Pregenerated sensors for SNHG11 (Homo sapiens)
Ensembl gene IDs: ENSG00000174365Ensembl transcript IDs: ENST00000359074.9, ENST00000400436.6, ENST00000418383.2, ENST00000420006.5, ENST00000421599.5, ENST00000432153.6, ENST00000434729.6, ENST00000437028.5, ENST00000440918.6, ENST00000442419.2, ENST00000444816.2, ENST00000449351.5, ENST00000453698.6, ENST00000457218.5, ENST00000483342.6, ENST00000656427.1, ENST00000656502.1, ENST00000656815.1, ENST00000656824.1, ENST00000657911.1, ENST00000658222.1, ENST00000659148.1, ENST00000659610.1, ENST00000660281.1, ENST00000660884.1, ENST00000661078.1, ENST00000661378.1, ENST00000661733.1, ENST00000663763.1, ENST00000666020.1, ENST00000666350.1, ENST00000666813.1, ENST00000667760.1, ENST00000669083.1, ENST00000669207.1, ENST00000669338.1, ENST00000669976.1, ENST00000670145.1, ENST00000670898.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCTCTAGTGCTCAGCGCCCGCGGAAATACGGCTGGGGGCGCGGCTaGAGCCTAGAGCGGCGCTTCCGCCGGGCCCCTGCCCAAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LSSAQRPRKYGWGRG*SLERRFRRAPAQAD Trigger: GTCTGCTTGGGCAGGGGCCCGGCGGAAGCGCCGCTCTAGGCTGCAGCCGCGCCCCCAGCCGTATTTCCGCGGGCGCTGAGCACTAGAGAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000453698.6 |
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| CDS GCA 90 bp | TTGGGAGGCCACCAGGGGTTCTTGGGAAGACCACTCCTCGGGCCCTaGCCCTCATTGACTCATCCGGAGCGCCAGGACGGATGGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LGGHQGFLGRPLLGP*PSLTHPERQDGWRR Trigger: CCGCCGCCATCCGTCCTGGCGCTCCGGATGAGTCAATGAGGGGCAGGGCCCGAGGAGTGGTCTTCCCAAGAACCCCTGGTGGCCTCCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 29 transcripts: ENST00000359074.9 ENST00000400436.6 ENST00000420006.5 ENST00000421599.5 ENST00000432153.6 ENST00000434729.6 ENST00000437028.5 ENST00000440918.6 ENST00000449351.5 ENST00000453698.6 ENST00000483342.6 ENST00000656427.1 ENST00000656815.1 ENST00000656824.1 ENST00000657911.1 ENST00000659610.1 ENST00000660281.1 ENST00000661078.1 ENST00000661378.1 ENST00000661733.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000667760.1 ENST00000669083.1 ENST00000669338.1 ENST00000669976.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS TCA 90 bp | CCTCTGCACACAGTGGACTATCTGCAACAGATAAGATGCCATGAGTaGGCACCCAGCTTGTCCCTGCTCGCAGCAGGGATGGCAGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: PLHTVDYLQQIRCHE*APSLSLLAAGMAGN Trigger: GTTGCCTGCCATCCCTGCTGCGAGCAGGGACAAGCTGGGTGCTCACTCATGGCATCTTATCTGTTGCAGATAGTCCACTGTGTGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS TCA 90 bp | CATGCCTCTGCACACAGTGGACTATCTGCAACAGATAAGATGCCATaGGTGAGCACCCAGCTTGTCCCTGCTCGCAGCAGGGATGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HASAHSGLSATDKMP*VSTQLVPARSRDGR Trigger: CCTGCCATCCCTGCTGCGAGCAGGGACAAGCTGGGTGCTCACTCATGGCATCTTATCTGTTGCAGATAGTCCACTGTGTGCAGAGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS GCA 90 bp | GCAGAAAAGAGCAAAGGGGATCCAGGAACAGAGGCCAAAGTGAGCTaGCTGGAGATTGCCAAAGCGCCAAGCCCAAAGGACCTGAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: AEKSKGDPGTEAKVS*LEIAKAPSPKDLSA Trigger: AGCGCTCAGGTCCTTTGGGCTTGGCGCTTTGGCAATCTCCAGGCAGCTCACTTTGGCCTCTGTTCCTGGATCCCCTTTGCTCTTTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000400436.6 ENST00000418383.2 ENST00000432153.6 ENST00000440918.6 ENST00000442419.2 ENST00000656824.1 ENST00000658222.1 ENST00000659148.1 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000666813.1 ENST00000669207.1 ENST00000670145.1 |
