RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNAPC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000165684

Ensembl transcript IDs: ENST00000298532.2, ENST00000637388.1, ENST00000682081.1, ENST00000682698.1, ENST00000683251.1

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCTTaGAGGCTGGGGGTGGGCTGTCTCTCGTCAGCAGGGCCACGGGCT +
Preference number: 1 (lower is better)
Translates to: GQSAASRYLASGCLS*RLGVGCLSSAGPRA
Trigger: AGCCCGTGGCCCTGCTGACGAGAGACAGCCCACCCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR GCA 90 bp TGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTaGCTCTCTTGCAGGCTGGGGGTGGGCTGTCTCTCGTCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: CGPGQSAASRYLASG*LSCRLGVGCLSSAG
Trigger: CCCTGCTGACGAGAGACAGCCCACCCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTaGCTGCCTCTCTTGCAGGCTGGGGGTGGGCTGTCTCTCGTCAGC +
Preference number: 1 (lower is better)
Translates to: SLRTWSVSGQQIPGL*LPLLQAGGGLSLVS
Trigger: GCTGACGAGAGACAGCCCACCCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CCA 90 bp TGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTaGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTC +
Preference number: 1 (lower is better)
Translates to: CHTVSRQARLCSLRT*SVSGQQIPGLWLPL
Trigger: GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR GCA 90 bp ATGCTCCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTaGGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGC +
Preference number: 1 (lower is better)
Translates to: MLHATQSVGRPASVH*GPGQSAASRYLASG
Trigger: GCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGGAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CCA 90 bp CCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTaGCCTCTGGCTGCCTCTCTTGCAGGCTGGGGGTGGGCTGTCTCT +
Preference number: 1 (lower is better)
Translates to: PLFTADLVSQRPADT*PLAASLAGWGWAVS
Trigger: AGAGACAGCCCACCCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR GCA 90 bp TCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATaGCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACC +
Preference number: 1 (lower is better)
Translates to: SSKCSGVHLGNSHAP*HTVSRQARLCSLRT
Trigger: GGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR GCA 90 bp ACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATaGTCCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACT +
Preference number: 1 (lower is better)
Translates to: TLFLQVFRCALGEQP*SMPHSQSAGPPLFT
Trigger: AGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR TCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAAGGGCCACGGGCTTCTaGGAAAGTGCTTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPRATGF*ESACPA
Trigger: AGCAGGACAAGCACTTTCTCAGAAGCCCGTGGCCCT...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR GCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGCCCGCCTCTGTTCACTaGGGACCTGGTCAGTCAGCG +
Preference number: 2 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQPASVH*GPGQSA
Trigger: CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGG...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR CCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCAGATACCTGGCCTCTaGCTGCCTCTCTTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAQIPGL*LPLLQA
Trigger: AGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR CCA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCACGGCCAGCAGATACCTaGCCTCTGGCTGCCTCTCTT +
Preference number: 2 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPRPADT*PLAASL
Trigger: AAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCG...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR GCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGTACCTGGCCTCTGGCTaGCTCTCTTGCAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMYLASG*LSCRLG
Trigger: CCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTA...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR CCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCTTGCAGGCTGGGGGTaGGCTGTCTCTCGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQLAGWG*AVSRQQ
Trigger: CTGCTGACGAGAGACAGCCCACCCCCAGCCTGCAAG...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CCA 72 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTaGCCTCTGGCTGCCTCTCTTGCAGGCTGGGGGTGG +
Preference number: 3 (lower is better)
Translates to: TADLVSQRPADT*PLAASLAGWGW
Trigger: CCACCCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CCA 72 bp GTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTaGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: VSRQARLCSLRT*SVSGQQIPGLW
Trigger: CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR GCA 72 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTaGGGACCTGGTCAGTCAGCGGCCAGCAGATACCTG +
Preference number: 3 (lower is better)
Translates to: ATQSVGRPASVH*GPGQSAASRYL
Trigger: CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR GCA 72 bp TGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATaGCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: CSGVHLGNSHAP*HTVSRQARLCS
Trigger: TGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR-3UTR CAA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCACTCTGGCTGCCTCTCTaGCAGGCTGGGGGTGGGCTG +
Preference number: 3 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPLWLPL*QAGGGL
Trigger: CAGCCCACCCCCAGCCTGCAAGAGAGGCAGCCAGAG...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CCA 72 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTaGGGAACAGCCATGCTCCATGCCACACAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: QNFIPPSVQVCT*GTAMLHATQSV
Trigger: GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCACTCGGGACAGGGCCGTaGGCCCTGGCAGGGACCTGC +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPLGTGP*ALAGTC
Trigger: GCAGGTCCCTGCCAGGGCCCACGGCCCTGTCCCGAG...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCGCACCAGCCCCAGTaGGGCTTGCAGTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIPHQPQ*GLQCSG
Trigger: GCCGGAGCACTGCAAGCCTCACTGGGGCTGGTGCGG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCCAGGGCCTGCTTCTCTaGGCCCGCCGGGCGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLQGLLL*ARRASV
Trigger: GACACTCGCCCGGCGGGCGCAGAGAAGCAGGCCCTG...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACTGGCCAGGCGGGCCTaGTGCAGCTGCTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQILARRA*CSCSLR
Trigger: CCTCAGGGAGCAGCTGCAGCAGGCCCGCCTGGCCAG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGACGCCTGGGGTAGGGTaGGCTCCACCCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRTPGVG*APPGWT
Trigger: CGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGT...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCCGCCCATGGGGGATaGCAGGAGCCTGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPPLFTADLVSQRPADTWPAHGG*QEPARQ
Trigger: CTGCCGAGCAGGCTCCTGCCATCCCCCATGGGCGGG...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGGGGAGGCAGCAGAGTaGCCAGCAGCCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLGEAAE*PAALRG
Trigger: GCCCCGCAGGGCTGCTGGCCACTCTGCTGCCTCCCC...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCAGCCGCGATCGCCTaGAGCCGCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TQSVGRPASVHCGPGQSAAAAIA*SRSSSS
Trigger: GGAGGAGGAGGAGCGGCTGCAGGCGATCGCGGCTGC...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTTCACCCTCCCCGGCCTaGGCCTGCTCTGGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASSPSPA*ACSGSS
Trigger: GGACGAGCCAGAGCAGGCGCAGGCCGGGGAGGGTGA...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCGCCCTGCTTCCGGGATaGAGCGGGGGCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLALLPG*SGGLRL
Trigger: CAGTCTCAGGCCCCCGCTGCATCCCGGAAGCAGGGC...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTAGCCCCAGTGAGGCTTaGAGTGCTCCGGCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPSPSEA*SAPAGR
Trigger: GCGGCCGGCCGGAGCACTGCAAGCCTCACTGGGGCT...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACAGAAGTGCCAGGTTTaGCTGCCGCGGGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIQKCQV*LPRGPQ
Trigger: CTGGGGCCCCCGCGGCAGCCAAACCTGGCACTTCTG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACAGCTCACAGAGATCTaGCCGGGGCCCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIQLTEI*PGPRAG
Trigger: CCCTGCCCTGGGCCCCGGCCAGATCTCTGTGAGCTG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCCAGGTGGCCGTGTaGAGCCGCGATCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPLQVAV*SRDRLQ
Trigger: CTGCAGGCGATCGCGGCTGCACACGGCCACCTGGAG...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCGGGCCTGCTGCAGCTaGTCCCTGAGGCCATCCGCT +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASRACCS*SLRPSA
Trigger: AGCGGATGGCCTCAGGGAGCAGCTGCAGCAGGCCCG...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGGTTGTCCTGGAGCTaGCCCCGCACCAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPGLSWS*PRTSPS
Trigger: ACTGGGGCTGGTGCGGGGGCAGCTCCAGGACAACCC...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGGGCATGTGGCTGTCGTaGAGCCCGGCTGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWGMWLS*SPAARP
Trigger: GGGACGGGCAGCCGGGCTGCACGACAGCCACATGCC...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGACCCGCCTCTGTTCACTaGGGACCTGGTCAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: VGRPASVHCGPGQSAASRPASVH*GPGQSA
