RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNCAIP (Homo sapiens)

Ensembl gene IDs: ENSG00000064692

Ensembl transcript IDs: ENST00000261367.11, ENST00000261368.13, ENST00000395466.6, ENST00000395469.6, ENST00000506272.5, ENST00000508017.5, ENST00000508681.5, ENST00000509023.5, ENST00000509154.6, ENST00000509652.1, ENST00000510003.5, ENST00000510658.5, ENST00000512146.6, ENST00000512385.5, ENST00000513719.1, ENST00000514467.5, ENST00000514497.6, ENST00000515215.6, ENST00000542191.5

Found 1646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGTGGCAACTTTCTGGGCAGCAGTACTGTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: LVATFWAAVLSGLGC*GSPEGWFGGILPEP
Trigger: AGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCCCAGAAAGTTGCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp CCTTTAGCTGCTTGGTTAACTTCACCACTTGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCAGGTACCTGGAGCACAGGGTGTGCC +
Preference number: 1 (lower is better)
Translates to: PLAAWLTSPLERPAT*RSPPPPGTWSTGCA
Trigger: GGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGG +
Preference number: 1 (lower is better)
Translates to: RLSALSILSTLSTMG*GLGRSAFLTGVVLG
Trigger: CCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 90 bp TGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGA +
Preference number: 1 (lower is better)
Translates to: CAVHTLYAFYNGLRP*SVSLPHWGSLGVLR
Trigger: TCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 90 bp GCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGA +
Preference number: 1 (lower is better)
Translates to: AFYNGLRPWSVSLPH*GSLGVLRVVGVCVR
Trigger: TCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp GAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATGGGCTGTGGCCATCCAGGGATTTGG +
Preference number: 1 (lower is better)
Translates to: EYSLSLDTGILSLVR*SLRWEMGCGHPGIW
Trigger: CCAAATCCCTGGATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 90 bp TCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGGG +
Preference number: 1 (lower is better)
Translates to: SPEGWFGGILPEPGY*DSKSGSLLSEVGDG
Trigger: CCCATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp ATCAGAATCTTCATCTTTTGCTTTGGGTCTAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTT +
Preference number: 1 (lower is better)
Translates to: IRIFIFCFGSSPAGG*QASKNLNPLLDSWL
Trigger: AAGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp CAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTaGTGCCAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGC +
Preference number: 1 (lower is better)
Translates to: QGFGGLDAERKPASP*CQGVFLNHQVQAFC
Trigger: GCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp TCCATATTCAACCAAGGTCTGTATGCATCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACTGTTGCCATCCTGGTCTACTTCATC +
Preference number: 1 (lower is better)
Translates to: SIFNQGLYASKVAML*GYVNGTVAILVYFI
Trigger: GATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGACCTTGGTTGAATATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp AACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATG +
Preference number: 1 (lower is better)
Translates to: NLRPPDAKVCFLIIR*RLSALSILSTLSTM
Trigger: CATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTaGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGT +
Preference number: 1 (lower is better)
Translates to: DGELGEEGSDLPSDF*ASRNCWSWFCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp TCAGTTTTAAGTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAC +
Preference number: 1 (lower is better)
Translates to: SVLSSEMSYAWKMET*GHSWDLWQLSGQQY
Trigger: GTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAACTTAAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp ATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTG +
Preference number: 1 (lower is better)
Translates to: ICTTGSSKVTLSFKF*DVLRLEDGDLRALL
Trigger: CAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp TCCCTCTTCTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGCAGACA +
Preference number: 1 (lower is better)
Translates to: SLFSSGIFLEFLEEA*ASWNSKDSFSWVQT
Trigger: TGTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAGAAGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp CTGCCCTTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTT +
Preference number: 1 (lower is better)
Translates to: LPLSLSFSPFSSRLG*SICTTGSSKVTLSF
Trigger: AAAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAAGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp TTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTT +
Preference number: 1 (lower is better)
Translates to: LPSDFWASRNCWSWF*SVTRSTVCSFSCLV
Trigger: AACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 90 bp AGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGA +
Preference number: 1 (lower is better)
Translates to: RKPEHPGIPRTVFPG*RHFLRFPFPITGVR
Trigger: TCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 90 bp TCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCATAAACTaGAGAAGCCACAGAAGAATCTTTTCCGTAGCAAGAGAAAATTCT +
Preference number: 1 (lower is better)
Translates to: SWSTSSNEMPCSCIN*RSHRRIFSVARENS
Trigger: AGAATTTTCTCTTGCTACGGAAAAGATTCTTCTGTGGCTTCTTCAGTTTATGCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510658.5
3UTR-3UTR GCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: SRDLEALMLKGNLRPPDALEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: LSDLCISCLSLANFSSLFLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 90 bp TCGCTGCTCTCTGAGGTGGGAGATGGGCTGTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCC +
Preference number: 2 (lower is better)
Translates to: SLLSEVGDGLWPSRD*EALMLKGNLRPPDA
Trigger: GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 2 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: IQFKARLLHLHHRLLKGNHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGECRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: LSDLCISCLSLANFSSLFCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 2 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: PRFVTCGGPLESPALIFVSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIRHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGT +
Preference number: 2 (lower is better)
Translates to: MGCGLGRSAFLTGVV*GSSELLESVSDSLS
Trigger: ACTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 90 bp TCTGAGGTGGGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTaGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SEVGDGLWPSRDLEA*MLKGNLRPPDAKVC
Trigger: ACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCCCACCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: GCGLGRSAFLTGVVLGSSVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...TGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: VCFLIIRCRLSALSILSTLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGIERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: PRFVTCGGPLESPALIFVRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 2 (lower is better)
Translates to: FQLIPRFVTCGGPLESPAQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 90 bp CAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTG +
Preference number: 2 (lower is better)
Translates to: QYCQGWAAEGHQRAG*EEYSLSLDTGILSL
Trigger: CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 2 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTATCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: RLSALSILSTLSTMGCGLERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: FQLIPRFVTCGGPLESPALSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 2 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLATESSSASGDFHWDFLHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: RLSALSILSTLSTMGCGLKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 2 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGIVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 2 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 2 (lower is better)
Translates to: FQLIPRFVTCGGPLESPARLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 2 (lower is better)
Translates to: FVTCGGPLESPALIFVFFSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTATTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: PRFVTCGGPLESPALIFVVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 2 (lower is better)
Translates to: SRDLEALMLKGNLRPPDARERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 2 (lower is better)
Translates to: DLFRISRGSLSILEFQGQLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGISLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 2 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 2 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 2 (lower is better)
Translates to: SAFLTGVVLGSSELLESVRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 2 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 2 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCAATGGCCAGGCCTGCTaGAGTCAACTTCTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLNGQAC*SQLLSV
Trigger: AACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATT...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395466.6
3UTR-3UTR CCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: PRFVTCGGPLESPALIFVGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 2 (lower is better)
Translates to: FQLIPRFVTCGGPLESPAGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 2 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: FVTCGGPLESPALIFVFFRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 2 (lower is better)
Translates to: PRFVTCGGPLESPALIFVPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: SAFLTGVVLGSSELLESVVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 2 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSESPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 2 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 2 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 2 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 2 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: KVCFLIIRCRLSALSILSCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 2 (lower is better)
Translates to: LILSFASGAGRVSLGICLVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 2 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 2 (lower is better)
Translates to: LILSFASGAGRVSLGICLWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAAAATCCTTGAATCTCTaGCTGGCCATAGCAACCTGC +
Preference number: 2 (lower is better)
Translates to: EDGDLRALLGLVATFWAAKSLNL*LAIATC
Trigger: GCAGGTTGCTATGGCCAGTCAGAGATTCAAGGATTT...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510658.5
3UTR-3UTR GCA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: RLSALSILSTLSTMGCGLQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 2 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: DGDLRALLGLVATFWAAVKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: SDLCISCLSLANFSSLFSKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: FQLIPRFVTCGGPLESPALGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: PRFVTCGGPLESPALIFVRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: SAFLTGVVLGSSELLESVRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 2 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: DGLWPSRDLEALMLKGNLLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...CAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 2 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 2 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 90 bp GATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGC +
Preference number: 2 (lower is better)
Translates to: DSLLVEVRWRVLPLS*SFSPFSSRLGCSIC
Trigger: GCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 2 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTACAATACCACTGACCTaGTCTCATGAAGGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSTIPLT*SHEGAE
Trigger: CTCAGCTCCTTCATGAGATCAGGTCAGTGGTATTGT...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGCAGAAACAATACCACTaGCCTGATCTCATGAAGGAG +
Preference number: 2 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMQKQYH*PDLMKE
Trigger: CTCCTTCATGAGATCAGGTCAGTGGTATTGTTTCTG...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: ELSQICPHYGEREVQSTLKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: RFVTCGGPLESPALIFVFELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCTTGTTAGAAAGTAGGTaGCCCAAGCTTATAGGTGGC +
Preference number: 2 (lower is better)
Translates to: RCRLSALSILSTLSTMGCLLESR*PKLIGG
Trigger: GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAA...GCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508017.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 2 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 2 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIRRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGILHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAACACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: QTFSEISFPNNWRKILSEHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 2 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 2 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: LSALSILSTLSTMGCGLGRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...ACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: PSWTPGLLLATESSSASGGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 2 (lower is better)
Translates to: SAFLTGVVLGSSELLESVIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCACTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: EDGDLRALLGLVATFWAALLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: GFPLASVFLPSEVKGNVELLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 2 (lower is better)
Translates to: LILSFASGAGRVSLGICLGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: SDLCISCLSLANFSSLFSVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp GATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: DLFRISRGSLSILEFQGQCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...CTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: CPHYGEREVQSTLANTHACCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVACCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: RFVTCGGPLESPALIFVFVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: RFVTCGGPLESPALIFVFFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: LILSFASGAGRVSLGICLLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: RFVTCGGPLESPALIFVFKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 2 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSERIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 2 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 2 (lower is better)
Translates to: LRCPTLGRWRLEGTLGTCNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...ACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 2 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAATGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 2 (lower is better)
Translates to: QTFSEISFPNNWRKILSECRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 2 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 2 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSERNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: LRCPTLGRWRLEGTLGTCLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...ACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 2 (lower is better)
Translates to: KVCFLIIRCRLSALSILSPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 2 (lower is better)
Translates to: LPTLWGKGGSINISKYSCLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCCAGAAACAATACCACTaGCCTGATCTCATGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCQKQYH*PDLMKE
Trigger: CTCCTTCATGAGATCAGGTCAGTGGTATTGTTTCTG...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCGTACGCACTCCAACTaGCCATTCTTAATGGCCAGG +
Preference number: 2 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGRTHSN*PFLMAR
Trigger: CCTGGCCATTAAGAATGGTCAGTTGGAGTGCGTACG...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395466.6
3UTR-3UTR TCA 90 bp TTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGCCTTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: FNQHVRGKIDAAAVHFCLCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: MKELSQICPHYGEREVQSQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: RLSALSILSTLSTMGCGLVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCATACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: EDGDLRALLGLVATFWAAYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: LPTLWGKGGSINISKYSCLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 2 (lower is better)
Translates to: RFVTCGGPLESPALIFVFNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp AATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: NHQVQAFCAVHTLYAFYNGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...ATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: NHQVQAFCAVHTLYAFYNVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...ATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 2 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 2 (lower is better)
Translates to: IQFKARLLHLHHRLLKGNIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...GTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 2 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: LATESSSASGDFHWDFLEVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp ATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAAAGATTTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 2 (lower is better)
Translates to: MPCVVTQMLFNQHVRGKIWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...AATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp GTCATTATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VIMPCVVTQMLFNQHVRGELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...TCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: ELSQICPHYGEREVQSTLLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: ELSQICPHYGEREVQSTLQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: LSQICPHYGEREVQSTLAQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 2 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIRLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp GATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: DLFRISRGSLSILEFQGQSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 2 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGETVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 2 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 2 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAAAGATTCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 2 (lower is better)
Translates to: MPCVVTQMLFNQHVRGKIQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...AATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: SDSLSDLCISCLSLANFSIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 2 (lower is better)
Translates to: FVTCGGPLESPALIFVFFRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: LQWDLFRISRGSLSILEFVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 2 (lower is better)
Translates to: PHYGEREVQSTLANTHAIKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 2 (lower is better)
Translates to: CSSISMLEERLMQLLYISVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...AGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAACTTAATGGCCAGGCCTaGTGGAGTCAACTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: QWDLFRISRGSLSILEFQLNGQA*WSQLLS
Trigger: ACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAG...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395466.6
3UTR-3UTR GCA 90 bp AATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: NCWSWFCSVTRSTVCSFSLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp AATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: NCWSWFCSVTRSTVCSFSQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LFRISRGSLSILEFQGQFSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 2 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSETVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: RFVTCGGPLESPALIFVFIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCCCAAGCTTATAGGTaGCTGTTAACATTGTTTTAT +
Preference number: 2 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSPQAYR*LLTLFY
Trigger: ATAAAACAATGTTAACAGCCACCTATAAGCTTGGGG...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: GLLLATESSSASGDFHWDVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: QWDLFRISRGSLSILEFQVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 2 (lower is better)
Translates to: FVTCGGPLESPALIFVFFIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: LSALSILSTLSTMGCGLGSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...ACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 2 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 2 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: ELSQICPHYGEREVQSTLVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 2 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 2 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395466.6
3UTR-3UTR GCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGAAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: WDLFRISRGSLSILEFQGKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: MKELSQICPHYGEREVQSIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 2 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395466.6
3UTR-3UTR CCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 2 (lower is better)
Translates to: LFRISRGSLSILEFQGQFGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 2 (lower is better)
Translates to: KVCFLIIRCRLSALSILSVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 2 (lower is better)
Translates to: LLATESSSASGDFHWDFLRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 2 (lower is better)
Translates to: LQWDLFRISRGSLSILEFRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 2 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: LPTLWGKGGSINISKYSCVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGCCTTGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: FNQHVRGKIDAAAVHFCLVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...AAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 2 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PHYGEREVQSTLANTHAIELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 2 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 2 (lower is better)
Translates to: LFRISRGSLSILEFQGQFCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 2 (lower is better)
Translates to: FVTCGGPLESPALIFVFFTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 2 (lower is better)
Translates to: WDLFRISRGSLSILEFQGLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 2 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: ELSQICPHYGEREVQSTLKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 2 (lower is better)
Translates to: CPHYGEREVQSTLANTHAVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 2 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR TCA 90 bp TTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: FCSVTRSTVCSFSCLVNFKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...GAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR GCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 2 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: KVCFLIIRCRLSALSILSSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 2 (lower is better)
Translates to: LFRISRGSLSILEFQGQFVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR GCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 2 (lower is better)
Translates to: LFRISRGSLSILEFQGQFYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CCA 90 bp ATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAAAGATTTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: MPCVVTQMLFNQHVRGKISFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...AATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 3 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTC +