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| CDS CCA 90 bp | CGACCTGGAATTTCCACCTCGGAAACACAGGCCAACTTAACCTCTTaGCATTCACTTACCATGAGGAGGCCCCTCCAGGGGAGCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: RPGISTSETQANLTS*HSLTMRRPLQGSWD Trigger: GTCCCAGCTCCCCTGGAGGGGCCTCCTCATGGTAAGTGAATGCCAAGAGGTTAAGTTGGCCTGTGTTTCCGAGGTGGAAATTCCAGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000437028.5 ENST00000442419.2 ENST00000453698.6 ENST00000656427.1 ENST00000661078.1 ENST00000661733.1 ENST00000666813.1 ENST00000669338.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS TCA 90 bp | AGGCAGCATCCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACCAGGGACATCCTC | + |
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Preference number: 5 (lower is better) Translates to: RQHPSRILRSSMFPT*QLPCLCTQWTRDIL Trigger: GAGGATGTCCCTGGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGGATGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421599.5 |
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| CDS TCA 90 bp | GAAACAGATGCCAGCAGCTTGTGGACTAGGTCCAGTCCAGGAAAATaGTCCAGCCCAGCACAGGATCCCAAAAGTGGCCCTGCTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ETDASSLWTRSSPGK*SSPAQDPKSGPAFL Trigger: CAGGAAAGCAGGGCCACTTTTGGGATCCTGTGCTGGGCTGGATCATTTTCCTGGACTGGACCTAGTCCACAAGCTGCTGGCATCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656502.1 ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS TCA 90 bp | AGGCAGCATCCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGAGAATGCAGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: RQHPSRILRSSMFPT*QLPCLCTQWRMQAQ Trigger: CTGCGCCTGCATTCTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGGATGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658222.1 |
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| CDS GCA 90 bp | AGGAGAATGAAAGAACTTAGCCAGGCTCTCCTCTGCACCCGGCTTTaGCATACAGTTCTCGGAATTCATGACCATGCCCTCCGCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RRMKELSQALLCTRL*HTVLGIHDHALRWG Trigger: ACCCCAGCGGAGGGCATGGTCATGAATTCCGAGAACTGTATGGCAAAGCCGGGTGCAGAGGAGAGCCTGGCTAAGTTCTTTCATTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS GCA 90 bp | CAAAGGGGATCCAGGAACAGAGGCCAAAGTGAGCTGCCTGGAGATTaGCAAAGCGCCAAGCCCAAAGGACCTGAGCGCTATCCACTTAAT | + |
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Preference number: 5 (lower is better) Translates to: QRGSRNRGQSELPGD*QSAKPKGPERYPLN Trigger: ATTAAGTGGATAGCGCTCAGGTCCTTTGGGCTTGGCGCTTTGGCAATCTCCAGGCAGCTCACTTTGGCCTCTGTTCCTGGATCCCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 19 transcripts: ENST00000400436.6 ENST00000418383.2 ENST00000432153.6 ENST00000440918.6 ENST00000442419.2 ENST00000656824.1 ENST00000658222.1 ENST00000659148.1 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000666813.1 ENST00000669207.1 ENST00000670145.1 |
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| CDS CCA 90 bp | AGAAGGTCCAGCCATGAGTCACAGGGTGACATCACTCGTCACTCTTaGTCTGTGATCAACCCCCAAACAATCATGAGGAGGCCCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRSSHESQGDITRHS*SVINPQTIMRRPLQ Trigger: CTGGAGGGGCCTCCTCATGATTGTTTGGGGGTTGATCACAGACCAAGAGTGACGAGTGATGTCACCCTGTGACTCATGGCTGGACCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 28 transcripts: ENST00000359074.9 ENST00000400436.6 ENST00000418383.2 ENST00000421599.5 ENST00000432153.6 ENST00000434729.6 ENST00000440918.6 ENST00000444816.2 ENST00000449351.5 ENST00000457218.5 ENST00000483342.6 ENST00000656502.1 ENST00000656815.1 ENST00000656824.1 ENST00000657911.1 ENST00000658222.1 ENST00000659148.1 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661378.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000667760.1 ENST00000669083.1 ENST00000669207.1 ENST00000669976.1 |
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| CDS TCA 90 bp | AGGCAGCATCCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATCCAGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: RQHPSRILRSSMFPT*QLPCLCTQWTIQGH Trigger: ATGTCCCTGGATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGGATGCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000359074.9 ENST00000420006.5 ENST00000457218.5 ENST00000483342.6 ENST00000656815.1 ENST00000669083.1 ENST00000669338.1 ENST00000670898.1 |
