGAGTACTCCTCCCACTTCAACAAACTATGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: QRKPLANCLPPK*STPPTSTNYAN Trigger: ATTGGCATAGTTTGTTGAAGTGGGAGGAGTACTGCATTTTGGAGGCAGGCAATTAGCTAGTGGTTTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665003.1 |
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| CDS CAA 72 bp | GGTACAGGTAGGTTTGATGCCAAAGCCCTCCAGCTTTaGAGTCAGATATTCCAAGACACAACAATGATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGRFDAKALQL*SQIFQDTTMIR Trigger: CCTTATCATTGTTGTGTCTTGGAATATCTGACTCAAAAGCTGGAGGGCTTTGGCATCAAACCTACCTGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654853.1 ENST00000655692.1 |
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| CDS CAA 72 bp | CATAACAAAGTAGGGAACAAAATTCAGACACTGCCCTaGAGACCACAGCAAAGAGAGCCAGGAAACAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HNKVGNKIQTLP*RPQQREPGNKS Trigger: TGACTTGTTTCCTGGCTCTCTTTGCTGTGGTCTCAAGGGCAGTGTCTGAATTTTGTTCCCTACTTTGTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659400.1 ENST00000660189.1 |
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| CDS TCA 72 bp | TCGTTTTTCTTTCAAGCAGTTCACAATCGGGGCAAATaGCCAGCTAGAGTAATCCACAGGAATACAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFFFQAVHNRGK*PARVIHRNTAF Trigger: GAAAGCTGTATTCCTGTGGATTACTCTAGCTGGTCATTTGCCCCGATTGTGAACTGCTTGAAAGAAAAACGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000414142.5 ENST00000656023.1 ENST00000657868.1 ENST00000658051.1 ENST00000658141.1 ENST00000664626.1 ENST00000666225.1 ENST00000666806.1 ENST00000667282.1 ENST00000668042.1 ENST00000668482.1 ENST00000669405.1 |
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| CDS TCA 72 bp | AAACGTAACTCTAGGAAGAGGTCGGCAAACTATCTGTaGGAAAAATGGCATCTATGCTATCCTATGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KRNSRKRSANYL*EKWHLCYPMCP Trigger: TGGGCACATAGGATAGCATAGATGCCATTTTTCTCACAGATAGTTTGCCGACCTCTTCCTAGAGTTACGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000655311.1 ENST00000658324.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS TCA 72 bp | CTTATTCGAAACTGTGCTATCCACTGCGACACACCATaGCTCATTACATATCACATTCCCTTCCTGATCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LIRNCAIHCDTP*LITYHIPFLIY Trigger: GTAGATCAGGAAGGGAATGTGATATGTAATGAGTCATGGTGTGTCGCAGTGGATAGCACAGTTTCGAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS GCA 72 bp | GCTCACCCCAACCTCAAAGTCTCCCTCATGTTTATATaGCAATATTGCACTTATTCGAAACTGTGCTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AHPNLKVSLMFI*QYCTYSKLCYP Trigger: TGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGACTTTGAGGTTGGGGTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS CAA 72 bp | CAATTATGCCCTACCTTTGTTTTCTGTATCAGGAAATaGAGATTCAAAACAGGTCAGATGGCCCTTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLCPTFVFCIRK*RFKTGQMALGW Trigger: CCAGCCAAGGGCCATCTGACCTGTTTTGAATCTCAATTTCCTGATACAGAAAACAAAGGTAGGGCATAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653343.1 ENST00000658455.1 |
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| CDS CAA 90 bp | AACCCACAAATGCCACTGTCTCTATTAGTACTTACAGCCACATTATaGTCTCAGGAACAAGAAAAACGTAACTCTAGGAAGAGGTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: NPQMPLSLLVLTATL*SQEQEKRNSRKRSA Trigger: TGCCGACCTCTTCCTAGAGTTACGTTTTTCTTGTTCCTGAGACAATAATGTGGCTGTAAGTACTAATAGAGACAGTGGCATTTGTGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000655311.1 ENST00000658324.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS TCA 72 bp | CACTCCATAATCTACCCTGACTATTCTGCAATGCCCTaGATTATCATGGGTCCTAAATGCCTAAATGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HSIIYPDYSAMP*IIMGPKCLNVN Trigger: GTTCACATTTAGGCATTTAGGACCCATGATAATTCAGGGCATTGCAGAATAGTCAGGGTAGATTATGGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658076.1 ENST00000662982.1 |
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| CDS GCA 72 bp | AACCTCAAAGTCTCCCTCATGTTTATATGCCAATATTaGACTTATTCGAAACTGTGCTATCCACTGCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: NLKVSLMFICQY*TYSKLCYPLRH Trigger: GTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGACTTTGAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS CAA 72 bp | CAACCTCAAAGTCTCCCTCATGTTTATATGCCAATATaGCACTTATTCGAAACTGTGCTATCCACTGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: QPQSLPHVYMPI*HLFETVLSTAT Trigger: TGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACATGAGGGAGACTTTGAGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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| CDS CAA 72 bp | ATGCCACTGTCTCTATTAGTACTTACAGCCACATTATaGTCTCAGGAACAAGAAAAACGTAACTCTAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MPLSLLVLTATL*SQEQEKRNSRK Trigger: CTTCCTAGAGTTACGTTTTTCTTGTTCCTGAGACAATAATGTGGCTGTAAGTACTAATAGAGACAGTGGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000655311.1 ENST00000658324.1 ENST00000659102.1 ENST00000664964.1 ENST00000667188.1 ENST00000667282.1 |
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| CDS GCA 72 bp | ATGTTTATATGCCAATATTGCACTTATTCGAAACTGTaGTATCCACTGCGACACACCATGACTCATTACATA | + |
|
Preference number: 6 (lower is better) Translates to: MFICQYCTYSKL*YPLRHTMTHYI Trigger: TATGTAATGAGTCATGGTGTGTCGCAGTGGATAGCACAGTTTCGAATAAGTGCAATATTGGCATATAAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000657429.1 ENST00000658455.1 ENST00000659186.1 ENST00000659753.1 ENST00000665693.1 ENST00000671309.1 |
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