Preference number: 3 (lower is better)
Translates to: NGLRPWSVSLPH*GSLGVLRVVGV
Trigger: GACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTA +
Preference number: 3 (lower is better)
Translates to: ALSILSTLSTMG*GLGRSAFLTGV
Trigger: TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp TGCCGCTCGGCGCTCTGGGAGGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTTGCTCCATATTCAACC +
Preference number: 3 (lower is better)
Translates to: CRSALWEGFSPA*FCMVTFAPYST
Trigger: GGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: PRFVTCGGPLESPALIFVGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp GCTTGGTTAACTTCACCACTTGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCAGGTACCTGGAGCACA +
Preference number: 3 (lower is better)
Translates to: AWLTSPLERPAT*RSPPPPGTWST
Trigger: TGTGCTCCAGGTACCTGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAACCAAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp CTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATGGGCTGTGGCCATCCA +
Preference number: 3 (lower is better)
Translates to: LSLDTGILSLVR*SLRWEMGCGHP
Trigger: TGGATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp CATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: HTLYAFYNGLRP*SVSLPHWGSLG
Trigger: CCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: LSILSTLSTMGCGLGRSAEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 3 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: LSILSTLSTMGCGLGRSASSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 3 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 3 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGILTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp GGTAGCCATGCTGTGAGGCTACGTGAACGGCACTGTTaGCATCCTGGTCTACTTCATCCAACGAGATGCCCT +
Preference number: 3 (lower is better)
Translates to: GSHAVRLRERHC*HPGLLHPTRCP
Trigger: AGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: DGLWPSRDLEALMLKGNLEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 3 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 72 bp AACCAAGGTCTGTATGCATCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACTGTTGCCATCCTGGTC +
Preference number: 3 (lower is better)
Translates to: NQGLYASKVAML*GYVNGTVAILV
Trigger: GACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGACCTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp GGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTG +
Preference number: 3 (lower is better)
Translates to: GWFGGILPEPGY*DSKSGSLLSEV
Trigger: CACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: DGDLRALLGLVATFWAAVEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCATCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 3 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: SAFLTGVVLGSSELLESVNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGINLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGESSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 3 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 3 (lower is better)
Translates to: GFPLASVFLPSEVKGNVELGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: FLIIRCRLSALSILSTLSQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 3 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: DGDLRALLGLVATFWAAVNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 3 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIREEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 3 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 3 (lower is better)
Translates to: LILSFASGAGRVSLGICLWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 72 bp TCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTaGCATTTGCTCCATATTCAACCAAGGTCTGTATGC +
Preference number: 3 (lower is better)
Translates to: SGRAFPQRGSAW*HLLHIQPRSVC
Trigger: GCATACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 72 bp AGTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTGTGGCAACTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: SSEMSYAWKMET*GHSWDLWQLSG
Trigger: CCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 72 bp TCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTaGCATTTGCTCCATATTCAACCAAGGTCTGTTCTC +
Preference number: 3 (lower is better)
Translates to: SGRAFPQRGSAW*HLLHIQPRSVL
Trigger: GAGAACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
3UTR GCA 72 bp CCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCCATACTCTCTACGCTT +
Preference number: 3 (lower is better)
Translates to: PPDAKVCFLIIR*RLSALSILSTL
Trigger: AAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGT +
Preference number: 3 (lower is better)
Translates to: KAFSVDPPIRYL*RSAGESCPYLC
Trigger: ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp AGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: RCRLSALSILSTLSTMGCSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...GCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: LSDLCISCLSLANFSSLFSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: LILSFASGAGRVSLGICLNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 3 (lower is better)
Translates to: FLIIRCRLSALSILSTLSGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGA +
Preference number: 3 (lower is better)
Translates to: VRMVNWVKKGVT*PLISGLLEIVG
Trigger: TCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp GGGCTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTaGTCCATATTCAACCAAGGTCTGTTCTCATTTGCT +
Preference number: 3 (lower is better)
Translates to: GLFPSVVLHGDI*SIFNQGLFSFA
Trigger: AGCAAATGAGAACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
3UTR-3UTR CAA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGATCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: PSWTPGLLLATESSSASGSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 3 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: GLLLATESSSASGDFHWDSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGGTATCAGTGGCTaGGTGAATGTCCTGTGGGTA +
Preference number: 3 (lower is better)
Translates to: LSQICPHYGEREVQSTLANGISG*VNVLWV
Trigger: TACCCACAGGACATTCACCAAGCCACTGATACCATT...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR TCA 72 bp GGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTTCCTTTAGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GLLEIVGVGSAA*HVLLFVPLAAW
Trigger: CCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp TCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGCTCCTCAAAGGTAACT +
Preference number: 3 (lower is better)
Translates to: SLSFSPFSSRLG*SICTTGSSKVT
Trigger: AGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: PSDFWASRNCWS*FCSVTRSTVCS
Trigger: GGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR TCA 72 bp ACAGGCTCCTCAAAGGTAACTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAAGATGGAGACTTGAGG +
Preference number: 3 (lower is better)
Translates to: TGSSKVTLSFKF*DVLRLEDGDLR
Trigger: CCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAGAGTTACCTTTGAGGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR-3UTR CAA 90 bp TTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGCCTTTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 3 (lower is better)
Translates to: FNQHVRGKIDAAAVHFCLLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...AAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
3UTR-3UTR CAA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 3 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
3UTR GCA 72 bp GATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACTGTTTGTTCCTTTAGC +
Preference number: 3 (lower is better)
Translates to: DFWASRNCWSWF*SVTRSTVCSFS
Trigger: GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CCA 72 bp TCTCATGAAGGAGCTGAGCCAAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATCAACATTAGCAAATAC +
Preference number: 3 (lower is better)
Translates to: SHEGAEPNLPTL*GKGGSINISKY
Trigger: GTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
3UTR TCA 72 bp ACTTCATCCAACGAGATGCCCTGTTCTTGCATAAACTaGAGAAGCCACAGAAGAATCTTTTCCGTAGCAAGA +
Preference number: 3 (lower is better)
Translates to: TSSNEMPCSCIN*RSHRRIFSVAR
Trigger: TCTTGCTACGGAAAAGATTCTTCTGTGGCTTCTTCAGTTTATGCAAGAACAGGGCATCTCGTTGGATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510658.5
3UTR GCA 72 bp GAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTTCCTTTCCCAATAACT +
Preference number: 3 (lower is better)
Translates to: EHPGIPRTVFPG*RHFLRFPFPIT
Trigger: AGTTATTGGGAAAGGAAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR GCA 72 bp AAGCCACAGAAGAATCTTTTCCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGGAAAATCCTTAGAACA +
Preference number: 3 (lower is better)
Translates to: KPQKNLFLAIAT*VMNKAWKILRT
Trigger: TGTTCTAAGGATTTTCCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAGGAAAAGATTCTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395466.6
3UTR GCA 72 bp CTATTGATGTCATTATGCCGTGTGTCGTTACACAGATaGTCTTCAATCAGCATGTTAGAGGAAAGATTGATG +
Preference number: 3 (lower is better)
Translates to: LLMSLCRVSLHR*SSISMLEERLM
Trigger: CATCAATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCATAATGACATCAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGGAGGGAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: HQVPGAQGVPLPLGALGGSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...CCCTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGGAGGGAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HQVPGAQGVPLPLGALGGNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...CCCTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGGAGGGCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HQVPGAQGVPLPLGALGGLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...CCCTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDACRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPASGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: DGLWPSRDLEALMLKGNLCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...CAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCATCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GCGLGRSAFLTGVVLGSSSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...TGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGCAGTGTTGCGCTCATTaGGGCAGTCTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWQCCAH*GSLLPS
Trigger: TGATGGGAGAAGACTGCCTCAATGAGCGCAACACTG...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR TCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DSLSDLCISCLSLANFSSSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...GGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSELEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCATTCTCAGGACAATaGCAAGCTCCCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSSFSGQ*QAPRAA
Trigger: TGCTGCCCTGGGAGCTTGCCATTGTCCTGAGAATGA...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCATGGCTGATGTTTCAGTaGCGAAACCCGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: GCGLGRSAFLTGVVLGSSWLMFQ*RNPLHW
Trigger: CCAGTGAAGCGGGTTTCGCCACTGAAACATCAGCCA...TGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGGAGGGGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: HQVPGAQGVPLPLGALGGVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...CCCTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGGAGGGATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: HQVPGAQGVPLPLGALGGIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...CCCTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCACACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GCGLGRSAFLTGVVLGSSHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...TGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 72 bp CAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGCCTGGATACTGGGATT +
Preference number: 4 (lower is better)
Translates to: QGWAAEGHQRAG*EEYSLSLDTGI
Trigger: AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCTCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATAAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: ALGGLFPSVVLHGDICSISPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...TATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLALSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTACTCACTCCTTTCTTCTaGGCCTTGGGAGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVLTPFF*ALGAGP
Trigger: CGGACCAGCTCCCAAGGCCCAGAAGAAAGGAGTGAG...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLAVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCACAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAASPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIRSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCTCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: ALGGLFPSVVLHGDICSIERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGCCTGAGCTGGCAGTCTaGTGTTGTCTTCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWPELAV*CCLLNF
Trigger: AAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGG...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GFLRCPYSLRFLQWAAALRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...CAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 72 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLGRSAFLTGVV*GSSELLESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGICCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCGTTCACCCAGCGATGTaGTGGGCTCAGAGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPVHPAM*WAQSSY
Trigger: GTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAAC...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLASPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCACAGAAGAATCTTTTCCTGGCCATAGCAACCTGCGTAATGAATAAGGCTTGGCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQKNLFLAIATCVMNKAWHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAGGAAAAGATTCTTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAAERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGILSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLALSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCTCAGAGCTCTTACCTaGTGGGCCGCCCACTCCATC +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVELRALT*WAAHSI
Trigger: GATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GFLRCPYSLRFLQWAAALVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...CAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: DSLSDLCISCLSLANFSSNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...GGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SDLCISCLSLANFSSLFSNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDALRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCACAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAAQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDALVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTTGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLAWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: GFLRCPYSLRFLQWAAALKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...CAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: DSLSDLCISCLSLANFSSLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...GGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSALSILSTLSTMGCGLLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVELSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPASSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGAGCTTGTGCTGGTCGTaGATGACAGCTGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELSLCWS*MTADAF
Trigger: AAAAGCATCAGCTGTCATCCACGACCAGCACAAGCT...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGISTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSERCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGCAGACCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGSLSILEFQGQFFLGADRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...GTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGIWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPAWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCATCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPSGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPESGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAACAATACCACTGACCTaGTCTCATGAAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVTIPLT*SHEGAE
Trigger: CTCAGCTCCTTCATGAGATCAGGTCAGTGGTATTGT...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTACTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGISPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHALEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCATTCTCAGGACAATaGCAAGCTCCCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVSFSGQ*QAPRAA
Trigger: TGCTGCCCTGGGAGCTTGCCATTGTCCTGAGAATGA...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCGACTCACCCCCTTTCTaGTACTCAACCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDADSPPF*YSTTFW
Trigger: CCAGAAAGTGGTTGAGTACCAGAAAGGGGGTGAGTC...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACGTGGACAGCTTGTGCTaGTCGTGGATGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNVDSLC*SWMTAD
Trigger: ATCAGCTGTCATCCACGACCAGCACAAGCTGTCCAC...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCATGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LLATESSSASGDFHWDFLCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SDLCISCLSLANFSSLFSPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCTCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ALGGLFPSVVLHGDICSIWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...TATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCTGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPAWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
3UTR CAA 72 bp GTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTG +
Preference number: 4 (lower is better)
Translates to: VLRLEDGDLRAL*GLVATFWAAVL
Trigger: CAGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGTCGTGGATGACAGCTaGTGCTTTTCTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWVVDDS*CFSQVR
Trigger: CCTCACTTGAGAAAAGCATCAGCTGTCATCCACGAC...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTTCCGGTTTAGGCCACTaGCCTGCTCTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSSGLGH*PALLVW
Trigger: CCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGA...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LILSFASGAGRVSLGICLCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDAVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SDLCISCLSLANFSSLFSVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: DSLSDLCISCLSLANFSSVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...GGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAAVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATCAGGGCTGGGCTGCTaGGGGTCACCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHASGLGC*GSPEGW
Trigger: CCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGGGAACCAAAGCCCATTaGATCTTCCCTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: DGLWPSRDLEALMLKGNLGTKAH*IFPVCV
Trigger: GACACAGACAGGGAAGATGCAATGGGCTTTGGTTCC...CAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSILSTLSTMGCGLGRSALAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCATCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAASPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGESLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: DSLSDLCISCLSLANFSSQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...GGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: LRCPTLGRWRLEGTLGTCSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...ACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLASAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGCGAAACCCGCTTCACTaGGCGGAACTTACTGTACAC +
Preference number: 4 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKRNPLH*AELTVH
Trigger: GTGTACAGTAAGTTCCGCCCAGTGAAGCGGGTTTCG...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACAAGAGCTCTTACCTGGTaGGCCGCCCACTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTRALTW*AAHSIS
Trigger: GGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCT...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTTGGAAGGCCCTGAGCTaGCAGTCTGGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLWKALS*QSGVVF
Trigger: GAAGACAACACCAGACTGCCAGCTCAGGGCCTTCCA...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGAATGGCCAGGCCTGCTaGAGTCAACTTCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWNGQAC*SQLLSV
Trigger: AACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATT...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR CCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: DLFRISRGSLSILEFQGQCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...CTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCACCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAAPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FSPAWFCMVTFAPYSTKVRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...GACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCATAAACTGAAGCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AILVYFIQRDALFLHKLKRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...CTTCAGTTTATGCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTATGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCAGCCCGGCTGGAGGCTaGCAGGCTTCCAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGSPAGG*QASKNL
Trigger: CAGGTTCTTGGAAGCCTGTCAGCCTCCAGCCGGGCT...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: DGELGEEGSDLPSDFWASWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...AGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTATGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCATGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAACLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: RLSALSILSTLSTMGCGLCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: LSILSTLSTMGCGLGRSALFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCAGAAACAATACCACTaGCCTGATCTCATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPQKQYH*PDLMKE
Trigger: CTCCTTCATGAGATCAGGTCAGTGGTATTGTTTCTG...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LSILSTLSTMGCGLGRSADLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCATTTAGGCCACTGACCTaGTCTTCTGGTTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSFRPLT*SSGLDS
Trigger: AGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAA...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCACAGGGTGTGCCCCTaGCGCTCGGCGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIHRVCP*RSALWE
Trigger: CTCCCAGAGCGCCGAGCGGCAGGGGCACACCCTGTG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACTCAGAGCTCTTACCTaGTGGGCCGCCCACTCCATC +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLLRALT*WAAHSI
Trigger: GATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAAGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: RLSALSILSTLSTMGCGLVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: LILSFASGAGRVSLGICLLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CCACAGAAGAATCTTTTCCTGGCCATAGCAACCTGCGTAATGAATAAGGCTTGGCAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PQKNLFLAIATCVMNKAWQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAGGAAAAGATTCTTCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGACCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: GWRLTGFQEPESPLGLLARFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATCCGGTTTAGGCCACTaGCCTGCTCTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSSGLGH*PALLVW
Trigger: CCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: FLIIRCRLSALSILSTLSCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: FVTCGGPLESPALIFVFFKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIRWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: GFLRCPYSLRFLQWAAALLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...CAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGCAGAAACAATACCACTaGCCTGATCTCATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVQKQYH*PDLMKE
Trigger: CTCCTTCATGAGATCAGGTCAGTGGTATTGTTTCTG...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGCCATTCCAAGTCCCTTaGATCTTGAGTCTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVPFQVP*ILSLVC
