Pregenerated sensors for SNHG10 (Homo sapiens)
Ensembl gene IDs: ENSG00000247092Ensembl transcript IDs: ENST00000500370.2, ENST00000553559.1, ENST00000554169.1, ENST00000654925.1, ENST00000658932.1, ENST00000660378.1, ENST00000663212.1, ENST00000667310.1, ENST00000667668.1, ENST00000671157.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGGAGCCAGGGAAAGTCCAGGAGCCAAGGCTACGGCCCGAGCGCTaGAACCCCGGTCAGGCTCCGGCTCCCCGCCACGACGAACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: AEPGKVQEPRLRPER*NPGQAPAPRHDELH Trigger: ATGCAGTTCGTCGTGGCGGGGAGCCGGAGCCTGACCGGGGTTCCAGCGCTCGGGCCGTAGCCTTGGCTCCTGGACTTTCCCTGGCTCCGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500370.2 ENST00000667310.1 |
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| CDS TCA 90 bp | AATTCAACCGCCGCTGACACCGGAACCGGAAACTTCATCAGGAGGTaGCCCCTTCCCGGCGTTCCGCGGAACGGGCGAGTCCCGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: NSTAADTGTGNFIRR*PLPGVPRNGRVPRL Trigger: GAGGCGCGGGACTCGCCCGTTCCGCGGAACGCCGGGAAGGGGTCACCTCCTGATGAAGTTTCCGGTTCCGGTGTCAGCGGCGGTTGAATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000553559.1 ENST00000660378.1 |
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| CDS CCA 90 bp | TCTCATTTCTCACGATGGGTCCAAGCTTTGGGCACCAGGTCTCCCTaGACATTCCGCGCTGGCACTGCGCCTAGCACCCAGCGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SHFSRWVQALGTRSP*TFRAGTAPSTQRLL Trigger: GAGCAGCCGCTGGGTGCTAGGCGCAGTGCCAGCGCGGAATGTCCAGGGAGACCTGGTGCCCAAAGCTTGGACCCATCGTGAGAAATGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554169.1 ENST00000654925.1 ENST00000667310.1 ENST00000667668.1 |
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| CDS GCA 90 bp | GCTACCTCCCAAGAGACCAACACGACAAGCGCGCGCCCACCGCATTaGCATGGCAATTCAACCGCCGCTGACACCGGAACCGGAAACTTC | + |
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Preference number: 5 (lower is better) Translates to: ATSQETNTTSARPPH*HGNSTAADTGTGNF Trigger: GAAGTTTCCGGTTCCGGTGTCAGCGGCGGTTGAATTGCCATGGCAATGCGGTGGGCGCGCGCTTGTCGTGTTGGTCTCTTGGGAGGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500370.2 |
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| CDS GCA 90 bp | AGCTCCCTGGATCAACATCTCCTGACTTGCTGTCTCTCTGAGCTCTaGATTTCCCAGTCGGCTGGGCAGAGGCGAGCCATCTCACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSLDQHLLTCCLSEL*ISQSAGQRRAISPP Trigger: AGGAGGTGAGATGGCTCGCCTCTGCCCAGCCGACTGGGAAATGCAGAGCTCAGAGAGACAGCAAGTCAGGAGATGTTGATCCAGGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 90 bp | TGGCCTCATTGGCTCACAGGAGGAAAGTCGTCTTCCCTCTTGTTTTaGCTCTCGTTGCCCTGCAAGCGTGACCCTGATGGACATCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: WPHWLTGGKSSSLLF*LSLPCKRDPDGHPV Trigger: GACTGGATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCAATGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS CCA 90 bp | CACATGGAACAGCTGGCTCTCGAGCAGGCATGCCTCAGCTTCCTCTaGAGTATGCTTTTTCTGCAAGTCTGGTGTGCTCGAGGGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: HMEQLALEQACLSFL*SMLFLQVWCARGYH Trigger: GTGGTACCCTCGAGCACACCAGACTTGCAGAAAAAGCATACTCCAGAGGAAGCTGAGGCATGCCTGCTCGAGAGCCAGCTGTTCCATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS TCA 90 bp | ACCCAGCTATTATGTGACTCACCTAGGGTACACACTCAGGCAGTCTaGCCCCAGCACCCACTCCATCGCTGTGGATTCTGTCTCATAGCA | + |
