Pregenerated sensors for SNAPIN (Homo sapiens)
Ensembl gene IDs: ENSG00000143553Ensembl transcript IDs: ENST00000368685.6, ENST00000462880.1, ENST00000474959.5, ENST00000478558.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGCCCATGTAACCAGGCATGTAACATACAAAGGAAGCCCCTCTaGTTAACTAGTCCTGAAGAAGGTAAGCCTCACGTATGCAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: PGPCNQACNIQRKPL*LTSPEEGKPHVCSL Trigger: TAAGCTGCATACGTGAGGCTTACCTTCTTCAGGACTAGTTAACCAGAGGGGCTTCCTTTGTATGTTACATGCCTGGTTACATGGGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR CCA 90 bp | ACCTCATTCTGGCTGTGTGTAGGTTTCCTGGGGCCCCTACATAAATaGGTAAGACGAAGTGCTTCAAACAAACTGTACGGCTCCCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: TSFWLCVGFLGPLHK*VRRSASNKLYGSLF Trigger: AAAAAGGGAGCCGTACAGTTTGTTTGAAGCACTTCGTCTTACCCATTTATGTAGGGGCCCCAGGAAACCTACACACAGCCAGAATGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR CCA 90 bp | CTTCAAACAAACTGTACGGCTCCCTTTTTAATGTCTGAAGGTCTATaGGGACTGTCTCCTAGGATCTTTGCATGTCTGTTGAAACAAGGC | + |
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Preference number: 1 (lower is better) Translates to: LQTNCTAPFLMSEGL*GLSPRIFACLLKQG Trigger: GCCTTGTTTCAACAGACATGCAAAGATCCTAGGAGACAGTCCCCATAGACCTTCAGACATTAAAAAGGGAGCCGTACAGTTTGTTTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR-3UTR GCA 90 bp | GGACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACATACAAAGGAAGCCCCATGGGTAAGACGAAGTaGTTCAAACAAACTGTACGG | + |
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Preference number: 2 (lower is better) Translates to: GHAVQAHVTRHVTYKGSPMGKTK*FKQTVR Trigger: CCGTACAGTTTGTTTGAAGCACTTCGTCTTACCCAT...GGGGCTTCCTTTGTATGTTACATGCCTGGTTACATGGGCCTGGACAGCATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTGTAGGTTTCCTGGGGCCCCTACATAAATGGGTAAGACGAAGTGCTTCAATGTCTGAAGGTCTATaGGGACTGTCTCCTAGGATC | + |
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Preference number: 2 (lower is better) Translates to: LCVGFLGPLHKWVRRSASMSEGL*GLSPRI Trigger: GATCCTAGGAGACAGTCCCCATAGACCTTCAGACAT...TGAAGCACTTCGTCTTACCCATTTATGTAGGGGCCCCAGGAAACCTACACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR-3UTR CCA 90 bp | TGTAACCAGGCATGTAACATACAAAGGAAGCCCCTCTGGTTAACTAGTCCTGAAGGGCCCCTACATAAATaGGTAAGACGAAGTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CNQACNIQRKPLWLTSPEGPLHK*VRRSAS Trigger: TGAAGCACTTCGTCTTACCCATTTATGTAGGGGCCC...TTCAGGACTAGTTAACCAGAGGGGCTTCCTTTGTATGTTACATGCCTGGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR-3UTR TCA 90 bp | ATAATTAATGTAAGTCCTTTGGGAACCTCATTCTGGCTGTGTGTAGGTTTCCTGTCTTTGCATGTCTGTTaGAACAAGGCAGCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: IINVSPLGTSFWLCVGFLSLHVC*NKAAGE Trigger: TTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGA...CAGGAAACCTACACACAGCCAGAATGAGGTTCCCAAAGGACTTACATTAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR-3UTR CCA 90 bp | ATAATTAATGTAAGTCCTTTGGGAACCTCATTCTGGCTGTGTGTAGGTTTCCTGTTGAAACAAGGCAGCTaGGGAACAGTACTTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: IINVSPLGTSFWLCVGFLLKQGS*GTVLVL Trigger: TAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAA...CAGGAAACCTACACACAGCCAGAATGAGGTTCCCAAAGGACTTACATTAATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR CCA 72 bp | TGGCTGTGTGTAGGTTTCCTGGGGCCCCTACATAAATaGGTAAGACGAAGTGCTTCAAACAAACTGTACGGC | + |