Trigger: ACAGACTAGACTCAAGATTCAAGGGACTTGGAATGG...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTACTCCTTCTTGTCCTTaGCACTGCAGCCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LILSFASGAGRVSLGICLTPSCP*HCSPEE
Trigger: CTCTTCTGGGCTGCAGTGTCAAGGACAAGAAGGAGT...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGATCAAAGAAGTGAGGTaGTGTAGACACTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVIKEVR*CRHSAC
Trigger: ACACGCAGAGTGTCTACAGCACCTCACTTCTTTGAT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR GCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTCTTAATGGCCAGGCCTaGTGGAGTCAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSLNGQA*WSQLLS
Trigger: ACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAG...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR GCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SDLCISCLSLANFSSLFSQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATCTGGAGCACAGGGTGTaGCCCTGCCGCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENLEHRV*PCRSAL
Trigger: GAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAG...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLALSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTATTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RFVTCGGPLESPALIFVFLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTATGAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCMSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...CATACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PRFVTCGGPLESPALIFVSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTGTCAGTTTGGCCCTATaGGAACCAAAGCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: DGELGEEGSDLPSDFWASVSLAL*EPKPIA
Trigger: TGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGAC...AGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGCAACTACTGTCAGTTTaGCCCTATGGGAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKQLLSV*PYGNQS
Trigger: GCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTG...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCATTCTCAGGACAATaGCAAGCTCCCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGSFSGQ*QAPRAA
Trigger: TGCTGCCCTGGGAGCTTGCCATTGTCCTGAGAATGA...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTGTTCTCCAGAGTCTCTaGCTGATGTTTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLVLQSL*LMFQWR
Trigger: TCGCCACTGAAACATCAGCCAGAGACTCTGGAGAAC...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp AATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATCACCCAGCGATGTGCTaGGCTCAGAGCTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: NHQVQAFCAVHTLYAFYNHPAMC*AQSSYL
Trigger: CAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTG...ATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPANSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: DGELGEEGSDLPSDFWASGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...AGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATGCCGCTCGGCGCTCTaGGAGGGCTTTTCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRCRSAL*EGFSPA
Trigger: CGCTGGGGAAAAGCCCTCCCAGAGCGCCGAGCGGCA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGIRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGCAGACGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: RGSLSILEFQGQFFLGADVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...GTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDAIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: FSPAWFCMVTFAPYSTKVLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...GACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPERCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: FSPAWFCMVTFAPYSTKVLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...GACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCTCAACTTTTCGACCATaGGGATCACTAAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: SRDLEALMLKGNLRPPDASTFRP*GSLNVL
Trigger: CAAGACATTTAGTGATCCTCATGGTCGAAAAGTTGA...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCCGTACGCACTCCAACTaGCCATTCTTAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSRTHSN*PFLMAR
Trigger: CCTGGCCATTAAGAATGGTCAGTTGGAGTGCGTACG...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR TCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCAAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: GLLLATESSSASGDFHWDVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTATGGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCMVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...CATACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGCAGACGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: RGSLSILEFQGQFFLGADVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: VCFLIIRCRLSALSILSTRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVELFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGGAACCAAAGCCCATTaGATCTTCCCTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGGTKAH*IFPVCV
Trigger: GACACAGACAGGGAAGATGCAATGGGCTTTGGTTCC...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: WRLEGTLGTCGNFLGSSTDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...AGTACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGEDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCGTTTTCAGGCTCATATaGAGAGCCACATTTAACCAG +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPAVFRLI*RATFNQ
Trigger: CTGGTTAAATGTGGCTCTGCATATGAGCCTGAAAAC...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: PPIRYLWRSAGESCPYLCRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...ACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: IQFKARLLHLHHRLLKGNQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTTCTTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCSSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...AGAACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCTCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FVTCGGPLESPALIFVFFSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAGAGAGGCCAGCGACATaGAGGTCTCCACCACCACCA +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAERPAT*RSPPPP
Trigger: TGGTGGTGGTGGAGACCTGCATGTCGCTGGCCTCTC...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: QRAGLEEYSLSLDTGILSCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...ACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LSILSTLSTMGCGLGRSAYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTACTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RCRLSALSILSTLSTMGCRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...GCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VCFLIIRCRLSALSILSTSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPELSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGCTTTCTACAATGGGCTaGGGCCTTGGTCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLATESSSASGDFHWDFLLSTMG*GLGRSA
Trigger: GGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAG...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RLSALSILSTLSTMGCGLSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...AAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTATTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGTGTCGTTACACAGATaGTCTTCAATCAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPVSLHR*SSISML
Trigger: TAACATGCTGATTGAAGAGCATCTGTGTAACGACAC...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTTGTTAGAAAGTAGGTaGCCCAAGCTTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFLLESR*PKLIGG
Trigger: GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAA...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508017.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCGCTGAGGATTGTAGGTaGAAGGCCCTGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCAEDCR*KALSWQ
Trigger: CTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGC...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTCTTTCTTCTGGGCCTTaGGAGCTGGTCCGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTLSSGP*ELVRFR
Trigger: CCTAAACCGGACCAGCTCCCAAGGCCCAGAAGAAAG...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: FQLIPRFVTCGGPLESPAVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...GGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCATCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: KAFSVDPPIRYLWRSAGELLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLATESSSASGDFHWDFLVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: NHQVQAFCAVHTLYAFYNLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...ATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAACAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QWDLFRISRGSLSILEFQQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTACTGTCAGGGCTaGGCTGCTGAGGGTCACCAG +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGQYCQG*AAEGHQ
Trigger: CTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTG...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: RFVTCGGPLESPALIFVFPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGACCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCTGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACATGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVENLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTGTAGCCTGTTCCCTTaGCTCCTATTGTCAGATATG +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSCSLFP*LLLSDM
Trigger: CATATCTGACAATAGGAGTCAAGGGAACAGGCTACA...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTGCTAGAGCTAGAAACTaGTCTGTCTTCGTTTTGCGT +
Preference number: 4 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFARARN*SVFVLR
Trigger: ACGCAAAACGAAGACAGATCAGTTTCTAGCTCTAGC...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTTCCAGAGTCTCTGGCTaGTGTTTCAGTGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGSRVSG*CFSGET
Trigger: GGTTTCGCCACTGAAACATCAGCCAGAGACTCTGGA...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATGCCAGAAAGGCCATTaGTGGTTGTGCATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSCQKGH*WLCISP
Trigger: TGGGCTTATGCACAACCATCAATGGCCTTTCTGGCA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGCCAGAAAGGCCATTaGTGGTTGTGCATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSPAWFCMVTFAPYSTKVCQKGH*WLCISP
Trigger: TGGGCTTATGCACAACCATCAATGGCCTTTCTGGCA...GACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FPSVVLHGDICSIFNQGLVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGATTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTATGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CCACAGAAGAATCTTTTCCTGGCCATAGCAACCTGCGTAATGAATAAGGCTTGGTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PQKNLFLAIATCVMNKAWWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAGGAAAAGATTCTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: LRCPTLGRWRLEGTLGTCKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...ACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACATGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: LFPSVVLHGDICSIFNQGCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: GLLLATESSSASGDFHWDCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCATAAACTGAAGTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: AILVYFIQRDALFLHKLKCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...CTTCAGTTTATGCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: DSLSDLCISCLSLANFSSVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...GGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTCCTCTTCTCTCGTCTaGCCTTCCACCAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCSSSLV*PSTKPL
Trigger: CAGAGGCTTGGTGGAAGGGCAGACGAGAGAAGAGGA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp ATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: IQFKARLLHLHHRLLKGNDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...GTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAGTTCACCCAGCGATGTaGTGGGCTCAGAGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEVHPAM*WAQSSY
Trigger: GTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAAC...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTATCAGTGGACAGCTTGTaGTGGTCGTGGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLSVDSL*WSWMTA
Trigger: AGCTGTCATCCACGACCAGCACAAGCTGTCCACTGA...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTTCAGTGGACAGCTTGTaGTGGTCGTGGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTSVDSL*WSWMTA
Trigger: AGCTGTCATCCACGACCAGCACAAGCTGTCCACTGA...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp CTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: LFPSVVLHGDICSIFNQGRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTATCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLSPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCATCCCCAGCGTGGTTCTaGATGGTGACATTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLASPAWF*MVTFAP
Trigger: TGGAGCAAATGTCACCATGCAGAACCACGCTGGGGA...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FLIIRCRLSALSILSTLSSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGCAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FPSVVLHGDICSIFNQGLFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp GTCATTATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: VIMPCVVTQMLFNQHVRGSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...TCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCATAATGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: WPSRDLEALMLKGNLRPPFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...AGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCATTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGGCTGCTGTACATTTCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVAAVHF*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGAAATGTACAGCAGC...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAGAGCTGAGCCAAATCTaGCCACATTATGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSELSQI*PHYGER
Trigger: CCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTTTGTTAGAAAGTAGGTaGCCCAAGCTTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSLLESR*PKLIGG
Trigger: GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAA...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508017.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACTGCAGTTGTCCCAGTaGCCAATACAATGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLALQLSQ*PIQCLL
Trigger: GAGGAGGCATTGTATTGGCCACTGGGACAACTGCAG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCATCATTCTCAGGACAATaGCAAGCTCCCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLASFSGQ*QAPRAA
Trigger: TGCTGCCCTGGGAGCTTGCCATTGTCCTGAGAATGA...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACGAAACCCGCTTCACTaGGCGGAACTTACTGTACAC +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLRNPLH*AELTVH
Trigger: GTGTACAGTAAGTTCCGCCCAGTGAAGCGGGTTTCG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAGTTCTCCAGAGTCTCTaGCTGATGTTTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSVLQSL*LMFQWR
Trigger: TCGCCACTGAAACATCAGCCAGAGACTCTGGAGAAC...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTAGAGCTCTTACCTGGTaGGCCGCCCACTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTRALTW*AAHSIS
Trigger: GGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCT...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCTCAGAGCTCTTACCTaGTGGGCCGCCCACTCCATC +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTLRALT*WAAHSI
Trigger: GATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAG...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCACCCAGCGATGTGCTaGGCTCAGAGCTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGHPAMC*AQSSYL
Trigger: CAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS-3UTR CCA 90 bp CTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTTCTCGGTTTCTTCAGTaGACAGCTTGTGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LFPSVVLHGDICSIFNQGSRFLQ*TACAGR
Trigger: ACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGA...ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATGGAAGGCCCTGAGCTaGCAGTCTGGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEWKALS*QSGVVF
Trigger: GAAGACAACACCAGACTGCCAGCTCAGGGCCTTCCA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCGCTGAGGATTGTAGGTaGAAGGCCCTGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAAEDCR*KALSWQ
Trigger: CTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGC...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: DGELGEEGSDLPSDFWASNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...AGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: LSDLCISCLSLANFSSLFVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: LATESSSASGDFHWDFLEPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: VCFLIIRCRLSALSILSTGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CSSISMLEERLMQLLYISNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...AGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCACTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTATGCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCMPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...CATACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCACCACTGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: SVTRSTVCSFSCLVNFTTGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGACTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCCCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAARFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTTGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATCCAGAGTCTCTGGCTaGTGTTTCAGTGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPESRVSG*CFSGET
Trigger: GGTTTCGCCACTGAAACATCAGCCAGAGACTCTGGA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGTCGTGGATGACAGCTaGTGCTTTTCTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLVVDDS*CFSQVR
Trigger: CCTCACTTGAGAAAAGCATCAGCTGTCATCCACGAC...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATTCCGGTTTAGGCCACTaGCCTGCTCTTCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANSGLGH*PALLVW
Trigger: CCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGA...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACGTACGCACTCCAACTaGCCATTCTTAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPERTHSN*PFLMAR
Trigger: CCTGGCCATTAAGAATGGTCAGTTGGAGTGCGTACG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTCGTACGCACTCCAACTaGCCATTCTTAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSRTHSN*PFLMAR
Trigger: CCTGGCCATTAAGAATGGTCAGTTGGAGTGCGTACG...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR TCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTTGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANKVAML*GYVNGT
Trigger: AGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTT...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGTCAGACTCACTCAGTaGCCTCTGCATCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPVRLTQ*PLHQLS
Trigger: AGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGAC...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCATGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SDSLSDLCISCLSLANFSLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTTGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLCLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCATGTCTTCCTCCCAAGTaGGGTCAAGGGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLACLPPK*GQGQCR
Trigger: TCTACATTGCCCTTGACCTCACTTGGGAGGAAGACA...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SAFLTGVVLGSSELLESVKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...CACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: LRCPTLGRWRLEGTLGTCVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...ACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCACAATACCACTGACCTaGTCTCATGAAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSTIPLT*SHEGAE
Trigger: CTCAGCTCCTTCATGAGATCAGGTCAGTGGTATTGT...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACAACAATACCACTGACCTaGTCTCATGAAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTTIPLT*SHEGAE
Trigger: CTCAGCTCCTTCATGAGATCAGGTCAGTGGTATTGT...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACACCCCTGTTTGAGGTaGTCCAACAATATAGACAGC +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSHPCLR*SNNIDS
Trigger: GCTGTCTATATTGTTGGAGCACCTCAAACAGGGGTG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp TTCTGTTTCGCTCACCATCCAGCGTACGCACTCCAACTGACCATTCTTAATGGCGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: FCFAHHPAYALQLTILNGDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...GCCATTAAGAATGGTCAGTTGGAGTGCGTACGCTGGATGGTGAGCGAAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395466.6
CDS-3UTR GCA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: DGELGEEGSDLPSDFWASRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...AGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: GLLLATESSSASGDFHWDQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: EDGDLRALLGLVATFWAAVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGACTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLATESSSASGDFHWDFLSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHASSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAAGTTCAAGGCTAGGCTaGTCCATCTGCACCACAGGC +
Preference number: 4 (lower is better)
Translates to: QWDLFRISRGSLSILEFQSSRLG*SICTTG
Trigger: GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACT...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTGGCTGATGTTTCAGTaGCGAAACCCGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCWLMFQ*RNPLHW
Trigger: CCAGTGAAGCGGGTTTCGCCACTGAAACATCAGCCA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGTGGACAGCTTGTGCTaGTCGTGGATGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPVDSLC*SWMTAD
Trigger: ATCAGCTGTCATCCACGACCAGCACAAGCTGTCCAC...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTAATGGCCAGGCCTGCTaGAGTCAACTTCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLNGQAC*SQLLSV
Trigger: AACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: LQWDLFRISRGSLSILEFPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTGTCAGCCTTCCTCACTaGGGTAGTCTTGGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIVSLPH*GSLGVL
Trigger: GAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGAC...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAAATGGGCTGCGGCCTTaGTCGGTCAGCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRNGLRP*SVSLPH
Trigger: GTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGCGCTGCTCTCTGAGGTaGGAGATGGGCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLRCSLR*EMGCGH
Trigger: ATGGCCACAGCCCATCTCCCACCTCAGAGAGCAGCG...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCACCACTCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVTRSTVCSFSCLVNFTTHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLATESSSASGDFHWDFLHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHALVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCACCACTTGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SVTRSTVCSFSCLVNFTTWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTTTGGGCTCTAGTAACTaGATTTGGTCTCTGGTAATT +
Preference number: 4 (lower is better)
Translates to: LSALSILSTLSTMGCGLGLGSSN*IWSLVI
Trigger: AATTACCAGAGACCAAATCCAGTTACTAGAGCCCAA...ACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCTGTTCTCATTTGCTTaGGCTCTAGTAACTGGATTT +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLLFSFA*ALVTGF
Trigger: AAATCCAGTTACTAGAGCCCAAGCAAATGAGAACAG...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATGTGCTGGTCGTGGATaGCAGCTGATGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPECAGRG*QLMLFS
Trigger: TGAGAAAAGCATCAGCTGTCATCCACGACCAGCACA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGTGCTGGTCGTGGATaGCAGCTGATGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFCAGRG*QLMLFS
Trigger: TGAGAAAAGCATCAGCTGTCATCCACGACCAGCACA...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTGTTGCGCTCATTaGGGCAGTCTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGQCCAH*GSLLPS
Trigger: TGATGGGAGAAGACTGCCTCAATGAGCGCAACACTG...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACGTACGCACTCCAACTaGCCATTCTTAATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHARTHSN*PFLMAR
Trigger: CCTGGCCATTAAGAATGGTCAGTTGGAGTGCGTACG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATGCTGTGAGGCTACGTaGACGGCACTGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRCCEAT*TALLPS
