Pregenerated sensors for SNHG15 (Homo sapiens)
Ensembl gene IDs: ENSG00000232956Ensembl transcript IDs: ENST00000438705.3, ENST00000577700.5, ENST00000578968.5, ENST00000579383.5, ENST00000580458.5, ENST00000580528.2, ENST00000582727.2, ENST00000584327.5, ENST00000584686.1, ENST00000585030.5, ENST00000653305.1, ENST00000667119.1, ENST00000667823.1, ENST00000668580.1
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCGCGCCGCTGCGACTACGAAGTACGGAGTACGGAGTACAGGTCTaGCAGCCAAGACTGACGCCGCGCGCTGCGCCGCGCACCTCGACG | + |
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Preference number: 5 (lower is better) Translates to: TAPLRLRSTEYGVQV*QPRLTPRAAPRTST Trigger: CGTCGAGGTGCGCGGCGCAGCGCGCGGCGTCAGTCTTGGCTGGCAGACCTGTACTCCGTACTCCGTACTTCGTAGTCGCAGCGGCGCGGT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578968.5 ENST00000580528.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS TCA 90 bp | GACTACGAAGTACGGAGTACGGAGTACAGGTCTGCCAGCCAAGACTaGCGCCGCGCGCTGCGCCGCGCACCTCGACGTCACCGCGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: DYEVRSTEYRSASQD*RRALRRAPRRHRVV Trigger: GACTACGCGGTGACGTCGAGGTGCGCGGCGCAGCGCGCGGCGTCAGTCTTGGCTGGCAGACCTGTACTCCGTACTCCGTACTTCGTAGTC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000578968.5 ENST00000580528.2 ENST00000668580.1 |
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| CDS CCA 90 bp | CCCACCTGGGCTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATaGCGGTGGATGACTAGACTGCCGAAGACCGCGCCGCTGCGACTA | + |
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Preference number: 5 (lower is better) Translates to: PTWAQEWSGNTWGPG*RWMTRLPKTAPLRL Trigger: TAGTCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000578968.5 ENST00000579383.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 90 bp | TCAGCCACGGCTCCCACCTGGGCTCAGGAATGGTCAGGCAACACGTaGGGCCCAGGATGGCGGTGGATGACTAGACTGCCGAAGACCGCG | + |
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Preference number: 5 (lower is better) Translates to: SATAPTWAQEWSGNT*GPGWRWMTRLPKTA Trigger: CGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTGGGAGCCGTGGCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000578968.5 ENST00000579383.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 90 bp | TCCCCCAGGACCCCTACCTGGGCTCAGGAATGGTCAGGCAACACGTaGGGCCCAGGATGGCGGTGGATGACTAGACTGCCGAAGACCGCG | + |
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Preference number: 5 (lower is better) Translates to: SPRTPTWAQEWSGNT*GPGWRWMTRLPKTA Trigger: CGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTAGGGGTCCTGGGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 90 bp | CTGGCCTGGGCTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATaGCGGTGGATGACTAGACTGCCGAAGACCGCGCCGCTGCGACTA | + |
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Preference number: 5 (lower is better) Translates to: LAWAQEWSGNTWGPG*RWMTRLPKTAPLRL Trigger: TAGTCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000580458.5 |
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| CDS GCA 90 bp | GCCCACTCTACAGCCTCTCTTGCGGCAGGTCTACACGCCACCCCATaGCTTCCGGTGAGGTCCCTCCTGACCACACGTCCCATCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: AHSTASLAAGLHATP*LPVRSLLTTRPIPP Trigger: AGGTGGGATGGGACGTGTGGTCAGGAGGGACCTCACCGGAAGGCATGGGGTGGCGTGTAGACCTGCCGCAAGAGAGGCTGTAGAGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 90 bp | CCTACCTGGGCTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATaGCGGTGGATGACTAGACTGCCGAAGACCGCGCCGCTGCGACTA | + |
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Preference number: 5 (lower is better) Translates to: PTWAQEWSGNTWGPG*RWMTRLPKTAPLRL Trigger: TAGTCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS TCA 90 bp | CTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATGGCGGTGGATaGCTAGACTGCCGAAGACCGCGCCGCTGCGACTACGAAGTACGG | + |
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Preference number: 5 (lower is better) Translates to: LRNGQATRGAQDGGG*LDCRRPRRCDYEVR Trigger: CCGTACTTCGTAGTCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 90 bp | TGGGCTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATGGCGGTaGATGACTAGACTGCCGAAGACCGCGCCGCTGCGACTACGAAGT | + |
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Preference number: 5 (lower is better) Translates to: WAQEWSGNTWGPGWR*MTRLPKTAPLRLRS Trigger: ACTTCGTAGTCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 90 bp | CAGGAACTGGCAGCTAACACGGTCGCCTCCCAGTTTCATGGACACTaGGCTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATGGCGG | + |
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Preference number: 5 (lower is better) Translates to: QELAANTVASQFHGH*AQEWSGNTWGPGWR Trigger: CCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGTGTCCATGAAACTGGGAGGCGACCGTGTTAGCTGCCAGTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438705.3 |