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Preference number: 5 (lower is better) Translates to: TQLLCDSPRVHTQAV*PQHPLHRCGFCLIA Trigger: TGCTATGAGACAGAATCCACAGCGATGGAGTGGGTGCTGGGGTCAGACTGCCTGAGTGTGTACCCTAGGTGAGTCACATAATAGCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 90 bp | GGCTCACAGGAGGAAAGTCGTCTTCCCTCTTGTTTTGCCTCTCGTTaGCCTGCAAGCGTGACCCTGATGGACATCCAGTCTCTCCAATTA | + |
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Preference number: 5 (lower is better) Translates to: GSQEESRLPSCFASR*PASVTLMDIQSLQL Trigger: TAATTGGAGAGACTGGATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS GCA 90 bp | GCTTTTTCTGCAAGTCTGGTGTGCTCGAGGGTACCACCAACCCTGTaGGGCTCCAAGACTACAGATTATGTAGCAAGTCCACTGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AFSASLVCSRVPPTL*GSKTTDYVASPLVL Trigger: CAGGACCAGTGGACTTGCTACATAATCTGTAGTCTTGGAGCCGCACAGGGTTGGTGGTACCCTCGAGCACACCAGACTTGCAGAAAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS CCA 90 bp | CACCGTGGCAACAGTGACCAGAAACTATCAGAGGAAAATTGCACATaGAACAGCTGGCTCTCGAGCAGGCATGCCTCAGCTTCCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: HRGNSDQKLSEENCT*NSWLSSRHASASSG Trigger: TCCAGAGGAAGCTGAGGCATGCCTGCTCGAGAGCCAGCTGTTCCATGTGCAATTTTCCTCTGATAGTTTCTGGTCACTGTTGCCACGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS TCA 90 bp | TTCCAGGCTCAGCTACCTCCTGAGTTGCTAAACATACAAGATGTGTaGTCACGCTTCGCTCACAGCACTGATGGCTGCTCACCCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FQAQLPPELLNIQDV*SRFAHSTDGCSPFQ Trigger: CTGAAAGGGTGAGCAGCCATCAGTGCTGTGAGCGAAGCGTGATCACACATCTTGTATGTTTAGCAACTCAGGAGGTAGCTGAGCCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 90 bp | AATGGGCCTGATGAGGCTTGCTTTGTCTCCTCTGCACTCCCACACTaGTTTGTATCTGCTTCTCATTTCTCACGATGGGTCCAAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: NGPDEACFVSSALPH*FVSASHFSRWVQAL Trigger: CAAAGCTTGGACCCATCGTGAGAAATGAGAAGCAGATACAAAGCAGTGTGGGAGTGCAGAGGAGACAAAGCAAGCCTCATCAGGCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554169.1 ENST00000654925.1 ENST00000667310.1 ENST00000667668.1 |
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| CDS CCA 90 bp | AACAGTGACCAGAAACTATCAGAGGAAAATTGCACATGGAACAGCTaGCTCTCGAGCAGGCATGCCTCAGCTTCCTCTGGAGTATGCTTT | + |
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Preference number: 5 (lower is better) Translates to: NSDQKLSEENCTWNS*LSSRHASASSGVCF Trigger: AAAGCATACTCCAGAGGAAGCTGAGGCATGCCTGCTCGAGAGCCAGCTGTTCCATGTGCAATTTTCCTCTGATAGTTTCTGGTCACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS TCA 90 bp | TTCCAAAGAATGCTTCACGACAGACACCAACTCAGGAAGAGGCTGTaGGTAAGGAAGACTTCCCCACTAGGGAGGAAAATGAAGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: FQRMLHDRHQLRKRL*VRKTSPLGRKMKLS Trigger: GGAAAGCTTCATTTTCCTCCCTAGTGGGGAAGTCTTCCTTACTCACAGCCTCTTCCTGAGTTGGTGTCTGTCGTGAAGCATTCTTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663212.1 |
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| CDS TCA 90 bp | AATTGCTACATACCAGGAAAGTCACTTCCAGGCTCAGCTACCTCCTaGGTTGCTAAACATACAAGATGTGTGATCACGCTTCGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: NCYIPGKSLPGSATS*VAKHTRCVITLRSQ Trigger: CTGTGAGCGAAGCGTGATCACACATCTTGTATGTTTAGCAACTCAGGAGGTAGCTGAGCCTGGAAGTGACTTTCCTGGTATGTAGCAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 90 bp | TATCTGCTGGGGTGTGTGTGTGTGTGTGTGTGTAAACAGCAAGGCTaGAGCCTCCAGTTGTGTGATTATCTGTATATGCAGCAAAACACG | + |