Trigger: GGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGTTAACTTCACCACTTaGGAGGCCAGCGACATGCAG +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANVNFTT*EASDMQ
Trigger: CTGCATGTCGCTGGCCTCTCAAGTGGTGAAGTTAAC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAATGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: QWDLFRISRGSLSILEFQWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGATGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RFVTCGGPLESPALIFVFLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FPSVVLHGDICSIFNQGLLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCCTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: FVTCGGPLESPALIFVFFLFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTAAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DGDLRALLGLVATFWAAVKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: FPSVVLHGDICSIFNQGLVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTAAATCCTTGAATCTCTaGCTGGCCATAGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLKSLNL*LAIATC
Trigger: GCAGGTTGCTATGGCCAGTCAGAGATTCAAGGATTT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510658.5
CDS-3UTR GCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACAGTGGCCAATACAATaGCTCCTCTTCTCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEQWPIQ*LLFSRL
Trigger: CAGACGAGAGAAGAGGAGGCATTGTATTGGCCACTG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCGGAACCAAAGCCCATTaGATCTTCCCTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGGTKAH*IFPVCV
Trigger: GACACAGACAGGGAAGATGCAATGGGCTTTGGTTCC...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTATGGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCMDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...CATACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTATCAAAGAAGTGAGGTaGTGTAGACACTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LFPSVVLHGDICSIFNQGIKEVR*CRHSAC
Trigger: ACACGCAGAGTGTCTACAGCACCTCACTTCTTTGAT...ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR GCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCACTTAATGGCCAGGCCTaGTGGAGTCAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPLNGQA*WSQLLS
Trigger: ACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAG...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTCTTAATGGCCAGGCCTaGTGGAGTCAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSLNGQA*WSQLLS
Trigger: ACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAG...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR GCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLIIRCRLSALSILSTLSLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: NCWSWFCSVTRSTVCSFSRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: FCSVTRSTVCSFSCLVNFRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCACCACTCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: SVTRSTVCSFSCLVNFTTRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: LQWDLFRISRGSLSILEFRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGCAGACGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: RGSLSILEFQGQFFLGADVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...GTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHALSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGACTGTTTATTTGTTGCTaGGCCAACCTGATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PSWTPGLLLATESSSASGLFICC*ANLIRN
Trigger: ATTCCTGATCAGGTTGGCGCAGCAACAAATAAACAG...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAAGGCTCCTAGGCATCTaGAATTTGCCTCTACTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPERLLGI*NLPLLP
Trigger: GGGAAGTAGAGGCAAATTCCAGATGCCTAGGAGCCT...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGTCAGTTTGGCCCTATaGGAACCAAAGCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGVSLAL*EPKPIA
Trigger: TGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGAC...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCGAAACCCGCTTCACTaGGCGGAACTTACTGTACAC +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANRNPLH*AELTVH
Trigger: GTGTACAGTAAGTTCCGCCCAGTGAAGCGGGTTTCG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCACCCAGCGATGTGCTaGGCTCAGAGCTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIHPAMC*AQSSYL
Trigger: CAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAGTGGACAGCTTGTGCTaGTCGTGGATGACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAVDSLC*SWMTAD
Trigger: ATCAGCTGTCATCCACGACCAGCACAAGCTGTCCAC...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTAGGAAGTCTTTACTCTaGTTTTCAGGCTCATATGCA +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSRKSLL*FSGSYA
Trigger: TGCATATGAGCCTGAAAACCAGAGTAAAGACTTCCT...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCCTGAGCTGGCAGTCTaGTGTTGTCTTCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLPELAV*CCLLNF
Trigger: AAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGCTGAGGATTGTAGGTaGAAGGCCCTGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRAEDCR*KALSWQ
Trigger: CTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGC...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTCTTTCTTCTGGGCCTTaGGAGCTGGTCCGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEILSSGP*ELVRFR
Trigger: CCTAAACCGGACCAGCTCCCAAGGCCCAGAAGAAAG...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCTCACTCCTTTCTTCTaGGCCTTGGGAGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAILTPFF*ALGAGP
Trigger: CGGACCAGCTCCCAAGGCCCAGAAGAAAGGAGTGAG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp GTCATTATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: VIMPCVVTQMLFNQHVRGGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...TCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCATAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACAAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGTGAGGATGGTGAACTaGGTGAAGAAGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGVRMVN*VKKGVT
Trigger: AGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEISTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCCACTGGGACTTTCTaGAGGCAGGTGAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQSTGTF*RQVRMV
Trigger: CACCATCCTCACCTGCCTCCAGAAAGTCCCAGTGGA...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: LILSFASGAGRVSLGICLIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCCCCTCTTGGACTCCTaGCTTGCTTTTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANPLLDS*LAFGYR
Trigger: TCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGGG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: GFLRCPYSLRFLQWAAALSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...CAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GCTCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: ALGGLFPSVVLHGDICSISFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...TATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTCTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEILVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACCGATTCGTTACTTGTaGAGGTCCGCTGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQPIRYL*RSAGES
Trigger: GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: LILSFASGAGRVSLGICLRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCATGTAGCCTGTTCCCTTaGCTCCTATTGTCAGATATG +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLACSLFP*LLLSDM
Trigger: CATATCTGACAATAGGAGTCAAGGGAACAGGCTACA...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCTGTAGCCTGTTCCCTTaGCTCCTATTGTCAGATATG +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFCSLFP*LLLSDM
Trigger: CATATCTGACAATAGGAGTCAAGGGAACAGGCTACA...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAGCTAGAGCTAGAAACTaGTCTGTCTTCGTTTTGCGT +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAARARN*SVFVLR
Trigger: ACGCAAAACGAAGACAGATCAGTTTCTAGCTCTAGC...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCCAGAGTCTCTGGCTaGTGTTTCAGTGGCGAAACC +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQSRVSG*CFSGET
Trigger: GGTTTCGCCACTGAAACATCAGCCAGAGACTCTGGA...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTTTTAACCAGAGGAGGTaGGATCTCGGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLFNQRR*DLGFFS
Trigger: ACTGAAGAAACCGAGATCTCACCTCCTCTGGTTAAA...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LFRISRGSLSILEFQGQFRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGCCTTTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: FNQHVRGKIDAAAVHFCLWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...AAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTATGCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCMLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...CATACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: FLIIRCRLSALSILSTLSKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACAGAAACAATACCACTaGCCTGATCTCATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAQKQYH*PDLMKE
Trigger: CTCCTTCATGAGATCAGGTCAGTGGTATTGTTTCTG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGTTCACCCAGCGATGTaGTGGGCTCAGAGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIVHPAM*WAQSSY
Trigger: GTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAAC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTCAGTGGACAGCTTGTaGTGGTCGTGGATGACAGCT +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEISVDSL*WSWMTA
Trigger: AGCTGTCATCCACGACCAGCACAAGCTGTCCACTGA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTATTTAGGCCACTGACCTaGTCTTCTGGTTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLFRPLT*SSGLDS
Trigger: AGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAA...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTATCAAAGAAGTGAGGTaGTGTAGACACTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLIKEVR*CRHSAC
Trigger: ACACGCAGAGTGTCTACAGCACCTCACTTCTTTGAT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: FCSVTRSTVCSFSCLVNFQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...GAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCACTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCATGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCCWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATGTTGGAGTTGGTTCTaGAGCGTGACACGTTCTACT +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPECWSWF*SVTRST
Trigger: AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FCSVTRSTVCSFSCLVNFKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...GAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LATESSSASGDFHWDFLELGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEILSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTGCTGCTGTACATTTCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LILSFASGAGRVSLGICLAAVHF*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGAAATGTACAGCAGC...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTTGATGTCATTATGCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLLMSLC*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGCATAATGACATCAA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACTGGGTGCCAGGATATaGTATAAACATCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLALGARI*YKHQQE
Trigger: TTCCTGCTGATGTTTATACCATATCCTGGCACCCAG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp GTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGGTCAGTTTGGCCCTATaGGAACCAAAGCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: VSLHRCSSISMLEERLMQVSLAL*EPKPIA
Trigger: TGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGAC...CTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACAACTACTGTCAGTTTaGCCCTATGGGAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEQLLSV*PYGNQS
Trigger: GCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCACCACTCAACTACTGTCAGTTTaGCCCTATGGGAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVTRSTVCSFSCLVNFTTQLLSV*PYGNQS
Trigger: GCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTG...AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTGGCTGATGTTTCAGTaGCGAAACCCGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIWLMFQ*RNPLHW
Trigger: CCAGTGAAGCGGGTTTCGCCACTGAAACATCAGCCA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATGGAAGGCCCTGAGCTaGCAGTCTGGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRWKALS*QSGVVF
Trigger: GAAGACAACACCAGACTGCCAGCTCAGGGCCTTCCA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACTTTCTTCTGGGCCTTaGGAGCTGGTCCGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRLSSGP*ELVRFR
Trigger: CCTAAACCGGACCAGCTCCCAAGGCCCAGAAGAAAG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATCTCACTCCTTTCTTCTaGGCCTTGGGAGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENLTPFF*ALGAGP
Trigger: CGGACCAGCTCCCAAGGCCCAGAAGAAAGGAGTGAG...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGAAATGGCCAGGCCTGCTaGAGTCAACTTCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGNGQAC*SQLLSV
Trigger: AACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATT...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR CCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCGGCTTTTCCCCAGCGTaGTTCTGCATGGTGACATTT +
Preference number: 4 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAGFSPA*FCMVTF
Trigger: AAATGTCACCATGCAGAACCACGCTGGGGAAAAGCC...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACAGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLARNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: FLIIRCRLSALSILSTLSLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTCACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LFRISRGSLSILEFQGQFHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRLVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTGGCAGGGTTTCCCTTaGCATCTGTCTTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIWQGFP*HLSSSQ
Trigger: TTGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCAAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCTGTAGCCTGTTCCCTTaGCTCCTATTGTCAGATATG +
Preference number: 4 (lower is better)
Translates to: LQWDLFRISRGSLSILEFCSLFP*LLLSDM
Trigger: CATATCTGACAATAGGAGTCAAGGGAACAGGCTACA...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCGCTAGAGCTAGAAACTaGTCTGTCTTCGTTTTGCGT +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCARARN*SVFVLR
Trigger: ACGCAAAACGAAGACAGATCAGTTTCTAGCTCTAGC...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAGTCGTGGATGACAGCTaGTGCTTTTCTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQVVDDS*CFSQVR
Trigger: CCTCACTTGAGAAAAGCATCAGCTGTCATCCACGAC...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTGTGCTGGTCGTGGATaGCAGCTGATGCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEICAGRG*QLMLFS
Trigger: TGAGAAAAGCATCAGCTGTCATCCACGACCAGCACA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTTTTAACCAGAGGAGGTaGGATCTCGGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSFNQRR*DLGFFS
Trigger: ACTGAAGAAACCGAGATCTCACCTCCTCTGGTTAAA...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR TCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATCAACTTTTCGACCATaGGGATCACTAAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSSTFRP*GSLNVL
Trigger: CAAGACATTTAGTGATCCTCATGGTCGAAAAGTTGA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCAGTGTTGCGCTCATTaGGGCAGTCTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIQCCAH*GSLLPS
Trigger: TGATGGGAGAAGACTGCCTCAATGAGCGCAACACTG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAGTTGGTTCTGCAGCGTaGCACGTTCTACTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAVGSAA*HVLLFV
Trigger: AACAAACAGTAGAACGTGTCACGCTGCAGAACCAAC...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTAGGCTTCCAAGAACCTaGATCCCCTCTTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIRLPRT*IPSWTP
Trigger: AGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCT...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATGGAGGAATACTCCCTaGGCCTGGATACTGGGATTC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRWRNTP*AWILGF
Trigger: GAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTCTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp TTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPSVVLHGDICSIFNQGLKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAAGGAATCTTTCAATTTaGACTTGCAGGATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSRNLSI*TCRMVV
Trigger: CACTACCATCCTGCAAGTGCAAATTGAAAGATTCCT...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTGGAACCAAAGCCCATTaGATCTTCCCTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTGTKAH*IFPVCV
Trigger: GACACAGACAGGGAAGATGCAATGGGCTTTGGTTCC...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR GCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: LATESSSASGDFHWDFLELHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp GACTTGCCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: DLPSDFWASRNCWSWFCSVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...GCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGGCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LFPSVVLHGDICSIFNQGYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: NCWSWFCSVTRSTVCSFSLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGTCACTCAGTGACCTCTaGATCAGCTGTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLSLSDL*ISCLSL
Trigger: CAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGA...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACAGGTGCAGGCTTTCTaGGCTGTCCATACTCTCTAC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRQVQAF*AVHTLY
Trigger: GTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NCWSWFCSVTRSTVCSFSSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAGTCAGTTTGGCCCTATaGGAACCAAAGCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQVSLAL*EPKPIA
Trigger: TGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGAC...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAAGCTTGTGCTGGTCGTaGATGACAGCTGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHASLCWS*MTADAF
Trigger: AAAAGCATCAGCTGTCATCCACGACCAGCACAAGCT...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTTCTCGGTTTCTTCAGTaGACAGCTTGTGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTSRFLQ*TACAGR
Trigger: ACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGA...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LQWDLFRISRGSLSILEFNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATCTACGCTTTCTACAATaGGCTGCGGCCTTGGTCGGT +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENLRFLQ*AAALVG
Trigger: ACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAG...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTCCTGAGCCTGGATACTaGGATTCTAAGTCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: CSSISMLEERLMQLLYISPEPGY*DSKSGS
Trigger: CGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGG...AGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACACTCTTGGGACTTGTaGCAACTTTCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRHSWDL*QLSGQQ
Trigger: CTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACCTACGCTTGGAAGATaGAGACTTGAGGGCACTCTT +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQPTLGR*RLEGTL
Trigger: AAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLLLATESSSASGDFHWDIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATCTGCCCACATTATaGGGAAAGGGAGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCNLPTL*GKGGSI
Trigger: GATTGAACCTCCCTTTCCCCATAATGTGGGCAGATT...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGTGCCCCCAAGCTTATAGGTaGCTGTTAACATTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: KGNLRPPDAKVCFLIIRCPQAYR*LLTLFY
Trigger: ATAAAACAATGTTAACAGCCACCTATAAGCTTGGGG...GCACCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACATTCTCTCCTACTGTaGTGGATTCTGATACAATCC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEHSLLL*WILIQS
Trigger: GGATTGTATCAGAATCCATCACAGTAGGAGAGAATG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATGCCAGAAAGGCCATTaGTGGTTGTGCATAAGCCCA +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRCQKGH*WLCISP
Trigger: TGGGCTTATGCACAACCATCAATGGCCTTTCTGGCA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCTTTAACCAGAGGAGGTaGGATCTCGGTTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGFNQRR*DLGFFS
Trigger: ACTGAAGAAACCGAGATCTCACCTCCTCTGGTTAAA...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS-3UTR TCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCATCAACTTTTCGACCATaGGGATCACTAAATGTCTTG +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLASTFRP*GSLNVL
Trigger: CAAGACATTTAGTGATCCTCATGGTCGAAAAGTTGA...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATCAGTGTTGCGCTCATTaGGGCAGTCTTCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENQCCAH*GSLLPS
Trigger: TGATGGGAGAAGACTGCCTCAATGAGCGCAACACTG...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR TCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATTGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACTGTTCTTCTGCTGGTaGGGCATTGTTTTCATGGTT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHALFFCW*GIVFMV
Trigger: AACCATGAAAACAATGCCTCACCAGCAGAAGAACAG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAACAATACCACTGACCTaGTCTCATGAAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQTIPLT*SHEGAE
Trigger: CTCAGCTCCTTCATGAGATCAGGTCAGTGGTATTGT...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCAGAAACAATACCACTaGCCTGATCTCATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGQKQYH*PDLMKE
Trigger: CTCCTTCATGAGATCAGGTCAGTGGTATTGTTTCTG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATTTAGGCCACTGACCTaGTCTTCTGGTTTGGATTCT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAFRPLT*SSGLDS
Trigger: AGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCATCAAAGAAGTGAGGTaGTGTAGACACTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGIKEVR*CRHSAC
Trigger: ACACGCAGAGTGTCTACAGCACCTCACTTCTTTGAT...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCTTAATGGCCAGGCCTaGTGGAGTCAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAILNGQA*WSQLLS
Trigger: ACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp TTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: FCSVTRSTVCSFSCLVNFRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...GAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: LQWDLFRISRGSLSILEFRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCTGGCCATAGCAACCTaGGTAATGAATAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTLAIAT*VMNKAW
Trigger: CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAG...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: CSSISMLEERLMQLLYISQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...AGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPELHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGTTCTACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: PAWFCMVTFAPYSTKVCSTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...AGAACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR GCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATCTAAGTCTGGTTCGCTaGTCTCTGAGGTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENLSLVR*SLRWEM
Trigger: CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAG...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCTCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHASAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTGCTGCTGTACATTTCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLAAVHF*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGAAATGTACAGCAGC...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261367.11
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCTTGTTAGAAAGTAGGTaGCCCAAGCTTATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGLLESR*PKLIGG
Trigger: GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAA...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACATTATAGGAAGTCTTaGGCCACTGCCCATATTTAT +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLAHYRKS*ATAHIY
Trigger: ATAAATATGGGCAGTGGCCCAAGACTTCCTATAATG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACAACTACTGTCAGTTTaGCCCTATGGGAACCAAAGC +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQQLLSV*PYGNQS
Trigger: GCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CCA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCACTTTCTGGTTCTTTTaGTCATCACTTTCATTGTTC +