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| CDS CCA 90 bp | CCTTCCGGTGAGGTCCCTCCTGACCACACGTCCCATCCCACCTACTaGGGTCCACCCAGGTCATGCAGAAGCCCCACTTCTCGGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: PSGEVPPDHTSHPTY*GPPRSCRSPTSRLK Trigger: TTTCAGCCGAGAAGTGGGGCTTCTGCATGACCTGGGTGGACCCCAGTAGGTGGGATGGGACGTGTGGTCAGGAGGGACCTCACCGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 90 bp | CAGCAACTATTCCTGGCCTGGGCTCAGGAATGGTCAGGCAACACGTaGGGCCCAGGATGGCGGTGGATGACTAGACTGCCGAAGACCGCG | + |
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Preference number: 5 (lower is better) Translates to: QQLFLAWAQEWSGNT*GPGWRWMTRLPKTA Trigger: CGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGCCAGGAATAGTTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580458.5 |
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| CDS GCA 90 bp | CCTGACCACACGTCCCATCCCACCTACTGGGGTCCACCCAGGTCATaGAGAAGCCCCACTTCTCGGCTGAAAGAGAAGCACGAGGTTACT | + |
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Preference number: 5 (lower is better) Translates to: PDHTSHPTYWGPPRS*RSPTSRLKEKHEVT Trigger: AGTAACCTCGTGCTTCTCTTTCAGCCGAGAAGTGGGGCTTCTGCATGACCTGGGTGGACCCCAGTAGGTGGGATGGGACGTGTGGTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 90 bp | CTTGTGCCTCTGAACCATTATCCAGCTCTAGCTCCTTGCAACGCCTaGCCCACTCTACAGCCTCTCTTGCGGCAGGTCTACACGCCACCC | + |
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Preference number: 5 (lower is better) Translates to: LVPLNHYPALAPCNA*PTLQPLLRQVYTPP Trigger: GGGTGGCGTGTAGACCTGCCGCAAGAGAGGCTGTAGAGTGGGCCAGGCGTTGCAAGGAGCTAGAGCTGGATAATGGTTCAGAGGCACAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS TCA 90 bp | CCCTCCCAAGCCCCAGTTCCCATAGGGGAGTCAGAGGCACCTGCATaGGCCATTGGACTACTACAAGAAAGGAGCGCAGGACTCTACCCT | + |
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Preference number: 5 (lower is better) Translates to: PSQAPVPIGESEAPA*AIGLLQERSAGLYP Trigger: AGGGTAGAGTCCTGCGCTCCTTTCTTGTAGTAGTCCAATGGCTCATGCAGGTGCCTCTGACTCCCCTATGGGAACTGGGGCTTGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000582727.2 ENST00000667119.1 ENST00000667823.1 |
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| CDS CCA 90 bp | GGTCCTGGTGCACAGCAAAGCTTCTCATTCTGGAAGCAGAGAACCTaGCACCCAAACCTAGGGCCAGAGGTCTGTCTGCCAGACCCACAG | + |
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Preference number: 5 (lower is better) Translates to: GPGAQQSFSFWKQRT*HPNLGPEVCLPDPQ Trigger: CTGTGGGTCTGGCAGACAGACCTCTGGCCCTAGGTTTGGGTGCCAGGTTCTCTGCTTCCAGAATGAGAAGCTTTGCTGTGCACCAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 90 bp | GGCTTGCTACCCTCATTCACCCAAATCCCCCACACTCAAGGAATCTaGCAGTCCACTCTCACTAAGCACCAGTCCCTGCTGGGGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GLLPSFTQIPHTQGI*QSTLTKHQSLLGAV Trigger: CACAGCCCCCAGCAGGGACTGGTGCTTAGTGAGAGTGGACTGCCAGATTCCTTGAGTGTGGGGGATTTGGGTGAATGAGGGTAGCAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 90 bp | CCCTGCTGGGGGCTGTGGGAAGAGACCAGAGTTCAATTAGGCACCTaGGCTTGGTTCCAGGAGCCCAGAGCTACTAATGACTCTCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PCWGLWEETRVQLGT*AWFQEPRATNDSQG Trigger: TCCCTGAGAGTCATTAGTAGCTCTGGGCTCCTGGAACCAAGCTCAGGTGCCTAATTGAACTCTGGTCTCTTCCCACAGCCCCCAGCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 90 bp | CACACTTACCCCTGCACAGGTTCCAAGGAACAGCCTGGCAGCCACTaGAGGTATCTTCTCTCAGGTCAGGTCCCCTCTAGCTCCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: HTYPCTGSKEQPGSH*RYLLSGQVPSSSSI Trigger: GATGCTGGAGCTAGAGGGGACCTGACCTGAGAGAAGATACCTTCAGTGGCTGCCAGGCTGTTCCTTGGAACCTGTGCAGGGGTAAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582727.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS GCA 90 bp | TTAAGAGAGGTGACCCCACCACCCAGAGGAACACAGGAGCTGTGCTaGTCGTGCTATGCTCAAGCCAGCAACACTCTTCTCATCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LREVTPPPRGTQELC*SCYAQASNTLLIPA Trigger: GGCTGGGATGAGAAGAGTGTTGCTGGCTTGAGCATAGCACGAGCAGCACAGCTCCTGTGTTCCTCTGGGTGGTGGGGTCACCTCTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 90 bp | ACCACCCTCCCAAGCCCCAGTTCCCATAGGGGAGTCAGAGGCACCTaGATGAGCCATTGGACTACTACAAGAAAGGAGCGCAGGACTCTA | + |
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Preference number: 5 (lower is better) Translates to: TTLPSPSSHRGVRGT*MSHWTTTRKERRTL Trigger: TAGAGTCCTGCGCTCCTTTCTTGTAGTAGTCCAATGGCTCATGCAGGTGCCTCTGACTCCCCTATGGGAACTGGGGCTTGGGAGGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000582727.2 ENST00000667119.1 ENST00000667823.1 |
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| CDS CCA 90 bp | CCACCGGCTTCTATATTCCACTCAGGATGCAGGGTTAGAGAGGCCTaGCATCAAACCCTGATCTGCTGGTTTGTGGCTGGGCAACCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PPASIFHSGCRVREA*HQTLICWFVAGQPW Trigger: CCAGGGTTGCCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCATCCTGAGTGGAATATAGAAGCCGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 90 bp | GGTCGCCTCCCAGTTTCATGGACACGGGGCATCTTGCAAAGGAGTTaGTGTGACAGTAAGCTCTTCCACTTTGAGACCGTCACCTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GRLPVSWTRGILQRS*CDSKLFHFETVTSA Trigger: GGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGTGTCCATGAAACTGGGAGGCGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579383.5 |