Trigger: CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGG...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCTCGTGTGTCCTCGTTaGCAGGTGGCCCCACGCCCG +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQLVCPR*QVAPRP
Trigger: CGGGCGTGGGGCCACCTGCCAACGAGGACACACGAG...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCGGCCTGCGCCTGCTCTaGCTCGTCCTCCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLGLRLL*LVLLAA
Trigger: AGCAGCGAGGAGGACGAGCCAGAGCAGGCGCAGGCC...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTTGCTGCCGCCCTGGCTaGCACTGGACCCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPCCRPG*HWTPWE
Trigger: CTCCCAAGGGGTCCAGTGCCAGCCAGGGCGGCAGCA...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCGCTGAGTGGGAGGCCTaGGCAGACCTCGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLAEWEA*ADLGTG
Trigger: CCCTGTCCCGAGGTCTGCCCAGGCCTCCCACTCAGC...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGCGGGGAGAAAGGGTaGCGCCTCAGGCAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLCGEKG*RLRQAL
Trigger: CAGGGCCTGCCTGAGGCGCCACCCTTTCTCCCCGCA...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTGCCAGGGGTCCCTGCTaGCCTGGGAAGGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPARGPC*PGKAHH
Trigger: GTGGTGAGCCTTCCCAGGCCAGCAGGGACCCCTGGC...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCCCGGCGTCCCCCTTaGCTCAGTTGCTGGGATGAC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIPRRPP*LSCWDD
Trigger: GTCATCCCAGCAACTGAGCCAAGGGGGACGCCGGGG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCACTGAGGCCATCCGCTTaGGTCTGCACTACGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPLRPSA*VCTTAG
Trigger: ACCCGCCGTAGTGCAGACTCAAGCGGATGGCCTCAG...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGGAGTCTGGGGCTCCCTaGATGGGGCATGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRESGAP*MGHVAV
Trigger: GACAGCCACATGCCCCATTCAGGGAGCCCCAGACTC...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp GGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACTGGCATGCCGGGTTCTaGGCACGTCCAGGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GRPASVHCGPGQSAASRYWHAGF*ARPGRQ
Trigger: CTGACGACCTGGACGTGCTCAGAACCCGGCATGCCA...GTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGTGCTCCCTCCACTGCTaGCACTGCTGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLCSLHC*HCCCRC
Trigger: GCAGCGGCAGCAGCAGTGGCAGCAGTGGAGGGAGCA...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTGGCTGGCTGGTGCTCTaGCTGGCAGGAACCCACAGG +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPGWLVL*LAGTHR
Trigger: CCTGTGGGTTCCTGCCAGGCAGAGCACCAGCCAGCC...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGTCGTGCAGCCCGGCTaGCCGTCCCTGTCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSVVQPG*PSLSAS
Trigger: ACTTGCAGACAGGGACGGGCAGCCGGGCTGCACGAC...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCACTCCGCTTCCGGGTGTaGCTGGCATGCCGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSLRFRV*LACRVL
Trigger: CAGAACCCGGCATGCCAGGCACACCCGGAAGCGGAG...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTTGCTGCTCCCGGTTCTaGGCCAGCAGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPCCSRF*ASSRLA
Trigger: GGCCAACCTGCTGCTGGCCCAGAACCGGGAGCAGCA...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTGTCCTCGTTGGCAGGTaGCCCCACGCCCGTGACCTT +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASVLVGR*PHARDL
Trigger: AAGGTCACGGGCGTGGGGCCACCTGCCAACGAGGAC...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGAGCCGCGGCTGTGGTaGAAGCTTCCTTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLEPRLW*KLPCCR
Trigger: GCGGCAGCAAGGAAGCTTCCACCACAGCCGCGGCTC...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCCAGGAGCCGCGGCTGTaGTGGAAGCTTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLQEPRL*WKLPCC
Trigger: GCAGCAAGGAAGCTTCCACCACAGCCGCGGCTCCTG...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGTGCGCTCCACCCGGCTaGACGCCAGTCTTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWCAPPG*TPVFGS
Trigger: GGAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCA...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGACACAGTCTTGGGCTTaGGCCGGGGGCCGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRTQSWA*AGGRLK
Trigger: CTTCAACCGGCCCCCGGCCCAAGCCCAAGACTGTGT...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGGAGGAGACCAGCAGCTaGGACGGGAGCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWEETSS*DGSTTG
Trigger: CCCGGTGGTGCTCCCGTCCCAGCTGCTGGTCTCCTC...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATAGTACATTTAAGACGGTaGGACCCGGGGCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIVHLRR*DPGLGG
Trigger: GCCGCCCAGCCCCGGGTCCCACCGTCTTAAATGTAC...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGCAGGCAGGGGGACACTaGTCGCCACATGTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLQAGGH*SPHVAL
Trigger: GAGGGCCACATGTGGCGACCAGTGTCCCCCTGCCTG...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCCGTGGGAGGACGTCCTaGGCTCAGGTATCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLRGRTS*AQVSPW
Trigger: CCAGGGAGATACCTGAGCCCAGGACGTCCTCCCACG...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATATCAGGAGGGTCAGCGTaGGAGGACGTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQISGGSA*EDVLGS
Trigger: TGAGCCCAGGACGTCCTCCCACGCTGACCCTCCTGA...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGACACCACCGAAGGCTaGCAGCCTCCCGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: TQSVGRPASVHCGPGQSADTTEG*QPPGPR
Trigger: CCTTGGTCCGGGAGGCTGCCAGCCTTCGGTGGTGTC...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCTCCTCGAAAGCCTTaGTCCCCTGGGCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPAPRKP*SPGQPS
Trigger: AGAAGGCTGCCCAGGGGATCAAGGCTTTCGAGGAGC...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGAGGTGCTCTGGGCACTTaGGGATGCCTGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: VGRPASVHCGPGQSAASRGALGT*GCLQKM
Trigger: CATCTTCTGCAGGCATCCTCAAGTGCCCAGAGCACC...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATCCCTGCTCCACTCCTaGTTGTTGATGCTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VGRPASVHCGPGQSAASRSLLHS*LLMLGC
Trigger: GCACCCCAGCATCAACAAGCAGGAGTGGAGCAGGGA...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGCCGACGCGCATCTCCTaGACCAGCTGCGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLPTRIS*TSCVSM
Trigger: CATGCTCACGCAGCTGGTGCAGGAGATGCGCGTCGG...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGGGTAGGGGATGTGGCTaGCGACGCGCATCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQGRGCG*RRASPA
Trigger: TGCAGGAGATGCGCGTCGGCAGCCACATCCCCTACC...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCATGCTGCTGCTGCTGCTaGTGCTCCCTCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSCCCCC*CSLHCC
Trigger: GCAGCAGTGGAGGGAGCAGCAGCAGCAGCAGCAGCA...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGTCCATGGCTGGCTGGTaGTCTGCCTGGCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQSMAGW*SAWQEP
Trigger: GGGTTCCTGCCAGGCAGAGCACCAGCCAGCCATGGA...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGTGGTGGAAGCTTCCTTaGTGCCGCCCTGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TQSVGRPASVHCGPGQSAWWKLP*CRPGWH
Trigger: GTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCA...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGAAGCAGCAGGGGCTGTaGCCTCGGCCTCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRKQQGL*PRPLRR
Trigger: TCTTCTCAGAGGCCGAGGGCACAGCCCCTGCTGCTT...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCATGTGGCCCTCCTATGTaGGTCAGGCTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSCGPPM*VRLRGW
Trigger: CCAGCCCCTCAGCCTGACGCACATAGGAGGGCCACA...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTGGGGTGTCTGTCCTaGAGGAAGGCTCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPLGCLS*RKAPVP
Trigger: GGGAACCGGAGCCTTCCTGCAGGACAGACACCCCAG...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGAGGGAGGTGGCCTTGTaGTCCAGGGCCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRREVAL*SRAFLW
Trigger: CCACAAGAAGGCCCTGGAGCACAAGGCCACCTCCCT...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACGGGACCATGTACTGTaGGGACAGCAGCGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIRDHVL*GQQRSV
Trigger: GACAGAGCGCTGCTGTCCCCACAGTACATGGTCCCG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCACCTCCTCTCCATGGCTaGCTGGTGCTCTGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSPPLHG*LVLCLA
Trigger: TGCCAGGCAGAGCACCAGCCAGCCATGGAGAGGAGG...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTACTACGGCGGGTCTCTaGGAAGCCTGTGTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPTTAGL*EACVQG
Trigger: GCCCTGCACACAGGCTTCCCAGAGACCCGCCGTAGT...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAACGTTTGGGAAGAGGTaGCCTGGGGTGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPTFGKR*PGVLWA
Trigger: TGCCCAGAGCACCCCAGGCCACCTCTTCCCAAACGT...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCCAGGCTGCACAGGGCTaGGGGCTGATAGGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CHTVSRQARLCSLRTWSVQAAQG*GLIGQS
Trigger: AGACTGCCCTATCAGCCCCCAGCCCTGTGCAGCCTG...GACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCCACCACCAGGGAGGTaGCCTTGTGCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWPPPGR*PCAPGP