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Preference number: 3 (lower is better) Translates to: WLCVGFLGPLHK*VRRSASNKLYG Trigger: GCCGTACAGTTTGTTTGAAGCACTTCGTCTTACCCATTTATGTAGGGGCCCCAGGAAACCTACACACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR CCA 72 bp | AACTGTACGGCTCCCTTTTTAATGTCTGAAGGTCTATaGGGACTGTCTCCTAGGATCTTTGCATGTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: NCTAPFLMSEGL*GLSPRIFACLL Trigger: CAACAGACATGCAAAGATCCTAGGAGACAGTCCCCATAGACCTTCAGACATTAAAAAGGGAGCCGTACAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| 3UTR CCA 72 bp | TGTAACCAGGCATGTAACATACAAAGGAAGCCCCTCTaGTTAACTAGTCCTGAAGAAGGTAAGCCTCACGTA | + |
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Preference number: 3 (lower is better) Translates to: CNQACNIQRKPL*LTSPEEGKPHV Trigger: TACGTGAGGCTTACCTTCTTCAGGACTAGTTAACCAGAGGGGCTTCCTTTGTATGTTACATGCCTGGTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | GAAGTCACAGGTAGAGGACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACAAAAGGTCGCGGCCTGTaGGCCCCGCCACCGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EVTGRGHAVQAHVTRHVTKGRGL*APPPGS Trigger: GGACCCCGGTGGCGGGGCCCACAGGCCGCGACCTTT...TGTTACATGCCTGGTTACATGGGCCTGGACAGCATGTCCTCTACCTGTGACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR GCA 90 bp | GAAGTGCTTCAAACAAACTGTACGGCTCCCTTTTTAATGTCTGAAGGTCTATGGCGCCACCGGGGTCCCTaGCCCCGATACAGCGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: EVLQTNCTAPFLMSEGLWRHRGP*PRYSGG Trigger: TCCGCCGCTGTATCGGGGGCAGGGACCCCGGTGGCG...CCATAGACCTTCAGACATTAAAAAGGGAGCCGTACAGTTTGTTTGAAGCACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR TCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCCTGACGGCGTGTACGTaGGAGTCGAGCTGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESLTACT*ESSCCT Trigger: TGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAG...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCATAGGCTCATCTTCCCGGAGCTCTACCTaGCTCTCTCTGACGGCGTGT | + |
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Preference number: 4 (lower is better) Translates to: ETRQLGNSTCATESIGSSSRSST*LSLTAC Trigger: ACACGCCGTCAGAGAGAGCCAGGTAGAGCTCCGGGA...AGATGAGCCTATGGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR TCA 90 bp | AGGATCTTTGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACATCACGAATTGTCCTaGAGCCCGAAACCTGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: RIFACLLKQGSWGTVLVLHHELS*SPKPAA Trigger: CGCGGCAGGTTTCGGGCTTCAGGACAATTCGTGATG...TAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | GAAGTCACAGGTAGAGGACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACATCCTTGGCAACACTGTaGTTTAGCCGTCTCAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: EVTGRGHAVQAHVTRHVTSLATL*FSRLSR Trigger: ACGACTGAGACGGCTAAACCACAGTGTTGCCAAGGA...TGTTACATGCCTGGTTACATGGGCCTGGACAGCATGTCCTCTACCTGTGACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCTGCGGGCTGTTTCCTTaGCAACACTGTGGTTTAGCC | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESCGLFP*QHCGLA Trigger: GGCTAAACCACAGTGTTGCCAAGGAAACAGCCCGCA...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR TCA 90 bp | AGGATCTTTGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTATCCAGGGCCACCTTCTaGTCCTCATTTATGCGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RIFACLLKQGSWGTVLVLSRATF*SSFMRH Trigger: GTGCCGCATAAATGAGGATCAGAAGGTGGCCCTGGA...TAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR TCA 90 bp | ACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACATACAAAGGAAGCCCCTCTCTTTGCATGTCTGTTaGAACAAGGCAGCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TCCPGPCNQACNIQRKPLSLHVC*NKAAGE