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| CDS GCA 90 bp | CCTTTAAGAGAGGTGACCCCACCACCCAGAGGAACACAGGAGCTGTaGTGCTCGTGCTATGCTCAAGCCAGCAACACTCTTCTCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: PLREVTPPPRGTQEL*CSCYAQASNTLLIP Trigger: TGGGATGAGAAGAGTGTTGCTGGCTTGAGCATAGCACGAGCAGCACAGCTCCTGTGTTCCTCTGGGTGGTGGGGTCACCTCTCTTAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 90 bp | AACTGGCAGCTAACACGGTCGCCTCCCAGTTTCATGGACAAAGACTaGTTGAACATGAGACTCAAGGAGGGACCTCAGCAGGCCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: NWQLTRSPPSFMDKD*LNMRLKEGPQQAWG Trigger: ACCCCAGGCCTGCTGAGGTCCCTCCTTGAGTCTCATGTTCAAGCAGTCTTTGTCCATGAAACTGGGAGGCGACCGTGTTAGCTGCCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000578968.5 ENST00000580458.5 ENST00000585030.5 ENST00000653305.1 ENST00000668580.1 |
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| CDS TCA 90 bp | GCTGCTGTAGAAACACTGACGGATGGCAGGCACTCTTGTGCCATGTaGAGACTGCTTGAACATGAGACTCAAGGAGGGACCTCAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AAVETLTDGRHSCAM*RLLEHETQGGTSAG Trigger: GCCTGCTGAGGTCCCTCCTTGAGTCTCATGTTCAAGCAGTCTTCACATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584327.5 ENST00000584686.1 |
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| CDS GCA 90 bp | TTCTCTCAGGTCAGGTCCCCTCTAGCTCCAGCATCTTGGGATTGCTaGTGTAGAAACACTGACGGATGGCAGGCACTCTTGTGCCATGTG | + |
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Preference number: 5 (lower is better) Translates to: FSQVRSPLAPASWDC*CRNTDGWQALLCHV Trigger: CACATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGACCTGAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 90 bp | GCAGCTAACACGGTCGCCTCCCAGTTTCATGGACACGGGGCATCTTaGAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACTTTGAGACCG | + |
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Preference number: 5 (lower is better) Translates to: AANTVASQFHGHGAS*KGVAVTVSSSTLRP Trigger: CGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGTGTCCATGAAACTGGGAGGCGACCGTGTTAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579383.5 |
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| CDS CCA 90 bp | TCAGGATGCAGGGTTAGAGAGGCCTGGCATCAAACCCTGATCTGCTaGTTTGTGGCTGGGCAACCCTGGACACATAATTCTGACCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SGCRVREAWHQTLIC*FVAGQPWTHNSDLG Trigger: CCCAAGGTCAGAATTATGTGTCCAGGGTTGCCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCATCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 90 bp | GAGTCTCCTCCGGGTAAAATGTTCCGAACGCGCTCAACCGCCTCTTaGGAGGAAGTAGCACGTGTAGTGAAGGCTTGGTCTCCAAGAATC | + |
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Preference number: 5 (lower is better) Translates to: ESPPGKMFRTRSTAS*EEVARVVKAWSPRI Trigger: GATTCTTGGAGACCAAGCCTTCACTACACGTGCTACTTCCTCTCAAGAGGCGGTTGAGCGCGTTCGGAACATTTTACCCGGAGGAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS GCA 90 bp | ATCTTCTCTCAGGTCAGGTCCCCTCTAGCTCCAGCATCTTGGGATTaGTGCTGTAGAAACACTGACGGATGGCAGGCACTCTTGTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: IFSQVRSPLAPASWD*CCRNTDGWQALLCH Trigger: ATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGACCTGAGAGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 90 bp | CCCTTGTTTTTCATTCAGGAGATACCAGAAGGGCCCAGGTCCTGGTaGACAGCAAAGCTTCTCATTCTGGAAGCAGAGAACCTGGCACCC | + |
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Preference number: 5 (lower is better) Translates to: PLFFIQEIPEGPRSW*TAKLLILEAENLAP Trigger: GGGTGCCAGGTTCTCTGCTTCCAGAATGAGAAGCTTTGCTGTGCACCAGGACCTGGGCCCTTCTGGTATCTCCTGAATGAAAAACAAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 90 bp | TGGGGTCTCTGCAACGTGATTTACCGGGGCATCTTGCAAAGGAGTTaGTGTGACAGTAAGCTCTTCCACTTTGAGACCGTCACCTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: WGLCNVIYRGILQRS*CDSKLFHFETVTSA Trigger: GGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGGTAAATCACGTTGCAGAGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 90 bp | CACTCAGGATGCAGGGTTAGAGAGGCCTGGCATCAAACCCTGATCTaGTGGTTTGTGGCTGGGCAACCCTGGACACATAATTCTGACCTT | + |