Preference number: 4 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGTFWFF*SSLSLF
Trigger: GAACAATGAAAGTGATGACCAAAAGAACCAGAAAGT...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGACTCACCCCCTTTCTaGTACTCAACCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRDSPPF*YSTTFW
Trigger: CCAGAAAGTGGTTGAGTACCAGAAAGGGGGTGAGTC...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAAAAATGGTGCCATGTTaGATGATGAGCTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPKMVPC*MMSSQN
Trigger: GTTCTGAGAGCTCATCATCCAACATGGCACCATTTT...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCAAAATGGTGCCATGTTaGATGATGAGCTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFKMVPC*MMSSQN
Trigger: GTTCTGAGAGCTCATCATCCAACATGGCACCATTTT...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTCTCGGTTTCTTCAGTaGACAGCTTGTGCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAISRFLQ*TACAGR
Trigger: ACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACCTGAGCTGGCAGTCTaGTGTTGTCTTCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQPELAV*CCLLNF
Trigger: AAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAAATGGCCAGGCCTGCTaGAGTCAACTTCTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRNGQAC*SQLLSV
Trigger: AACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGAAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: WDLFRISRGSLSILEFQGRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCTCCTGGCTTGCTTTTaGCTACAGAATCATCATCTG +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGLLACF*LQNHHL
Trigger: CAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CCA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGGTCCTCAGAGTTGTTaGAGTCTGTGTCAGACTCAC +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIGPQSC*SLCQTH
Trigger: GTGAGTCTGACACAGACTCCAACAACTCTGAGGACC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAAGGGTCACCAGAGGGCTaGTTTGGAGGAATACTCCCT +
Preference number: 4 (lower is better)
Translates to: QTFSEISFPNNWRKILSEGSPEG*FGGILP
Trigger: AGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAACTTGTGGAGGTCCGCTaGAGAGTCCTGCCCTTATCT +
Preference number: 4 (lower is better)
Translates to: QTFSEISFPNNWRKILSELVEVR*RVLPLS
Trigger: AGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAG...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCCCCAAGCTTATAGGTaGCTGTTAACATTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LFPSVVLHGDICSIFNQGPQAYR*LLTLFY
Trigger: ATAAAACAATGTTAACAGCCACCTATAAGCTTGGGG...ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGTGGTTTTCCAATCCTaGCTACATTCCCCAACATTA +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANVVFQS*LHSPTL
Trigger: TAATGTTGGGGAATGTAGTCAGGATTGGAAAACCAC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR TCA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACTTCCTTGCACATTTTaGGTACGGTCAAATACTTAT +
Preference number: 4 (lower is better)
Translates to: LSQICPHYGEREVQSTLALPCTF*VRSNTY
Trigger: ATAAGTATTTGACCGTACTCAAAATGTGCAAGGAAG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACTTCCTTGCACATTTTaGGTACGGTCAAATACTTAT +
Preference number: 4 (lower is better)
Translates to: ELSQICPHYGEREVQSTLLPCTF*VRSNTY
Trigger: ATAAGTATTTGACCGTACTCAAAATGTGCAAGGAAG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTTTCTAGAGGAAGCCTaGGCATCCTGGAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIFLEEA*ASWNSK
Trigger: CTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAATGGAAGATGGAGACTTaGGGGCACTCTTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QTFSEISFPNNWRKILSEWKMET*GHSWDL
Trigger: CAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCA...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR TCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTACAATACCACTGACCTaGTCTCATGAAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAITIPLT*SHEGAE
Trigger: CTCAGCTCCTTCATGAGATCAGGTCAGTGGTATTGT...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATTCTCAATTATAATGTaGAGAAATCCCCGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSFSIIM*RNPRGF
Trigger: AAAACCACGGGGATTTCTGCACATTATAATTGAGAA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: QWDLFRISRGSLSILEFQRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATCGTGAACGGCACTGTTaGCATCCTGGTCTACTTCAT +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENRERHC*HPGLLH
Trigger: ATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACG...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGCAACCAAGGTCTGTATaGATCCAAGGTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLQPRSV*IQGSHA
Trigger: AGCATGGCTACCTTGGATGCATACAGACCTTGGTTG...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHALHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAACTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: QWDLFRISRGSLSILEFQLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAAAGAAGGGAGTGACTTaGCCTCTGATTTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRKKGVT*PLISGL
Trigger: AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCTTGGACTCCTGGCTTaGTTTTGGCTACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTLGLLA*FWLQNH
Trigger: ATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAG...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQRIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTTCTTAATCATCAGGTaGAGGCTTTCTGCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIFLIIR*RLSALS
Trigger: GGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCCGCTGGAGAGTCCTaGCCTTATCTTTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQSAGES*PYLCLF
Trigger: AAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGA...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: KVCFLIIRCRLSALSILSFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CCACAGAAGAATCTTTTCCTGGCCATAGCAACCTGCGTAATGAATAAGGCTTGGTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: PQKNLFLAIATCVMNKAWFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...CCAAGCCTTATTCATTACGCAGGTTGCTATGGCCAGGAAAAGATTCTTCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCCATATTTATTTCTGTaGGTTGGATGGCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTPYLFL*VGWPHL
Trigger: AAGGTGGGGCCATCCAACCCACAGAAATAAATATGG...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATAACATGCATCGAAGCTaGGGACCAAATGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANNMHRS*GPNGSL
Trigger: TAAAGATCCATTTGGTCCCCAGCTTCGATGCATGTT...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATGTTCTCCAGAGTCTCTaGCTGATGTTTCAGTGGCGA +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENVLQSL*LMFQWR
Trigger: TCGCCACTGAAACATCAGCCAGAGACTCTGGAGAAC...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATGACTCACCCCCTTTCTaGTACTCAACCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENDSPPF*YSTTFW
Trigger: CCAGAAAGTGGTTGAGTACCAGAAAGGGGGTGAGTC...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAAGGAAGTCTTTACTCTaGTTTTCAGGCTCATATGCA +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPRKSLL*FSGSYA
Trigger: TGCATATGAGCCTGAAAACCAGAGTAAAGACTTCCT...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAAACTCAGTTCTGCAATaGCTTCTGTTTCGCTCACCA +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQNSVLQ*LLFRSP
Trigger: TGGTGAGCGAAACAGAAGCCATTGCAGAACTGAGTT...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCGTTCCTTTAGCTGCTTaGTTAACTTCACCACTTGAG +
Preference number: 4 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAVPLAA*LTSPLE
Trigger: CTCAAGTGGTGAAGTTAACCAAGCAGCTAAAGGAAC...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: MKELSQICPHYGEREVQSSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAAAAGGCCTTTTCAGTTaGTCCCCCGATTCGTTACTT +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRKGLFS*SPDSLL
Trigger: AAGTAACGAATCGGGGGATCAACTGAAAAGGCCTTT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATAGAATGTTTTATTTaGCGCCTATGGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEIECFI*RLWENC
Trigger: GCAGTTTTCCCATAGGCGTCAAATAAAACATTCTAT...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCTTTCAATTTGCACTTaGAGGATGGTAGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTLSICT*RMVVRF
Trigger: GAACCTCACTACCATCCTGCAAGTGCAAATTGAAAG...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIDLSSF*VSHLRH
Trigger: GTGCCGAAGATGTGATACGCAAAACGAAGACAGATC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTGTTTTCAGGCTCATATaGAGAGCCACATTTAACCAG +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTVFRLI*RATFNQ
Trigger: CTGGTTAAATGTGGCTCTGCATATGAGCCTGAAAAC...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGTTTGTTCCTTTAGCTaGTTGGTTAACTTCACCACT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANVCSFS*LVNFTT
Trigger: AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAAC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp GTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGGTGTCGTTACACAGATaGTCTTCAATCAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: VSLHRCSSISMLEERLMQVSLHR*SSISML
Trigger: TAACATGCTGATTGAAGAGCATCTGTGTAACGACAC...CTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGCGGATAATAACTCATaGCATCACAACAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANADNNS*HHNRNL
Trigger: AAGATTCCTGTTGTGATGCCATGAGTTATTATCCGC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAACAATCCAGACTCTTTaGATACTAGCGTGTTCACTA +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHATIQTL*ILACSL
Trigger: TAGTGAACACGCTAGTATCCAAAGAGTCTGGATTGT...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAAAAATGGTGCCATGTTaGATGATGAGCTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQKMVPC*MMSSQN
Trigger: GTTCTGAGAGCTCATCATCCAACATGGCACCATTTT...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAACCCCAAGCTTATAGGTaGCTGTTAACATTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEPQAYR*LLTLFY
Trigger: ATAAAACAATGTTAACAGCCACCTATAAGCTTGGGG...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTCCGTGATGAACTATTaGTTTACAGACTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAISVMNY*FTDSVP
Trigger: GGGAACAGAGTCTGTAAATCAATAGTTCATCACGGA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGACTCAGTTTTAAGTTCTaGGATGTCCTACGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRLSFKF*DVLRLE
Trigger: TTCCAAGCGTAGGACATCTCAGAACTTAAAACTGAG...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGTCCTGTGGGTAGGGTaGATCAATCTACTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRVLWVG*INLLLK
Trigger: TTTTAAGAGTAGATTGATTCACCCTACCCACAGGAC...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATTTCCCCAACATTAACTaGTTCTTTACAGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANFPNIN*FFTGKS
Trigger: ACTCTTACCTGTAAAGAAGCAGTTAATGTTGGGGAA...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATTTGTCTGGTTTCAATaGTTGTCTCTTTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRFVWFQ*LSLSGC
Trigger: GCACCCTGAAAGAGACAAGCATTGAAACCAGACAAA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGTTTTCAGGCTCATATaGAGAGCCACATTTAACCAG +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIVFRLI*RATFNQ
Trigger: CTGGTTAAATGTGGCTCTGCATATGAGCCTGAAAAC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR GCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTAGAACAACTCAGTTCTaGAATGGCTTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIRTTQF*NGFCFA
Trigger: AGCGAAACAGAAGCCATTGCAGAACTGAGTTGTTCT...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGCTGCATGGTGACATTTaGTCCATATTCAACCAAGGT +
Preference number: 4 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLLHGDI*SIFNQG
Trigger: ACCTTGGTTGAATATGGAGCAAATGTCACCATGCAG...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp GATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: DLFRISRGSLSILEFQGQTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAATTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: QWDLFRISRGSLSILEFQFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTGTGTCGTTACACAGATaGTCTTCAATCAGCATGTTA +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTVSLHR*SSISML
Trigger: TAACATGCTGATTGAAGAGCATCTGTGTAACGACAC...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261367.11
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTTGATGTCATTATGCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCLMSLC*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGCATAATGACATCAA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
CDS-3UTR GCA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCTTGATGTCATTATGCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LQWDLFRISRGSLSILEFLMSLC*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGCATAATGACATCAA...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATAGAAATTGTTGGAGTTaGTTCTGCAGCGTGACACGT +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENRNCWS*FCSVTR
Trigger: ACGTGTCACGCTGCAGAACCAACTCCAACAATTTCT...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: LPTLWGKGGSINISKYSCSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGATCCTTTCCCAATAACTaGCGTAAGATTTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGSFPNN*RKILSE
Trigger: TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGA...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAAGGTTTTCAGCTGGTTaGCTGCCTGGTAGTTATTAT +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRRFSAG*LPGSYY
Trigger: ATAATAACTACCAGGCAGCCAACCAGCTGAAAACCT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACCCCAAGCTTATAGGTaGCTGTTAACATTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: CPHYGEREVQSTLANTHAPQAYR*LLTLFY
Trigger: ATAAAACAATGTTAACAGCCACCTATAAGCTTGGGG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCCCCAAGCTTATAGGTaGCTGTTAACATTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: NQNITDLLESRCPKLIGGPQAYR*LLTLFY
Trigger: ATAAAACAATGTTAACAGCCACCTATAAGCTTGGGG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CCA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCTCTAGTAACTGGATTTaGTCTCTGGTAATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTSSNWI*SLVIGF
Trigger: AAAACCAATTACCAGAGACCAAATCCAGTTACTAGA...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395469.6
3UTR CAA 72 bp CACAGATGCTCTTCAATCAGCATGTTAGAGGAAAGATaGATGCAGCTGCTGTACATTTCTGCCTTATTCTTT +
Preference number: 4 (lower is better)
Translates to: HRCSSISMLEER*MQLLYISALFF
Trigger: AAAGAATAAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCATCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR TCA 90 bp TGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTAAATTTAAGGCATCCTaGTATTCTGTTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CSSISMLEERLMQLLYISKFKAS*YSVLLL
Trigger: CAGCAGAAGAACAGAATATCAGGATGCCTTAAATTT...AGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATACAGAATCATCATCTaGATCTGGAGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRYRIII*IWRFPL
Trigger: CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAAAGAATCTTCATCTTTTaGTTTGGGTCTAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QTFSEISFPNNWRKILSERIFIF*FGSSPA
Trigger: AGCCGGGCTAGACCCAAAGCAAAAGATGAAGATTCT...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTTTTCAGCTGGTTGGCTaGCTGGTAGTTATTATTATT +
Preference number: 4 (lower is better)
Translates to: QICPHYGEREVQSTLANTFQLVG*LVVIII
Trigger: AATAATAATAACTACCAGGCAGCCAACCAGCTGAAA...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTTTCTGGTTCTTTTaGTCATCACTTTCATTGTTC +
Preference number: 4 (lower is better)
Translates to: SQICPHYGEREVQSTLANTFWFF*SSLSLF
Trigger: GAACAATGAAAGTGATGACCAAAAGAACCAGAAAGT...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTAGGAAGTCTTTACTCTaGTTTTCAGGCTCATATGCA +
Preference number: 4 (lower is better)
Translates to: PHYGEREVQSTLANTHAIRKSLL*FSGSYA
Trigger: TGCATATGAGCCTGAAAACCAGAGTAAAGACTTCCT...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CCA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATATCATCATCTGCATCTaGAGATTTCCACTGGGACTT +
Preference number: 4 (lower is better)
Translates to: EDSPEISNNFQRASVRENIIICI*RFPLGL
Trigger: AAGTCCCAGTGGAAATCTCCAGATGCAGATGATGAT...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAATAAAATGGTATCAGTaGCTTGGTGAATGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRIKWYQ*LGECPV
Trigger: CACAGGACATTCACCAAGCCACTGATACCATTTTAT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR GCA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGACAGTTTTTCCTGGGTaGAGACATTTTCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLTVFPG*RHFLRF
Trigger: AAATCTCAGAAAATGTCTGCACCCAGGAAAAACTGT...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR GCA 90 bp AGATGTGAATTGAAAATCCTTGAATCTCTGACTGGCCATAGCAACCTGCGTAATTTGATGTCATTATGCTaGCTTATTCTTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RCELKILESLTGHSNLRNLMSLC*LILSFA
Trigger: AGCAAAGGAAAGAATAAGGCAGCATAATGACATCAA...ATTACGCAGGTTGCTATGGCCAGTCAGAGATTCAAGGATTTTCAATTCACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510658.5
CDS-3UTR CCA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAACTTTCTGGTTCTTTTaGTCATCACTTTCATTGTTC +
Preference number: 4 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQTFWFF*SSLSLF
Trigger: GAACAATGAAAGTGATGACCAAAAGAACCAGAAAGT...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS TCA 90 bp GGGGCGCCCGGCGCGCCGGCGGCTCAGGAGCGCGAAGGGACTGACTaGCCGACCGACGGACCGCAGCGGCAGGAGCAGAACAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GAPGAPAAQEREGTD*PTDGPQRQEQNSLS
Trigger: GCTGAGGCTGTTCTGCTCCTGCCGCTGCGGTCCGTCGGTCGGTCAGTCAGTCCCTTCGCGCTCCTGAGCCGCCGGCGCGCCGGGCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512385.5
ENST00000514497.6
ENST00000542191.5
CDS TCA 90 bp TCCCGGGGCGCCCGGCGCGCCGGCGGCTCAGGAGCGCGAAGGGACTaGCTGACCGACCGACGGACCGCAGCGGCAGGAGCAGAACAGCCT +
Preference number: 5 (lower is better)
Translates to: SRGARRAGGSGARRD*LTDRRTAAAGAEQP
Trigger: AGGCTGTTCTGCTCCTGCCGCTGCGGTCCGTCGGTCGGTCAGTCAGTCCCTTCGCGCTCCTGAGCCGCCGGCGCGCCGGGCGCCCCGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS TCA 90 bp CTCCGGGGCGCCCGGCGCGCCGGCGGCTCAGGAGCGCGAAGGGACTaGCTGACCGACCGACGGACCGCAGCGGCAGGAGCAGAACAGCCT +
Preference number: 5 (lower is better)
Translates to: LRGARRAGGSGARRD*LTDRRTAAAGAEQP
Trigger: AGGCTGTTCTGCTCCTGCCGCTGCGGTCCGTCGGTCGGTCAGTCAGTCCCTTCGCGCTCCTGAGCCGCCGGCGCGCCGGGCGCCCCGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514497.6
CDS CCA 90 bp CGCAGCGGCAGGAGCAGAACAGCCTCAGCCGAAGTAGGCGGGCGGTaGAGGCGCTGCCGCGGCCCCGCTACGTCACAATGCGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RSGRSRTASAEVGGR*RRCRGPATSQCGPA
Trigger: GGCCGGGCCGCATTGTGACGTAGCGGGGCCGCGGCAGCGCCTCCACCGCCCGCCTACTTCGGCTGAGGCTGTTCTGCTCCTGCCGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS CCA 90 bp CTCCAGTTCACCCAGCGATGTGCTGGGCTCAGAGCTCTTACCTGGTaGGCCGCCCACTCCATCTCCAGGGCCAAGCTCCTGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LQFTQRCAGLRALTW*AAHSISRAKLLRLG
Trigger: CCCCAGCCTCAGGAGCTTGGCCCTGGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAACTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS-3UTR CAA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS CCA 90 bp GTGCTCCAGTTCACCCAGCGATGTGCTGGGCTCAGAGCTCTTACCTaGTGGGCCGCCCACTCCATCTCCAGGGCCAAGCTCCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLQFTQRCAGLRALT*WAAHSISRAKLLRL
Trigger: CAGCCTCAGGAGCTTGGCCCTGGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAACTGGAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS-3UTR CAA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGGCTGGCAGTCTGGTGTaGTCTTCTCAACTTTTCGAC +
Preference number: 5 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALAGSLV*SSQLFD
Trigger: GTCGAAAAGTTGAGAAGACAACACCAGACTGCCAGC...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp CACCACCACCAGGTACCTGGAGCACAGGGTGTGCCCCTGCCGCTCGGCGCTCTGACCTGCTCTTCTGGTTaGGATTCTGCTGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: HHHQVPGAQGVPLPLGALTCSSG*DSAAED
Trigger: ATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGT...CAGAGCGCCGAGCGGCAGGGGCACACCCTGTGCTCCAGGTACCTGGTGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CCA 90 bp CATCCATGTCGAGGTCGTAGTGCTCCAGTTCACCCAGCGATGTGCTaGGCTCAGAGCTCTTACCTGGTGGGCCGCCCACTCCATCTCCAG +
Preference number: 5 (lower is better)
Translates to: HPCRGRSAPVHPAMC*AQSSYLVGRPLHLQ
Trigger: CTGGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAACTGGAGCACTACGACCTCGACATGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 90 bp TCTCATCCATGTCGAGGTCGTAGTGCTCCAGTTCACCCAGCGATGTaGTGGGCTCAGAGCTCTTACCTGGTGGGCCGCCCACTCCATCTC +
Preference number: 5 (lower is better)
Translates to: SHPCRGRSAPVHPAM*WAQSSYLVGRPLHL
Trigger: GAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAACTGGAGCACTACGACCTCGACATGGATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS-3UTR CAA 90 bp GGCAGCAGTACTGTCAGGGCTGGGCTGCTGAGGGTCACCAGAGGGCTGGTTTGGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GSSTVRAGLLRVTRGLVWSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CCAAACCAGCCCTCTGGTGACCCTCAGCAGCCCAGCCCTGACAGTACTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: MGCGLGRSAFLTGVVLGSDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...GGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GCGLGRSAFLTGVVLGSSNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCACCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTCTTCAGTGGACAGCTaGTGCTGGTCGTGGATGACA +
Preference number: 5 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELSSVDS*CWSWMT
Trigger: TGTCATCCACGACCAGCACAAGCTGTCCACTGAAGA...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCACAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: EDGDLRALLGLVATFWAAQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCACACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS GCA 90 bp TGCAGTTGTCCCAGTGGCCAATACAATGCCTCCTCTTCTCTCGTCTaGCCTTCCACCAAGCCTCTGGCACTCTCAGGCACTCTTTTCCGG +
Preference number: 5 (lower is better)
Translates to: CSCPSGQYNASSSLV*PSTKPLALSGTLFR
Trigger: CCGGAAAAGAGTGCCTGAGAGTGCCAGAGGCTTGGTGGAAGGGCAGACGAGAGAAGAGGAGGCATTGTATTGGCCACTGGGACAACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp GGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: GSPEGWFGGILPEPGYWDLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...ATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCCTTTTCAGTTGATCCCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AFSVDPPIRYLWRSAGESHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...GGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGGATCAACTGAAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AFCAVHTLYAFYNGLRPWHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...CCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: EPGYWDSKSGSLLSEVGDPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...ATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: ALSILSTLSTMGCGLGRSGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...TGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTCCCCAGCGTGGTTCTGCATGGTGACATTTGCTCCATATTCAACCAAGGTCTGCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: FPSVVLHGDICSIFNQGLQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...CAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: RCRLSALSILSTLSTMGCHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...GCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCTGGAGGCTGACAGGCTTCCAAGAACCTGAATCCCCTCTTGGACTCCTGGCTTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: GWRLTGFQEPESPLGLLALEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...AGCCAGGAGTCCAAGAGGGGATTCAGGTTCTTGGAAGCCTGTCAGCCTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGCTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGCTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: GFPLASVFLPSEVKGNVELAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCCTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SDLCISCLSLANFSSLFSLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS TCA 90 bp CACTCCTTTCTTCTGGGCCTTGGGAGCTGGTCCGGTTTAGGCCACTaGCCTGCTCTTCTGGTTTGGATTCTGCTGCTGAGGATTGTAGGT +
Preference number: 5 (lower is better)
Translates to: HSFLLGLGSWSGLGH*PALLVWILLLRIVG
Trigger: ACCTACAATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAGCTCCCAAGGCCCAGAAGAAAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 90 bp ACAGCAGGGCCTGTGTACCTGTATGCATCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACTGTTGCCATCCTGGTCTACTTCATC +
Preference number: 5 (lower is better)