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| CDS TCA 90 bp | AGGCAGCATCCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATGAATGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RQHPSRILRSSMFPT*QLPCLCTQWTMNAG Trigger: GCCTGCATTCATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGGATGCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000418383.2 ENST00000432153.6 ENST00000440918.6 ENST00000442419.2 ENST00000659148.1 ENST00000666020.1 |
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| CDS TCA 90 bp | CTTTCTTCAAGCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACCAGGGACATCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSSSSRILRSSMFPT*QLPCLCTQWTRDIL Trigger: GAGGATGTCCCTGGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGCTTGAAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434729.6 ENST00000437028.5 |
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| CDS TCA 90 bp | AGGCAGCATCCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATCTGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: RQHPSRILRSSMFPT*QLPCLCTQWTICNR Trigger: TCTGTTGCAGATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGGATGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS GCA 90 bp | AAAGTCAAGCTCAGGAGAATGAAAGAACTTAGCCAGGCTCTCCTCTaGACCCGGCTTTGCCATACAGTTCTCGGAATTCATGACCATGCC | + |
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Preference number: 5 (lower is better) Translates to: KVKLRRMKELSQALL*TRLCHTVLGIHDHA Trigger: GGCATGGTCATGAATTCCGAGAACTGTATGGCAAAGCCGGGTGCAGAGGAGAGCCTGGCTAAGTTCTTTCATTCTCCTGAGCTTGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS TCA 90 bp | CTTTCTTCAAGCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATCCAGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: LSSSSRILRSSMFPT*QLPCLCTQWTIQGH Trigger: ATGTCCCTGGATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGCTTGAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000449351.5 ENST00000453698.6 ENST00000656427.1 ENST00000657911.1 ENST00000667760.1 |
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| CDS TCA 90 bp | CTTTCTTCAAGCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATGAATGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSSSSRILRSSMFPT*QLPCLCTQWTMNAG Trigger: GCCTGCATTCATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGCTTGAAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656824.1 ENST00000661378.1 ENST00000666350.1 ENST00000669207.1 |
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| CDS TCA 90 bp | AGAGATCTTACCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATCCAGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: RDLTSRILRSSMFPT*QLPCLCTQWTIQGH Trigger: ATGTCCCTGGATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGTAAGATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661733.1 ENST00000669976.1 |
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| CDS TCA 90 bp | CTTTCTTCAAGCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATCTGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: LSSSSRILRSSMFPT*QLPCLCTQWTICNR Trigger: TCTGTTGCAGATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGCTTGAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400436.6 |
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| CDS TCA 90 bp | AGAGATCTTACCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATCTGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: RDLTSRILRSSMFPT*QLPCLCTQWTICNR Trigger: TCTGTTGCAGATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGTAAGATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659610.1 ENST00000663763.1 |