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Preference number: 5 (lower is better) Translates to: HSGCRVREAWHQTLI*WFVAGQPWTHNSDL Trigger: AAGGTCAGAATTATGTGTCCAGGGTTGCCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCATCCTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CCA 90 bp | GAAGGTATCTTCTCTCAGGTCAGGTCCCCTCTAGCTCCAGCATCTTaGGATTGCTGCTGTAGAAACACTGACGGATGGCAGGCACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: EGIFSQVRSPLAPAS*DCCCRNTDGWQALL Trigger: CAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGACCTGAGAGAAGATACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS TCA 90 bp | TATTCCACTCAGGATGCAGGGTTAGAGAGGCCTGGCATCAAACCCTaGTCTGCTGGTTTGTGGCTGGGCAACCCTGGACACATAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: YSTQDAGLERPGIKP*SAGLWLGNPGHIIL Trigger: CAGAATTATGTGTCCAGGGTTGCCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCATCCTGAGTGGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 90 bp | CATCCCAGCCAGTCCTTTAACACACCTAACACCAAGACAAGAACTTaGAGGCATCCATCTCCTTCCCATCCAAACTTCCCACCGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HPSQSFNTPNTKTRT*RHPSPSHPNFPPAS Trigger: AGAAGCCGGTGGGAAGTTTGGATGGGAAGGAGATGGATGCCTTCAAGTTCTTGTCTTGGTGTTAGGTGTGTTAAAGGACTGGCTGGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 90 bp | CTTTCACACCAGCATTGTCCAAAACAACTTCCACAGCGACAGAAATaGCCTCTAATCTGTGCGGTCCAATATGGTAGCCACTGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: LSHQHCPKQLPQRQK*PLICAVQYGSHWPP Trigger: AGGTGGCCAGTGGCTACCATATTGGACCGCACAGATTAGAGGGCATTTCTGTCGCTGTGGAAGTTGTTTTGGACAATGCTGGTGTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CCA 90 bp | TATCCCTTGTTTTTCATTCAGGAGATACCAGAAGGGCCCAGGTCCTaGTGCACAGCAAAGCTTCTCATTCTGGAAGCAGAGAACCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: YPLFFIQEIPEGPRS*CTAKLLILEAENLA Trigger: TGCCAGGTTCTCTGCTTCCAGAATGAGAAGCTTTGCTGTGCACCAGGACCTGGGCCCTTCTGGTATCTCCTGAATGAAAAACAAGGGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 90 bp | TTCCAGAAGGGCAACAAGCGAGGTTTCAAACTTGCTCAATTAAGGTaGCAAGGCTTGCATTCAAATTCAGCTCCACTCCTCACTAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FQKGNKRGFKLAQLR*QGLHSNSAPLLTRC Trigger: ACACCTAGTGAGGAGTGGAGCTGAATTTGAATGCAAGCCTTGGCACCTTAATTGAGCAAGTTTGAAACCTCGCTTGTTGCCCTTCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS TCA 90 bp | GAGCCCAGAGCTACTAATGACTCTCAGGGAAAGATCCTTTCTGGCTaGGGAAGAAGGGAAGGTGTCTTGGAAGAGATAACCTTATTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EPRATNDSQGKILSG*GRREGVLEEITLLN Trigger: ATTTAATAAGGTTATCTCTTCCAAGACACCTTCCCTTCTTCCTCAGCCAGAAAGGATCTTTCCCTGAGAGTCATTAGTAGCTCTGGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 90 bp | GAGACTTTGGTTCTCTTTGCTTTGCCTTGTAAATATCCTATTCCATaGGTCTCTCAGGGCAGGACTCTTCCCTGTTATTCCTCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ETLVLFALPCKYPIP*VSQGRTLPCYSSSL Trigger: CAGTGAAGAGGAATAACAGGGAAGAGTCCTGCCCTGAGAGACTCATGGAATAGGATATTTACAAGGCAAAGCAAAGAGAACCAAAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 90 bp | GGCGGCTCAGAAATCACTTCTGAAGGAGTAAGTAGACCAGGCACATaGAGTAGATTTCATTTTCCCCATGAAATAATGGTTCAGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GGSEITSEGVSRPGT*SRFHFPHEIMVQRK Trigger: TTTTCTCTGAACCATTATTTCATGGGGAAAATGAAATCTACTTCATGTGCCTGGTCTACTTACTCCTTCAGAAGTGATTTCTGAGCCGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000584686.1 ENST00000585030.5 |
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| CDS TCA 90 bp | TACGGCTCAGAAATCACTTCTGAAGGAGTAAGTAGACCAGGCACATaGAGTAGATTTCATTTTCCCCATGAAATAATGGTTCAGAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YGSEITSEGVSRPGT*SRFHFPHEIMVQRK Trigger: TTTTCTCTGAACCATTATTTCATGGGGAAAATGAAATCTACTTCATGTGCCTGGTCTACTTACTCCTTCAGAAGTGATTTCTGAGCCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 72 bp | GCCGTGCGTGGCCGGGGCCACAGCGTTTGGGGTAGATaGCGTCACGCGGCCGCGGGCGCTCGCTTGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVRGRGHSVWGR*RHAAAGARLVG Trigger: CCCTACCAAGCGAGCGCCCGCGGCCGCGTGACGTCATCTACCCCAAACGCTGTGGCCCCGGCCACGCACGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000578968.5 ENST00000580528.2 |
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| CDS TCA 72 bp | GTACGGAGTACGGAGTACAGGTCTGCCAGCCAAGACTaGCGCCGCGCGCTGCGCCGCGCACCTCGACGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VRSTEYRSASQD*RRALRRAPRRH Trigger: GTGACGTCGAGGTGCGCGGCGCAGCGCGCGGCGTCAGTCTTGGCTGGCAGACCTGTACTCCGTACTCCGTAC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000578968.5 ENST00000580528.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS TCA 72 bp | GGTCAGGCAACACGTGGGGCCCAGGATGGCGGTGGATaGCTAGACTGCCGAAGACCGCGCCGCTGCGACTAC | + |
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Preference number: 6 (lower is better) Translates to: GQATRGAQDGGG*LDCRRPRRCDY Trigger: GTAGTCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | CTGCGACTACGAAGTACGGAGTACGGAGTACAGGTCTaGCAGCCAAGACTGACGCCGCGCGCTGCGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: LRLRSTEYGVQV*QPRLTPRAAPR Trigger: GCGCGGCGCAGCGCGCGGCGTCAGTCTTGGCTGGCAGACCTGTACTCCGTACTCCGTACTTCGTAGTCGCAG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000578968.5 ENST00000580528.2 ENST00000582727.