Trigger: AGGCCCTGGAGCACAAGGCCACCTCCCTGGTGGTGG...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCCTTGCAGGCTGGGGGTaGGCTGTCTCTCGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CHTVSRQARLCSLRTWSVLAGWG*AVSRQQ
Trigger: CTGCTGACGAGAGACAGCCCACCCCCAGCCTGCAAG...GACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGACAGATACCTGGCCTCTaGCTGCCTCTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VGRPASVHCGPGQSAASRQIPGL*LPLLQA
Trigger: AGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTATCTG...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGTCCACTCCTGCTTGTTaGTGCTGGGGTGCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GPPLFTADLVSQRPADTWSTPAC*CWGAPS
Trigger: ACTCGGAGCACCCCAGCATCAACAAGCAGGAGTGGA...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp TGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCGCTCAGTTGCTGGGATaGCACCACCGAAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CHTVSRQARLCSLRTWSVAQLLG*HHRRLA
Trigger: TGCCAGCCTTCGGTGGTGTCATCCCAGCAACTGAGC...GACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCAGGGCCACGGGCTTCTaGGAAAGTGCTTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLRATGF*ESACPA
Trigger: AGCAGGACAAGCACTTTCTCAGAAGCCCGTGGCCCT...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGAGAACATCTCCCGCCTaGTCTGAGGCTGCAACCAGC +
Preference number: 4 (lower is better)
Translates to: GPPLFTADLVSQRPADTWRTSPA*SEAATS
Trigger: GCTGGTTGCAGCCTCAGAGCAGGCGGGAGATGTTCT...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTAGAGGTGGCCTGGGGTaGTCTGGGCACTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPRGGLG*SGHLRM
Trigger: CATCCTCAAGTGCCCAGAGCACCCCAGGCCACCTCT...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTGCCAGGTTTGGCTaGCGCGGGGGCCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVSARFG*RGGPRP
Trigger: GGGCCTGGGGCCCCCGCGGCAGCCAAACCTGGCACT...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCGGACAAAGGCCACACTaGCATCCGCTTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLGQRPH*HPLLQD
Trigger: GTCCTGCAGAAGCGGATGGCAGTGTGGCCTTTGTCC...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGCACTTGCTCAGACACTaGGAGCCAGACCGATGGGGC +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLHLLRH*EPDRWG
Trigger: GCCCCATCGGTCTGGCTCCCAGTGTCTGAGCAAGTG...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGTGCCCCTCCTCTCCATaGCTGGCTGGTGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWCPSSP*LAGALP
Trigger: AGGCAGAGCACCAGCCAGCCATGGAGAGGAGGGGCA...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACTGCAGAAGATGAACTaGTGGGTCCCGAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQILQKMN*WVPSTS
Trigger: GCTGGTGCTCGGGACCCACCAGTTCATCTTCTGCAG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCTTCTGCAGGACTTTaGGAGAGGGCGTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPASAGL*ERACVG
Trigger: TCCCACACACGCCCTCTCCCAAAGTCCTGCAGAAGC...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGGGCCCAGAGGCCCCCTaGGCTCCTGTGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQGPEAP*APVSLR
Trigger: CCTCAGGGACACAGGAGCCCAGGGGGCCTCTGGGCC...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCGCGGTCACTCACCACTaGCTTTCGGAGCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLAVTHH*LSEQGL
Trigger: AAGGCCTTGCTCCGAAAGTCAGTGGTGAGTGACCGC...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGTCCATGACTCCCGCCTaGCTCCAAAACACACCCCGA +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQSMTPA*LQNTPR
Trigger: TCGGGGTGTGTTTTGGAGGCAGGCGGGAGTCATGGA...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTGGGTGCTCCGAGTTCTaGCAGAACTTCCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASGCSEF*QNFRIS
Trigger: GGAGATCCGGAAGTTCTGGCAGAACTCGGAGCACCC...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCTGCTCTTTCTGTGTaGAGCTCCGAGCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSAALSV*SSEQPC
Trigger: ACACGGCTGCTCGGAGCTGCACACAGAAAGAGCAGC...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAACTGCCATCCGCTTCTaGAGGACTTTGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSTAIRF*RTLGEG
Trigger: GCCCTCTCCCAAAGTCCTGCAGAAGCGGATGGCAGT...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTCCCCCTTGGCTCAGTTaGTGGGATGACACCACCGAA +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPPPWLS*WDDTTE
Trigger: TTCGGTGGTGTCATCCCAGCAACTGAGCCAAGGGGG...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCCTGCCCGTCCCTGTCTaGAAGTTCCAGCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLLPVPV*KFQLTQ
Trigger: CTGAGTGAGCTGGAACTTGCAGACAGGGACGGGCAG...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAAGAATCGGGGAACCCTaGGACAGGAACCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSRIGEP*DRNLRP
Trigger: GGGTCTGAGGTTCCTGTCCCAGGGTTCCCCGATTCT...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACTCACCTTGGTGCCTTTaGACCCAGCCAGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRPASVHCGPGQSAASRYSPWCL*TQPDPS
Trigger: TGAGGGATCTGGCTGGGTCCAAAGGCACCAAGGTGA...GTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACATCTTCTCCCAGTCGTaGCTGTCCAGCCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GRPASVHCGPGQSAASRYIFSQS*LSSLFP
Trigger: GGGAAACAGGCTGGACAGCCACGACTGGGAGAAGAT...GTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCGCTCCGACACAGTCTTaGGCTTGGGCCGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVAPTQS*AWAGGR
Trigger: CCGGCCCCCGGCCCAAGCCCAAGACTGTGTCGGAGC...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAACTGGTCGCCACATGTaGCCCTCCTATGTGCGTCAG +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSTGRHM*PSYVRQ
Trigger: CTGACGCACATAGGAGGGCCACATGTGGCGACCAGT...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACGTTCCCTGTTCATATTaGCTGGGGGCTGCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRPASVHCGPGQSAASRYVPCSY*LGAAKS
Trigger: GCTCTTGGCAGCCCCCAGCCAATATGAACAGGGAAC...GTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCCTTGGCTCAGTTGCTaGGATGACACCACCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASPWLSC*DDTTEG
Trigger: GCCTTCGGTGGTGTCATCCCAGCAACTGAGCCAAGG...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCATTTACCAGAGTCTaGGGCTCCCTGAATGGGGCA +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPAFTRV*GSLNGA
Trigger: TGCCCCATTCAGGGAGCCCCAGACTCTGGTAAATGC...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGCAGCATCTACATCCATaGCTCCCGCCTGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLQHLHP*LPPASK
Trigger: TTTGGAGGCAGGCGGGAGTCATGGATGTAGATGCTG...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCCAGCTTCTCCTGGATaGCCTCCTGGTAGACCATGT +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQPASPG*PPGRPC
Trigger: ACATGGTCTACCAGGAGGTCATCCAGGAGAAGCTGG...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCTCTTTGAGGCTTCTTaGGCCGGCACGTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQLFEAS*AGTFGK
Trigger: CTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAG...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGATCGTCCTCGTCATTaGTGGCTTCGCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSDRPRH*WLRPTF
Trigger: AAAGGTGGGGCGAAGCCAGCAATGACGAGGACGATC...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGTGCTTCTCCAGGGCTTaGCTCTCCAGCTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWCFSRA*LSSSLE
Trigger: CTCCAGTGAGCTGGAGAGGCAAGCCCTGGAGAAGCA...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGTTGTTGATGCTGGGGTaGTCCGAGTTCTGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRLLMLG*SEFCQN
Trigger: GTTCTGGCAGAACTCGGAGCACCCCAGCATCAACAA...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCATCCTCTGCAATCTTCTaGCACTCCAGGTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSSSAIF*HSRWPC
Trigger: ACACGGCCACCTGGAGTGGCAGAAGATTGCAGAGGA...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCGGGGCTGCCAAGAGCTaGTCAACGCTGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVGAAKS*STLGPW
Trigger: CCAGGGCCCCAGCGTTGAGCAGCTCTTGGCAGCCCC...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGATATTGGCTGGGGGCTaGCAAGAGCTGCTCAACGCT +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQILAGG*QELLNA
Trigger: AGCGTTGAGCAGCTCTTGGCAGCCCCCAGCCAATAT...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATAGGGCTTCTGAGAAAGTaGTTGTCCTGCTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIGLLRK*LSCCSH
Trigger: GTGTGAGCAGCAGGACAAGCACTTTCTCAGAAGCCC...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAAACAGCCATGCTCCATaGCACACAGTCAGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSNSHAP*HTVSRQ
Trigger: CTGCCGACTGACTGTGTGGCATGGAGCATGGCTGTT...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCACTTGGGGAACAGCCATaGTCCATGCCACACAGTCAG +
Preference number: 4 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSLGEQP*SMPHSQ
Trigger: CTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAG...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGAAGCCACATGGAAACTaGCCACCCAGCGTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRKPHGN*PPSVEG
Trigger: ACCTTCTACGCTGGGTGGCCAGTTTCCATGTGGCTT...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCGTCCTCGTCATTGCTaGCTTCGCCCCACCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPRPRHC*LRPTFL
Trigger: AAGAAAGGTGGGGCGAAGCCAGCAATGACGAGGACG...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAAGCTGGTTGATGTCCTaGATCTCCTTCTCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPSWLMS*ISFSAS