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| CDS GCA 90 bp | CTGATGTCAATGGGAATGCCCCCAGTTAATCAATCAGGTATGAGTTaGCAGTTTCTTTCATACCAAACTCATCTCAAAAAGGAATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: LMSMGMPPVNQSGMS*QFLSYQTHLKKESQ Trigger: TTGAGATTCCTTTTTGAGATGAGTTTGGTATGAAAGAAACTGGCAACTCATACCTGATTGATTAACTGGGGGCATTCCCATTGACATCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS GCA 72 bp | GCTCAGCGCCCGCGGAAATACGGCTGGGGGCGCGGCTaGAGCCTAGAGCGGCGCTTCCGCCGGGCCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AQRPRKYGWGRG*SLERRFRRAPA Trigger: GGCAGGGGCCCGGCGGAAGCGCCGCTCTAGGCTGCAGCCGCGCCCCCAGCCGTATTTCCGCGGGCGCTGAGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000453698.6 ENST00000483342.6 ENST00000656815.1 |
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| CDS CAA 90 bp | GCCGCACAGCCCACGAGGCCGGCCTTGGGAGGCCACCAGGGGTTCTaGGGAAGACCACTCCTCGGGCCCTGCCCCTCATTGACTCATCCG | + |
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Preference number: 6 (lower is better) Translates to: AAQPTRPALGGHQGF*GRPLLGPCPSLTHP Trigger: CGGATGAGTCAATGAGGGGCAGGGCCCGAGGAGTGGTCTTCCCAAGAACCCCTGGTGGCCTCCCAAGGCCGGCCTCGTGGGCTGTGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440918.6 ENST00000449351.5 |
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| CDS CAA 72 bp | CCCACGAGGCCGGCCTTGGGAGGCCACCAGGGGTTCTaGGGAAGACCACTCCTCGGGCCCTGCCCCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: PTRPALGGHQGF*GRPLLGPCPSL Trigger: CAATGAGGGGCAGGGCCCGAGGAGTGGTCTTCCCAAGAACCCCTGGTGGCCTCCCAAGGCCGGCCTCGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000440918.6 ENST00000449351.5 |
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| CDS CAA 90 bp | CACCAGGGGTTCTTGGGAAGACCACTCCTCGGGCCCTGCCCCTCATaGACTCATCCGGAGCGCCAGGACGGATGGCGGCGGGTACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HQGFLGRPLLGPCPS*THPERQDGWRRVQG Trigger: CCCCTGTACCCGCCGCCATCCGTCCTGGCGCTCCGGATGAGTCAATGAGGGGCAGGGCCCGAGGAGTGGTCTTCCCAAGAACCCCTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 29 transcripts: ENST00000359074.9 ENST00000400436.6 ENST00000420006.5 ENST00000421599.5 ENST00000432153.6 ENST00000434729.6 ENST00000437028.5 ENST00000440918.6 ENST00000449351.5 ENST00000453698.6 ENST00000483342.6 ENST00000656427.1 ENST00000656815.1 ENST00000656824.1 ENST00000657911.1 ENST00000659610.1 ENST00000660281.1 ENST00000661078.1 ENST00000661378.1 ENST00000661733.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000667760.1 ENST00000669083.1 ENST00000669338.1 ENST00000669976.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS GCA 72 bp | CACCAGGGGTTCTTGGGAAGACCACTCCTCGGGCCCTaGCCCTCATTGACTCATCCGGAGCGCCAGGACGGA | + |
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Preference number: 6 (lower is better) Translates to: HQGFLGRPLLGP*PSLTHPERQDG Trigger: TCCGTCCTGGCGCTCCGGATGAGTCAATGAGGGGCAGGGCCCGAGGAGTGGTCTTCCCAAGAACCCCTGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 30 transcripts: ENST00000359074.9 ENST00000400436.6 ENST00000420006.5 ENST00000421599.5 ENST00000432153.6 ENST00000434729.6 ENST00000437028.5 ENST00000440918.6 ENST00000449351.5 ENST00000453698.6 ENST00000483342.6 ENST00000656427.1 ENST00000656815.1 ENST00000656824.1 ENST00000657911.1 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000661733.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000667760.1 ENST00000669083.1 ENST00000669338.1 ENST00000669976.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS GCA 72 bp | GTTGGCTGGGTGGACAGCGGATCTGGGGACCCACAGTaGCATTCTCATCTCACCTCTCAGCTCCCCTACACC | + |