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Preference number: 5 (lower is better) Translates to: YLLGCVCVCVCKQQG*SLQLCDYLYMQQNT Trigger: CGTGTTTTGCTGCATATACAGATAATCACACAACTGGAGGCTTCAGCCTTGCTGTTTACACACACACACACACACACACCCCAGCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 90 bp | GTAAACAGCAAGGCTGAAGCCTCCAGTTGTGTGATTATCTGTATATaGAGCAAAACACGCACACACCACACACATCAAAGTTCCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: VNSKAEASSCVIICI*SKTRTHHTHQSSQL Trigger: GAGCTGGGAACTTTGATGTGTGTGGTGTGTGCGTGTTTTGCTGCATATACAGATAATCACACAACTGGAGGCTTCAGCCTTGCTGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS CCA 90 bp | TATGCTTTACCCAGTTTCCACCGATGGCAGCATCTTACAAGACAATaGTACAGTATCACAGCTAGGAAACTGACAGACACCCACACGACA | + |
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Preference number: 5 (lower is better) Translates to: YALPSFHRWQHLTRQ*YSITARKLTDTHTT Trigger: TGTCGTGTGGGTGTCTGTCAGTTTCCTAGCTGTGATACTGTACCATTGTCTTGTAAGATGCTGCCATCGGTGGAAACTGGGTAAAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 90 bp | CGGATAGATAATGACATAGCCCAGTCATTATCACCGTGGCAACAGTaGCCAGAAACTATCAGAGGAAAATTGCACATGGAACAGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RIDNDIAQSLSPWQQ*PETIRGKLHMEQLA Trigger: AGCCAGCTGTTCCATGTGCAATTTTCCTCTGATAGTTTCTGGTCACTGTTGCCACGGTGATAATGACTGGGCTATGTCATTATCTATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS CCA 90 bp | GTCACCCTTCCCTTGTTGAAGGACATCCGGGTTGTTCCTGGTTTTTaGTTTTTCCTAGTGATGAACGCAGCTAGTGATGAAGGATGTTTA | + |
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Preference number: 5 (lower is better) Translates to: VTLPLLKDIRVVPGF*FFLVMNAASDEGCL Trigger: TAAACATCCTTCATCACTAGCTGCGTTCATCACTAGGAAAAACCAAAAACCAGGAACAACCCGGATGTCCTTCAACAAGGGAAGGGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS TCA 90 bp | GTTGCTAAACATACAAGATGTGTGATCACGCTTCGCTCACAGCACTaGTGGCTGCTCACCCTTTCAGCTGTATCATTTCGGTTAAAACAA | + |
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Preference number: 5 (lower is better) Translates to: VAKHTRCVITLRSQH*WLLTLSAVSFRLKQ Trigger: TTGTTTTAACCGAAATGATACAGCTGAAAGGGTGAGCAGCCATCAGTGCTGTGAGCGAAGCGTGATCACACATCTTGTATGTTTAGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 90 bp | AGGATGTTTAAGTGTCCAACAGTTGCCCAGGATTGGGTCTTGAGTTaGAGAAATCTAACAAAAACCAGTTACATGGTTCTTGCCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: RMFKCPTVAQDWVLS*RNLTKTSYMVLAIK Trigger: CTTGATGGCAAGAACCATGTAACTGGTTTTTGTTAGATTTCTGCAACTCAAGACCCAATCCTGGGCAACTGTTGGACACTTAAACATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000654925.1 ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 90 bp | AATTCACATGCAGTTGTAAGAAATCATACAGAGAGGTCCCCTATATaGTTTACCCAGTTTCCACCGATGGCAGCATCTTACAAGACAATG | + |
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Preference number: 5 (lower is better) Translates to: NSHAVVRNHTERSPI*FTQFPPMAASYKTM Trigger: CATTGTCTTGTAAGATGCTGCCATCGGTGGAAACTGGGTAAAGCATATAGGGGACCTCTCTGTATGATTTCTTACAACTGCATGTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663212.1 ENST00000667310.1 |
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| CDS GCA 90 bp | GGTCTTGAGTTGCAGAAATCTAACAAAAACCAGTTACATGGTTCTTaGCATCAAGAAATTTACAGTAACACAGGTAGGAACAACAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: GLELQKSNKNQLHGS*HQEIYSNTGRNNRL Trigger: TAACCTGTTGTTCCTACCTGTGTTACTGTAAATTTCTTGATGGCAAGAACCATGTAACTGGTTTTTGTTAGATTTCTGCAACTCAAGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS TCA 90 bp | CTGTATGTTCTTATCATATTCTACAAAAACACGGCAACTTCACTATaGTTTAGCAAAACACAGGCTTTGTACTCTTCCTTCTCAAGGATT | + |