Trigger: GGAAGCCGAGAAGGAGATCCAGGACATCAACCAGCT...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCAGCAAGGCCTCTTCTaGAAGCTGGTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPPLFTADLVSQRPADTWQQGLF*KLVDVL
Trigger: CAGGACATCAACCAGCTTCCAGAAGAGGCCTTGCTG...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGGCATCGCTCCTACCTaGCACCTCTTCCCGGATTTT +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLGIAPT*HLFPDF
Trigger: AAAATCCGGGAAGAGGTGCCAGGTAGGAGCGATGCC...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGGAGCCAGACCGATaGGGCAGCTCAGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLWEPDR*GSSEAI
Trigger: AATAGCTTCTGAGCTGCCCCATCGGTCTGGCTCCCA...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGGGCTCCCTTTGTGGCTaGCACTCTTTGAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRGSLCG*HSLRLL
Trigger: AAGAAGCCTCAAAGAGTGCCAGCCACAAAGGGAGCC...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTCTTCGGCTCCCTTTGTaGCTGGCACTCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPLRLPL*LALFEA
Trigger: AGCCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAG...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCCCGGGTGGCCTCCCTaGCACGGGCCTCCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAPGWPP*HGPPEA
Trigger: GGCTTCAGGAGGCCCGTGCCAGGGAGGCCACCCGGG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCCTGTTCATATTGGCTaGGGGCTGCCAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQPVHIG*GLPRAA
Trigger: AGCAGCTCTTGGCAGCCCCCAGCCAATATGAACAGG...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGTCCAGGGCCTTCTTGTaGAGTAGGAGACCGGACAGA +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLSRAFL*SRRPDR
Trigger: TCTGTCCGGTCTCCTACTCCACAAGAAGGCCCTGGA...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGTTCAGTAACTTGGGCTaGAGCAATCGCTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWFSNLG*SNRCRR
Trigger: CCGCCTGCAGCGATTGCTTCAGCCCAAGTTACTGAA...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGTCCTGCTATGTGCTCTaGCAGGAGCCTAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWSCYVL*QEPKPQ
Trigger: TTGGGGCTTAGGCTCCTGGCAGAGCACATAGCAGGA...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACTGGAGACTTTGCTCTaGTTCTGGTGCAAGTACTCG +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQILETLL*FWCKYS
Trigger: CGAGTACTTGCACCAGAAGCAGAGCAAAGTCTCCAG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCTCACTGGAGACTTTaGTCTGCTTCTGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPAHWRL*SASGAS
Trigger: ACTTGCACCAGAAGCAGAGCAAAGTCTCCAGTGAGC...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTGGAAGCTTCCTTGCTaGCGCCCTGGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQWKLPC*RPGWHW
Trigger: CCAGTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCA...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCACCACCCTCCAGGGCCTaGTTCTCTGCGCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPPPSRA*FSAPAG
Trigger: CCCGGCGGGCGCAGAGAAGCAGGCCCTGGAGGGTGG...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCGCCAGGCGGGCCTGCTaGAGCTGCTCCCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAARRAC*SCSLRP
Trigger: TGGCCTCAGGGAGCAGCTGCAGCAGGCCCGCCTGGC...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCGCCTCAGGCAGGCCCTaGTTCCGGGATGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAASGRP*FRDAAG
Trigger: CCCCGCTGCATCCCGGAAGCAGGGCCTGCCTGAGGC...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCCAAGTGTTCAGGTGTaGACTTGGGGAACAGCCATG +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASPSVQV*TWGTAM
Trigger: CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGG...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTGGCCTGGGGTGCTCTaGGCACTTGAGGATGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQWPGVL*ALEDAC
Trigger: GCAGGCATCCTCAAGTGCCCAGAGCACCCCAGGCCA...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCGCCAGCAGGGACGCCTaGGGTAGGGTGCGCTCCACC +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAASRDA*GRVRST
Trigger: GGTGGAGCGCACCCTACCCCAGGCGTCCCTGCTGGC...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGAGAGTCTCTTGTCCTTaGCTGAAGTCCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQRVSCP*LKSQPP
Trigger: AGGAGGCTGGGACTTCAGCCAAGGACAAGAGACTCT...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTAAGGCTCACCACAGCTaGTACAGGAACAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TADLVSQRPADTWPLAASKAHHS*YRNREK
Trigger: CTTCTCCCTGTTCCTGTACCAGCTGTGGTGAGCCTT...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCTTCTTCCCCATCATaGTCTTCCACTTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLASSPS*SSTCSD
Trigger: GTCTGAGCAAGTGGAAGATCATGATGGGGAAGAAGC...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATAAGAGCTTTGTTGTGCTaGTGGAATTTCTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIRALLC*WNFCRH
Trigger: GTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCT...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCATATAGTAGACAATTCTaGGGTAGGGGATGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPYSRQF*GRGCGC
Trigger: GCAGCCACATCCCCTACCGCAGAATTGTCTACTATA...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCTCCCCGGCCTGCGCCTaGTCTGGCTCGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLSPACA*SGSSSS
Trigger: CGAGGAGGACGAGCCAGAGCAGGCGCAGGCCGGGGA...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCTACCTGGCCTCTGGCTaGCTCTCTTGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVYLASG*LSCRLG
Trigger: CCCCAGCCTGCAAGAGAGGCAGCCAGAGGCCAGGTA...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCGAGCCTGCTCGGCAGTaGGCACTGGGCTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAEPARQ*ALGSPE
Trigger: CTCTGGGGAGCCCAGTGCCCACTGCCGAGCAGGCTC...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCGGGCCAGCAGCAGGTTaGCCTCAGCCAGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVGPAAG*PQPASP
Trigger: AGGAGAAGCTGGCTGAGGCCAACCTGCTGCTGGCCC...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTCGAGCTTCAGTAACTTaGGCTGAAGCAATCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPRASVT*AEAIAA
Trigger: TGCAGCGATTGCTTCAGCCCAAGTTACTGAAGCTCG...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAACTTTGCTCTGCTTCTaGTGCAAGTACTCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SQSAGPPLFTADLVSQRPTLLCF*CKYSSF
Trigger: GAAGCTCGAGTACTTGCACCAGAAGCAGAGCAAAGT...TGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCAGGATCCAAGCTCTTaGTCCATCGGTAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQQDPSS*SIGRSA
Trigger: AGCTGATCTACCGATGGACCAAGAGCTTGGATCCTG...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTACCGATCTCGGCACTaGGCATCGCTCCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQYRSRH*ASLLPG
Trigger: GCCAGGTAGGAGCGATGCCCAGTGCCGAGATCGGTA...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCGGCTGGTGCTCTGCCTaGCAGGAACCCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVGWCSA*QEPTGP
Trigger: TGGACCTGTGGGTTCCTGCCAGGCAGAGCACCAGCC...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCGTCAGGCTGAGGGGCTaGACGGGCAGTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLVRLRG*TGSGVG
Trigger: CCCCACCCCACTGCCCGTCCAGCCCCTCAGCCTGAC...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGTGGTGCGGACGCCTTaGGGGGCCAGGGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHVVRTP*GARVAR
Trigger: CCTGGCCACCCTGGCCCCCCAAGGCGTCCGCACCAC...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGGTTCAGGTGTGCACTTaGGGAACAGCCATGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWVQVCT*GTAMLH
Trigger: ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAAC...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCCAGCCAGATCCCTCATaGGTTCCTCCTGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVQPDPS*VPPAAP
Trigger: GGGAGCAGCAGGAGGAACTCATGAGGGATCTGGCTG...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCACCCTCGAAGGTACTaGGAGGGTGGTGCGGACGCC +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAHPRRY*EGGADA
Trigger: GGCGTCCGCACCACCCTCTCAGTACCTTCGAGGGTG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGCCACTGTCCCGTCTCTaGTCCCACACCAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQPLSRL*SHTKPH
Trigger: ATGTGGCTTGGTGTGGGAGCAGAGACGGGACAGTGG...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCAGGGATGGCAGGAGCCTaGTCGGCAGTGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPGMAGA*SAVGTG
Trigger: CCCAGTGCCCACTGCCGAGCAGGCTCCTGCCATCCC...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGCCTCTGTCCACTCCTTaGGTTTCAGAGCTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RPASVHCGPGQSAASRYLPLSTP*VSELCC
Trigger: ACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGG...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACTCAGAAGCTATTTTTaGCCAGTGACCGACACCATA +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQILRSYF*PVTDTI
Trigger: TATGGTGTCGGTCACTGGGCAAAAATAGCTTCTGAG...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGCGCCTCCGGAGACCCTaGTTCTTCCCCATCATGATC +
Preference number: 4 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQRLRRP*FFPIMI
Trigger: GATCATGATGGGGAAGAAGCAGGGTCTCCGGAGGCG...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCGGACCAAGGGGGTTCTaGTTCAGGAGGGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVGPRGF*FRRVSV
Trigger: CACGCTGACCCTCCTGAAGCAGAACCCCCTTGGTCC...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCGGGTGTGCCTGGCATaGCGGGTTCTGAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHARVCLA*RVLSTS