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS GCA 72 bp | ACAGCCTCTCTTGCGGCAGGTCTACACGCCACCCCATaGCTTCCGGTGAGGTCCCTCCTGACCACACGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TASLAAGLHATP*LPVRSLLTTRP Trigger: GGGACGTGTGGTCAGGAGGGACCTCACCGGAAGGCATGGGGTGGCGTGTAGACCTGCCGCAAGAGAGGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 72 bp | GAATGGTCAGGCAACACGTGGGGCCCAGGATGGCGGTaGATGACTAGACTGCCGAAGACCGCGCCGCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: EWSGNTWGPGWR*MTRLPKTAPLR Trigger: TCGCAGCGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 72 bp | GCTCAGGAATGGTCAGGCAACACGTGGGGCCCAGGATaGCGGTGGATGACTAGACTGCCGAAGACCGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AQEWSGNTWGPG*RWMTRLPKTAP Trigger: CGGCGCGGTCTTCGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 72 bp | GCTCCCACCTGGGCTCAGGAATGGTCAGGCAACACGTaGGGCCCAGGATGGCGGTGGATGACTAGACTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: APTWAQEWSGNT*GPGWRWMTRLP Trigger: CGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTGGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000578968.5 ENST00000579383.5 ENST00000580528.2 ENST00000582727.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | CTCCTTGCAACGCCTGGCCCACTCTACAGCCTCTCTTaGGGCAGGTCTACACGCCACCCCATGCCTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLATPGPLYSLS*GRSTRHPMPSG Trigger: ACCGGAAGGCATGGGGTGGCGTGTAGACCTGCCGCAAGAGAGGCTGTAGAGTGGGCCAGGCGTTGCAAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 72 bp | ACCCCTACCTGGGCTCAGGAATGGTCAGGCAACACGTaGGGCCCAGGATGGCGGTGGATGACTAGACTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TPTWAQEWSGNT*GPGWRWMTRLP Trigger: CGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTAGGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 72 bp | TTCCTGGCCTGGGCTCAGGAATGGTCAGGCAACACGTaGGGCCCAGGATGGCGGTGGATGACTAGACTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FLAWAQEWSGNT*GPGWRWMTRLP Trigger: CGGCAGTCTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGCCAGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000580458.5 |
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| CDS CCA 72 bp | AGCACGTGTAGTGAAGGCTTGGTCTCCAAGAATCACTaGTGCCCCCACTCACTGCGGCCCAGCCTCCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: STCSEGLVSKNH*CPHSLRPSLPR Trigger: GCGTGGGAGGCTGGGCCGCAGTGAGTGGGGGCACCAGTGATTCTTGGAGACCAAGCCTTCACTACACGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CCA 72 bp | GCAGCTAACACGGTCGCCTCCCAGTTTCATGGACACTaGGCTCAGGAATGGTCAGGCAACACGTGGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: AANTVASQFHGH*AQEWSGNTWGP Trigger: TGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGTGTCCATGAAACTGGGAGGCGACCGTGTTAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438705.3 |
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| CDS CAA 90 bp | GCGCTCAACCGCCTCTTGAGAGGAAGTAGCACGTGTAGTGAAGGCTaGGTCTCCAAGAATCACTGGTGCCCCCACTCACTGCGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALNRLLRGSSTCSEG*VSKNHWCPHSLRPS Trigger: GCTGGGCCGCAGTGAGTGGGGGCACCAGTGATTCTTGGAGACCAAGCCTTCACTACACGTGCTACTTCCTCTCAAGAGGCGGTTGAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS GCA 72 bp | ACGTCCCATCCCACCTACTGGGGTCCACCCAGGTCATaGAGAAGCCCCACTTCTCGGCTGAAAGAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: TSHPTYWGPPRS*RSPTSRLKEKH Trigger: GTGCTTCTCTTTCAGCCGAGAAGTGGGGCTTCTGCATGACCTGGGTGGACCCCAGTAGGTGGGATGGGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS TCA 72 bp | CCCTGCACAGGTTCCAAGGAACAGCCTGGCAGCCACTaGAGGTATCTTCTCTCAGGTCAGGTCCCCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: PCTGSKEQPGSH*RYLLSGQVPSS Trigger: GCTAGAGGGGACCTGACCTGAGAGAAGATACCTTCAGTGGCTGCCAGGCTGTTCCTTGGAACCTGTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | GTGACCCCACCACCCAGAGGAACACAGGAGCTGTGCTaGTCGTGCTATGCTCAAGCCAGCAACACTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VTPPPRGTQELC*SCYAQASNTLL Trigger: GAGAAGAGTGTTGCTGGCTTGAGCATAGCACGAGCAGCACAGCTCCTGTGTTCCTCTGGGTGGTGGGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 72 bp | GAGGTGACCCCACCACCCAGAGGAACACAGGAGCTGTaGTGCTCGTGCTATGCTCAAGCCAGCAACACTCTT | + |
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Preference number: 6 (lower is better) Translates to: EVTPPPRGTQEL*CSCYAQASNTL Trigger: AAGAGTGTTGCTGGCTTGAGCATAGCACGAGCAGCACAGCTCCTGTGTTCCTCTGGGTGGTGGGGTCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CAA 90 bp | GGGGCATCTTGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACTTaGAGACCGTCACCTCAGCCACGGCTCCCACCTGGGCTCAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GASCKGVAVTVSSST*RPSPQPRLPPGLRN Trigger: ATTCCTGAGCCCAGGTGGGAGCCGTGGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000578968.5 ENST00000579383.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | CAGGTCAGGTCCCCTCTAGCTCCAGCATCTTGGGATTaGTGCTGTAGAAACACTGACGGATGGCAGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: QVRSPLAPASWD*CCRNTDGWQAL Trigger: GAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | CTTGTGCCTCTGAACCATTATCCAGCTCTAGCTCCTTaGAACGCCTGGCCCACTCTACAGCCTCTCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LVPLNHYPALAP*NAWPTLQPLLR Trigger: CCGCAAGAGAGGCTGTAGAGTGGGCCAGGCGTTGCAAGGAGCTAGAGCTGGATAATGGTTCAGAGGCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS GCA 72 bp | CCAAGCCCCAGTTCCCATAGGGGAGTCAGAGGCACCTaGATGAGCCATTGGACTACTACAAGAAAGGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PSPSSHRGVRGT*MSHWTTTRKER Trigger: GCGCTCCTTTCTTGTAGTAGTCCAATGGCTCATGCAGGTGCCTCTGACTCCCCTATGGGAACTGGGGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000582727.2 ENST00000667119.1 ENST00000667823.1 |