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Preference number: 5 (lower is better) Translates to: LYVLIIFYKNTATSL*FSKTQALYSSFSRI Trigger: AATCCTTGAGAAGGAAGAGTACAAAGCCTGTGTTTTGCTAAATCATAGTGAAGTTGCCGTGTTTTTGTAGAATATGATAAGAACATACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667668.1 |
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| CDS GCA 72 bp | CGGTCAGGCTCCGGCTCCCCGCCACGACGAACTGCATaGGGCCGCGGCGCTCCGGAGGCGCCCGGGGACGCT | + |
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Preference number: 6 (lower is better) Translates to: RSGSGSPPRRTA*GRGAPEAPGDA Trigger: AGCGTCCCCGGGCGCCTCCGGAGCGCCGCGGCCGCATGCAGTTCGTCGTGGCGGGGAGCCGGAGCCTGACCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500370.2 ENST00000667310.1 |
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| CDS CAA 90 bp | CTTCCCGGCGTTCCGCGGAACGGGCGAGTCCCGCGCCTCTCCCAGTaGTCTCGGCGTAGTCCAGCTGGCCTCATTGGCTCACAGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPGVPRNGRVPRLSQ*SRRSPAGLIGSQEE Trigger: TTCCTCCTGTGAGCCAATGAGGCCAGCTGGACTACGCCGAGACAACTGGGAGAGGCGCGGGACTCGCCCGTTCCGCGGAACGCCGGGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000553559.1 ENST00000660378.1 |
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| CDS GCA 72 bp | CTGCACCACCCCCACCCATCCCATATGAGCAGCCGGTaGTTGGCTCTTCCGGGAAGCCCACACTTGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LHHPHPSHMSSR*LALPGSPHLGP Trigger: GGGCCCCAAGTGTGGGCTTCCCGGAAGAGCCAAGCACCGGCTGCTCATATGGGATGGGTGGGGGTGGTGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663212.1 |
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| CDS CAA 72 bp | GTTCCGCGGAACGGGCGAGTCCCGCGCCTCTCCCAGTaGTCTCGGCGTAGTCCAGCTGGCCTCATTGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: VPRNGRVPRLSQ*SRRSPAGLIGS Trigger: TGAGCCAATGAGGCCAGCTGGACTACGCCGAGACAACTGGGAGAGGCGCGGGACTCGCCCGTTCCGCGGAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000553559.1 ENST00000660378.1 |
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| CDS CCA 72 bp | TCACGATGGGTCCAAGCTTTGGGCACCAGGTCTCCCTaGACATTCCGCGCTGGCACTGCGCCTAGCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: SRWVQALGTRSP*TFRAGTAPSTQ Trigger: CTGGGTGCTAGGCGCAGTGCCAGCGCGGAATGTCCAGGGAGACCTGGTGCCCAAAGCTTGGACCCATCGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554169.1 ENST00000654925.1 ENST00000667310.1 ENST00000667668.1 |
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| CDS GCA 72 bp | CAAGAGACCAACACGACAAGCGCGCGCCCACCGCATTaGCATGGCAATTCAACCGCCGCTGACACCGGAACC | + |
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Preference number: 6 (lower is better) Translates to: QETNTTSARPPH*HGNSTAADTGT Trigger: GGTTCCGGTGTCAGCGGCGGTTGAATTGCCATGGCAATGCGGTGGGCGCGCGCTTGTCGTGTTGGTCTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500370.2 |
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| CDS CAA 90 bp | TCCCGCGCCTCTCCCAGTTGTCTCGGCGTAGTCCAGCTGGCCTCATaGGCTCACAGGAGGAAAGTCGTCTTCCCTCTTGTTTTGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRASPSCLGVVQLAS*AHRRKVVFPLVLPL Trigger: GAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCAATGAGGCCAGCTGGACTACGCCGAGACAACTGGGAGAGGCGCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000553559.1 ENST00000660378.1 |