Trigger: GGACGTGCTCAGAACCCGGCATGCCAGGCACACCCG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGCCCAGTTTTTCCATTTaGTCACAAGGAGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: TQSVGRPASVHCGPGQSAPSFSI*SQGAPR
Trigger: TCGAGGAGCTCCTTGTGACCAAATGGAAAAACTGGG...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCTCGATGTGGAACAGCTaGGTAAACAGGGTAAACACA +
Preference number: 4 (lower is better)
Translates to: LRTWSVSGQQIPGLWLPLSMWNS*VNRVNT
Trigger: TGTGTTTACCCTGTTTACCCAGCTGTTCCACATCGA...GAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCCGGCCAGCAGATACCTaGCCTCTGGCTGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVRPADT*PLAASL
Trigger: AAGAGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCG...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGTCCTTTCCAGCTCCTTaGTCTCCTGTGTTATCTTCT +
Preference number: 4 (lower is better)
Translates to: TQSVGRPASVHCGPGQSASFPAP*SPVLSS
Trigger: AGAAGATAACACAGGAGATCAAGGAGCTGGAAAGGA...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATATATTTGGCAACAGCTTaGAGCAACTTAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RQARLCSLRTWSVSGQQIYLATA*SNLASS
Trigger: GGAAGATGCTAAGTTGCTTCAAGCTGTTGCCAAATA...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCGATGCCTGCAGAAGATaGACTGGTGGGTCCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVDACRR*TGGSRA
Trigger: TGCTCGGGACCCACCAGTTCATCTTCTGCAGGCATC...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCGATAGGGCAGTCTGCTaGCCAGAAGAGGCACACGCA +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVDRAVC*PEEAHA
Trigger: TGCGTGTGCCTCTTCTGGGCAGCAGACTGCCCTATC...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCTTCTGCCACTCCAGGTaGCCGTGTGCAGCCGCGATC +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAFCHSR*PCAAAI
Trigger: GATCGCGGCTGCACACGGCCACCTGGAGTGGCAGAA...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATCAGCCGTGTTGGCCCTaGGCACCCTCAGCACGGTCT +
Preference number: 4 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHQPCWP*APSARS
Trigger: AGACCGTGCTGAGGGTGCTCAGGGCCAACACGGCTG...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATTGTGCCCTCGGCCTCTaGGAAGACAGGAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHCALGL*EDRSEG
Trigger: CCCCTCGCTCCTGTCTTCTCAGAGGCCGAGGGCACA...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCATGAGTTCCTCCTGCTaGTCCCGGTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAMSSSC*SRFWAS
Trigger: GCTGGCCCAGAACCGGGAGCAGCAGGAGGAACTCAT...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATCTCCACTGCTGCCACTaGTGCTGCCGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHLHCCH*CCRCCW
Trigger: CCAGCAGCAGCGGCAGCAGCAGTGGCAGCAGTGGAG...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCAAGTGCTTGTCCTGCTaGTCACACCAGCCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAKCLSC*SHQPPP
Trigger: CGGAGGCGGCTGGTGTGAGCAGCAGGACAAGCACTT...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCAAAGCCTTGATCCCCTaGGCAGCCTTCTCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVKALIP*AAFSRV
Trigger: CACACGAGAGAAGGCTGCCCAGGGGATCAAGGCTTT...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCCTGAATGGGGCATGTaGCTGTCGTGCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLPEWGM*LSCSPA
Trigger: AGCCGGGCTGCACGACAGCCACATGCCCCATTCAGG...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCAATCTCCTGCACCAGCTaGGTGAGCATGCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPISCTS*VSMRSS
Trigger: GGAGGACCGCATGCTCACGCAGCTGGTGCAGGAGAT...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGATTTTAAACCAATCCTaGTCCCCGTATTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: TQSVGRPASVHCGPGQSAILNQS*SPYLAT
Trigger: TGTTGCCAAATACGGGGAGCAGGATTGGTTTAAAAT...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCCACACCAAGCCACATaGAAACTGGCCACCCAGCGT +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAPHQAT*KLATQR
Trigger: ACGCTGGGTGGCCAGTTTCCATGTGGCTTGGTGTGG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATTCTGAGATCTCCACGTaGGAGCCCGAGGAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHSEIST*EPEEPG
Trigger: TCCCGGCTCCTCGGGCTCCCACGTGGAGATCTCAGA...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCTGCCATCTTTCACCTTaGTGCCTTTGGACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVCHLSP*CLWTQP
Trigger: TGGCTGGGTCCAAAGGCACCAAGGTGAAAGATGGCA...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCAGGGCCGTGGGCCCTaGCAGGGACCTGCACCGGAC +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQQGRGP*QGPAPD
Trigger: GTCCGGTGCAGGTCCCTGCCAGGGCCCACGGCCCTG...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGGCCGCCTCGCCCTCCTaGGACAGCAGGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQAASPS*DSRPRS
Trigger: GGACCTGGGCCTGCTGTCCCAGGAGGGCGAGGCGGC...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCAGGTCCCCAGCTCCTCTaGAATCTTCTGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPGPQLL*NLLPLQ
Trigger: CTGGAGTGGCAGAAGATTGCAGAGGAGCTGGGGACC...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCAGAAGATGAACTGGTaGGTCCCGAGCACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLQKMNW*VPSTSL
Trigger: CAGGCTGGTGCTCGGGACCCACCAGTTCATCTTCTG...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGGTGGCTGCCTCAGCTaGTCTTTCTGTGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHGGCLS*SFCVQL
Trigger: GAGCTGCACACAGAAAGAGCAGCTGAGGCAGCCACC...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCTCCATGGCTGGCTaGTGCTCTGCCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMLSMAG*CSAWQE
Trigger: TTCCTGCCAGGCAGAGCACCAGCCAGCCATGGAGAG...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGTTGAGCCGGCACGTTTaGGAAGAGGTGGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMLSRHV*EEVAWG
Trigger: ACCCCAGGCCACCTCTTCCCAAACGTGCCGGCTCAA...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR TCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGGATGCAGCGGGGGCCTaGGACTGTCCGAGACCACTC +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQDAAGA*DCPRPL
Trigger: GAGTGGTCTCGGACAGTCTCAGGCCCCCGCTGCATC...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCATCTTTCACCTTGGTaGCTTTGGACCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAHLSPW*LWTQPD
Trigger: ATCTGGCTGGGTCCAAAGGCACCAAGGTGAAAGATG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCTTCAGAGCTTTGTTGTaGTGCTGGAATTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVFRALL*CWNFCR
Trigger: CCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAA...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGAGGGAGGGTGAAGGCTaGCAGGAACCGCGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQREGEG*QEPRPQ
Trigger: TTGCGGGCGCGGTTCCTGGCAGCCTTCACCCTCCCT...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGAGACACACCCGCCCATaGGGGATGGCAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQRHTRP*GMAGAC
Trigger: GCAGGCTCCTGCCATCCCCCATGGGCGGGTGTGTCT...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCCGGCAGTATCGATGTaGAACAGCTGGGTAAACAGG +
Preference number: 4 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLPAVSM*NSWVNR
Trigger: CCTGTTTACCCAGCTGTTCCACATCGATACTGCCGG...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTTCCGGATCTCCTCTaGACTGCGGCTGCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMLPDLL*TAAAFK
Trigger: TTTGAAGGCAGCCGCAGTGCAGAGGAGATCCGGAAG...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGTGCTGCTGGAATTTCTaGAGGCACTGGAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMCCWNF*RHWKAL
Trigger: CAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCA...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCCTGCTCCCCGTATTTaGCAACAGCTTGAAGCAACT +
Preference number: 4 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLPAPRI*QQLEAT
Trigger: AGTTGCTTCAAGCTGTTGCCAAATACGGGGAGCAGG...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
3UTR CAA 72 bp ACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTaGGGGAACAGCCATGCTCCATGCCACACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: TELYSSKCSGVH*GNSHAPCHTVS
Trigger: ACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGTTGGGGGCAGGCTTTTaGCATCTTTCACCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMLGAGF*HLSPWC
Trigger: GCACCAAGGTGAAAGATGGCAAAAGCCTGCCCCCAA...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGGCGAGGGGCAGGGCTTaGATGGTGGAGAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQARGRA*MVESLL
Trigger: CAAGAGACTCTCCACCATGCAAGCCCTGCCCCTCGC...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCAGGTAGATCAGCTGCATaGAGTCTCTCCCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPGRSAA*SLSLPY
Trigger: ATATGGAAGGGAGAGACTCCATGCAGCTGATCTACC...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CCA 90 bp AAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGGGAGGGTTTTATCCTTaGGATCGTCCTCGTCATTGC +
Preference number: 4 (lower is better)
Translates to: KQNFIPPSVQVCTWGTAMGGFYP*DRPRHC
Trigger: GCAATGACGAGGACGATCCCAAGGATAAAACCCTCC...CATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR GCA 90 bp ATTAAAAACAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCAAACTCCTGCTATGTaGTCTGCCAGGAGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: IKNRTLFLQVFRCALGEQQTPAM*SARSLS