Translates to: TAGPVYLYASKVAML*GYVNGTVAILVYFI
Trigger: GATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGGTACACAGGCCCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS GCA 90 bp CTTTCTTCTGGGCCTTGGGAGCTGGTCCGGTTTAGGCCACTGACCTaGTCTTCTGGTTTGGATTCTGCTGCTGAGGATTGTAGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: LSSGPWELVRFRPLT*SSGLDSAAEDCRWK
Trigger: CTTCCACCTACAATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAGCTCCCAAGGCCCAGAAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 90 bp TCCTTATCTCAGCTTTTCCGAGCCGCGGAACTGCCCATCCCTGCCTaGGATAAGATCCCGGGTGACAGCAAGAATAAGAACCACATGAGG +
Preference number: 5 (lower is better)
Translates to: SLSQLFRAAELPIPA*DKIPGDSKNKNHMR
Trigger: CCTCATGTGGTTCTTATTCTTGCTGTCACCCGGGATCTTATCGCAGGCAGGGATGGGCAGTTCCGCGGCTCGGAAAAGCTGAGATAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS GCA 90 bp TATTACTTCGCCCCTCCTTATCTCAGCTTTTCCGAGCCGCGGAACTaGCCATCCCTGCCTGCGATAAGATCCCGGGTGACAGCAAGAATA +
Preference number: 5 (lower is better)
Translates to: YYFAPPYLSFSEPRN*PSLPAIRSRVTARI
Trigger: TATTCTTGCTGTCACCCGGGATCTTATCGCAGGCAGGGATGGGCAGTTCCGCGGCTCGGAAAAGCTGAGATAAGGAGGGGCGAAGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS GCA 90 bp ACTGGGAGAAGAGACTCGGGAAGGCGGGGAACGGAAGGTGGGCATTaGCCTGGGAAACTCATGTCTGAGAAGCCTTTTGGCAGAGTATTT +
Preference number: 5 (lower is better)
Translates to: TGRRDSGRRGTEGGH*PGKLMSEKPFGRVF
Trigger: AAATACTCTGCCAAAAGGCTTCTCAGACATGAGTTTCCCAGGGCAATGCCCACCTTCCGTTCCCCGCCTTCCCGAGTCTCTTCTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514467.5
CDS-3UTR CAA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: DGLWPSRDLEALMLKGNLSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGGAGATGCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLDTGILSLVRCSLRWEMLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...CATCTCCCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: EEYSLSLDTGILSLVRCSHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...AGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SDSLSDLCISCLSLANFSGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GLGRSAFLTGVVLGSSELSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...CAACTCTGAGGACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS CCA 90 bp CAATGGCAAGCTCCCAGGGCAGCAACTACTGTCAGTTTGGCCCTATaGGAACCAAAGCCCATTGCATCTTCCCTGTCTGTGTCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: QWQAPRAATTVSLAL*EPKPIASSLSVSSN
Trigger: ATTGGAGGACACAGACAGGGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CCA 90 bp TCTCAGGACAATGGCAAGCTCCCAGGGCAGCAACTACTGTCAGTTTaGCCCTATGGGAACCAAAGCCCATTGCATCTTCCCTGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SQDNGKLPGQQLLSV*PYGNQSPLHLPCLC
Trigger: ACACAGACAGGGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGCCATTGTCCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CCA 90 bp CTCCAGAGTCTCTGGCTGATGTTTCAGTGGCGAAACCCGCTTCACTaGGCGGAACTTACTGTACACATCAGCGATTCCTGTGGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LQSLWLMFQWRNPLH*AELTVHISDSCGLL
Trigger: CAAAAGCCCACAGGAATCGCTGATGTGTACAGTAAGTTCCGCCCAGTGAAGCGGGTTTCGCCACTGAAACATCAGCCAGAGACTCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000506272.5
ENST00000508681.5
ENST00000509154.6
ENST00000510003.5
ENST00000514467.5
CDS-3UTR CAA 90 bp AATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCTTGGGGTCTTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: NGLRPWSVSLPHWGSLGVFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...GACCCCAAGACTACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCACCTGTAGAGCAGGCTTaGCCAGAAAGGCCATTGATG +
Preference number: 5 (lower is better)
Translates to: EDGDLRALLGLVATFWAAPVEQA*PERPLM
Trigger: CATCAATGGCCTTTCTGGCAAAGCCTGCTCTACAGG...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VQAFCAVHTLYAFYNGLRNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...CCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCTCACTGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PHWGSLGVLRVVGVCVRLNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...GAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGTATCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: DGDLRALLGLVATFWAAVSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...TACTGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCAGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: EDGDLRALLGLVATFWAAGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...TGCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: LSDLCISCLSLANFSSLFGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...GAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: LSALSILSTLSTMGCGLGLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...ACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: IQFKARLLHLHHRLLKGNLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...GTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTCTCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: DGELGEEGSDLPSDFWASLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...AGAAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: FWASRNCWSWFCSVTRSTQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...AGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RFVTCGGPLESPALIFVFGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ACGGCACTGTTGCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: TALLPSWSTSSNEMPCSCDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...GCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGCAACAGTGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCCCGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: PRFVTCGGPLESPALIFVLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...GACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: FVTCGGPLESPALIFVFFPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACACCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCCTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LASVFLPSEVKGNVEVFSLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...GCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCACACCTGTTTATTTGTaGCTGCGCCAACCTGATCAG +
Preference number: 5 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPTPVYL*LRQPDQ
Trigger: CTGATCAGGTTGGCGCAGCAACAAATAAACAGGTGT...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp CTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCAGTTCTGGGATCGTCTaGAGTGATGTGACTGAATAC +
Preference number: 5 (lower is better)
Translates to: LWPSRDLEALMLKGNLRPSSGIV*SDVTEY
Trigger: GTATTCAGTCACATCACTCAAGACGATCCCAGAACT...GGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTCAACTTCTCAGTGTaGCGCTCATTGAGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEVNFSV*RSLRQS
Trigger: AGACTGCCTCAATGAGCGCAACACTGAGAAGTTGAC...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR CAA 90 bp ATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: IQFKARLLHLHHRLLKGNEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...GTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: QVQAFCAVHTLYAFYNGLNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...CAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGGTAACTCTCAGTTTTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KARLLHLHHRLLKGNSQFSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...AAACTGAGAGTTACCTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LPTLWGKGGSINISKYSCQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: CFWLQNHHLHLEISTGTFQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...GAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTGCAGACTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: RGSLSILEFQGQFFLGADWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...GTCTGCACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LRCPTLGRWRLEGTLGTCWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...ACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTTCTGAGATGTCCTACGCTTGGAAGATGGAGACTTGAGGGCACTCTTGGGACTGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: VLRCPTLGRWRLEGTLGTDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...AGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAAGCGTAGGACATCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTTCTGCGCTGTCCATACTCTCTACGCTTTCTACAATGGGCTGCGGCCTTGGTTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: LSALSILSTLSTMGCGLGLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...ACCAAGGCCGCAGCCCATTGTAGAAAGCGTAGAGAGTATGGACAGCGCAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGGGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: EGHQRAGLEEYSLSLDTGVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...CCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ACGCTTTCTACAATGGGCTGCGGCCTTGGTCGGTCAGCCTTCCTCACTGGGGTAGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: TLSTMGCGLGRSAFLTGVVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...TACCCCAGTGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTGTAGAAAGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LSQICPHYGEREVQSTLAPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGCCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLEPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGAAAGGAAACCTGCGTCCCCCTGATGCCAAGGTGTGTTTCTTAATCATCAGGGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LKGNLRPPDAKVCFLIIRALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...CCTGATGATTAAGAAACACACCTTGGCATCAGGGGGACGCAGGTTTCCTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LILSFASGAGRVSLGICLALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS TCA 90 bp CTTCTGGTTTGGATTCTGCTGCTGAGGATTGTAGGTGGAAGGCCCTaGGCTGGCAGTCTGGTGTTGTCTTCTCAACTTTTCGACCATGAG +
Preference number: 5 (lower is better)
Translates to: LLVWILLLRIVGGRP*AGSLVLSSQLFDHE
Trigger: CTCATGGTCGAAAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGCAGCAGAATCCAAACCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 90 bp GTGTTGCGCTCATTGAGGCAGTCTTCTCCCATCAAAGAAGTGAGGTaGTGTAGACACTCTGCGTGTCCCTGTGACGCCGCAATATGTAAT +
Preference number: 5 (lower is better)
Translates to: VLRSLRQSSPIKEVR*CRHSACPCDAAICN
Trigger: ATTACATATTGCGGCGTCACAGGGACACGCAGAGTGTCTACAGCACCTCACTTCTTTGATGGGAGAAGACTGCCTCAATGAGCGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS GCA 90 bp GCTCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTGACATTTaGTCCATATTCAACCAAGGTCTGTTCTCATTTGCTTGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: ALGGLFPSVVLHGDI*SIFNQGLFSFAWAL
Trigger: TAGAGCCCAAGCAAATGAGAACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CCA 90 bp CTGACCTGCTCTTCTGGTTTGGATTCTGCTGCTGAGGATTGTAGGTaGAAGGCCCTGAGCTGGCAGTCTGGTGTTGTCTTCTCAACTTTT +
Preference number: 5 (lower is better)
Translates to: LTCSSGLDSAAEDCR*KALSWQSGVVFSTF
Trigger: AAAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS-3UTR CAA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGCAACTACTGTCAGTTaGGCCCTATGGGAACCAAAG +
Preference number: 5 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLATTVS*ALWEPK
Trigger: CTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGC...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCGATTCCTGTGGGCTTTaGCGTGTTTGTAATAAGAGT +
Preference number: 5 (lower is better)
Translates to: SRDLEALMLKGNLRPPDADSCGL*RVCNKS
Trigger: ACTCTTATTACAAACACGCAAAAGCCCACAGGAATC...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp TCAGACTCACTCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTTGCCAGAAAGGCCATaGATGGTTGTGCATAAGCCC +
Preference number: 5 (lower is better)
Translates to: SDSLSDLCISCLSLANFSLPERP*MVVHKP
Trigger: GGGCTTATGCACAACCATCAATGGCCTTTCTGGCAA...ACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGAGTGAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp GGAGATGGGCTGTGGCCATCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCAAAATGGTGCCATGTaGGATGATGAGCTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GDGLWPSRDLEALMLKGNQNGAM*DDELSE
Trigger: TTCTGAGAGCTCATCATCCAACATGGCACCATTTTG...GTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCACAGCCCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp GTGAGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: VRMVNWVKKGVTCPLISGSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...CCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: SDLCISCLSLANFSSLFSSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: PSWTPGLLLATESSSASGGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCAGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CGATTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: RFVTCGGPLESPALIFVFDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...AAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTATTCTTTCCTTTGCTAGCGGAGCTGGCAGGGTTTCCCTTGGCATCTGTCTTGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: LILSFASGAGRVSLGICLDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...AAGACAGATGCCAAGGGAAACCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGGATGGTGAACTGGGTGAAGAAGGGAGTGACTTGCCCTCTGATTTCTGGGCTTTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: RMVNWVKKGVTCPLISGLLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...AAGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTCACCCAGTTCACCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCACCCCCGATTCGTTACTaGTGGAGGTCCGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPPPIRY*WRSAGE
Trigger: CTCTCCAGCGGACCTCCACAAGTAACGAATCGGGGG...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCACTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: LSQICPHYGEREVQSTLALAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: DSWLAFGYRIIICIWRFPLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...TGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: MKELSQICPHYGEREVQSALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GGAAGATGGAGACTTGAGGGCACTCTTGGGACTTGTGGCAACTTTCTGGGCAGCTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: GRWRLEGTLGTCGNFLGSSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...GCTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GGTCACCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCAGAACATCACAGATTaGTTAGAAAGTAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: GHQRAGLEEYSLSLDTGIQNITD*LESRCP
Trigger: GGGGCACCTACTTTCTAACAAATCTGTGATGTTCTG...AATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508017.5
CDS-3UTR CAA 90 bp GGGTTTCCCTTGGCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGAAAAAGAACTCCTTCTaGTCCTTGACACTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GFPLASVFLPSEVKGNVEKKNSF*SLTLQP
Trigger: GGGCTGCAGTGTCAAGGACAAGAAGGAGTTCTTTTT...CTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGCCAAGGGAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS TCA 90 bp CTCGGTTTCTTCAGTGGACAGCTTGTGCTGGTCGTGGATGACAGCTaGTGCTTTTCTCAAGTGAGGGCTTTTCACGGGAGAAAGAACACA +
Preference number: 5 (lower is better)
Translates to: LGFFSGQLVLVVDDS*CFSQVRAFHGRKNT
Trigger: TGTGTTCTTTCTCCCGTGAAAAGCCCTCACTTGAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACTGAAGAAACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 90 bp GTGAGATCTCGGTTTCTTCAGTGGACAGCTTGTGCTGGTCGTGGATaGCAGCTGATGCTTTTCTCAAGTGAGGGCTTTTCACGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: VRSRFLQWTACAGRG*QLMLFSSEGFSREK
Trigger: TTTCTCCCGTGAAAAGCCCTCACTTGAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGATCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 90 bp CTGGTTTTCAGGCTCATATGCAGAGCCACATTTAACCAGAGGAGGTaGGATCTCGGTTTCTTCAGTGGACAGCTTGTGCTGGTCGTGGAT +
Preference number: 5 (lower is better)
Translates to: LVFRLICRATFNQRR*DLGFFSGQLVLVVD
Trigger: ATCCACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGATCTCACCTCCTCTGGTTAAATGTGGCTCTGCATATGAGCCTGAAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS-3UTR CAA 90 bp CCAGAGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGAGTTCTGGGATCGTCTaGAGTGATGTGACTGAATAC +
Preference number: 5 (lower is better)
Translates to: PEGWFGGILPEPGYWDSKSSGIV*SDVTEY
Trigger: GTATTCAGTCACATCACTCAAGACGATCCCAGAACT...CTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTCAGTGTTGCGCTCATaGAGGCAGTCTTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: GLLLATESSSASGDFHWDSVLRS*RQSSPI
Trigger: GATGGGAGAAGACTGCCTCAATGAGCGCAACACTGA...GTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR CAA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VCFLIIRCRLSALSILSTSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCCATCCTGGTCTACTTCATCCAACGAGATGCCCTGTTCTTGCATAAACTGAAGGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: AILVYFIQRDALFLHKLKGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...CTTCAGTTTATGCAAGAACAGGGCATCTCGTTGGATGAAGTAGACCAGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395466.6
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCCTCTGATTTCTGGGCTTCTAGAAATTGTTGGAGTTGGTTCTGCAGCGTGACATTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: PSDFWASRNCWSWFCSVTLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...TGTCACGCTGCAGAACCAACTCCAACAATTTCTAGAAGCCCAGAAATCAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: VCFLIIRCRLSALSILSTLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLELTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTTCCTGGGTCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: ISRGSLSILEFQGQFFLGLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...ACCCAGGAAAAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LFRISRGSLSILEFQGQFQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGAATGGTATCAGTGGCTaGGTGAATGTCCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSENGISG*VNVLWV
Trigger: TACCCACAGGACATTCACCAAGCCACTGATACCATT...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AGGGCTGGTTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGAATGGTATCAGTGGCTaGGTGAATGTCCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: RAGLEEYSLSLDTGILSLNGISG*VNVLWV
Trigger: TACCCACAGGACATTCACCAAGCCACTGATACCATT...CAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAACCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS TCA 90 bp TTGAATCTTGAGTCTAGTCTGTATGCATCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACTGTTGCCATCCTGGTCTACTTCATC +
Preference number: 5 (lower is better)
Translates to: LNLESSLYASKVAML*GYVNGTVAILVYFI
Trigger: GATGAAGTAGACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGACTAGACTCAAGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS GCA 90 bp TATACTCATTTCTCATTGCAAAACAGCAGGGCCTGTGTACCTGTATaGATCCAAGGTAGCCATGCTGTGAGGCTACGTGAACGGCACTGT +
Preference number: 5 (lower is better)
Translates to: YTHFSLQNSRACVPV*IQGSHAVRLRERHC
Trigger: ACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGGTACACAGGCCCTGCTGTTTTGCAATGAGAAATGAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS-3UTR CAA 90 bp TCCAGGGATTTGGAGGCCTTGATGCTGAAAGGAAACCTGCGTCCCCCTGATGCCTCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: SRDLEALMLKGNLRPPDASSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...GGCATCAGGGGGACGCAGGTTTCCTTTCAGCATCAAGGCCTCCAAATCCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCATTGCCAGAAAGGCCATaGATGGTTGTGCATAAGCCC +
Preference number: 5 (lower is better)
Translates to: MKELSQICPHYGEREVQSLPERP*MVVHKP
Trigger: GGGCTTATGCACAACCATCAATGGCCTTTCTGGCAA...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LSQICPHYGEREVQSTLAEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: KVCFLIIRCRLSALSILSEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KVCFLIIRCRLSALSILSSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...AGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLEGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTATTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCACTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTATCTTTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LSLSFSPFSSRLGCSICTLTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...GGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAAAGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCAATGGGCTGCGGCCTaGGTCGGTCAGCCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIQWAAA*VGQPSS
Trigger: TGAGGAAGGCTGACCGACCAAGGCCGCAGCCCATTG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: WLPLSVSMIDRKAPKGLFWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...GAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLEWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGCTTTCTTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: FLIIRCRLSALSILSTLSWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...AGAAAGCGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: QWDLFRISRGSLSILEFQGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...TTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGTTGCCGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RGFQLVGCLVVIIIVLVAGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...GGCAACCAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: LSQICPHYGEREVQSTLADLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LPTLWGKGGSINISKYSCALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCCTTTTCAGTGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LPLSVSMIDRKAPKGLFSALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...ACTGAAAAGGCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTGCTTGGTTAACTTCACCACTGCCTTATTCTTTCCTTaGCTAGCGGAGCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SVTRSTVCSFSCLVNFTTALFFP*LAELAG
Trigger: CCCTGCCAGCTCCGCTAGCAAAGGAAAGAATAAGGC...AGTGGTGAAGTTAACCAAGCAGCTAAAGGAACAAACAGTAGAACGTGTCACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGATGTTAGAGGAAAGATaGATGCAGCTGCTGTACATT +
Preference number: 5 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWMLEER*MQLLYI
Trigger: AATGTACAGCAGCTGCATCAATCTTTCCTCTAACAT...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS CCA 90 bp GACAGATGTCTGCCTGGTAGTGGTTTCTCTGGTGCCTTGAGAACATaGGGAAATTTAATGTCTATTGTCCTCAGCACTGGGGCTTTAGAG +
Preference number: 5 (lower is better)
Translates to: DRCLPGSGFSGALRT*GNLMSIVLSTGALE
Trigger: CTCTAAAGCCCCAGTGCTGAGGACAATAGACATTAAATTTCCCCATGTTCTCAAGGCACCAGAGAAACCACTACCAGGCAGACATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS CCA 90 bp CATAGTGTGCTCTCCTTTATGAGATATGCAGTGCAGTCTTTGTGGTaGGGAGTTCTGTCTCTTGTCATGGTTGGGCTCCAAGAGAATCAC +
Preference number: 5 (lower is better)
Translates to: HSVLSFMRYAVQSLW*GVLSLVMVGLQENH
Trigger: GTGATTCTCTTGGAGCCCAACCATGACAAGAGACAGAACTCCCCACCACAAAGACTGCACTGCATATCTCATAAAGGAGAGCACACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS CCA 90 bp GTCCATAGTGTGCTCTCCTTTATGAGATATGCAGTGCAGTCTTTGTaGTGGGGAGTTCTGTCTCTTGTCATGGTTGGGCTCCAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: VHSVLSFMRYAVQSL*WGVLSLVMVGLQEN
Trigger: ATTCTCTTGGAGCCCAACCATGACAAGAGACAGAACTCCCCACCACAAAGACTGCACTGCATATCTCATAAAGGAGAGCACACTATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS-3UTR CAA 90 bp TGGGGTAGTCTTGGGGTCCTCAGAGTTGTTGGAGTCTGTGTCAGACTCACTCAGTTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: WGSLGVLRVVGVCVRLTQFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...CTGAGTGAGTCTGACACAGACTCCAACAACTCTGAGGACCCCAAGACTACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTTGGAGGAATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGAGTTCTGGGATCGTCTaGAGTGATGTGACTGAATAC +
Preference number: 5 (lower is better)
Translates to: FGGILPEPGYWDSKSGSLSSGIV*SDVTEY
Trigger: GTATTCAGTCACATCACTCAAGACGATCCCAGAACT...CAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTATTCCTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTGGCACTTTCTGGTTCTTTaGGTCATCACTTTCATTGTT +
Preference number: 5 (lower is better)
Translates to: SLSLDTGILSLVRCSLRWHFLVL*VITFIV
Trigger: AACAATGAAAGTGATGACCAAAAGAACCAGAAAGTG...CCACCTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTACCTGCTCTTCTGGTTaGGATTCTGCTGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLTCSSG*DSAAED
Trigger: ATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGT...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAACCTGCTCTTCTGGTTaGGATTCTGCTGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLTCSSG*DSAAED
Trigger: ATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTCAGTGTTGCGCTCATaGAGGCAGTCTTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: LPTLWGKGGSINISKYSCSVLRS*RQSSPI