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| CDS TCA 72 bp | CTCCCTGGATCAACATCTCCTGACTTGCTGTCTCTCTaGGCTCTGCATTTCCCAGTCGGCTGGGCAGAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPGSTSPDLLSL*ALHFPVGWAEA Trigger: CGCCTCTGCCCAGCCGACTGGGAAATGCAGAGCTCAGAGAGACAGCAAGTCAGGAGATGTTGATCCAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 72 bp | CATTCCGCGCTGGCACTGCGCCTAGCACCCAGCGGCTaGTCAGGAAACGTTTGTCGAACGAACGAATTCACT | + |
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Preference number: 6 (lower is better) Translates to: HSALALRLAPSG*SGNVCRTNEFT Trigger: AGTGAATTCGTTCGTTCGACAAACGTTTCCTGAGCAGCCGCTGGGTGCTAGGCGCAGTGCCAGCGCGGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554169.1 ENST00000654925.1 ENST00000667310.1 ENST00000667668.1 |
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| CDS GCA 72 bp | TCCTCGTTGCTGAGCAGCAATCCACAGTGTGACGGATaGATCACGGGCTGGGTCACCCTTCCCTTGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSLLSSNPQCDG*ITGWVTLPLLK Trigger: CTTCAACAAGGGAAGGGTGACCCAGCCCGTGATGCATCCGTCACACTGTGGATTGCTGCTCAGCAACGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654925.1 ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS CCA 72 bp | AGCAGCAATCCACAGTGTGACGGATGCATCACGGGCTaGGTCACCCTTCCCTTGTTGAAGGACATCCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SSNPQCDGCITG*VTLPLLKDIRV Trigger: AACCCGGATGTCCTTCAACAAGGGAAGGGTGACCCAGCCCGTGATGCATCCGTCACACTGTGGATTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654925.1 ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS CAA 90 bp | TCCAGCTGGCCTCATTGGCTCACAGGAGGAAAGTCGTCTTCCCTCTaGTTTTGCCTCTCGTTGCCCTGCAAGCGTGACCCTGATGGACAT | + |
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Preference number: 6 (lower is better) Translates to: SSWPHWLTGGKSSSL*FCLSLPCKRDPDGH Trigger: ATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCAATGAGGCCAGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS GCA 72 bp | TGGCTCACAGGAGGAAAGTCGTCTTCCCTCTTGTTTTaGCTCTCGTTGCCCTGCAAGCGTGACCCTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: WLTGGKSSSLLF*LSLPCKRDPDG Trigger: TCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS CCA 72 bp | TATCTGCTTCTCATTTCTCACGATGGGTCCAAGCTTTaGGCACCAGGTCTCCCTGGACATTCCGCGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: YLLLISHDGSKL*APGLPGHSALA Trigger: TGCCAGCGCGGAATGTCCAGGGAGACCTGGTGCCCAAAGCTTGGACCCATCGTGAGAAATGAGAAGCAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554169.1 ENST00000654925.1 ENST00000667310.1 ENST00000667668.1 |
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| CDS CAA 72 bp | CCTCATTGGCTCACAGGAGGAAAGTCGTCTTCCCTCTaGTTTTGCCTCTCGTTGCCCTGCAAGCGTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: PHWLTGGKSSSL*FCLSLPCKRDP Trigger: AGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCAATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000553559.1 ENST00000660378.1 |
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| CDS CAA 72 bp | TCTCCCAGTTGTCTCGGCGTAGTCCAGCTGGCCTCATaGGCTCACAGGAGGAAAGTCGTCTTCCCTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SPSCLGVVQLAS*AHRRKVVFPLV Trigger: AACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCAATGAGGCCAGCTGGACTACGCCGAGACAACTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000553559.1 ENST00000660378.1 |