Trigger: GCTTAGGCTCCTGGCAGAGCACATAGCAGGAGTTTG...CTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTGTTTTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp ACCCTCCAGGGCCTGCTTCTCTGCGCCCGCCGGGCGAGTGTCTGCTaGGTGGGAGGCCTGGGCAGACCTCGGGACAGGGCCGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: TLQGLLLCARRASVC*VGGLGRPRDRAVGP
Trigger: AGGGCCCACGGCCCTGTCCCGAGGTCTGCCCAGGCCTCCCACTCAGCAGACACTCGCCCGGCGGGCGCAGAGAAGCAGGCCCTGGAGGGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TCCAGGGCCTGCTTCTCTGCGCCCGCCGGGCGAGTGTCTGCTGAGTaGGAGGCCTGGGCAGACCTCGGGACAGGGCCGTGGGCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: SRACFSAPAGRVSAE*EAWADLGTGPWALA
Trigger: TGCCAGGGCCCACGGCCCTGTCCCGAGGTCTGCCCAGGCCTCCCACTCAGCAGACACTCGCCCGGCGGGCGCAGAGAAGCAGGCCCTGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp CCACTGCTGCTGCCGCTGCTGCTGGTAGAGCTCCACCGGACGCTGTaGCGGGCCCTCCGCCGCCGCCTCCGGAGACCCTGCTTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: PLLLPLLLVELHRTL*RALRRRLRRPCFFP
Trigger: GGGGAAGAAGCAGGGTCTCCGGAGGCGGCGGCGGAGGGCCCGTCACAGCGTCCGGTGGAGCTCTACCAGCAGCAGCGGCAGCAGCAGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp GCCTGGGCAGACCTCGGGACAGGGCCGTGGGCCCTGGCAGGGACCTaGACCGGACTCGTCTCCTCTCCAGGAGCCGCGGCTGTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: AWADLGTGPWALAGT*TGLVSSPGAAAVVE
Trigger: TTCCACCACAGCCGCGGCTCCTGGAGAGGAGACGAGTCCGGTGCAGGTCCCTGCCAGGGCCCACGGCCCTGTCCCGAGGTCTGCCCAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp TGGGCCGGGGGCCGGTTGAAGCCAGCAGGGACGCCTGGGGTAGGGTaGGCTCCACCCGGCTGGACGCCAGTCTTCGGCTCCCTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: WAGGRLKPAGTPGVG*APPGWTPVFGSLCG
Trigger: GCCACAAAGGGAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp GTCTTGGGCTTGGGCCGGGGGCCGGTTGAAGCCAGCAGGGACGCCTaGGGTAGGGTGCGCTCCACCCGGCTGGACGCCAGTCTTCGGCTC +
Preference number: 5 (lower is better)
Translates to: VLGLGRGPVEASRDA*GRVRSTRLDASLRL
Trigger: GAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCAAGCCCAAGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp CCAGCAGCTGGGACGGGAGCACCACCGGGCCCCGGGTGGCCTCCCTaGCACGGGCCTCCTGAAGCCGCTTCTCCTGAAGCAGCTCCGACA +
Preference number: 5 (lower is better)
Translates to: PAAGTGAPPGPGWPP*HGPPEAASPEAAPT
Trigger: TGTCGGAGCTGCTTCAGGAGAAGCGGCTTCAGGAGGCCCGTGCCAGGGAGGCCACCCGGGGCCCGGTGGTGCTCCCGTCCCAGCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TCTCCAGGAGCCGCGGCTGTGGTGGAAGCTTCCTTGCTGCCGCCCTaGCTGGCACTGGACCCCTTGGGAGGGCTGAGGGAGGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPGAAAVVEASLLPP*LALDPLGGLREAAG
Trigger: CCCCGCTGCCTCCCTCAGCCCTCCCAAGGGGTCCAGTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCACAGCCGCGGCTCCTGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TGTGGTAGAGGGGGCTGGAGGATCACAGACGAGGAGACCAGCAGCTaGGACGGGAGCACCACCGGGCCCCGGGTGGCCTCCCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: CGRGGWRITDEETSS*DGSTTGPRVASLAR
Trigger: CCGTGCCAGGGAGGCCACCCGGGGCCCGGTGGTGCTCCCGTCCCAGCTGCTGGTCTCCTCGTCTGTGATCCTCCAGCCCCCTCTACCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp GTGTCTGCTGAGTGGGAGGCCTGGGCAGACCTCGGGACAGGGCCGTaGGCCCTGGCAGGGACCTGCACCGGACTCGTCTCCTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VSAEWEAWADLGTGP*ALAGTCTGLVSSPG
Trigger: TCCTGGAGAGGAGACGAGTCCGGTGCAGGTCCCTGCCAGGGCCCACGGCCCTGTCCCGAGGTCTGCCCAGGCCTCCCACTCAGCAGACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp GGTGGCGCCTCAGGCAGGCCCTGCTTCCGGGATGCAGCGGGGGCCTaGGACTGTCCGAGACCACTCTCGGGGCAGCTCACAGAGATCTGG +
Preference number: 5 (lower is better)
Translates to: GGASGRPCFRDAAGA*DCPRPLSGQLTEIW
Trigger: CCAGATCTCTGTGAGCTGCCCCGAGAGTGGTCTCGGACAGTCTCAGGCCCCCGCTGCATCCCGGAAGCAGGGCCTGCCTGAGGCGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp TACTGTGGGGACAGCAGCGCTCTGTCACCCTCCCCGGCCTGCGCCTaGTCTGGCTCGTCCTCCTCGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YCGDSSALSPSPACA*SGSSSSLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCGAGGAGGACGAGCCAGAGCAGGCGCAGGCCGGGGAGGGTGACAGAGCGCTGCTGTCCCCACAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp TGGGGTCCAGGCCAGGCCCTTACCCCCAGCTCCTCTGCAATCTTCTaGCACTCCAGGTGGCCGTGTGCAGCCGCGATCGCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: WGPGQALTPSSSAIF*HSRWPCAAAIACSR
Trigger: GCGGCTGCAGGCGATCGCGGCTGCACACGGCCACCTGGAGTGGCAGAAGATTGCAGAGGAGCTGGGGGTAAGGGCCTGGCCTGGACCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CCA 90 bp GGACCTGCACCGGACTCGTCTCCTCTCCAGGAGCCGCGGCTGTGGTaGAAGCTTCCTTGCTGCCGCCCTGGCTGGCACTGGACCCCTTGG +
Preference number: 5 (lower is better)
Translates to: GPAPDSSPLQEPRLW*KLPCCRPGWHWTPW
Trigger: CCAAGGGGTCCAGTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCACAGCCGCGGCTCCTGGAGAGGAGACGAGTCCGGTGCAGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp GGGCCTCCTGAAGCCGCTTCTCCTGAAGCAGCTCCGACACAGTCTTaGGCTTGGGCCGGGGGCCGGTTGAAGCCAGCAGGGACGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPPEAASPEAAPTQS*AWAGGRLKPAGTPG
Trigger: CCCAGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCAAGCCCAAGACTGTGTCGGAGCTGCTTCAGGAGAAGCGGCTTCAGGAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp GGCAGCCTCCCGGACCAAGGGGGTTCTGCTTCAGGAGGGTCAGCGTaGGAGGACGTCCTGGGCTCAGGTATCTCCCTGGCCACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GSLPDQGGSASGGSA*EDVLGSGISLATWA
Trigger: GGCCCAGGTGGCCAGGGAGATACCTGAGCCCAGGACGTCCTCCCACGCTGACCCTCCTGAAGCAGAACCCCCTTGGTCCGGGAGGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCATGGGCCGGGGGCCGGTaGAAGCCAGCAGGGACGCCT +
Preference number: 5 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSWAGGR*KPAGTP
Trigger: AGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCA...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp ACCATGTACTGTGGGGACAGCAGCGCTCTGTCACCCTCCCCGGCCTaGGCCTGCTCTGGCTCGTCCTCCTCGCTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TMYCGDSSALSPSPA*ACSGSSSSLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCGAGGAGGACGAGCCAGAGCAGGCGCAGGCCGGGGAGGGTGACAGAGCGCTGCTGTCCCCACAGTACATGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp CCTGAAGCCGCTTCTCCTGAAGCAGCTCCGACACAGTCTTGGGCTTaGGCCGGGGGCCGGTTGAAGCCAGCAGGGACGCCTGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: PEAASPEAAPTQSWA*AGGRLKPAGTPGVG
Trigger: CCCTACCCCAGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCAAGCCCAAGACTGTGTCGGAGCTGCTTCAGGAGAAGCGGCTTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCTGGCACTGGACCCCTaGGGAGGGCTGAGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GPPLFTADLVSQRPADTWLALDP*GGLREA
Trigger: TGCCTCCCTCAGCCCTCCCAAGGGGTCCAGTGCCAG...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCAGCTCCGACACAGTCTaGGGCTTGGGCCGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLSSDTV*GLGRGP
Trigger: CGGCCCCCGGCCCAAGCCCAAGACTGTGTCGGAGCT...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTCCAGAAGTGCCAGGTTaGGCTGCCGCGGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QARLCSLRTWSVSGQQIPPEVPG*AAAGAP
Trigger: TGGGGCCCCCGCGGCAGCCAAACCTGGCACTTCTGG...AGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp CCTAGGGCCACAGCCTGGAGGTGGCAACACATAGAAACCTGGCGGTaGGTGAGCACTGGGGACCCCGCACCCGTCCAGCAGCCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: PRATAWRWQHIETWR*VSTGDPAPVQQPPA
Trigger: AGCGGGAGGCTGCTGGACGGGTGCGGGGTCCCCAGTGCTCACTCACCGCCAGGTTTCTATGTGTTGCCACCTCCAGGCTGTGGCCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CCA 90 bp CGGCGTCCCCCTTGGCTCAGTTGCTGGGATGACACCACCGAAGGCTaGCAGCCTCCCGGACCAAGGGGGTTCTGCTTCAGGAGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RRPPWLSCWDDTTEG*QPPGPRGFCFRRVS
Trigger: GCTGACCCTCCTGAAGCAGAACCCCCTTGGTCCGGGAGGCTGCCAGCCTTCGGTGGTGTCATCCCAGCAACTGAGCCAAGGGGGACGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTTCTCGTGTGTCCTCGTaGGCAGGTGGCCCCACGCCC +
Preference number: 5 (lower is better)
Translates to: TADLVSQRPADTWPLAASSRVSS*AGGPTP
Trigger: GGGCGTGGGGCCACCTGCCAACGAGGACACACGAGA...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGGTGGTGGAAGCTTCCTaGCTGCCGCCCTGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GPPLFTADLVSQRPADTWVVEAS*LPPWLA
Trigger: TGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCAC...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCTTGAGCCGGCACGTTaGGGAAGAGGTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GPPLFTADLVSQRPADTWLEPAR*GRGGLG
Trigger: CCCCAGGCCACCTCTTCCCAAACGTGCCGGCTCAAG...CCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCACTCTGGCTGCCTCTCTaGCAGGCTGGGGGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSLWLPL*QAGGGL
Trigger: CAGCCCACCCCCAGCCTGCAAGAGAGGCAGCCAGAG...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp AGTGCTTGTCCTGCTGCTCACACCAGCCGCCTCCGCTTCCGGGTGTaGCTGGCATGCCGGGTTCTGAGCACGTCCAGGTCGTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: SACPAAHTSRLRFRV*LACRVLSTSRSSGS
Trigger: TGACCCTGACGACCTGGACGTGCTCAGAACCCGGCATGCCAGGCACACCCGGAAGCGGAGGCGGCTGGTGTGAGCAGCAGGACAAGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp GTGCCGGGATCCCATTCTCCTTCAGACACACCCGCCCATGGGGGATaGCAGGAGCCTGCTCGGCAGTGGGCACTGGGCTCCCCAGAGAAA +
Preference number: 5 (lower is better)
Translates to: VPGSHSPSDTPAHGG*QEPARQWALGSPEK
Trigger: TTTCTCTGGGGAGCCCAGTGCCCACTGCCGAGCAGGCTCCTGCCATCCCCCATGGGCGGGTGTGTCTGAAGGAGAATGGGATCCCGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TTGAAGCCAGCAGGGACGCCTGGGGTAGGGTGCGCTCCACCCGGCTaGACGCCAGTCTTCGGCTCCCTTTGTGGCTGGCACTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LKPAGTPGVGCAPPG*TPVFGSLCGWHSLR