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| CDS CCA 72 bp | CTGAACCATTATCCAGCTCTAGCTCCTTGCAACGCCTaGCCCACTCTACAGCCTCTCTTGCGGCAGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LNHYPALAPCNA*PTLQPLLRQVY Trigger: GTAGACCTGCCGCAAGAGAGGCTGTAGAGTGGGCCAGGCGTTGCAAGGAGCTAGAGCTGGATAATGGTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CAA 72 bp | TGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACTTaGAGACCGTCACCTCAGCCACGGCTCCCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CKGVAVTVSSST*RPSPQPRLPPG Trigger: CCCAGGTGGGAGCCGTGGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000578968.5 ENST00000579383.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | CGGATGGCAGGCACTCTTGTGCCATGTGAAGACTGCTaGAACATGAGACTCAAGGAGGGACCTCAGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RMAGTLVPCEDC*NMRLKEGPQQA Trigger: GGCCTGCTGAGGTCCCTCCTTGAGTCTCATGTTCAAGCAGTCTTCACATGGCACAAGAGTGCCTGCCATCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584327.5 ENST00000584686.1 |
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| CDS CAA 90 bp | TGGCAGCTAACACGGTCGCCTCCCAGTTTCATGGACAAAGACTGCTaGAACATGAGACTCAAGGAGGGACCTCAGCAGGCCTGGGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WQLTRSPPSFMDKDC*NMRLKEGPQQAWGV Trigger: AACACCCCAGGCCTGCTGAGGTCCCTCCTTGAGTCTCATGTTCAAGCAGTCTTTGTCCATGAAACTGGGAGGCGACCGTGTTAGCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000578968.5 ENST00000580458.5 ENST00000585030.5 ENST00000653305.1 ENST00000668580.1 |
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| CDS GCA 72 bp | TGCTGTAGAAACACTGACGGATGGCAGGCACTCTTGTaGCATGTGCTGGGTCAGGGACACAGAGTGAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CCRNTDGWQALL*HVLGQGHRVKP Trigger: TGGCTTCACTCTGTGTCCCTGACCCAGCACATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | GTCAGGTCCCCTCTAGCTCCAGCATCTTGGGATTGCTaGTGTAGAAACACTGACGGATGGCAGGCACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRSPLAPASWDC*CRNTDGWQALL Trigger: CAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 72 bp | GCATCTTGGGATTGCTGCTGTAGAAACACTGACGGATaGCAGGCACTCTTGTGCCATGTGCTGGGTCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASWDCCCRNTDG*QALLCHVLGQG Trigger: TCCCTGACCCAGCACATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 72 bp | CCCTCATTCACCCAAATCCCCCACACTCAAGGAATCTaGCAGTCCACTCTCACTAAGCACCAGTCCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSFTQIPHTQGI*QSTLTKHQSLL Trigger: CAGCAGGGACTGGTGCTTAGTGAGAGTGGACTGCCAGATTCCTTGAGTGTGGGGGATTTGGGTGAATGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CAA 72 bp | CACGGTCGCCTCCCAGTTTCATGGACACGGGGCATCTaGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HGRLPVSWTRGI*QRSCCDSKLFH Trigger: GTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGTGTCCATGAAACTGGGAGGCGACCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579383.5 |
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| CDS CAA 72 bp | CGCCTCTTGAGAGGAAGTAGCACGTGTAGTGAAGGCTaGGTCTCCAAGAATCACTGGTGCCCCCACTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLRGSSTCSEG*VSKNHWCPHSL Trigger: CAGTGAGTGGGGGCACCAGTGATTCTTGGAGACCAAGCCTTCACTACACGTGCTACTTCCTCTCAAGAGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS CAA 90 bp | GGGGCATCTTGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACTTaGAGACCGTCACCTCAGCCACGGCTCCCACCTAGAAGGGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: GASCKGVAVTVSSST*RPSPQPRLPPRREQ Trigger: TTGTTCCCTTCTAGGTGGGAGCCGTGGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS TCA 72 bp | CCGGGTAAAATGTTCCGAACGCGCTCAACCGCCTCTTaGGAGGAAGTAGCACGTGTAGTGAAGGCTTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGKMFRTRSTAS*EEVARVVKAWS Trigger: AGACCAAGCCTTCACTACACGTGCTACTTCCTCTCAAGAGGCGGTTGAGCGCGTTCGGAACATTTTACCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS GCA 72 bp | ACGGTCGCCTCCCAGTTTCATGGACACGGGGCATCTTaGAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: TVASQFHGHGAS*KGVAVTVSSST Trigger: AGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGTGTCCATGAAACTGGGAGGCGACCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579383.5 |
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| CDS GCA 72 bp | TGCAGGGTTAGAGAGGCCTGGCATCAAACCCTGATCTaGTGGTTTGTGGCTGGGCAACCCTGGACACATAAT | + |
|
Preference number: 6 (lower is better) Translates to: CRVREAWHQTLI*WFVAGQPWTHN Trigger: ATTATGTGTCCAGGGTTGCCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 72 bp | CGCAGGACTCTACCCTTTCACAACGCACAGCAAGAATaGCTGCCCTCTGCTCTGGAAGAAGGTACTAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRTLPFHNAQQE*LPSALEEGTNL Trigger: GAGGTTAGTACCTTCTTCCAGAGCAGAGGGCAGGCATTCTTGCTGTGCGTTGTGAAAGGGTAGAGTCCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000582727.2 ENST00000667119.1 ENST00000667823.1 |