Trigger: TTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGA...GAGGGGCTTCCTTTGTATGTTACATGCCTGGTTACATGGGCCTGGACAGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR GCA 90 bp | AGGATCTTTGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTATCCCGAATCCAGCATTaGTCTCCTGCGGGCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RIFACLLKQGSWGTVLVLSRIQH*SPAGCF Trigger: GAAACAGCCCGCAGGAGAGCAATGCTGGATTCGGGA...TAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | GGACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACATACAAAGGAAGCCCCTGCGGCACAGTTCTGTaGCTAGGTTGTCAATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: GHAVQAHVTRHVTYKGSPCGTVL*LGCQFV Trigger: AACAAATTGACAACCTAGCCACAGAACTGTGCCGCA...GGGGCTTCCTTTGTATGTTACATGCCTGGTTACATGGGCCTGGACAGCATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR TCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCCAGTACTTGTGCTACTaGGTCCATAGGCTCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESQYLCY*VHRLIC Trigger: ACAGATGAGCCTATGGACTCAGTAGCACAAGTACTG...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR GCA 90 bp | AGGATCTTTGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACACTTTGACTTTGCCTaGCCCCTCCAAATCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RIFACLLKQGSWGTVLVLHFDFA*PLQIPS Trigger: ACTGGGGATTTGGAGGGGGCAGGCAAAGTCAAAGTG...TAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCGGGCCCCTACATAAATaGGTAAGACGAAGTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESGPLHK*VRRSAS Trigger: TGAAGCACTTCGTCTTACCCATTTATGTAGGGGCCC...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR TCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCTCCCTTTTTAATGTCTaGAGGTCTATGGGGACTGTC | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESSLFNV*RSMGTV Trigger: GACAGTCCCCATAGACCTTCAGACATTAAAAAGGGA...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCTTGAAACAAGGCAGCTaGGGAACAGTACTTGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESLKQGS*GTVLVL Trigger: TAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAA...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | GAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCATAGGCTCATCTCAAAGGAAGCCCCTCTaGTTAACTAGTCCTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ETRQLGNSTCATESIGSSQRKPL*LTSPEE Trigger: TTCTTCAGGACTAGTTAACCAGAGGGGCTTCCTTTG...AGATGAGCCTATGGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR GCA 90 bp | TGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCATGGGTAAGACGAAGTaGTTCAAACAAACTGTACGG | + |
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Preference number: 4 (lower is better) Translates to: CMSVETRQLGNSTCATESMGKTK*FKQTVR Trigger: CCGTACAGTTTGTTTGAAGCACTTCGTCTTACCCAT...GGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR CCA 90 bp | ATAATTAATGTAAGTCCTTTGGGAACCTCATTCTGGCTGTGTGTAGGTTTCCTGTTGGGAACCTCATTCTaGCTGTGTGTAGGTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: IINVSPLGTSFWLCVGFLLGTSF*LCVGFL Trigger: CAGGAAACCTACACACAGCCAGAATGAGGTTCCCAA...CAGGAAACCTACACACAGCCAGAATGAGGTTCCCAAAGGACTTACATTAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS-3UTR GCA 90 bp | ATAATTAATGTAAGTCCTTTGGGAACCTCATTCTGGCTGTGTGTAGGTTTCCTGTCTGATCCTCATTTATaGGGCACAGTTCTGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: IINVSPLGTSFWLCVGFLSDPHL*GTVLWL Trigger: TAGCCACAGAACTGTGCCGCATAAATGAGGATCAGA...CAGGAAACCTACACACAGCCAGAATGAGGTTCCCAAAGGACTTACATTAATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS TCA 90 bp | GGCCCCGCCCCCAACTTCCCTCCCGGGCACCTGACGGCGTGTACGTaGGAGTCGAGCTGCTGCACAGCGGGTCGCAGGAACTCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GPAPNFPPGHLTACT*ESSCCTAGRRNSSS Trigger: GCTGCTGGAGTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGGTGCCCGGGAGGGAAGTTGGGGGCGGGGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS TCA 90 bp | AAGCCAGAGAGACAGGCCCCGCCCCCAACTTCCCTCCCGGGCACCTaGCGGCGTGTACGTGAGAGTCGAGCTGCTGCACAGCGGGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: KPERQAPPPTSLPGT*RRVRESRAAAQRVA Trigger: TGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGGTGCCCGGGAGGGAAGTTGGGGGCGGGGCCTGTCTCTCTGGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS TCA 90 bp | TACCGGAGCTCAGGAAACGAACTCCCCTACGTATTTACCAAGTACTaGGAGAAGCCGGCCTCCGCTGAACCCTCCACCTGCGGCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: YRSSGNELPYVFTKY*EKPASAEPSTCGLP Trigger: GGGAAGGCCGCAGGTGGAGGGTTCAGCGGAGGCCGGCTTCTCTCAGTACTTGGTAAATACGTAGGGGAGTTCGTTTCCTGAGCTCCGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS CCA 90 bp | AGTGGGCTGAAGAATTCCGGGTACACAGGGATGCTCACTCACCTGTaGCTAGGTTGTCAATTTGTTCCCGGAGCTCTACCTGGCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SGLKNSGYTGMLTHL*LGCQFVPGALPGSL Trigger: GAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCACAGGTGAGTGAGCATCCCTGTGTACCCGGAATTCTTCAGCCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS-3UTR CAA 90 bp | GGACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACATACAAAGGAAGCCCCCAGAGGTCATTCACTTaGACTTTGCCTGCCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GHAVQAHVTRHVTYKGSPQRSFT*TLPAPS Trigger: GGAGGGGGCAGGCAAAGTCAAAGTGAATGACCTCTG...GGGGCTTCCTTTGTATGTTACATGCCTGGTTACATGGGCCTGGACAGCATGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS TCA 90 bp | CTTGCACCCAAACGGGCCACAGCCATTAGAGATTTAAGACATCCCTaGAAGGAGGAGTCCTTTGGCAGCCCTGATGCCCTGGAAGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LAPKRATAIRDLRHP*KEESFGSPDALEAS Trigger: ACTTGCTTCCAGGGCATCAGGGCTGCCAAAGGACTCCTCCTTTCAGGGATGTCTTAAATCTCTAATGGCTGTGGCCCGTTTGGGTGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS CCA 90 bp | CACTCACCTGTGGCTAGGTTGTCAATTTGTTCCCGGAGCTCTACCTaGCTCTCTCTGCAAAGAGGTACAAGGCCTACAAGGTCAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HSPVARLSICSRSST*LSLQRGTRPTRSGS Trigger: ACTGCCTGACCTTGTAGGCCTTGTACCTCTTTGCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCACAGGTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS CCA 90 bp | GGTAAATTCCCGAATCCAGCATTGCTCTCCTGCGGGCTGTTTCCTTaGCAACACTGTGGTTTAGCCGTCTCAGTCGTTCCTGAGCATTCT | + |
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Preference number: 5 (lower is better) Translates to: GKFPNPALLSCGLFP*QHCGLAVSVVPEHS Trigger: AGAATGCTCAGGAACGACTGAGACGGCTAAACCACAGTGTTGCCAAGGAAACAGCCCGCAGGAGAGCAATGCTGGATTCGGGAATTTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368685.6 ENST00000462880.1 ENST00000478558.1 |
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| CDS CCA 90 bp | CACAGTTCTGTGGCTAGGTTGTCAATTTGTTCCCGGAGCTCTACCTaGCTCTCTCTGCAAAGAGGTACAAGGCCTACAAGGTCAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HSSVARLSICSRSST*LSLQRGTRPTRSGS Trigger: ACTGCCTGACCTTGTAGGCCTTGTACCTCTTTGCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCACAGAACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474959.5 |