Trigger: GATGGGAGAAGACTGCCTCAATGAGCGCAACACTGA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATCAGTGTTGCGCTCATaGAGGCAGTCTTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPESVLRS*RQSSPI
Trigger: GATGGGAGAAGACTGCCTCAATGAGCGCAACACTGA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLATESSSASGDFHWDFLEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTACGTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: VCFLIIRCRLSALSILSTSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...CGTAGAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSQICPHYGEREVQSTLANLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LPTLWGKGGSINISKYSCSSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGATTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPELGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LPTLWGKGGSINISKYSCWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TCAGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: SVTSASAVSAWLTSVPSSVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...AGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp ATACTCCCTGAGCCTGGATACTGGGATTCTAAGTCTGGTTCGCTGCTCTCTGAGGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: ILPEPGYWDSKSGSLLSEVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...CTCAGAGAGCAGCGAACCAGACTTAGAATCCCAGTATCCAGGCTCAGGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GCATCTGTCTTCCTCCCAAGTGAGGTCAAGGGCAATGTAGAGGTTTTCAGCTGGGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: ASVFLPSEVKGNVEVFSWVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...CCAGCTGAAAACCTCTACATTGCCCTTGACCTCACTTGGGAGGAAGACAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGCCTTCTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: FNQHVRGKIDAAAVHFCLLAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...AAGGCAGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCCTCAAAGATGTTAGAGGAAAGATaGATGCAGCTGCTGTACATT +
Preference number: 5 (lower is better)
Translates to: SPFSSRLGCSICTTGSSKMLEER*MQLLYI
Trigger: AATGTACAGCAGCTGCATCAATCTTTCCTCTAACAT...CTTTGAGGAGCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGTCTTTTTCTCCATTCAGTTCAAGGCTAGGCTGCTCCATCTGCACCACAGGCTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LSFSPFSSRLGCSICTTGSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...GCCTGTGGTGCAGATGGAGCAGCCTAGCCTTGAACTGAATGGAGAAAAAGACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAAATGGTATCAGTGGCTaGGTGAATGTCCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: MKELSQICPHYGEREVQSNGISG*VNVLWV
Trigger: TACCCACAGGACATTCACCAAGCCACTGATACCATT...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS GCA 90 bp ACTGGGCGGAACTTACTGTACACATCAGCGATTCCTGTGGGCTTTTaGGTGTTTGTAATAAGAGTTGAGATGCCACAATTCCAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: TGRNLLYTSAIPVGF*VFVIRVEMPQFQLE
Trigger: CTCTAGCTGGAATTGTGGCATCTCAACTCTTATTACAAACACGCAAAAGCCCACAGGAATCGCTGATGTGTACAGTAAGTTCCGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000506272.5
ENST00000508681.5
ENST00000509154.6
ENST00000510003.5
ENST00000514467.5
CDS CCA 90 bp TGGGTGCCAGGATATGGTATAAACATCAGCAGGAACATGGAAATATaGGGAGATGAAGCAGAGAAACATGCATCGAAGCTGGGGACCAAA +
Preference number: 5 (lower is better)
Translates to: WVPGYGINISRNMEI*GDEAEKHASKLGTK
Trigger: TTTGGTCCCCAGCTTCGATGCATGTTTCTCTGCTTCATCTCCCCATATTTCCATGTTCCTGCTGATGTTTATACCATATCCTGGCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp AGTGACCTCTGCATCAGCTGTCTCAGCCTGGCTAACTTCAGTTCCCTCTTCTCCTCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: SDLCISCLSLANFSSLFSSSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...GGAGAAGAGGGAACTGAAGTTAGCCAGGCTGAGACAGCTGATGCAGAGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp ATGAAGGAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAAGTTCTGGGATCGTCTaGAGTGATGTGACTGAATAC +
Preference number: 5 (lower is better)
Translates to: MKELSQICPHYGEREVQSSSGIV*SDVTEY
Trigger: GTATTCAGTCACATCACTCAAGACGATCCCAGAACT...TGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTCCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATCCTGTAGAGCAGGCTTaGCCAGAAAGGCCATTGATG +
Preference number: 5 (lower is better)
Translates to: SQICPHYGEREVQSTLANPVEQA*PERPLM
Trigger: CATCAATGGCCTTTCTGGCAAAGCCTGCTCTACAGG...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: SQICPHYGEREVQSTLANGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: CPHYGEREVQSTLANTHALGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCACCAGAGGGCTGGTTaGGAGGAATACTCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIHQRAG*EEYSLS
Trigger: GCTCAGGGAGTATTCCTCCAAACCAGCCCTCTGGTG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGGGCACTCTTGGGACTaGTGGCAACTTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIGHSWD*WQLSGQ
Trigger: CTGCCCAGAAAGTTGCCACAAGTCCCAAGAGTGCCC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGATTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAAGGTGTGTTTCTTAATCATCAGGTGCAGGCTTTCTGCGCTGTCCATACTCTCTCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QGVFLNHQVQAFCAVHTLSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...GAGAGTATGGACAGCGCAGAAAGCCTGCACCTGATGATTAAGAAACACACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGAATGGTATCAGTGGCTaGGTGAATGTCCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLENGISG*VNVLWV
Trigger: TACCCACAGGACATTCACCAAGCCACTGATACCATT...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGCCCATTCCAAGTCCCTaGAATCTTGAGTCTAGTCTG +
Preference number: 5 (lower is better)
Translates to: SWLAFGYRIIICIWRFPLPIPSP*NLESSL
Trigger: CAGACTAGACTCAAGATTCAAGGGACTTGGAATGGG...CAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGAGCAACTACTGTCAGTTaGGCCCTATGGGAACCAAAG +
Preference number: 5 (lower is better)
Translates to: WDLFRISRGSLSILEFQGATTVS*ALWEPK
Trigger: CTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGC...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395469.6
ENST00000512146.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAACCTGTAGAGCAGGCTTaGCCAGAAAGGCCATTGATG +
Preference number: 5 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQPVEQA*PERPLM
Trigger: CATCAATGGCCTTTCTGGCAAAGCCTGCTCTACAGG...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTCAAAATGGTGCCATGTaGGATGATGAGCTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLQNGAM*DDELSE
Trigger: TTCTGAGAGCTCATCATCCAACATGGCACCATTTTG...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACAAAATGGTGCCATGTaGGATGATGAGCTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLQNGAM*DDELSE
Trigger: TTCTGAGAGCTCATCATCCAACATGGCACCATTTTG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCGCTGGCAGTCTGGTGTaGTCTTCTCAACTTTTCGAC +
Preference number: 5 (lower is better)
Translates to: NQNITDLLESRCPKLIGGAGSLV*SSQLFD
Trigger: GTCGAAAAGTTGAGAAGACAACACCAGACTGCCAGC...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS-3UTR CAA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTTCAGTGTTGCGCTCATaGAGGCAGTCTTCTCCCATC +
Preference number: 5 (lower is better)
Translates to: LFRISRGSLSILEFQGQFSVLRS*RQSSPI
Trigger: GATGGGAGAAGACTGCCTCAATGAGCGCAACACTGA...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR CAA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGTCAACTTCTCAGTGTaGCGCTCATTGAGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SQICPHYGEREVQSTLANVNFSV*RSLRQS
Trigger: AGACTGCCTCAATGAGCGCAACACTGAGAAGTTGAC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp TGCTCTTCAATCAGCATGTTAGAGGAAAGATTGATGCAGCTGCTGTACATTTCTGAAGAAGGGAGTGACTaGCCCTCTGATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: CSSISMLEERLMQLLYISEEGSD*PSDFWA
Trigger: AGCCCAGAAATCAGAGGGCAAGTCACTCCCTTCTTC...AGAAATGTACAGCAGCTGCATCAATCTTTCCTCTAACATGCTGATTGAAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPESWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGTTTTGGTTGCCACTTAGTGTCTCCATGATAGATCGAAAGGCTCCAAAAGGCTCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: LFWLPLSVSMIDRKAPKGSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...GCCTTTTGGAGCCTTTCGATCTATCATGGAGACACTAAGTGGCAACCAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGATCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: FGYRIIICIWRFPLGLSGSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...TCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp TGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGAAACCTGAATCCCCTCTaGGACTCCTGGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: WDLFRISRGSLSILEFQGNLNPL*DSWLAF
Trigger: AAAAGCAAGCCAGGAGTCCAAGAGGGGATTCAGGTT...TCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCTCACTGGGGTAGTCTaGGGGTCCTCAGAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAILTGVV*GSSELL
Trigger: CAACAACTCTGAGGACCCCAAGACTACCCCAGTGAG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTGGCCATCCAGGGATTaGGAGGCCTTGATGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIWPSRD*EALMLK
Trigger: TTTCAGCATCAAGGCCTCCAAATCCCTGGATGGCCA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTGACTTGAGGGCACTCTaGGGACTTGTGGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIDLRAL*GLVATF
Trigger: GAAAGTTGCCACAAGTCCCAAGAGTGCCCTCAAGTC...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: SQICPHYGEREVQSTLANLEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAAATGGTATCAGTGGCTaGGTGAATGTCCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPENGISG*VNVLWV
Trigger: TACCCACAGGACATTCACCAAGCCACTGATACCATT...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS TCA 90 bp GCCCTGAGCTGGCAGTCTGGTGTTGTCTTCTCAACTTTTCGACCATaGGGATCACTAAATGTCTTGTTTAGGAAGTCTTTACTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: ALSWQSGVVFSTFRP*GSLNVLFRKSLLWF
Trigger: AAACCAGAGTAAAGACTTCCTAAACAAGACATTTAGTGATCCTCATGGTCGAAAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTACAGGAATCTTTCAATTaGCACTTGCAGGATGGTAGT +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLQESFN*HLQDGS
Trigger: ACTACCATCCTGCAAGTGCAAATTGAAAGATTCCTG...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp TGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTACTCTTGACAGCAATATCCAGTaGAGTGTAGCCATTCCAATA +
Preference number: 5 (lower is better)
Translates to: WYQWLGECPVGRVNQSTLDSNIQ*SVAIPI
Trigger: TATTGGAATGGCTACACTCAACTGGATATTGCTGTC...AAGAGTAGATTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTCTGTTCCCACGGCCTaGGTGAACAACACACAGATG +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAISVPTA*VNNTQM
Trigger: CATCTGTGTGTTGTTCACCAAGGCCGTGGGAACAGA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp CCCTCTTGGACTCCTGGCTTGCTTTTGGCTACAGAATCATCATCTGCATCTGGATCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: PSWTPGLLLATESSSASGSSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...TCCAGATGCAGATGATGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTCGTTACTTGTGGAGGTCCGCTGGAGAGTCCTGCCCTTATCTTTGTCTTTTTCTTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: FVTCGGPLESPALIFVFFFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...GAAAAAGACAAAGATAAGGGCAGGACTCTCCAGCGGACCTCCACAAGTAACGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTGCAACTACTGTCAGTTaGGCCCTATGGGAACCAAAG +
Preference number: 5 (lower is better)
Translates to: QICPHYGEREVQSTLANTATTVS*ALWEPK
Trigger: CTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGC...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTGCAACTACTGTCAGTTaGGCCCTATGGGAACCAAAG +
Preference number: 5 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEIATTVS*ALWEPK
Trigger: CTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGC...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000542191.5
CDS-3UTR CAA 90 bp CAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTTTGCCAGAAAGGCCATaGATGGTTGTGCATAAGCCC +
Preference number: 5 (lower is better)
Translates to: QICPHYGEREVQSTLANTLPERP*MVVHKP
Trigger: GGGCTTATGCACAACCATCAATGGCCTTTCTGGCAA...AGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATCTTCAGTGGACAGCTaGTGCTGGTCGTGGATGACA +
Preference number: 5 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRSSVDS*CWSWMT
Trigger: TGTCATCCACGACCAGCACAAGCTGTCCACTGAAGA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTCTTCAGTGGACAGCTaGTGCTGGTCGTGGATGACA +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAISSVDS*CWSWMT
Trigger: TGTCATCCACGACCAGCACAAGCTGTCCACTGAAGA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAGCTGGCAGTCTGGTGTaGTCTTCTCAACTTTTCGAC +
Preference number: 5 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQAGSLV*SSQLFD
Trigger: GTCGAAAAGTTGAGAAGACAACACCAGACTGCCAGC...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCCAAGGACAGTTTGTCAACTTCTCAGTGTaGCGCTCATTGAGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: LFRISRGSLSILEFQGQFVNFSV*RSLRQS
Trigger: AGACTGCCTCAATGAGCGCAACACTGAGAAGTTGAC...AAACTGTCCTTGGAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395466.6
ENST00000395469.6
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTTCTTCATCTTTTGCTTaGGGTCTAGCCCGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAISSSFA*GLARLE
Trigger: CTCCAGCCGGGCTAGACCCAAAGCAAAAGATGAAGA...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CAATGTAGAGGTTTTCAGCTGGTTGGCTGCCTGGTAGTTATTATTATTGTTTTGGGGTCCTCAGAGTTGTaGGAGTCTGTGTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: QCRGFQLVGCLVVIIIVLGSSEL*ESVSDS
Trigger: TGAGTCTGACACAGACTCCAACAACTCTGAGGACCC...CAAAACAATAATAATAACTACCAGGCAGCCAACCAGCTGAAAACCTCTACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAAATTTTGGAAGATGGAGACTaGAGGGCACTCTTGGGACTT +
Preference number: 5 (lower is better)
Translates to: LVRHCFHGSLSKEDSPEILEDGD*RALLGL
Trigger: AAGTCCCAAGAGTGCCCTCAAGTCTCCATCTTCCAA...AATTTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLEVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAACTGGCAGGGTTTCCCTaGGCATCTGTCTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: QTFSEISFPNNWRKILSELAGFP*ASVFLP
Trigger: TGGGAGGAAGACAGATGCCAAGGGAAACCCTGCCAG...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCATCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPSAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGAGATAACACCTGTTTATTaGTTGCTGCGCCAACCTGAT +
Preference number: 5 (lower is better)
Translates to: LATESSSASGDFHWDFLEITPVY*LLRQPD
Trigger: ATCAGGTTGGCGCAGCAACAAATAAACAGGTGTTAT...CTCCAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTAGAGTGAGTCTGCAGTaGTCCCAGTGGCCAATACAA +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIRVSLQ*SQWPIQ
Trigger: TTGTATTGGCCACTGGGACAACTGCAGACTCACTCT...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGTCTGGTTTCAATGCTaGTCTCTTTCAGGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIVWFQC*SLSGCH
Trigger: GTGGCACCCTGAAAGAGACAAGCATTGAAACCAGAC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp CTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCAGAATACAATCCAGACTCTTaGGATACTAGCGTGTTCACT +
Preference number: 5 (lower is better)
Translates to: LLVRHCFHGSLSKEDSPEYNPDS*DTSVFT
Trigger: AGTGAACACGCTAGTATCCAAAGAGTCTGGATTGTA...TTCTGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGTCAACTTCTCAGTGTaGCGCTCATTGAGGCAGTCT +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIVNFSV*RSLRQS
Trigger: AGACTGCCTCAATGAGCGCAACACTGAGAAGTTGAC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATTTGGGGTCCTCAGAGTaGTTGGAGTCTGTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: EDSPEISNNFQRASVRENLGSSE*LESVSD
Trigger: GTCTGACACAGACTCCAACAACTCTGAGGACCCCAA...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp CTCCAGTGGGATCTTTTTAGAATTTCTAGAGGAAGCCTGAGCATCCTGGAATTCGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: LQWDLFRISRGSLSILEFVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...GAATTCCAGGATGCTCAGGCTTCCTCTAGAAATTCTAAAAAGATCCCACTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp CTTTTGGCTACAGAATCATCATCTGCATCTGGAGATTTCCACTGGGACTTTCTGGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: LLATESSSASGDFHWDFLVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...CAGAAAGTCCCAGTGGAAATCTCCAGATGCAGATGATGATTCTGTAGCCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS-3UTR CAA 90 bp GAGCTGAGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAATGTTAGAGGAAAGATaGATGCAGCTGCTGTACATT +
Preference number: 5 (lower is better)
Translates to: ELSQICPHYGEREVQSTLMLEER*MQLLYI
Trigger: AATGTACAGCAGCTGCATCAATCTTTCCTCTAACAT...TAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCTCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261367.11
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATCTGCTGGTGAGGCATaGTTTTCATGGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: CPHYGEREVQSTLANTHASAGEA*FSWFSF
Trigger: GAAAGAGAACCATGAAAACAATGCCTCACCAGCAGA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACAGAACATCACAGATTaGTTAGAAAGTAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: CPHYGEREVQSTLANTHAQNITD*LESRCP
Trigger: GGGGCACCTACTTTCTAACAAATCTGTGATGTTCTG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS CCA 90 bp TTTAGAGCAGTGATAAGGGAGCAGGAAAAGTCCCTTTCAACACCCTaGGACACTGAAAGAGAAACTCTTATGGATATTTATGCCTACCTA +
Preference number: 5 (lower is better)
Translates to: FRAVIREQEKSLSTP*DTERETLMDIYAYL
Trigger: TAGGTAGGCATAAATATCCATAAGAGTTTCTCTTTCAGTGTCCCAGGGTGTTGAAAGGGACTTTTCCTGCTCCCTTATCACTGCTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTCCATTGCACCCCTGTTaGAGGTGCTCCAACAATATA +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIPLHPC*RCSNNI
Trigger: TATATTGTTGGAGCACCTCAAACAGGGGTGCAATGG...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp CTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGAGGATAGTCCATTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: LLLVRHCFHGSLSKEDSPFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...TGGACTATCCTCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp GTCATTATGCCGTGTGTCGTTACACAGATGCTCTTCAATCAGCATGTTAGAGGATTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: VIMPCVVTQMLFNQHVRGFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...TCCTCTAACATGCTGATTGAAGAGCATCTGTGTAACGACACACGGCATAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRSWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATGTCCTGCCCTTATCTTaGTCTTTTTCTCCATTCAGT +
Preference number: 5 (lower is better)
Translates to: SQICPHYGEREVQSTLANVLPLS*SFSPFS
Trigger: ACTGAATGGAGAAAAAGACAAAGATAAGGGCAGGAC...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS TCA 90 bp AAATCAAGGTATTCAGGGGCTTCCATTATTCTTCCTTGCACATTTTaGGTACGGTCAAATACTTATAAATTCCTTGGCCAGTGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: KSRYSGASIILPCTF*VRSNTYKFLGQCGG
Trigger: GCCACCACACTGGCCAAGGAATTTATAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGAATAATGGAAGCCCCTGAATACCTTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509154.6
ENST00000509652.1
ENST00000514497.6
CDS-3UTR CAA 90 bp GAGGATAGTCCAGAAATTTCCAATAATTTCCAAAGGGCATCAGTGAGAGAAAATATTTATTTCTGTGGGTaGGATGGCCCCACCTTAGAC +
Preference number: 5 (lower is better)
Translates to: EDSPEISNNFQRASVRENIYFCG*DGPTLD
Trigger: GTCTAAGGTGGGGCCATCCAACCCACAGAAATAAAT...ATTTTCTCTCACTGATGCCCTTTGGAAATTATTGGAAATTTCTGGACTATCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAATCTTTCAATTTGCACTaGCAGGATGGTAGTGAGGTT +
Preference number: 5 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQSFNLH*QDGSEV
Trigger: AACCTCACTACCATCCTGCAAGTGCAAATTGAAAGA...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS-3UTR CAA 90 bp AATTGTTGGAGTTGGTTCTGCAGCGTGACACGTTCTACTGTTTGTTCCTTTAGCTCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: NCWSWFCSVTRSTVCSFSSSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...GCTAAAGGAACAAACAGTAGAACGTGTCACGCTGCAGAACCAACTCCAACAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AGCCAAATCTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATTTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: SQICPHYGEREVQSTLANFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...ATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAGATTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AATATAAAATGGTATCAGTGGCTTGGTGAATGTCCTGTGGGTAGGGTGAATCAAGATTCCTGTGGGCTTTaGCGTGTTTGTAATAAGAGT +
Preference number: 5 (lower is better)
Translates to: NIKWYQWLGECPVGRVNQDSCGL*RVCNKS
Trigger: ACTCTTATTACAAACACGCAAAAGCCCACAGGAATC...TTGATTCACCCTACCCACAGGACATTCACCAAGCCACTGATACCATTTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp CTGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCCAGCAATCAAAATACTaGCAAAGTCCCTTAGAAATC +
Preference number: 5 (lower is better)
Translates to: LPTLWGKGGSINISKYSCQQSKY*QSPLEI
Trigger: GATTTCTAAGGGACTTTGCAAGTATTTTGATTGCTG...GCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS CCA 90 bp AAAAGTCCCTTTCAACACCCTGGGACACTGAAAGAGAAACTCTTATaGATATTTATGCCTACCTACATTTGTGTGGATTTCTGGAAACAC +
Preference number: 5 (lower is better)
Translates to: KSPFQHPGTLKEKLL*IFMPTYICVDFWKH
Trigger: GTGTTTCCAGAAATCCACACAAATGTAGGTAGGCATAAATATCCATAAGAGTTTCTCTTTCAGTGTCCCAGGGTGTTGAAAGGGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS-3UTR CAA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCATCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: CPHYGEREVQSTLANTHASSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS-3UTR CAA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCTCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: NQNITDLLESRCPKLIGGSSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261368.13
ENST00000508017.5
CDS-3UTR CAA 90 bp CCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCAATTGATTCCTGTGGGCTTTaGCGTGTTTGTAATAAGAGT +
Preference number: 5 (lower is better)
Translates to: PHYGEREVQSTLANTHAIDSCGL*RVCNKS
Trigger: ACTCTTATTACAAACACGCAAAAGCCCACAGGAATC...AATTGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp TGCCCACATTATGGGGAAAGGGAGGTTCAATCAACATTAGCAAATACTCATGCACACTTTCTGGTTCTTTaGGTCATCACTTTCATTGTT +
Preference number: 5 (lower is better)
Translates to: CPHYGEREVQSTLANTHAHFLVL*VITFIV
Trigger: AACAATGAAAGTGATGACCAAAAGAACCAGAAAGTG...TGCATGAGTATTTGCTAATGTTGATTGAACCTCCCTTTCCCCATAATGTGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261367.11
ENST00000261368.13
CDS-3UTR CAA 90 bp AATCAGAACATCACAGATTTGTTAGAAAGTAGGTGCCCCAAGCTTATAGGTGGCCACTTTCTGGTTCTTTaGGTCATCACTTTCATTGTT +
Preference number: 5 (lower is better)
Translates to: NQNITDLLESRCPKLIGGHFLVL*VITFIV
Trigger: AACAATGAAAGTGATGACCAAAAGAACCAGAAAGTG...GCCACCTATAAGCTTGGGGCACCTACTTTCTAACAAATCTGTGATGTTCTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261368.13
CDS-3UTR CAA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAATCTTGGACTCCTGGCTaGCTTTTGGCTACAGAATCA +
Preference number: 5 (lower is better)
Translates to: QTFSEISFPNNWRKILSESWTPG*LLATES
Trigger: TGATTCTGTAGCCAAAAGCAAGCCAGGAGTCCAAGA...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000395466.6
ENST00000395469.6
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS CCA 90 bp CAACCAAGGTCTGTTCTCATTTGCTTGGGCTCTAGTAACTGGATTTaGTCTCTGGTAATTGGTTTTGAAATAACACCTGTTTATTTGTTG +
Preference number: 5 (lower is better)
Translates to: QPRSVLICLGSSNWI*SLVIGFEITPVYLL
Trigger: CAACAAATAAACAGGTGTTATTTCAAAACCAATTACCAGAGACCAAATCCAGTTACTAGAGCCCAAGCAAATGAGAACAGACCTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS-3UTR CAA 90 bp ATATTCTGTTCTTCTGCTGGTGAGGCATTGTTTTCATGGTTCTCTTTCCAAAGATTCCATTATTCTTCCTaGCACATTTTGAGTACGGTC +
Preference number: 5 (lower is better)
Translates to: IFCSSAGEALFSWFSFQRFHYSS*HILSTV
Trigger: GACCGTACTCAAAATGTGCAAGGAAGAATAATGGAA...TCTTTGGAAAGAGAACCATGAAAACAATGCCTCACCAGCAGAAGAACAGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS TCA 90 bp AAATCAAGGTATTCAGGGGCTTCCATTATTCTTCCTTGCACATTTTaGGTACGGTCAAATACTTATAAATTCCGTGATCCAAGCGTTAAC +
Preference number: 5 (lower is better)
Translates to: KSRYSGASIILPCTF*VRSNTYKFRDPSVN
Trigger: GTTAACGCTTGGATCACGGAATTTATAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGAATAATGGAAGCCCCTGAATACCTTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514467.5
CDS CCA 90 bp CATATTCAACCAAGGTCTGTTCTCATTTGCTTGGGCTCTAGTAACTaGATTTGGTCTCTGGTAATTGGTTTTGAAATAACACCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: HIQPRSVLICLGSSN*IWSLVIGFEITPVY
Trigger: ATAAACAGGTGTTATTTCAAAACCAATTACCAGAGACCAAATCCAGTTACTAGAGCCCAAGCAAATGAGAACAGACCTTGGTTGAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS TCA 90 bp AAATCAAGGTATTCAGGGGCTTCCATTATTCTTCCTTGCACATTTTaGGTACGGTCAAATACTTATAAATTCCTGCTCTTTCTTTACCTT +