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| CDS CCA 72 bp | TTCTCTCAGGTCAGGTCCCCTCTAGCTCCAGCATCTTaGGATTGCTGCTGTAGAAACACTGACGGATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FSQVRSPLAPAS*DCCCRNTDGWQ Trigger: CTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGACCTGAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | TGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACTTaGAGACCGTCACCTCAGCCACGGCTCCCACCTAGA | + |
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Preference number: 6 (lower is better) Translates to: CKGVAVTVSSST*RPSPQPRLPPR Trigger: TCTAGGTGGGAGCCGTGGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577700.5 |
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| CDS TCA 72 bp | GAAACACTGACGGATGGCAGGCACTCTTGTGCCATGTaGAGACTGCTTGAACATGAGACTCAAGGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: ETLTDGRHSCAM*RLLEHETQGGT Trigger: GGTCCCTCCTTGAGTCTCATGTTCAAGCAGTCTTCACATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584327.5 ENST00000584686.1 |
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| CDS GCA 72 bp | CCAAACTTCCCACCGGCTTCTATATTCCACTCAGGATaGAGGGTTAGAGAGGCCTGGCATCAAACCCTGATC | + |
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Preference number: 6 (lower is better) Translates to: PNFPPASIFHSG*RVREAWHQTLI Trigger: GATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCATCCTGAGTGGAATATAGAAGCCGGTGGGAAGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 72 bp | GCAACTATTCCTGGCCGGGGCATCTTGCAAAGGAGTTaGTGTGACAGTAAGCTCTTCCACTTTGAGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: ATIPGRGILQRS*CDSKLFHFETV Trigger: GACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGGCCAGGAATAGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000578968.5 ENST00000582727.2 ENST00000584327.5 ENST00000667823.1 ENST00000668580.1 |
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| CDS CCA 72 bp | AGGGTTAGAGAGGCCTGGCATCAAACCCTGATCTGCTaGTTTGTGGCTGGGCAACCCTGGACACATAATTCT | + |
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Preference number: 6 (lower is better) Translates to: RVREAWHQTLIC*FVAGQPWTHNS Trigger: AGAATTATGTGTCCAGGGTTGCCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CCA 72 bp | TCTATATTCCACTCAGGATGCAGGGTTAGAGAGGCCTaGCATCAAACCCTGATCTGCTGGTTTGTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SIFHSGCRVREA*HQTLICWFVAG Trigger: CCCAGCCACAAACCAGCAGATCAGGGTTTGATGCCAGGCCTCTCTAACCCTGCATCCTGAGTGGAATATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CAA 90 bp | GGAAGGCAGAGTTGGGGTCTCTGCAACGTGATTTACCGGGGCATCTaGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCACTTTGAGACC | + |
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Preference number: 6 (lower is better) Translates to: GRQSWGLCNVIYRGI*QRSCCDSKLFHFET Trigger: GGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGGTAAATCACGTTGCAGAGACCCCAACTCTGCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 72 bp | CCAGTTTCATGGACACGGGGCATCTTGCAAAGGAGTTaGTGTGACAGTAAGCTCTTCCACTTTGAGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: PVSWTRGILQRS*CDSKLFHFETV Trigger: GACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGTGTCCATGAAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579383.5 |
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| CDS GCA 72 bp | TTCATTCAGGAGATACCAGAAGGGCCCAGGTCCTGGTaGACAGCAAAGCTTCTCATTCTGGAAGCAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FIQEIPEGPRSW*TAKLLILEAEN Trigger: GTTCTCTGCTTCCAGAATGAGAAGCTTTGCTGTGCACCAGGACCTGGGCCCTTCTGGTATCTCCTGAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | AGTTGGGGTCTCTGCAACGTGATTTACCGGGGCATCTaGCAAAGGAGTTGCTGTGACAGTAAGCTCTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SWGLCNVIYRGI*QRSCCDSKLFH Trigger: GTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGGTAAATCACGTTGCAGAGACCCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 72 bp | TCTTCCATGAGTTTTTCCTTTAAGATGAGCACACATTaGCCTCACCCTCCACTAGCTCCTGGGGCACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSMSFSFKMSTH*PHPPLAPGALS Trigger: GCTGAGTGCCCCAGGAGCTAGTGGAGGGTGAGGTCAATGTGTGCTCATCTTAAAGGAAAAACTCATGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS GCA 72 bp | TGCAACGTGATTTACCGGGGCATCTTGCAAAGGAGTTaGTGTGACAGTAAGCTCTTCCACTTTGAGACCGTC | + |
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Preference number: 6 (lower is better) Translates to: CNVIYRGILQRS*CDSKLFHFETV Trigger: GACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGGTAAATCACGTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000584686.1 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 |
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| CDS CCA 72 bp | TTTTTCATTCAGGAGATACCAGAAGGGCCCAGGTCCTaGTGCACAGCAAAGCTTCTCATTCTGGAAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: FFIQEIPEGPRS*CTAKLLILEAE Trigger: CTCTGCTTCCAGAATGAGAAGCTTTGCTGTGCACCAGGACCTGGGCCCTTCTGGTATCTCCTGAATGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000585030.5 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | TTGTGGCTGGGCAACCCTGGACACATAATTCTGACCTaGGGCCCCTCATCTGTACTGAACTTAAAAACGACC | + |