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| CDS CAA 72 bp | GGAGGAAAGTCGTCTTCCCTCTTGTTTTGCCTCTCGTaGCCCTGCAAGCGTGACCCTGATGGACATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GGKSSSLLFCLS*PCKRDPDGHPV Trigger: GACTGGATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS CAA 72 bp | TGTGACGGATGCATCACGGGCTGGGTCACCCTTCCCTaGTTGAAGGACATCCGGGTTGTTCCTGGTTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: CDGCITGWVTLP*LKDIRVVPGFW Trigger: CCAAAAACCAGGAACAACCCGGATGTCCTTCAACAAGGGAAGGGTGACCCAGCCCGTGATGCATCCGTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000654925.1 ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 72 bp | AAGTCGTCTTCCCTCTTGTTTTGCCTCTCGTTGCCCTaGAAGCGTGACCCTGATGGACATCCAGTCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: KSSSLLFCLSLP*KRDPDGHPVSP Trigger: TGGAGAGACTGGATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS GCA 72 bp | GAGGAAAGTCGTCTTCCCTCTTGTTTTGCCTCTCGTTaGCCTGCAAGCGTGACCCTGATGGACATCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: EESRLPSCFASR*PASVTLMDIQS Trigger: AGACTGGATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS GCA 72 bp | GCAAGTCTGGTGTGCTCGAGGGTACCACCAACCCTGTaGGGCTCCAAGACTACAGATTATGTAGCAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASLVCSRVPPTL*GSKTTDYVASP Trigger: TGGACTTGCTACATAATCTGTAGTCTTGGAGCCGCACAGGGTTGGTGGTACCCTCGAGCACACCAGACTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS CAA 90 bp | TGGCTCACAGGAGGAAAGTCGTCTTCCCTCTTGTTTTGCCTCTCGTaGCCCTGCAAGCGTGACCCTGATGGACATCCAGTCTCTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: WLTGGKSSSLLFCLS*PCKRDPDGHPVSPI Trigger: AATTGGAGAGACTGGATGTCCATCAGGGTCACGCTTGCAGGGCAACGAGAGGCAAAACAAGAGGGAAGACGACTTTCCTCCTGTGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553559.1 ENST00000660378.1 |
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| CDS CAA 72 bp | ACTGCGCCTAGCACCCAGCGGCTGCTCAGGAAACGTTaGTCGAACGAACGAATTCACTTCTTAGTTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: TAPSTQRLLRKR*SNERIHFLVPH Trigger: ATGGGGAACTAAGAAGTGAATTCGTTCGTTCGACAAACGTTTCCTGAGCAGCCGCTGGGTGCTAGGCGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554169.1 ENST00000654925.1 ENST00000667310.1 ENST00000667668.1 |
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| CDS GCA 72 bp | AGAGTGAAAAGCTCCCTGGATCAACATCTCCTGACTTaGTGTCTCTCTGAGCTCTGCATTTCCCAGTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: RVKSSLDQHLLT*CLSELCISQSA Trigger: AGCCGACTGGGAAATGCAGAGCTCAGAGAGACAGCAAGTCAGGAGATGTTGATCCAGGGAGCTTTTCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS CCA 72 bp | TCAGGCAGTCTGACCCCAGCACCCACTCCATCGCTGTaGATTCTGTCTCATAGCAATAGTGGTCATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: SGSLTPAPTPSL*ILSHSNSGHDS Trigger: TGAATCATGACCACTATTGCTATGAGACAGAATCCACAGCGATGGAGTGGGTGCTGGGGTCAGACTGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | ATGCTTCACGACAGACACCAACTCAGGAAGAGGCTGTaGGTAAGGAAGACTTCCCCACTAGGGAGGAAAATG | + |
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Preference number: 6 (lower is better) Translates to: MLHDRHQLRKRL*VRKTSPLGRKM Trigger: CATTTTCCTCCCTAGTGGGGAAGTCTTCCTTACTCACAGCCTCTTCCTGAGTTGGTGTCTGTCGTGAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663212.1 |
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| CDS TCA 72 bp | CATACAAGATGTGTGATCACGCTTCGCTCACAGCACTaGTGGCTGCTCACCCTTTCAGCTGTATCATTTCGG | + |