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| CDS-3UTR CAA 90 bp | GGACATGCTGTCCAGGCCCATGTAACCAGGCATGTAACATACAAAGGAAGCCCCATTAATGTAAGTCCTTaGGGAACCTCATTCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GHAVQAHVTRHVTYKGSPINVSP*GTSFWL Trigger: CAGCCAGAATGAGGTTCCCAAAGGACTTACATTAAT...GGGGCTTCCTTTGTATGTTACATGCCTGGTTACATGGGCCTGGACAGCATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS CCA 90 bp | AACGGCTTATCTCTTGTTCTGAGGGAAAGCAGGCTGGTAATGGGATaGAAAACACTTGCACCCAAACGGGCCACAGCCATTAGAGATTTA | + |
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Preference number: 5 (lower is better) Translates to: NGLSLVLRESRLVMG*KTLAPKRATAIRDL Trigger: TAAATCTCTAATGGCTGTGGCCCGTTTGGGTGCAAGTGTTTTCCATCCCATTACCAGCCTGCTTTCCCTCAGAACAAGAGATAAGCCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS-3UTR CAA 90 bp | ATAATTAATGTAAGTCCTTTGGGAACCTCATTCTGGCTGTGTGTAGGTTTCCTGCTGCGGGCTGTTTCCTaGGCAACACTGTGGTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: IINVSPLGTSFWLCVGFLLRAVS*ATLWFS Trigger: GCTAAACCACAGTGTTGCCAAGGAAACAGCCCGCAG...CAGGAAACCTACACACAGCCAGAATGAGGTTCCCAAAGGACTTACATTAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS TCA 72 bp | CCCAACTTCCCTCCCGGGCACCTGACGGCGTGTACGTaGGAGTCGAGCTGCTGCACAGCGGGTCGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PNFPPGHLTACT*ESSCCTAGRRN Trigger: GTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGGTGCCCGGGAGGGAAGTTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS TCA 72 bp | CGGAGCTCTACCTGGCTCTCTCTGACGGCGTGTACGTaGGAGTCGAGCTGCTGCACAGCGGGTCGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RSSTWLSLTACT*ESSCCTAGRRN Trigger: GTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGAGAGAGCCAGGTAGAGCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368685.6 |
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| CDS TCA 72 bp | CCTCATTTATGCGGCACAGTTCTGACGGCGTGTACGTaGGAGTCGAGCTGCTGCACAGCGGGTCGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PHLCGTVLTACT*ESSCCTAGRRN Trigger: GTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGAACTGTGCCGCATAAATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462880.1 |
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| CDS CCA 72 bp | CCTGAAAGGAGGAGTCCTTTGGCAGCCCTGATGCCCTaGAAGCAAGTGACAGAAACTCAGCCCAGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PERRSPLAALMP*KQVTETQPRGW Trigger: CCAACCCCTGGGCTGAGTTTCTGTCACTTGCTTCCAGGGCATCAGGGCTGCCAAAGGACTCCTCCTTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS CCA 72 bp | CTAAATTTATGCCCACTCCCAGCCAGAACACTTTCTTaGCCCCGCCCCTACAAAGCCAGAGAGACAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LNLCPLPARTLS*PRPYKARETGP Trigger: GGGGCCTGTCTCTCTGGCTTTGTAGGGGCGGGGCCAAGAAAGTGTTCTGGCTGGGAGTGGGCATAAATTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS CAA 72 bp | CCCGAATCCAGCATTGCTCTCCTGCGGGCTGTTTCCTaGGCAACACTGTGGTTTAGCCGTCTCAGTCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PESSIALLRAVS*ATLWFSRLSRS Trigger: GGAACGACTGAGACGGCTAAACCACAGTGTTGCCAAGGAAACAGCCCGCAGGAGAGCAATGCTGGATTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368685.6 ENST00000462880.1 ENST00000478558.1 |