Trigger: CCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGTCCCTGCTGGCTTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp AGCCTGGAGGTGGCAACACATAGAAACCTGGCGGTGAGTGAGCACTaGGGACCCCGCACCCGTCCAGCAGCCTCCCGCTATAGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: SLEVATHRNLAVSEH*GPRTRPAASRYRAH
Trigger: GTGGGCCCTATAGCGGGAGGCTGCTGGACGGGTGCGGGGTCCCCAGTGCTCACTCACCGCCAGGTTTCTATGTGTTGCCACCTCCAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS-3UTR CAA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGACTCCACTCCTGCTTGTaGATGCTGGGGTGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: VGRPASVHCGPGQSAASRLHSCL*MLGCSE
Trigger: CTCGGAGCACCCCAGCATCAACAAGCAGGAGTGGAG...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCGCTTCTGCAGGACTTaGGGAGAGGGCGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: HSQSAGPPLFTADLVSQRRFCRT*GEGVCG
Trigger: CCCACACACGCCCTCTCCCAAAGTCCTGCAGAAGCG...CCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp TGCATGGTGGAGAGTCTCTTGTCCTTGGCTGAAGTCCCAGCCTCCTaGCAGGAGCCAGAAGTGCCAGGTTTGGCTGCCGCGGGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: CMVESLLSLAEVPAS*QEPEVPGLAAAGAP
Trigger: TGGGGCCCCCGCGGCAGCCAAACCTGGCACTTCTGGCTCCTGGCAGGAGGCTGGGACTTCAGCCAAGGACAAGAGACTCTCCACCATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp CACCTGGGCCTCTCCAGGGACAAAGGCCACACTGCCATCCGCTTCTaGAGGACTTTGGGAGAGGGCGTGTGTGGGAGGAGCTGGGGTGTC +
Preference number: 5 (lower is better)
Translates to: HLGLSRDKGHTAIRF*RTLGEGVCGRSWGV
Trigger: GACACCCCAGCTCCTCCCACACACGCCCTCTCCCAAAGTCCTGCAGAAGCGGATGGCAGTGTGGCCTTTGTCCCTGGAGAGGCCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp GATGACACCACCGAAGGCTGGCAGCCTCCCGGACCAAGGGGGTTCTaGTTCAGGAGGGTCAGCGTGGGAGGACGTCCTGGGCTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: DDTTEGWQPPGPRGF*FRRVSVGGRPGLRY
Trigger: ATACCTGAGCCCAGGACGTCCTCCCACGCTGACCCTCCTGAAGCAGAACCCCCTTGGTCCGGGAGGCTGCCAGCCTTCGGTGGTGTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp CAGATGCAAGGCCGGGAGCCCTCCAGACCATCTCAGAAAGGGCCGTaGACCAGCCTGAAGGCCCTCGTGAGTCCACTCGCCATTCCCGAC +
Preference number: 5 (lower is better)
Translates to: QMQGREPSRPSQKGP*TSLKALVSPLAIPD
Trigger: GTCGGGAATGGCGAGTGGACTCACGAGGGCCTTCAGGCTGGTGCACGGCCCTTTCTGAGATGGTCTGGAGGGCTCCCGGCCTTGCATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CCA 90 bp CACCCGCCCATGGGGGATGGCAGGAGCCTGCTCGGCAGTGGGCACTaGGCTCCCCAGAGAAAGATTAATAGGCCAGGCACAGAATCGGGG +
Preference number: 5 (lower is better)
Translates to: HPPMGDGRSLLGSGH*APQRKINRPGTESG
Trigger: CCCCGATTCTGTGCCTGGCCTATTAATCTTTCTCTGGGGAGCCCAGTGCCCACTGCCGAGCAGGCTCCTGCCATCCCCCATGGGCGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TGGCTGAAGTCCCAGCCTCCTGCCAGGAGCCAGAAGTGCCAGGTTTaGCTGCCGCGGGGGCCCCAGGCCCAGAGAGCGGTACATTTAAGA +
Preference number: 5 (lower is better)
Translates to: WLKSQPPARSQKCQV*LPRGPQAQRAVHLR
Trigger: TCTTAAATGTACCGCTCTCTGGGCCTGGGGCCCCCGCGGCAGCCAAACCTGGCACTTCTGGCTCCTGGCAGGAGGCTGGGACTTCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp CCACACTGCCATCCGCTTCTGCAGGACTTTGGGAGAGGGCGTGTGTaGGAGGAGCTGGGGTGTCTGTCCTGCAGGAAGGCTCCGGTTCCC +
Preference number: 5 (lower is better)
Translates to: PHCHPLLQDFGRGRV*EELGCLSCRKAPVP
Trigger: GGGAACCGGAGCCTTCCTGCAGGACAGACACCCCAGCTCCTCCCACACACGCCCTCTCCCAAAGTCCTGCAGAAGCGGATGGCAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TCAGCGTGGGAGGACGTCCTGGGCTCAGGTATCTCCCTGGCCACCTaGGCCTCTCCAGGGACAAAGGCCACACTGCCATCCGCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SAWEDVLGSGISLAT*ASPGTKATLPSASA
Trigger: TGCAGAAGCGGATGGCAGTGTGGCCTTTGTCCCTGGAGAGGCCCAGGTGGCCAGGGAGATACCTGAGCCCAGGACGTCCTCCCACGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATTCACCTTGGTGCCTTaGGACCCAGCCAGATCCCTC +
Preference number: 5 (lower is better)
Translates to: VGRPASVHCGPGQSAASRFTLVP*DPARSL
Trigger: GAGGGATCTGGCTGGGTCCAAAGGCACCAAGGTGAA...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATATGCTCCAGGGCCTTCTaGTGGAGTAGGAGACCGGAC +
Preference number: 5 (lower is better)
Translates to: RQARLCSLRTWSVSGQQICSRAF*WSRRPD
Trigger: GTCCGGTCTCCTACTCCACAAGAAGGCCCTGGAGCA...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp TCAGCTGCTCTTTCTGTGTGCAGCTCCGAGCAGCCGTGTTGGCCCTaGGCACCCTCAGCACGGTCTCCACAGGCACTGTCAGCAGACGCC +
Preference number: 5 (lower is better)
Translates to: SAALSVCSSEQPCWP*APSARSPQALSADA
Trigger: GGCGTCTGCTGACAGTGCCTGTGGAGACCGTGCTGAGGGTGCTCAGGGCCAACACGGCTGCTCGGAGCTGCACACAGAAAGAGCAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp CCGGCTGGACGCCAGTCTTCGGCTCCCTTTGTGGCTGGCACTCTTTaGGGCTTCTTGAGCCGGCACGTTTGGGAAGAGGTGGCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PAGRQSSAPFVAGTL*GFLSRHVWEEVAWG
Trigger: ACCCCAGGCCACCTCTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACTGGCGTCCAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp GCTGTGCCCTCGGCCTCTGAGAAGACAGGAGCGAGGGGCAGGGCTTaGATGGTGGAGAGTCTCTTGTCCTTGGCTGAAGTCCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AVPSASEKTGARGRA*MVESLLSLAEVPAS
Trigger: GGAGGCTGGGACTTCAGCCAAGGACAAGAGACTCTCCACCATGCAAGCCCTGCCCCTCGCTCCTGTCTTCTCAGAGGCCGAGGGCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp CCTGCTGCTCACACCAGCCGCCTCCGCTTCCGGGTGTGCCTGGCATaGCGGGTTCTGAGCACGTCCAGGTCGTCAGGGTCATTAGAAGTA +
Preference number: 5 (lower is better)
Translates to: PAAHTSRLRFRVCLA*RVLSTSRSSGSLEV
Trigger: TACTTCTAATGACCCTGACGACCTGGACGTGCTCAGAACCCGGCATGCCAGGCACACCCGGAAGCGGAGGCGGCTGGTGTGAGCAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp CACTCGCCATTCCCGACTGTGGGACATGTGCTTGACCCGGGTGGGTaGGGGGTCACAGCAGAACCTGTTGCCAGGGAGGGTGTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: HSPFPTVGHVLDPGG*GVTAEPVAREGVAL
Trigger: TAAGGCCACACCCTCCCTGGCAACAGGTTCTGCTGTGACCCCCCACCCACCCGGGTCAAGCACATGTCCCACAGTCGGGAATGGCGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682698.1
CDS CCA 90 bp TGGTGGCCCCACAGAAGACAGATGGGGACCTGCTGTGCTGTTGAGTaGCCAACCAGGTGCTGCTGGGTCTCTGGGCTCTGGGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: WWPHRRQMGTCCAVE*PTRCCWVSGLWEQL
Trigger: GAGCTGCTCCCAGAGCCCAGAGACCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS-3UTR CAA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTCTGCTCCACTCCTGCTaGTTGATGCTGGGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TADLVSQRPADTWPLAASLLHSC*LMLGCS
Trigger: GGAGCACCCCAGCATCAACAAGCAGGAGTGGAGCAG...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp AGCGAGGGGCAGGGCTTGCATGGTGGAGAGTCTCTTGTCCTTGGCTaGAGTCCCAGCCTCCTGCCAGGAGCCAGAAGTGCCAGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: SEGQGLHGGESLVLG*SPSLLPGARSARFG
Trigger: GCCAAACCTGGCACTTCTGGCTCCTGGCAGGAGGCTGGGACTTCAGCCAAGGACAAGAGACTCTCCACCATGCAAGCCCTGCCCCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp CTCATGGTGGCCCCACAGAAGACAGATGGGGACCTGCTGTGCTGTTaGGTGGCCAACCAGGTGCTGCTGGGTCTCTGGGCTCTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LMVAPQKTDGDLLCC*VANQVLLGLWALGA
Trigger: TGCTCCCAGAGCCCAGAGACCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCCACCATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS GCA 90 bp GAACCTGTTGCCAGGGAGGGTGTGGCCTTACCACCCAATTCCAACTaGACCCGGGCTACAGGGAGCTGTGCTCCAAGCTGCTTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: EPVAREGVALPPNSN*TRATGSCAPSCLGL
Trigger: GAGCCCCAAGCAGCTTGGAGCACAGCTCCCTGTAGCCCGGGTGCAGTTGGAATTGGGTGGTAAGGCCACACCCTCCCTGGCAACAGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682698.1
CDS CCA 90 bp TGCGCTCCACCCGGCTGGACGCCAGTCTTCGGCTCCCTTTGTGGCTaGCACTCTTTGAGGCTTCTTGAGCCGGCACGTTTGGGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: CAPPGWTPVFGSLCG*HSLRLLEPARLGRG
Trigger: ACCTCTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp ACCCCCTCTGCCTTGAGAGCTCATGGTGGCCCCACAGAAGACAGATaGGGACCTGCTGTGCTGTTGAGTGGCCAACCAGGTGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TPSALRAHGGPTEDR*GPAVLLSGQPGAAG
Trigger: CCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCCACCATGAGCTCTCAAGGCAGAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS-3UTR CAA 90 bp TGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCTGTGGCTGGCACTCTTaGAGGCTTCTTGAGCCGGCA +
Preference number: 5 (lower is better)
Translates to: CHTVSRQARLCSLRTWSVCGWHS*RLLEPA
Trigger: TGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCCACA...GACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp CCATTCTCCTTCAGACACACCCGCCCATGGGGGATGGCAGGAGCCTaGTCGGCAGTGGGCACTGGGCTCCCCAGAGAAAGATTAATAGGC +
Preference number: 5 (lower is better)
Translates to: PFSFRHTRPWGMAGA*SAVGTGLPRERLIG
Trigger: GCCTATTAATCTTTCTCTGGGGAGCCCAGTGCCCACTGCCGAGCAGGCTCCTGCCATCCCCCATGGGCGGGTGTGTCTGAAGGAGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp TGCCAGAACTTCCGGATCTCCTCTGCACTGCGGCTGCCTTCAAACTaGACCGACAGAGACACTCAGCCTTGCAGGCCACTGACCCCAGGG +
Preference number: 5 (lower is better)
Translates to: CQNFRISSALRLPSN*TDRDTQPCRPLTPG
Trigger: CCCTGGGGTCAGTGGCCTGCAAGGCTGAGTGTCTCTGTCGGTGCAGTTTGAAGGCAGCCGCAGTGCAGAGGAGATCCGGAAGTTCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS GCA 90 bp TGCCTTGAGAGCTCATGGTGGCCCCACAGAAGACAGATGGGGACCTaGTGTGCTGTTGAGTGGCCAACCAGGTGCTGCTGGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: CLESSWWPHRRQMGT*CAVEWPTRCCWVSG
Trigger: CCCAGAGACCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCCACCATGAGCTCTCAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS GCA 90 bp ACCCGGGACCCCTGGCATGGCCAAAGCCCTCTCAGTGCCCAGAGATaGCCTGGCAGCTTGTATTCTAAAGGCACCCCCTCTGCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: TRDPWHGQSPLSAQR*PGSLYSKGTPSALR