Preference number: 5 (lower is better)
Translates to: KSRYSGASIILPCTF*VRSNTYKFLLFLYL
Trigger: AAGGTAAAGAAAGAGCAGGAATTTATAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGAATAATGGAAGCCCCTGAATACCTTGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506272.5
CDS-3UTR CAA 90 bp CAGACATTTTCTGAGATTTCCTTTCCCAATAACTGGCGTAAGATTTTATCAGAATCTTCCTTGCACATTTaGAGTACGGTCAAATACTTA +
Preference number: 5 (lower is better)
Translates to: QTFSEISFPNNWRKILSESSLHI*STVKYL
Trigger: TAAGTATTTGACCGTACTCAAAATGTGCAAGGAAGA...TTCTGATAAAATCTTACGCCAGTTATTGGGAAAGGAAATCTCAGAAAATGTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508017.5
ENST00000509023.5
ENST00000510658.5
ENST00000512385.5
ENST00000542191.5
CDS TCA 72 bp GCCCGGCGCGCCGGCGGCTCAGGAGCGCGAAGGGACTaGCTGACCGACCGACGGACCGCAGCGGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: ARRAGGSGARRD*LTDRRTAAAGA
Trigger: TGCTCCTGCCGCTGCGGTCCGTCGGTCGGTCAGTCAGTCCCTTCGCGCTCCTGAGCCGCCGGCGCGCCGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000512385.5
ENST00000514497.6
ENST00000542191.5
CDS GCA 72 bp ACAGCCTCAGCCGAAGTAGGCGGGCGGTGGAGGCGCTaGCGCGGCCCCGCTACGTCACAATGCGGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: TASAEVGGRWRR*RGPATSQCGPA
Trigger: GGCCGGGCCGCATTGTGACGTAGCGGGGCCGCGGCAGCGCCTCCACCGCCCGCCTACTTCGGCTGAGGCTGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS TCA 72 bp GGCGCGCCGGCGGCTCAGGAGCGCGAAGGGACTGACTaGCCGACCGACGGACCGCAGCGGCAGGAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: GAPAAQEREGTD*PTDGPQRQEQN
Trigger: GTTCTGCTCCTGCCGCTGCGGTCCGTCGGTCGGTCAGTCAGTCCCTTCGCGCTCCTGAGCCGCCGGCGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000512385.5
ENST00000514497.6
ENST00000542191.5
CDS CCA 72 bp ACCAGCCTGGGACGCAGAACAGCACTAGAGGGAGGCTaGCGGAGCCCGGGCTGGACAGGGCAGTCGGGGAGC +
Preference number: 6 (lower is better)
Translates to: TSLGRRTALEGG*RSPGWTGQSGS
Trigger: GCTCCCCGACTGCCCTGTCCAGCCCGGGCTCCGCCAGCCTCCCTCTAGTGCTGTTCTGCGTCCCAGGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS CCA 72 bp AGGAGCAGAACAGCCTCAGCCGAAGTAGGCGGGCGGTaGAGGCGCTGCCGCGGCCCCGCTACGTCACAATGC +
Preference number: 6 (lower is better)
Translates to: RSRTASAEVGGR*RRCRGPATSQC
Trigger: GCATTGTGACGTAGCGGGGCCGCGGCAGCGCCTCCACCGCCCGCCTACTTCGGCTGAGGCTGTTCTGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512385.5
ENST00000542191.5
CDS CCA 72 bp ACCCAGCGATGTGCTGGGCTCAGAGCTCTTACCTGGTaGGCCGCCCACTCCATCTCCAGGGCCAAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: TQRCAGLRALTW*AAHSISRAKLL
Trigger: CAGGAGCTTGGCCCTGGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS CCA 72 bp TTCACCCAGCGATGTGCTGGGCTCAGAGCTCTTACCTaGTGGGCCGCCCACTCCATCTCCAGGGCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: FTQRCAGLRALT*WAAHSISRAKL
Trigger: GAGCTTGGCCCTGGAGATGGAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS CCA 72 bp CGAGGTCGTAGTGCTCCAGTTCACCCAGCGATGTGCTaGGCTCAGAGCTCTTACCTGGTGGGCCGCCCACTC +
Preference number: 6 (lower is better)
Translates to: RGRSAPVHPAMC*AQSSYLVGRPL
Trigger: GAGTGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAACTGGAGCACTACGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 72 bp TGTCGAGGTCGTAGTGCTCCAGTTCACCCAGCGATGTaGTGGGCTCAGAGCTCTTACCTGGTGGGCCGCCCA +
Preference number: 6 (lower is better)
Translates to: CRGRSAPVHPAM*WAQSSYLVGRP
Trigger: TGGGCGGCCCACCAGGTAAGAGCTCTGAGCCCAGCACATCGCTGGGTGAACTGGAGCACTACGACCTCGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 72 bp AACATGGTGAAACCCTGTCTCAGGGATCCCCCGGCCTaGCCGCCGGCTCCTGTCCACGAACCTGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: NMVKPCLRDPPA*PPAPVHEPALS
Trigger: AGAAAGAGCAGGTTCGTGGACAGGAGCCGGCGGGCAGGCCGGGGGATCCCTGAGACAGGGTTTCACCATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509154.6
CDS GCA 72 bp GCCCCTCCTTATCTCAGCTTTTCCGAGCCGCGGAACTaGCCATCCCTGCCTGCGATAAGATCCCGGGTGACA +
Preference number: 6 (lower is better)
Translates to: APPYLSFSEPRN*PSLPAIRSRVT
Trigger: TGTCACCCGGGATCTTATCGCAGGCAGGGATGGGCAGTTCCGCGGCTCGGAAAAGCTGAGATAAGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS GCA 72 bp TCCCCCGGCCTGCCCGCCGGCTCCTGTCCACGAACCTaGTCTTTCTTTACCTTTCGCTCTTTTTACCTCGAC +
Preference number: 6 (lower is better)
Translates to: SPGLPAGSCPRT*SFFTFRSFYLD
Trigger: GTCGAGGTAAAAAGAGCGAAAGGTAAAGAAAGAGCAGGTTCGTGGACAGGAGCCGGCGGGCAGGCCGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508681.5
CDS CAA 90 bp CCTTGGGAGCTGGTCCGGTTTAGGCCACTGACCTGCTCTTCTGGTTaGGATTCTGCTGCTGAGGATTGTAGGTGGAAGGCCCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PWELVRFRPLTCSSG*DSAAEDCRWKALSW
Trigger: CCAGCTCAGGGCCTTCCACCTACAATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAGCTCCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 72 bp CTTCTGGGCCTTGGGAGCTGGTCCGGTTTAGGCCACTaGCCTGCTCTTCTGGTTTGGATTCTGCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LLGLGSWSGLGH*PALLVWILLLR
Trigger: CCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAGCTCCCAAGGCCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 72 bp GCCAAGAGACAAGGCCAAGAGAGAAACATTCCCCTCTaGAATCCACGCGGACCAGCCTGGGACGCAGAACAG +
Preference number: 6 (lower is better)
Translates to: AKRQGQERNIPL*NPRGPAWDAEQ
Trigger: CTGTTCTGCGTCCCAGGCTGGTCCGCGTGGATTTCAGAGGGGAATGTTTCTCTCTTGGCCTTGTCTCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS GCA 72 bp GGGCCTTGGGAGCTGGTCCGGTTTAGGCCACTGACCTaGTCTTCTGGTTTGGATTCTGCTGCTGAGGATTGT +
Preference number: 6 (lower is better)
Translates to: GPWELVRFRPLT*SSGLDSAAEDC
Trigger: ACAATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAGCTCCCAAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 72 bp CAGCTTTTCCGAGCCGCGGAACTGCCCATCCCTGCCTaGGATAAGATCCCGGGTGACAGCAAGAATAAGAAC +
Preference number: 6 (lower is better)
Translates to: QLFRAAELPIPA*DKIPGDSKNKN
Trigger: GTTCTTATTCTTGCTGTCACCCGGGATCTTATCGCAGGCAGGGATGGGCAGTTCCGCGGCTCGGAAAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS GCA 72 bp GGTCAAATACTTATAAATTCCAGGGATCCCCCGGCCTaGCCGCCGGCTCCTGTCCACGAACCTGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: GQILINSRDPPA*PPAPVHEPALS
Trigger: AGAAAGAGCAGGTTCGTGGACAGGAGCCGGCGGGCAGGCCGGGGGATCCCTGGAATTTATAAGTATTTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508681.5
CDS TCA 72 bp CCTGTGTACCTGTATGCATCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACTGTTGCCATCCTGGTC +
Preference number: 6 (lower is better)
Translates to: PVYLYASKVAML*GYVNGTVAILV
Trigger: GACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGGTACACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS CCA 72 bp GCTCCCAGGGCAGCAACTACTGTCAGTTTGGCCCTATaGGAACCAAAGCCCATTGCATCTTCCCTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: APRAATTVSLAL*EPKPIASSLSV
Trigger: CACAGACAGGGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CAA 72 bp CTGGTCCGGTTTAGGCCACTGACCTGCTCTTCTGGTTaGGATTCTGCTGCTGAGGATTGTAGGTGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: LVRFRPLTCSSG*DSAAEDCRWKA
Trigger: GGCCTTCCACCTACAATCCTCAGCAGCAGAATCCAAACCAGAAGAGCAGGTCAGTGGCCTAAACCGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 72 bp GAGTCTAGTCTGTATGCATCCAAGGTAGCCATGCTGTaGGGCTACGTGAACGGCACTGTTGCCATCCTGGTC +
Preference number: 6 (lower is better)
Translates to: ESSLYASKVAML*GYVNGTVAILV
Trigger: GACCAGGATGGCAACAGTGCCGTTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGACTAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS GCA 72 bp TCATTGAGGCAGTCTTCTCCCATCAAAGAAGTGAGGTaGTGTAGACACTCTGCGTGTCCCTGTGACGCCGCA +
Preference number: 6 (lower is better)
Translates to: SLRQSSPIKEVR*CRHSACPCDAA
Trigger: TGCGGCGTCACAGGGACACGCAGAGTGTCTACAGCACCTCACTTCTTTGATGGGAGAAGACTGCCTCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS CCA 72 bp AATGGCAAGCTCCCAGGGCAGCAACTACTGTCAGTTTaGCCCTATGGGAACCAAAGCCCATTGCATCTTCCC +
Preference number: 6 (lower is better)
Translates to: NGKLPGQQLLSV*PYGNQSPLHLP
Trigger: GGGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CAA 72 bp CAATGGCAAGCTCCCAGGGCAGCAACTACTGTCAGTTaGGCCCTATGGGAACCAAAGCCCATTGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: QWQAPRAATTVS*ALWEPKPIASS
Trigger: GGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CAA 90 bp TTCTCAGGACAATGGCAAGCTCCCAGGGCAGCAACTACTGTCAGTTaGGCCCTATGGGAACCAAAGCCCATTGCATCTTCCCTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: FSGQWQAPRAATTVS*ALWEPKPIASSLSV
Trigger: CACAGACAGGGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGCCATTGTCCTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CCA 72 bp CTCTGGCTGATGTTTCAGTGGCGAAACCCGCTTCACTaGGCGGAACTTACTGTACACATCAGCGATTCCTGT +
Preference number: 6 (lower is better)
Translates to: LWLMFQWRNPLH*AELTVHISDSC
Trigger: ACAGGAATCGCTGATGTGTACAGTAAGTTCCGCCCAGTGAAGCGGGTTTCGCCACTGAAACATCAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000506272.5
ENST00000508681.5
ENST00000509154.6
ENST00000510003.5
ENST00000514467.5
CDS CCA 72 bp TCTGCTGCTGAGGATTGTAGGTGGAAGGCCCTGAGCTaGCAGTCTGGTGTTGTCTTCTCAACTTTTCGACCA +
Preference number: 6 (lower is better)
Translates to: SAAEDCRWKALS*QSGVVFSTFRP
Trigger: TGGTCGAAAAGTTGAGAAGACAACACCAGACTGCCAGCTCAGGGCCTTCCACCTACAATCCTCAGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS CCA 72 bp GCACTCCAACTGACCATTCTTAATGGCCAGGCCTGCTaGAGTCAACTTCTCAGTGTTGCGCTCATTGAGGCA +
Preference number: 6 (lower is better)
Translates to: ALQLTILNGQAC*SQLLSVALIEA
Trigger: TGCCTCAATGAGCGCAACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAGAATGGTCAGTTGGAGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS CAA 72 bp AGGCCTGCTGGAGTCAACTTCTCAGTGTTGCGCTCATaGAGGCAGTCTTCTCCCATCAAAGAAGTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: RPAGVNFSVLRS*RQSSPIKEVRC
Trigger: GCACCTCACTTCTTTGATGGGAGAAGACTGCCTCAATGAGCGCAACACTGAGAAGTTGACTCCAGCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS CAA 90 bp GTTGGATGGCCCCACCTTAGACTAAGGCTCCTAGGCATCTGGAATTaGCCTCTACTTCCCAGCAGGCCTCCACATGCTATCTCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: VGWPHLRLRLLGIWN*PLLPSRPPHAISFK
Trigger: CTTAAAGGAGATAGCATGTGGAGGCCTGCTGGGAAGTAGAGGCAAATTCCAGATGCCTAGGAGCCTTAGTCTAAGGTGGGGCCATCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CAA 90 bp GGGCAGCAACTACTGTCAGTTTGGCCCTATGGGAACCAAAGCCCATaGCATCTTCCCTGTCTGTGTCCTCCAATCCAAGCTTTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: GQQLLSVWPYGNQSP*HLPCLCPPIQAFVA
Trigger: GGCTACAAAAGCTTGGATTGGAGGACACAGACAGGGAAGATGCAATGGGCTTTGGTTCCCATAGGGCCAAACTGACAGTAGTTGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000514497.6
ENST00000542191.5
CDS CAA 90 bp TTAATGGCCAGGCCTGCTGGAGTCAACTTCTCAGTGTTGCGCTCATaGAGGCAGTCTTCTCCCATCAAAGAAGTGAGGTGCTGTAGACAC +
Preference number: 6 (lower is better)
Translates to: LMARPAGVNFSVLRS*RQSSPIKEVRCCRH
Trigger: GTGTCTACAGCACCTCACTTCTTTGATGGGAGAAGACTGCCTCAATGAGCGCAACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS TCA 72 bp TTCAGTGGACAGCTTGTGCTGGTCGTGGATGACAGCTaGTGCTTTTCTCAAGTGAGGGCTTTTCACGGGAGA +
Preference number: 6 (lower is better)
Translates to: FSGQLVLVVDDS*CFSQVRAFHGR
Trigger: TCTCCCGTGAAAAGCCCTCACTTGAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 72 bp TCTGGGAGGGCTTTTCCCCAGCGTGGTTCTGCATGGTaGCATTTGCTCCATATTCAACCAAGGTCTGTCAGA +
Preference number: 6 (lower is better)
Translates to: SGRAFPQRGSAW*HLLHIQPRSVR
Trigger: TCTGACAGACCTTGGTTGAATATGGAGCAAATGTCACCATGCAGAACCACGCTGGGGAAAAGCCCTCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS GCA 72 bp GGAGGTGAGATCTCGGTTTCTTCAGTGGACAGCTTGTaGTGGTCGTGGATGACAGCTGATGCTTTTCTCAAG +
Preference number: 6 (lower is better)
Translates to: GGEISVSSVDSL*WSWMTADAFLK
Trigger: CTTGAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGATCTCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 72 bp TACGCACTCCAACTGACCATTCTTAATGGCCAGGCCTaGTGGAGTCAACTTCTCAGTGTTGCGCTCATTGAG +
Preference number: 6 (lower is better)
Translates to: YALQLTILNGQA*WSQLLSVALIE
Trigger: CTCAATGAGCGCAACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAAGAATGGTCAGTTGGAGTGCGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS CAA 72 bp AGAGGAGGTGAGATCTCGGTTTCTTCAGTGGACAGCTaGTGCTGGTCGTGGATGACAGCTGATGCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: RGGEISVSSVDS*CWSWMTADAFL
Trigger: GAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACTGAAGAAACCGAGATCTCACCTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS CAA 90 bp TCCCCAACATTAACTGCTTCTTTACAGGTAAGAGTGAGTCTGCAGTaGTCCCAGTGGCCAATACAATGCCTCCTCTTCTCTCGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: SPTLTASLQVRVSLQ*SQWPIQCLLFSRLP
Trigger: GGGCAGACGAGAGAAGAGGAGGCATTGTATTGGCCACTGGGACAACTGCAGACTCACTCTTACCTGTAAAGAAGCAGTTAATGTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CAA 90 bp GCTGTCCATAGTGTGCTCTCCTTTATGAGATATGCAGTGCAGTCTTaGTGGTGGGGAGTTCTGTCTCTTGTCATGGTTGGGCTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: AVHSVLSFMRYAVQS*WWGVLSLVMVGLQE
Trigger: CTCTTGGAGCCCAACCATGACAAGAGACAGAACTCCCCACCACAAAGACTGCACTGCATATCTCATAAAGGAGAGCACACTATGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS TCA 72 bp CGGTTTCTTCAGTGGACAGCTTGTGCTGGTCGTGGATaGCAGCTGATGCTTTTCTCAAGTGAGGGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: RFLQWTACAGRG*QLMLFSSEGFS
Trigger: TGAAAAGCCCTCACTTGAGAAAAGCATCAGCTGTCATCCACGACCAGCACAAGCTGTCCACTGAAGAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS TCA 72 bp AGGCTCATATGCAGAGCCACATTTAACCAGAGGAGGTaGGATCTCGGTTTCTTCAGTGGACAGCTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: RLICRATFNQRR*DLGFFSGQLVL
Trigger: CAGCACAAGCTGTCCACTGAAGAAACCGAGATCTCACCTCCTCTGGTTAAATGTGGCTCTGCATATGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 72 bp CGCACTCCAACTGACCATTCTGATCTGTCTTCGTTTTaGGTATCACATCTTCGGCACAGTTCTGGGATCGTC +
Preference number: 6 (lower is better)
Translates to: RTPTDHSDLSSF*VSHLRHSSGIV
Trigger: GACGATCCCAGAACTGTGCCGAAGATGTGATACGCAAAACGAAGACAGATCAGAATGGTCAGTTGGAGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508017.5
ENST00000510658.5
ENST00000512146.6
ENST00000512385.5
ENST00000515215.6
ENST00000542191.5
CDS GCA 72 bp TTCTCATTGCAAAACAGCAGGGCCTGTGTACCTGTATaGATCCAAGGTAGCCATGCTGTGAGGCTACGTGAA +
Preference number: 6 (lower is better)
Translates to: FSLQNSRACVPV*IQGSHAVRLRE
Trigger: TTCACGTAGCCTCACAGCATGGCTACCTTGGATGCATACAGGTACACAGGCCCTGCTGTTTTGCAATGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS CCA 72 bp GTGCTCTCCTTTATGAGATATGCAGTGCAGTCTTTGTaGTGGGGAGTTCTGTCTCTTGTCATGGTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: VLSFMRYAVQSL*WGVLSLVMVGL
Trigger: GAGCCCAACCATGACAAGAGACAGAACTCCCCACCACAAAGACTGCACTGCATATCTCATAAAGGAGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS CAA 72 bp TTAATGGCCAGGCCTGCTGGAGTCAACTTCTCAGTGTaGCGCTCATTGAGGCAGTCTTCTCCCATCAAAGAA +
Preference number: 6 (lower is better)
Translates to: LMARPAGVNFSV*RSLRQSSPIKE
Trigger: TTCTTTGATGGGAGAAGACTGCCTCAATGAGCGCAACACTGAGAAGTTGACTCCAGCAGGCCTGGCCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395466.6
ENST00000395469.6
ENST00000510003.5
CDS CAA 90 bp TGCTGCGCCAACCTGATCAGGAATAAAAAGAACTCCTTCTTGTCCTaGACACTGCAGCCCAGAAGAGATAGGGGGATAGGAGCTAAAGTG +
Preference number: 6 (lower is better)
Translates to: CCANLIRNKKNSFLS*TLQPRRDRGIGAKV
Trigger: CACTTTAGCTCCTATCCCCCTATCTCTTCTGGGCTGCAGTGTCAAGGACAAGAAGGAGTTCTTTTTATTCCTGATCAGGTTGGCGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CCA 72 bp CTCTCCTTTATGAGATATGCAGTGCAGTCTTTGTGGTaGGGAGTTCTGTCTCTTGTCATGGTTGGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: LSFMRYAVQSLW*GVLSLVMVGLQ
Trigger: TTGGAGCCCAACCATGACAAGAGACAGAACTCCCCACCACAAAGACTGCACTGCATATCTCATAAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS CAA 72 bp AGTGTGCTCTCCTTTATGAGATATGCAGTGCAGTCTTaGTGGTGGGGAGTTCTGTCTCTTGTCATGGTTGGG +
Preference number: 6 (lower is better)
Translates to: SVLSFMRYAVQS*WWGVLSLVMVG
Trigger: CCCAACCATGACAAGAGACAGAACTCCCCACCACAAAGACTGCACTGCATATCTCATAAAGGAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513719.1
CDS CAA 90 bp ATTTGTTGCTGCGCCAACCTGATCAGGAATAAAAAGAACTCCTTCTaGTCCTTGACACTGCAGCCCAGAAGAGATAGGGGGATAGGAGCT +
Preference number: 6 (lower is better)
Translates to: ICCCANLIRNKKNSF*SLTLQPRRDRGIGA
Trigger: AGCTCCTATCCCCCTATCTCTTCTGGGCTGCAGTGTCAAGGACAAGAAGGAGTTCTTTTTATTCCTGATCAGGTTGGCGCAGCAACAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CAA 90 bp CACTTGAGAGACAGATGTCTGCCTGGTAGTGGTTTCTCTGGTGCCTaGAGAACATGGGGAAATTTAATGTCTATTGTCCTCAGCACTGGG +
Preference number: 6 (lower is better)
Translates to: HLRDRCLPGSGFSGA*RTWGNLMSIVLSTG
Trigger: CCCAGTGCTGAGGACAATAGACATTAAATTTCCCCATGTTCTCAAGGCACCAGAGAAACCACTACCAGGCAGACATCTGTCTCTCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS CAA 90 bp ATACTTATAAATTCCGTGATCCAAGCGTTAACCGCTGCCATCTCATaGGTCCCCAGACCATTCCAGGGTTCCAGCATAAACTGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: ILINSVIQALTAAIS*VPRPFQGSSINWEK
Trigger: CTTCTCCCAGTTTATGCTGGAACCCTGGAATGGTCTGGGGACCAATGAGATGGCAGCGGTTAACGCTTGGATCACGGAATTTATAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514467.5
CDS CAA 90 bp GCCATGTTGGATGATGAGCTCTCAGAACTTCCTGTAGAGCAGGCTTaGCCAGAAAGGCCATTGATGGTTGTGCATAAGCCCAAAATTCTT +
Preference number: 6 (lower is better)
Translates to: AMLDDELSELPVEQA*PERPLMVVHKPKIL
Trigger: AAGAATTTTGGGCTTATGCACAACCATCAATGGCCTTTCTGGCAAAGCCTGCTCTACAGGAAGTTCTGAGAGCTCATCATCCAACATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS GCA 72 bp AATACTTATAAATTCCGTGATCCAAGCGTTAACCGCTaGCATCTCATTGGTCCCCAGACCATTCCAGGGTTC +
Preference number: 6 (lower is better)
Translates to: NTYKFRDPSVNR*HLIGPQTIPGF
Trigger: GAACCCTGGAATGGTCTGGGGACCAATGAGATGGCAGCGGTTAACGCTTGGATCACGGAATTTATAAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514467.5
CDS CCA 72 bp TTGAGTGATGTGACTGAATACTCATTCTCAGGACAATaGCAAGCTCCCAGGGCAGCAACTACTGTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: LSDVTEYSFSGQ*QAPRAATTVSL
Trigger: CAAACTGACAGTAGTTGCTGCCCTGGGAGCTTGCCATTGTCCTGAGAATGAGTATTCAGTCACATCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000542191.5
CDS CAA 90 bp AAAGTGGTGTGTAAAAAGGCATGTCTCACTCCCATTCCAAGTCCCTaGAATCTTGAGTCTAGTCTGTATGCATCCAAGGTAGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: KVVCKKACLTPIPSP*NLESSLYASKVAML
Trigger: CAGCATGGCTACCTTGGATGCATACAGACTAGACTCAAGATTCAAGGGACTTGGAATGGGAGTGAGACATGCCTTTTTACACACCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CAA 90 bp GCGGCAGCAACACCAGACGTCCCTTTTCTACAGCTATTATTACCGTaGTTAGTACTGTCGCTATTACTATTACTTCGCCCCTCCTTATCT +
Preference number: 6 (lower is better)
Translates to: AAATPDVPFLQLLLP*LVLSLLLLLRPSLS
Trigger: AGATAAGGAGGGGCGAAGTAATAGTAATAGCGACAGTACTAACAACGGTAATAATAGCTGTAGAAAAGGGACGTCTGGTGTTGCTGCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS CCA 72 bp GTGAACAACACACAGATGATGCTGGGTGCCAGGATATaGTATAAACATCAGCAGGAACATGGAAATATGGGG +
Preference number: 6 (lower is better)
Translates to: VNNTQMMLGARI*YKHQQEHGNMG
Trigger: CCCCATATTTCCATGTTCCTGCTGATGTTTATACCATATCCTGGCACCCAGCATCATCTGTGTGTTGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CAA 72 bp TGCGTATCACATCTTCGGCACAGTTCTGGGATCGTCTaGAGTGATGTGACTGAATACTCATTCTCAGGACAA +
Preference number: 6 (lower is better)
Translates to: CVSHLRHSSGIV*SDVTEYSFSGQ
Trigger: TTGTCCTGAGAATGAGTATTCAGTCACATCACTCAAGACGATCCCAGAACTGTGCCGAAGATGTGATACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000395469.6
ENST00000506272.5
ENST00000512146.6
ENST00000542191.5
CDS CAA 72 bp CTTTTCACGGGAGAAAGAACACAAAATGGTGCCATGTaGGATGATGAGCTCTCAGAACTTCCTGTAGAGCAG +
Preference number: 6 (lower is better)
Translates to: LFTGERTQNGAM*DDELSELPVEQ
Trigger: CTGCTCTACAGGAAGTTCTGAGAGCTCATCATCCAACATGGCACCATTTTGTGTTCTTTCTCCCGTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS CAA 72 bp AACCTGATCAGGAATAAAAAGAACTCCTTCTTGTCCTaGACACTGCAGCCCAGAAGAGATAGGGGGATAGGA +
Preference number: 6 (lower is better)
Translates to: NLIRNKKNSFLS*TLQPRRDRGIG
Trigger: TCCTATCCCCCTATCTCTTCTGGGCTGCAGTGTCAAGGACAAGAAGGAGTTCTTTTTATTCCTGATCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CCA 72 bp AACATGGGGAAATTTAATGTCTATTGTCCTCAGCACTaGGGCTTTAGAGCAGTGATAAGGGAGCAGGAAAAG +
Preference number: 6 (lower is better)
Translates to: NMGKFNVYCPQH*GFRAVIREQEK
Trigger: CTTTTCCTGCTCCCTTATCACTGCTCTAAAGCCCCAGTGCTGAGGACAATAGACATTAAATTTCCCCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS GCA 72 bp GGTTTTCCAATCCTGACTACATTCCCCAACATTAACTaGTTCTTTACAGGTAAGAGTGAGTCTGCAGTTGTC +
Preference number: 6 (lower is better)
Translates to: GFPILTTFPNIN*FFTGKSESAVV
Trigger: GACAACTGCAGACTCACTCTTACCTGTAAAGAAGCAGTTAATGTTGGGGAATGTAGTCAGGATTGGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CAA 72 bp ACACCAGACGTCCCTTTTCTACAGCTATTATTACCGTaGTTAGTACTGTCGCTATTACTATTACTTCGCCCC +
Preference number: 6 (lower is better)
Translates to: TPDVPFLQLLLP*LVLSLLLLLRP
Trigger: GGGGCGAAGTAATAGTAATAGCGACAGTACTAACAACGGTAATAATAGCTGTAGAAAAGGGACGTCTGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509652.1
CDS GCA 72 bp AACTTACTGTACACATCAGCGATTCCTGTGGGCTTTTaGGTGTTTGTAATAAGAGTTGAGATGCCACAATTC +
Preference number: 6 (lower is better)
Translates to: NLLYTSAIPVGF*VFVIRVEMPQF
Trigger: GAATTGTGGCATCTCAACTCTTATTACAAACACGCAAAAGCCCACAGGAATCGCTGATGTGTACAGTAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000506272.5
ENST00000508681.5
ENST00000509154.6
ENST00000510003.5
ENST00000514467.5
CDS CCA 72 bp GTGATAAGGGAGCAGGAAAAGTCCCTTTCAACACCCTaGGACACTGAAAGAGAAACTCTTATGGATATTTAT +
Preference number: 6 (lower is better)
Translates to: VIREQEKSLSTP*DTERETLMDIY
Trigger: ATAAATATCCATAAGAGTTTCTCTTTCAGTGTCCCAGGGTGTTGAAAGGGACTTTTCCTGCTCCCTTATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS CAA 72 bp TTGAGGTGCTCCAACAATATAGACAGCAATATCCAGTaGAGTGTAGCCATTCCAATAGAATATAACCAGCGG +
Preference number: 6 (lower is better)
Translates to: LRCSNNIDSNIQ*SVAIPIEYNQR
Trigger: CCGCTGGTTATATTCTATTGGAATGGCTACACTCAACTGGATATTGCTGTCTATATTGTTGGAGCACCTCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CAA 90 bp CACCCCTGTTTGAGGTGCTCCAACAATATAGACAGCAATATCCAGTaGAGTGTAGCCATTCCAATAGAATATAACCAGCGGATAATAACT +
Preference number: 6 (lower is better)
Translates to: HPCLRCSNNIDSNIQ*SVAIPIEYNQRIIT
Trigger: AGTTATTATCCGCTGGTTATATTCTATTGGAATGGCTACACTCAACTGGATATTGCTGTCTATATTGTTGGAGCACCTCAAACAGGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CAA 90 bp CCAATCCAATTTCTTTTCATGAAATCTGTACTCCGTGATGAACTATaGATTTACAGACTCTGTTCCCACGGCCTTGGTGAACAACACACA +
Preference number: 6 (lower is better)
Translates to: PIQFLFMKSVLRDEL*IYRLCSHGLGEQHT
Trigger: TGTGTGTTGTTCACCAAGGCCGTGGGAACAGAGTCTGTAAATCAATAGTTCATCACGGAGTACAGATTTCATGAAAAGAAATTGGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS TCA 72 bp TGGCAGTCTGGTGTTGTCTTCTCAACTTTTCGACCATaGGGATCACTAAATGTCTTGTTTAGGAAGTCTTTA +
Preference number: 6 (lower is better)
Translates to: WQSGVVFSTFRP*GSLNVLFRKSL
Trigger: TAAAGACTTCCTAAACAAGACATTTAGTGATCCTCATGGTCGAAAAGTTGAGAAGACAACACCAGACTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261367.11
ENST00000261368.13
ENST00000395469.6
ENST00000509154.6
ENST00000510003.5
CDS CCA 72 bp CCAAGGTCTGTTCTCATTTGCTTGGGCTCTAGTAACTaGATTTGGTCTCTGGTAATTGGTTTTGAAATAACA +
Preference number: 6 (lower is better)
Translates to: PRSVLICLGSSN*IWSLVIGFEIT
Trigger: TGTTATTTCAAAACCAATTACCAGAGACCAAATCCAGTTACTAGAGCCCAAGCAAATGAGAACAGACCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395469.6
CDS CAA 72 bp TTTCTTTTCATGAAATCTGTACTCCGTGATGAACTATaGATTTACAGACTCTGTTCCCACGGCCTTGGTGAA +
Preference number: 6 (lower is better)
Translates to: FLFMKSVLRDEL*IYRLCSHGLGE
Trigger: TTCACCAAGGCCGTGGGAACAGAGTCTGTAAATCAATAGTTCATCACGGAGTACAGATTTCATGAAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS CCA 72 bp TTTCAACACCCTGGGACACTGAAAGAGAAACTCTTATaGATATTTATGCCTACCTACATTTGTGTGGATTTC +
Preference number: 6 (lower is better)
Translates to: FQHPGTLKEKLL*IFMPTYICVDF
Trigger: GAAATCCACACAAATGTAGGTAGGCATAAATATCCATAAGAGTTTCTCTTTCAGTGTCCCAGGGTGTTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510003.5
CDS TCA 72 bp CTTGGAAATTACTCAAAACAACATTCTCTCCTACTGTaGTGGATTCTGATACAATCCAGACTCTTTGGATAC +
Preference number: 6 (lower is better)
Translates to: LGNYSKQHSLLL*WILIQSRLFGY
Trigger: GTATCCAAAGAGTCTGGATTGTATCAGAATCCATCACAGTAGGAGAGAATGTTGTTTTGAGTAATTTCCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261367.11
CDS GCA 72 bp AATAACTCATGGCATCACAACAGGAATCTTTCAATTTaGACTTGCAGGATGGTAGTGAGGTTCTTTATTCTA +
Preference number: 6 (lower is better)
Translates to: NNSWHHNRNLSI*TCRMVVRFFIL
Trigger: TAGAATAAAGAACCTCACTACCATCCTGCAAGTGCAAATTGAAAGATTCCTGTTGTGATGCCATGAGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261367.11