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Preference number: 6 (lower is better) Translates to: LWLGNPGHIILT*GPSSVLNLKTT Trigger: GGTCGTTTTTAAGTTCAGTACAGATGAGGGGCCCAAGGTCAGAATTATGTGTCCAGGGTTGCCCAGCCACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CAA 90 bp | CCTGGGGCACTCAGCTCCTCTGCAGAACTGAGACTTTGGTTCTCTTaGCTTTGCCTTGTAAATATCCTATTCCATGAGTCTCTCAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGALSSSAELRLWFS*LCLVNILFHESLRA Trigger: TGCCCTGAGAGACTCATGGAATAGGATATTTACAAGGCAAAGCAAAGAGAACCAAAGTCTCAGTTCTGCAGAGGAGCTGAGTGCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS TCA 72 bp | ATTAGCCAGGTGACTCTAAATAAAACAGGAGTGAAGTaGCTTGCCAGGTCAGACCTTCCTGCACACTTACCC | + |
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Preference number: 6 (lower is better) Translates to: ISQVTLNKTGVK*LARSDLPAHLP Trigger: GGGTAAGTGTGCAGGAAGGTCTGACCTGGCAAGTCACTTCACTCCTGTTTTATTTAGAGTCACCTGGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582727.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS GCA 72 bp | GGCAACAAGCGAGGTTTCAAACTTGCTCAATTAAGGTaGCAAGGCTTGCATTCAAATTCAGCTCCACTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GNKRGFKLAQLR*QGLHSNSAPLL Trigger: GAGGAGTGGAGCTGAATTTGAATGCAAGCCTTGGCACCTTAATTGAGCAAGTTTGAAACCTCGCTTGTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS GCA 72 bp | CTCCTTCCAGAAGGGCAACAAGCGAGGTTTCAAACTTaGTCAATTAAGGTGCCAAGGCTTGCATTCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: LLPEGQQARFQT*SIKVPRLAFKF Trigger: GAATTTGAATGCAAGCCTTGGCACCTTAATTGAGCAAGTTTGAAACCTCGCTTGTTGCCCTTCTGGAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | CGAGGTTTCAAACTTGCTCAATTAAGGTGCCAAGGCTaGCATTCAAATTCAGCTCCACTCCTCACTAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RGFKLAQLRCQG*HSNSAPLLTRC Trigger: ACACCTAGTGAGGAGTGGAGCTGAATTTGAATGCAAGCCTTGGCACCTTAATTGAGCAAGTTTGAAACCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | TCCTGGGGCACTCAGCTCCTCTGCAGAACTGAGACTTaGGTTCTCTTTGCTTTGCCTTGTAAATATCCTATT | + |
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Preference number: 6 (lower is better) Translates to: SWGTQLLCRTET*VLFALPCKYPI Trigger: AATAGGATATTTACAAGGCAAAGCAAAGAGAACCAAAGTCTCAGTTCTGCAGAGGAGCTGAGTGCCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000653305.1 ENST00000667119.1 |
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| CDS CAA 90 bp | GGCAACAAGCGAGGTTTCAAACTTGCTCAATTAAGGTGCCAAGGCTaGCATTCAAATTCAGCTCCACTCCTCACTAGGTGTATTAACACA | + |
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Preference number: 6 (lower is better) Translates to: GNKRGFKLAQLRCQG*HSNSAPLLTRCINT Trigger: TGTGTTAATACACCTAGTGAGGAGTGGAGCTGAATTTGAATGCAAGCCTTGGCACCTTAATTGAGCAAGTTTGAAACCTCGCTTGTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000438705.3 ENST00000577700.5 ENST00000578968.5 ENST00000579383.5 ENST00000580458.5 ENST00000580528.2 ENST00000582727.2 ENST00000584327.5 ENST00000585030.5 ENST00000653305.1 ENST00000667119.1 ENST00000667823.1 ENST00000668580.1 |
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| CDS CAA 72 bp | ATAATTGACACAACTAGGGATTATTACAAACCCCTGTaGCCATCGGTGGCAACAACAGAACTGAACCCTACT | + |
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Preference number: 6 (lower is better) Translates to: IIDTTRDYYKPL*PSVATTELNPT Trigger: AGTAGGGTTCAGTTCTGTTGTTGCCACCGATGGCAACAGGGGTTTGTAATAATCCCTAGTTGTGTCAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582727.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS CAA 90 bp | TTAAGTGACATAATTGACACAACTAGGGATTATTACAAACCCCTGTaGCCATCGGTGGCAACAACAGAACTGAACCCTACTTACCAACTC | + |
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Preference number: 6 (lower is better) Translates to: LSDIIDTTRDYYKPL*PSVATTELNPTYQL Trigger: GAGTTGGTAAGTAGGGTTCAGTTCTGTTGTTGCCACCGATGGCAACAGGGGTTTGTAATAATCCCTAGTTGTGTCAATTATGTCACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000582727.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS TCA 72 bp | CTTGAAGACAATGAACCTTTCTGGGATTCAATCACCTaGCTTACCATACGGGAAGGTCAAAATACTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LEDNEPFWDSIT*LTIREGQNTFH Trigger: ATGAAAAGTATTTTGACCTTCCCGTATGGTAAGTCAGGTGATTGAATCCCAGAAAGGTTCATTGTCTTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000582727.2 ENST00000667119.1 ENST00000668580.1 |
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| CDS TCA 72 bp | AAATACAAAATTCCTCGATTAGGGACAAGGGACCACTaGTTATTCAAAACAATAGCAATAGCCAGAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: KYKIPRLGTRDH*LFKTIAIARAS Trigger: TGATGCTCTGGCTATTGCTATTGTTTTGAATAATCAGTGGTCCCTTGTCCCTAATCGAGGAATTTTGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000577700.5 ENST00000580528.2 ENST00000582727.2 ENST00000667119.1 ENST00000667823.1 |
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