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Preference number: 6 (lower is better) Translates to: VGWVDSGSGDPQ*HSHLTSQLPYT Trigger: GGTGTAGGGGAGCTGAGAGGTGAGATGAGAATGGCACTGTGGGTCCCCAGATCCGCTGTCCACCCAGCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS CCA 72 bp | AAGGCACAGGAAAGGCCAGAGGTGATCTGGGTTGGCTaGGTGGACAGCGGATCTGGGGACCCACAGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: KAQERPEVIWVG*VDSGSGDPQCH Trigger: ATGGCACTGTGGGTCCCCAGATCCGCTGTCCACCCAGCCAACCCAGATCACCTCTGGCCTTTCCTGTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656502.1 ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS CCA 72 bp | TGGCAAAGGAGTCTGGAATTCGCCCCTCTGGGGCCCTaGGAGCGTCCTCCATTTAAACCTCAGCCAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: WQRSLEFAPLGP*ERPPFKPQPTG Trigger: ACCAGTTGGCTGAGGTTTAAATGGAGGACGCTCCCAGGGCCCCAGAGGGGCGAATTCCAGACTCCTTTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000400436.6 ENST00000418383.2 ENST00000457218.5 ENST00000483342.6 ENST00000658222.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666813.1 ENST00000669207.1 ENST00000669338.1 ENST00000669976.1 |
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| CDS CAA 90 bp | GCGACCTGGAATTTCCACCTCGGAAACACAGGCCAACTTAACCTCTaGGCATTCACTTACCATGAGGAGGCCCCTCCAGGGGAGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ATWNFHLGNTGQLNL*AFTYHEEAPPGELG Trigger: TCCCAGCTCCCCTGGAGGGGCCTCCTCATGGTAAGTGAATGCCAAGAGGTTAAGTTGGCCTGTGTTTCCGAGGTGGAAATTCCAGGTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000437028.5 ENST00000442419.2 ENST00000453698.6 ENST00000656427.1 ENST00000661078.1 ENST00000661733.1 ENST00000666813.1 ENST00000669338.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS TCA 72 bp | GCACACAGTGGACTATCTGCAACAGATAAGATGCCATaGGTGAGCACCCAGCTTGTCCCTGCTCGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AHSGLSATDKMP*VSTQLVPARSR Trigger: CCTGCTGCGAGCAGGGACAAGCTGGGTGCTCACTCATGGCATCTTATCTGTTGCAGATAGTCCACTGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS TCA 72 bp | ACCCAAGGCAGCATCCACAACATCCTGCAATGCTCCTaGGACCAGAAGGTGCTGGCAGGAGAGAAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: TQGSIHNILQCS*DQKVLAGEKEC Trigger: ACACTCCTTCTCTCCTGCCAGCACCTTCTGGTCTCAGGAGCATTGCAGGATGTTGTGGATGCTGCCTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444816.2 |
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| CDS TCA 72 bp | AAAAGAGCAAAGGGGATCCAGGAACAGAGGCCAAAGTaGGCTGCCTGGAGATTGCCAAAGCGCCAAGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: KRAKGIQEQRPK*AAWRLPKRQAQ Trigger: TTGGGCTTGGCGCTTTGGCAATCTCCAGGCAGCTCACTTTGGCCTCTGTTCCTGGATCCCCTTTGCTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 19 transcripts: ENST00000400436.6 ENST00000418383.2 ENST00000432153.6 ENST00000440918.6 ENST00000442419.2 ENST00000656824.1 ENST00000658222.1 ENST00000659148.1 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000666813.1 ENST00000669207.1 ENST00000670145.1 |
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| CDS TCA 72 bp | ACAGTGGACTATCTGCAACAGATAAGATGCCATGAGTaGGCACCCAGCTTGTCCCTGCTCGCAGCAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: TVDYLQQIRCHE*APSLSLLAAGM Trigger: CATCCCTGCTGCGAGCAGGGACAAGCTGGGTGCTCACTCATGGCATCTTATCTGTTGCAGATAGTCCACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS TCA 72 bp | CCCATCACTCACTCACACAACATCCTGCAATGCTCCTaGGACCAGAAGGTGCTGGCAGGAGAGAAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PITHSHNILQCS*DQKVLAGEKEC Trigger: ACACTCCTTCTCTCCTGCCAGCACCTTCTGGTCTCAGGAGCATTGCAGGATGTTGTGTGAGTGAGTGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS GCA 72 bp | AAAGAACTTAGCCAGGCTCTCCTCTGCACCCGGCTTTaGCATACAGTTCTCGGAATTCATGACCATGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: KELSQALLCTRL*HTVLGIHDHAL Trigger: GAGGGCATGGTCATGAATTCCGAGAACTGTATGGCAAAGCCGGGTGCAGAGGAGAGCCTGGCTAAGTTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS GCA 72 bp | CTAAAGTGTCTCCCATCACTCACTCACACAACATCCTaGAATGCTCCTGAGACCAGAAGGTGCTGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LKCLPSLTHTTS*NAPETRRCWQE Trigger: CTCCTGCCAGCACCTTCTGGTCTCAGGAGCATTGCAGGATGTTGTGTGAGTGAGTGATGGGAGACACTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS TCA 72 bp | CCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATC | + |
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Preference number: 6 (lower is better) Translates to: PSRILRSSMFPT*QLPCLCTQWTI Trigger: GATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359074.9 ENST00000420006.5 ENST00000457218.5 ENST00000483342.6 ENST00000656815.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000666813.1 ENST00000669083.1 ENST00000669338.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS TCA 72 bp | CCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATG | + |
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Preference number: 6 (lower is better) Translates to: PSRILRSSMFPT*QLPCLCTQWTM Trigger: CATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000418383.2 ENST00000432153.6 ENST00000440918.6 ENST00000442419.2 ENST00000659148.1 ENST00000666020.1 |
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| CDS TCA 72 bp | GTCGTCTTTCTTCAAGACAACATCCTGCAATGCTCCTaGGACCAGAAGGTGCTGGCAGGAGAGAAGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VVFLQDNILQCS*DQKVLAGEKEC Trigger: ACACTCCTTCTCTCCTGCCAGCACCTTCTGGTCTCAGGAGCATTGCAGGATGTTGTCTTGAAGAAAGACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656502.1 |
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| CDS TCA 72 bp | CCCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: PSRILRSSMFPT*QLPCLCTQWRM Trigger: CATTCTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658222.1 |
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| CDS GCA 72 bp | CTACACATCTGTCTCCCTGGTGGGACTAGACACTCTTaGTCATCCCAGACTCAAAGACCTTCTCATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LHICLPGGTRHS*SSQTQRPSHAA Trigger: AGCAGCATGAGAAGGTCTTTGAGTCTGGGATGAGCAAGAGTGTCTAGTCCCACCAGGGAGACAGATGTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS CCA 72 bp | AGCCATGAGTCACAGGGTGACATCACTCGTCACTCTTaGTCTGTGATCAACCCCCAAACAATCATGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SHESQGDITRHS*SVINPQTIMRR Trigger: CCTCCTCATGATTGTTTGGGGGTTGATCACAGACCAAGAGTGACGAGTGATGTCACCCTGTGACTCATGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 28 transcripts: ENST00000359074.9 ENST00000400436.6 ENST00000418383.2 ENST00000421599.5 ENST00000432153.6 ENST00000434729.6 ENST00000440918.6 ENST00000444816.2 ENST00000449351.5 ENST00000457218.5 ENST00000483342.6 ENST00000656502.1 ENST00000656815.1 ENST00000656824.1 ENST00000657911.1 ENST00000658222.1 ENST00000659148.1 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661378.1 ENST00000663763.1 ENST00000666020.1 ENST00000666350.1 ENST00000667760.1 ENST00000669083.1 ENST00000669207.1 ENST00000669976.1 |
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| CDS CCA 72 bp | AAAGGAGATCAAAACCAGGTTTACAGCAGTGTGCCATaGCTGAGTGGCAGTGACTCTGCTGGTCATCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: KGDQNQVYSSVP*LSGSDSAGHQG Trigger: CCCTTGATGACCAGCAGAGTCACTGCCACTCAGCCATGGCACACTGCTGTAAACCTGGTTTTGATCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS TCA 72 bp | AGCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATC | + |
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Preference number: 6 (lower is better) Translates to: SSRILRSSMFPT*QLPCLCTQWTI Trigger: GATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000400436.6 ENST00000449351.5 ENST00000453698.6 ENST00000656427.1 ENST00000657911.1 ENST00000667760.1 |