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Preference number: 6 (lower is better) Translates to: HTRCVITLRSQH*WLLTLSAVSFR Trigger: CCGAAATGATACAGCTGAAAGGGTGAGCAGCCATCAGTGCTGTGAGCGAAGCGTGATCACACATCTTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | CAGCTACCTCCTGAGTTGCTAAACATACAAGATGTGTaGTCACGCTTCGCTCACAGCACTGATGGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QLPPELLNIQDV*SRFAHSTDGCS Trigger: TGAGCAGCCATCAGTGCTGTGAGCGAAGCGTGATCACACATCTTGTATGTTTAGCAACTCAGGAGGTAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | GGGTGTGTGTGTGTGTGTGTGTGTAAACAGCAAGGCTaGAGCCTCCAGTTGTGTGATTATCTGTATATGCAG | + |
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Preference number: 6 (lower is better) Translates to: GCVCVCVCKQQG*SLQLCDYLYMQ Trigger: CTGCATATACAGATAATCACACAACTGGAGGCTTCAGCCTTGCTGTTTACACACACACACACACACACACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | CTCCTTGCTTTGACAAGTGTGGCTGTTCTGAACATGTaGTCATATTGGAATCGCTGTGTGATAGGCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLALTSVAVLNM*SYWNRCVIGRV Trigger: CACTCTGCCTATCACACAGCGATTCCAATATGATCACATGTTCAGAACAGCCACACTTGTCAAAGCAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663212.1 |
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| CDS TCA 72 bp | ATACCAGGAAAGTCACTTCCAGGCTCAGCTACCTCCTaGGTTGCTAAACATACAAGATGTGTGATCACGCTT | + |
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Preference number: 6 (lower is better) Translates to: IPGKSLPGSATS*VAKHTRCVITL Trigger: AAGCGTGATCACACATCTTGTATGTTTAGCAACTCAGGAGGTAGCTGAGCCTGGAAGTGACTTTCCTGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | TTACAAGACAATGGTACAGTATCACAGCTAGGAAACTaGCAGACACCCACACGACACAAAACGCTTCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LQDNGTVSQLGN*QTPTRHKTLPS Trigger: TGACGGAAGCGTTTTGTGTCGTGTGGGTGTCTGTCAGTTTCCTAGCTGTGATACTGTACCATTGTCTTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 72 bp | GCAGTTGTAAGAAATCATACAGAGAGGTCCCCTATATaGTTTACCCAGTTTCCACCGATGGCAGCATCTTAC | + |
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Preference number: 6 (lower is better) Translates to: AVVRNHTERSPI*FTQFPPMAASY Trigger: GTAAGATGCTGCCATCGGTGGAAACTGGGTAAAGCATATAGGGGACCTCTCTGTATGATTTCTTACAACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663212.1 ENST00000667310.1 |
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| CDS CCA 72 bp | CCCTTGTTGAAGGACATCCGGGTTGTTCCTGGTTTTTaGTTTTTCCTAGTGATGAACGCAGCTAGTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: PLLKDIRVVPGF*FFLVMNAASDE Trigger: TTCATCACTAGCTGCGTTCATCACTAGGAAAAACCAAAAACCAGGAACAACCCGGATGTCCTTCAACAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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| CDS CAA 90 bp | TGCCTGCCGAGCACCTGCCTGTCCAACCTGGGACTGGTGTCACCTTaGTTACTGATCCTTGTAGTCAAAAATAATTATCTCAAAACAATT | + |
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Preference number: 6 (lower is better) Translates to: CLPSTCLSNLGLVSP*LLILVVKNNYLKTI Trigger: AATTGTTTTGAGATAATTATTTTTGACTACAAGGATCAGTAACAAAGGTGACACCAGTCCCAGGTTGGACAGGCAGGTGCTCGGCAGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000658932.1 ENST00000667668.1 |