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| CDS CAA 72 bp | CCTAAATTTATGCCCACTCCCAGCCAGAACACTTTCTaGGCCCCGCCCCTACAAAGCCAGAGAGACAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PKFMPTPSQNTF*APPLQSQRDRP Trigger: GGGCCTGTCTCTCTGGCTTTGTAGGGGCGGGGCCAAGAAAGTGTTCTGGCTGGGAGTGGGCATAAATTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS TCA 72 bp | TCAGGAAACGAACTCCCCTACGTATTTACCAAGTACTaGGAGAAGCCGGCCTCCGCTGAACCCTCCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGNELPYVFTKY*EKPASAEPSTC Trigger: GCAGGTGGAGGGTTCAGCGGAGGCCGGCTTCTCTCAGTACTTGGTAAATACGTAGGGGAGTTCGTTTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS GCA 72 bp | CTGTCCTCCCCGCCTCGAATCAGTTTCCTAAATTTATaGCCACTCCCAGCCAGAACACTTTCTTGGCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: LSSPPRISFLNL*PLPARTLSWPR Trigger: GCGGGGCCAAGAAAGTGTTCTGGCTGGGAGTGGGCATAAATTTAGGAAACTGATTCGAGGCGGGGAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS CCA 72 bp | CCGAATCCAGCATTGCTCTCCTGCGGGCTGTTTCCTTaGCAACACTGTGGTTTAGCCGTCTCAGTCGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PNPALLSCGLFP*QHCGLAVSVVP Trigger: AGGAACGACTGAGACGGCTAAACCACAGTGTTGCCAAGGAAACAGCCCGCAGGAGAGCAATGCTGGATTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368685.6 ENST00000462880.1 ENST00000478558.1 |
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| CDS CAA 72 bp | CGGGTACACAGGGATGCTCACTCACCTGTGGCTAGGTaGTCAATTTGTTCCCGGAGCTCTACCTGGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RVHRDAHSPVAR*SICSRSSTWLS Trigger: AGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCACAGGTGAGTGAGCATCCCTGTGTACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS TCA 72 bp | AGGGGTTGGCAAAAACCTAAGGTCCTGAAAGTGGGCTaGAGAATTCCGGGTACACAGGGATGCTCACTCACC | + |
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Preference number: 6 (lower is better) Translates to: RGWQKPKVLKVG*RIPGTQGCSLT Trigger: GGTGAGTGAGCATCCCTGTGTACCCGGAATTCTTCAGCCCACTTTCAGGACCTTAGGTTTTTGCCAACCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS TCA 72 bp | AAACGGGCCACAGCCATTAGAGATTTAAGACATCCCTaGAAGGAGGAGTCCTTTGGCAGCCCTGATGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: KRATAIRDLRHP*KEESFGSPDAL Trigger: CAGGGCATCAGGGCTGCCAAAGGACTCCTCCTTTCAGGGATGTCTTAAATCTCTAATGGCTGTGGCCCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS CCA 72 bp | GTGGCTAGGTTGTCAATTTGTTCCCGGAGCTCTACCTaGCTCTCTCTGCAAAGAGGTACAAGGCCTACAAGG | + |
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Preference number: 6 (lower is better) Translates to: VARLSICSRSST*LSLQRGTRPTR Trigger: CCTTGTAGGCCTTGTACCTCTTTGCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000474959.5 ENST00000478558.1 |
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| CDS CAA 90 bp | GAAGAATTCCGGGTACACAGGGATGCTCACTCACCTGTGGCTAGGTaGTCAATTTGTTCCCGGAGCTCTACCTGGCTCTCTCTGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: EEFRVHRDAHSPVAR*SICSRSSTWLSLQR Trigger: TCTTTGCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCACAGGTGAGTGAGCATCCCTGTGTACCCGGAATTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS CCA 72 bp | AAGAATTCCGGGTACACAGGGATGCTCACTCACCTGTaGCTAGGTTGTCAATTTGTTCCCGGAGCTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: KNSGYTGMLTHL*LGCQFVPGALP Trigger: AGGTAGAGCTCCGGGAACAAATTGACAACCTAGCCACAGGTGAGTGAGCATCCCTGTGTACCCGGAATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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| CDS CCA 72 bp | TCTCTTGTTCTGAGGGAAAGCAGGCTGGTAATGGGATaGAAAACACTTGCACCCAAACGGGCCACAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: SLVLRESRLVMG*KTLAPKRATAI Trigger: AATGGCTGTGGCCCGTTTGGGTGCAAGTGTTTTCCATCCCATTACCAGCCTGCTTTCCCTCAGAACAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478558.1 |
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