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| CDS TCA 72 bp | AGCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATG | + |
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Preference number: 6 (lower is better) Translates to: SSRILRSSMFPT*QLPCLCTQWTM Trigger: CATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656824.1 ENST00000661378.1 ENST00000666350.1 ENST00000669207.1 |
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| CDS TCA 72 bp | ACCTCAAGGATACTGAGGTCTAGCATGTTCCCAACATaGCAACTCCCATGCCTCTGCACACAGTGGACTATC | + |
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Preference number: 6 (lower is better) Translates to: TSRILRSSMFPT*QLPCLCTQWTI Trigger: GATAGTCCACTGTGTGCAGAGGCATGGGAGTTGTCATGTTGGGAACATGCTAGACCTCAGTATCCTTGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS GCA 72 bp | CTCAGGAGAATGAAAGAACTTAGCCAGGCTCTCCTCTaGACCCGGCTTTGCCATACAGTTCTCGGAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: LRRMKELSQALL*TRLCHTVLGIH Trigger: ATGAATTCCGAGAACTGTATGGCAAAGCCGGGTGCAGAGGAGAGCCTGGCTAAGTTCTTTCATTCTCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000400436.6 ENST00000659610.1 ENST00000660281.1 ENST00000660884.1 ENST00000661078.1 ENST00000661378.1 ENST00000663763.1 ENST00000666813.1 ENST00000670145.1 |
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| CDS TCA 72 bp | TCCAGCAAAACTGTCTTAAGAGTCTTAACAGGCAACTaGGCAGATGTGCAACTGGCAGAAAGACAGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SSKTVLRVLTGN*ADVQLAERQLK Trigger: CTTGAGCTGTCTTTCTGCCAGTTGCACATCTGCTCAGTTGCCTGTTAAGACTCTTAAGACAGTTTTGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS TCA 72 bp | ACTTGGTCTCCAGTGTTCTGTCGTCTTTCTTCAAGCTaGTGTCAATGGGAATGCCCCCAGTTAATCAATCAG | + |
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Preference number: 6 (lower is better) Translates to: TWSPVFCRLSSS*CQWECPQLINQ Trigger: CTGATTGATTAACTGGGGGCATTCCCATTGACATCAGCTTGAAGAAAGACGACAGAACACTGGAGACCAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS TCA 72 bp | GAAAGAACAAGCAGCAGGGCATGTTTCAAGATTTATTaGGTGGGTGAGAGGACAATGGTCCATAGCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: ERTSSRACFKIY*VGERTMVHSTE Trigger: TTCTGTGCTATGGACCATTGTCCTCTCACCCACTCAATAAATCTTGAAACATGCCCTGCTGCTTGTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000418383.2 ENST00000444816.2 ENST00000656815.1 ENST00000657911.1 ENST00000659148.1 ENST00000669976.1 |
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| CDS TCA 72 bp | AGTCACAGGGTGACATCACTCGTCACTCTTGGTCTGTaGTCAACCCCCAAACAATCTAAAAGAGAAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: SHRVTSLVTLGL*STPKQSKREDK Trigger: TTTGTCTTCTCTTTTAGATTGTTTGGGGGTTGATCACAGACCAAGAGTGACGAGTGATGTCACCCTGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000437028.5 ENST00000442419.2 ENST00000453698.6 ENST00000656427.1 ENST00000661078.1 ENST00000661733.1 ENST00000666813.1 ENST00000669338.1 ENST00000670145.1 ENST00000670898.1 |
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| CDS GCA 72 bp | ATGGGAATGCCCCCAGTTAATCAATCAGGTATGAGTTaGCAGTTTCTTTCATACCAAACTCATCTCAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: MGMPPVNQSGMS*QFLSYQTHLKK Trigger: CTTTTTGAGATGAGTTTGGTATGAAAGAAACTGGCAACTCATACCTGATTGATTAACTGGGGGCATTCCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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| CDS CCA 72 bp | ATCGGAAAATATTGGTTGGTAATGATAGGAATCATATaGTCTCAAGTACCACAAAAGTCACCTCTATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: IGKYWLVMIGII*SQVPQKSPLSE Trigger: TTCTGATAGAGGTGACTTTTGTGGTACTTGAGACCATATGATTCCTATCATTACCAACCAATATTTTCCGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656502.1 ENST00000659610.1 ENST00000661733.1 ENST00000663763.1 ENST00000669976.1 |
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