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| CDS TCA 72 bp | GGGCCAGTTCTTCCTGTTTTCCCTGTAAGAGCTGCATaGGATTCACATAAAGATGATGAAACGCACTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GPVLPVFPVRAA*DSHKDDETHCK Trigger: TTTGCAGTGCGTTTCATCATCTTTATGTGAATCTCATGCAGCTCTTACAGGGAAAACAGGAAGAACTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663212.1 |
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| CDS CAA 72 bp | AGCACCTGCCTGTCCAACCTGGGACTGGTGTCACCTTaGTTACTGATCCTTGTAGTCAAAAATAATTATCTC | + |
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Preference number: 6 (lower is better) Translates to: STCLSNLGLVSP*LLILVVKNNYL Trigger: GAGATAATTATTTTTGACTACAAGGATCAGTAACAAAGGTGACACCAGTCCCAGGTTGGACAGGCAGGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000500370.2 ENST00000658932.1 ENST00000667668.1 |
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| CDS CAA 72 bp | CATACCACGAGCCCGGCATGTTTGCTTGCTTTTGTTTaGAAATCTAAATGCAGCCTTGATAATGTCGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: HTTSPACLLAFV*KSKCSLDNVGA Trigger: AGCACCGACATTATCAAGGCTGCATTTAGATTTCAAAACAAAAGCAAGCAAACATGCCGGGCTCGTGGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS CAA 90 bp | AAACAACAGCATACCACGAGCCCGGCATGTTTGCTTGCTTTTGTTTaGAAATCTAAATGCAGCCTTGATAATGTCGGTGCTTCCATCGAT | + |
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Preference number: 6 (lower is better) Translates to: KQQHTTSPACLLAFV*KSKCSLDNVGASID Trigger: ATCGATGGAAGCACCGACATTATCAAGGCTGCATTTAGATTTCAAAACAAAAGCAAGCAAACATGCCGGGCTCGTGGTATGCTGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | TTTCCTGCCCTTGCTCATGCTATCAAAATAGCTCCTTaGAAGAGCACCAACATGCTTTTCCATATCCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: FPALAHAIKIAP*KSTNMLFHILS Trigger: GCTAAGGATATGGAAAAGCATGTTGGTGCTCTTTCAAGGAGCTATTTTGATAGCATGAGCAAGGGCAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667668.1 |
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| CDS GCA 72 bp | AAGTGTCCAACAGTTGCCCAGGATTGGGTCTTGAGTTaGAGAAATCTAACAAAAACCAGTTACATGGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KCPTVAQDWVLS*RNLTKTSYMVL Trigger: AAGAACCATGTAACTGGTTTTTGTTAGATTTCTGCAACTCAAGACCCAATCCTGGGCAACTGTTGGACACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000654925.1 ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS CAA 72 bp | TGCTATAGCTATGCTGAGCCTTCTGGAGGAAGGTTATaGATAAGTTCAAACACTGTTCAAACAAACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: CYSYAEPSGGRL*ISSNTVQTNQH Trigger: GTGCTGGTTTGTTTGAACAGTGTTTGAACTTATCAATAACCTTCCTCCAGAAGGCTCAGCATAGCTATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS TCA 72 bp | CAACACGAGTGTTTGGGGAGTCCTCTGGATAAGATGTaGGATATATCTCAAATGATGGACACAAATAATGAT | + |
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Preference number: 6 (lower is better) Translates to: QHECLGSPLDKM*DISQMMDTNND Trigger: ATCATTATTTGTGTCCATCATTTGAGATATATCTCACATCTTATCCAGAGGACTCCCCAAACACTCGTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000663212.1 ENST00000667310.1 ENST00000671157.1 |
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| CDS GCA 72 bp | TTGCAGAAATCTAACAAAAACCAGTTACATGGTTCTTaGCATCAAGAAATTTACAGTAACACAGGTAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LQKSNKNQLHGS*HQEIYSNTGRN Trigger: GTTCCTACCTGTGTTACTGTAAATTTCTTGATGGCAAGAACCATGTAACTGGTTTTTGTTAGATTTCTGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654925.1 |
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