Trigger: TCTCAAGGCAGAGGGGGTGCCTTTAGAATACAAGCTGCCAGGGCATCTCTGGGCACTGAGAGGGCTTTGGCCATGCCAGGGGTCCCGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS-3UTR CAA 90 bp TCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTTGGGGGCAGGCTTTaGCCATCTTTCACCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SLRTWSVSGQQIPGLWLPLGGRL*PSFTLV
Trigger: CACCAAGGTGAAAGATGGCAAAAGCCTGCCCCCAAG...AGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATCCCAGTTTTTCCATTaGGTCACAAGGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VGRPASVHCGPGQSAASRSQFFH*VTRSSS
Trigger: CGAGGAGCTCCTTGTGACCAAATGGAAAAACTGGGA...TCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCCTCCGAGCAGCCGTGTaGGCCCTGAGCACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVLRAAV*ALSTLS
Trigger: GCTGAGGGTGCTCAGGGCCAACACGGCTGCTCGGAG...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGCCTGAGGCCATCCGCTaGAGTCTGCACTACGGCGGG +
Preference number: 5 (lower is better)
Translates to: PPSVQVCTWGTAMLHATQPEAIR*SLHYGG
Trigger: CCCGCCGTAGTGCAGACTCAAGCGGATGGCCTCAGG...CTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCAGTCTTCGGCTCCCTTaGTGGCTGGCACTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLSLRLP*WLALFE
Trigger: CTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACT...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGTTCAGGTGTGCACTaGGGGAACAGCCATGCTCCA +
Preference number: 5 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLCSGVH*GNSHAP
Trigger: TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACA...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp TGCTCTGCCAGGAGCCTAAGCCCCAAGAACATCTCCCGCCTGCTCTaGGGCTGCAACCAGCACAGGCAGGGAGTGGATGAACAAGGACAG +
Preference number: 5 (lower is better)
Translates to: CSARSLSPKNISRLL*GCNQHRQGVDEQGQ
Trigger: CTGTCCTTGTTCATCCACTCCCTGCCTGTGCTGGTTGCAGCCTCAGAGCAGGCGGGAGATGTTCTTGGGGCTTAGGCTCCTGGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp GGAACCCTGGGACAGGAACCTCAGACCCCACAAACTCCTGCTATGTaGTCTGCCAGGAGCCTAAGCCCCAAGAACATCTCCCGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GTLGQEPQTPQTPAM*SARSLSPKNISRLL
Trigger: GAGCAGGCGGGAGATGTTCTTGGGGCTTAGGCTCCTGGCAGAGCACATAGCAGGAGTTTGTGGGGTCTGAGGTTCCTGTCCCAGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp GCTCCGAGTTCTGCCAGAACTTCCGGATCTCCTCTGCACTGCGGCTaGCTTCAAACTGCACCGACAGAGACACTCAGCCTTGCAGGCCAC +
Preference number: 5 (lower is better)
Translates to: APSSARTSGSPLHCG*LQTAPTETLSLAGH
Trigger: GTGGCCTGCAAGGCTGAGTGTCTCTGTCGGTGCAGTTTGAAGGCAGCCGCAGTGCAGAGGAGATCCGGAAGTTCTGGCAGAACTCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS-3UTR CAA 90 bp ACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGCTGCCTCTGGGAGGGTTTTATCCTaGGGATCGTCCTCGTCATTG +
Preference number: 5 (lower is better)
Translates to: TADLVSQRPADTWPLAASGRVLS*GSSSSL
Trigger: CAATGACGAGGACGATCCCAAGGATAAAACCCTCCC...AGAGGCAGCCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCTGGTTGCCATCTTTCACCTaGGTGCCTTTGGACCCAGCC +
Preference number: 5 (lower is better)
Translates to: LCSLRTWSVSGQQIPGLWLPSFT*VPLDPA
Trigger: GGCTGGGTCCAAAGGCACCAAGGTGAAAGATGGCAA...CCAGAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCCCGTGACCTTGTCCTaGAAATACGGCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: GRPASVHCGPGQSAASRYPVTLS*KYGFMK
Trigger: CTTCATGAAGCCGTATTTCAAGGACAAGGTCACGGG...GTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp GCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAAGCTCACTGGAGACTTaGCTCTGCTTCTGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: ATQSVGRPASVHCGPGQSSSLET*LCFWCK
Trigger: CTTGCACCAGAAGCAGAGCAAAGTCTCCAGTGAGCT...TGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCTTCTGAGAAAGTGCTaGTCCTGCTGCTCACACCAG +
Preference number: 5 (lower is better)
Translates to: PHSQSAGPPLFTADLVSQLLRKC*SCCSHQ
Trigger: CTGGTGTGAGCAGCAGGACAAGCACTTTCTCAGAAG...CTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp TCCTCCTCCTCTGTCCACTCCTTGCGTTTCAGAGCTTTGTTGTGCTaGTGGAATTTCTGCAGGCACTGGAAGGCGCTGCGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SSSSVHSLRFRALLC*WNFCRHWKALRLVP
Trigger: GGGGACCAGCCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS GCA 90 bp CGGTCCTCCTCCTCTGTCCACTCCTTGCGTTTCAGAGCTTTGTTGTaGTGCTGGAATTTCTGCAGGCACTGGAAGGCGCTGCGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RSSSSVHSLRFRALL*CWNFCRHWKALRLV
Trigger: GACCAGCCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGAGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CCA 90 bp TCCTCCTCTGTCCACTCCTTGCGTTTCAGAGCTTTGTTGTGCTGCTaGAATTTCTGCAGGCACTGGAAGGCGCTGCGGCTGGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSVHSLRFRALLCC*NFCRHWKALRLVPS
Trigger: GCTGGGGACCAGCCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CCA 90 bp ATCCGCTTCTGCAGGACTTTGGGAGAGGGCGTGTGTGGGAGGAGCTaGGGTGTCTGTCCTGCAGGAAGGCTCCGGTTCCCTGTTCATATT +
Preference number: 5 (lower is better)
Translates to: IRFCRTLGEGVCGRS*GVCPAGRLRFPVHI
Trigger: AATATGAACAGGGAACCGGAGCCTTCCTGCAGGACAGACACCCCAGCTCCTCCCACACACGCCCTCTCCCAAAGTCCTGCAGAAGCGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CCATGCCACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCATCTTCTGGAAGCTGGTaGATGTCCTGGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PCHTVSRQARLCSLRTWSSSGSW*MSWISF
Trigger: GAAGGAGATCCAGGACATCAACCAGCTTCCAGAAGA...TGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGTGGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp ACACAGTCAGTCGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCTCAGAAGCTATTTTaGCCCAGTGACCGACACCAT +
Preference number: 5 (lower is better)
Translates to: TQSVGRPASVHCGPGQSAAQKLF*PSDRHH
Trigger: ATGGTGTCGGTCACTGGGCAAAAATAGCTTCTGAGC...CGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCGACTGACTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGGCCTCATCATGATCTTCCACTaGCTCAGACACTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RLCSLRTWSVSGQQIPGLIMIFH*LRHWEP
Trigger: TGGCTCCCAGTGTCTGAGCAAGTGGAAGATCATGAT...GAGGCCAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp ACCAGGTGCTGCTGGGTCTCTGGGCTCTGGGAGCAGCTCTGTCTTTaGCCAAAGTCATCAGGACAGCAGCGCCTTCTATCAAGTGCGGAC +
Preference number: 5 (lower is better)
Translates to: TRCCWVSGLWEQLCL*PKSSGQQRLLSSAD
Trigger: GTCCGCACTTGATAGAAGGCGCTGCTGTCCTGATGACTTTGGTCAAAGACAGAGCTGCTCCCAGAGCCCAGAGACCCAGCAGCACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS GCA 90 bp GCAAGACCCGCTGCAGAGAACGGGCATACAGCTAAGCTGAACCTCTaGCAAGCCCAAACCAACCAGCCTTGGCTTTTCCTGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ARPAAENGHTAKLNL*QAQTNQPWLFLLAR
Trigger: CCTGGCCAACAGGAAAAGCCAAGGCTGGTTGGTTTGGGCTTGGCAGAGGTTCAGCTTAGCTGTATGCCCGTTCTCTGCAGCGGGTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS-3UTR CAA 90 bp TCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGCTCCTCGAAAGCCTaGATCCCCTGGGCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SKCSGVHLGNSHAPCHTVSSSKA*IPWAAF
Trigger: GAAGGCTGCCCAGGGGATCAAGGCTTTCGAGGAGCT...GACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp AGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATACCTGCGTTTCAGAGCTTTGTaGTGCTGCTGGAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: RPASVHCGPGQSAASRYLRFRAL*CCWNFC
Trigger: GCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACG...CAGGTATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CGGCAGGCCCGCCTCTGTTCACTGCGGACCTGGTCAGTCAGCGGCCAGCAGATATTGCGTTTCAGAGCTTaGTTGTGCTGCTGGAATTTC +
Preference number: 5 (lower is better)
Translates to: RQARLCSLRTWSVSGQQILRFRA*LCCWNF
Trigger: GAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAA...TATCTGCTGGCCGCTGACTGACCAGGTCCGCAGTGAACAGAGGCGGGCCTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 90 bp ATGGCCTGGCAAGACCCGCTGCAGAGAACGGGCATACAGCTAAGCTaGACCTCTGCCAAGCCCAAACCAACCAGCCTTGGCTTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: MAWQDPLQRTGIQLS*TSAKPKPTSLGFSC
Trigger: ACAGGAAAAGCCAAGGCTGGTTGGTTTGGGCTTGGCAGAGGTTCAGCTTAGCTGTATGCCCGTTCTCTGCAGCGGGTCTTGCCAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS-3UTR CAA 90 bp GAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCAGACACAGTCTTGGGCTaGGGCCGGGGGCCGGTTGAA +
Preference number: 5 (lower is better)
Translates to: ELYSSKCSGVHLGNSHAPDTVLG*GRGPVE
Trigger: TTCAACCGGCCCCCGGCCCAAGCCCAAGACTGTGTC...TGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp CCTCCGGGGCCCAGTAACCCTTCTTCAGACCAGGATCCAAGCTCTTaGTCCATCGGTAGATCAGCTGCATGGAGTCTCTCCCTTCCATAT +
Preference number: 5 (lower is better)
Translates to: PPGPSNPSSDQDPSS*SIGRSAAWSLSLPY
Trigger: ATATGGAAGGGAGAGACTCCATGCAGCTGATCTACCGATGGACCAAGAGCTTGGATCCTGGTCTGAAGAAGGGTTACTGGGCCCCGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS TCA 90 bp TTTCCCAGTTTTTCCATTTGGTCACAAGGAGCTCCTCGAAAGCCTTaGTCCCCTGGGCAGCCTTCTCTCGTGTGTCCTCGTTGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FPSFSIWSQGAPRKP*SPGQPSLVCPRWQV
Trigger: CACCTGCCAACGAGGACACACGAGAGAAGGCTGCCCAGGGGATCAAGGCTTTCGAGGAGCTCCTTGTGACCAAATGGAAAAACTGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS GCA 90 bp CCACGGCTGCAAGTAAGCGCAATCTTCGTCCAACTCACTAGGCCTTaGATAGCCAAACATGTAGACTTGGCTCCAGATGCAAGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: PRLQVSAIFVQLTRP*IAKHVDLAPDARPG
Trigger: TCCCGGCCTTGCATCTGGAGCCAAGTCTACATGTTTGGCTATGCAAGGCCTAGTGAGTTGGACGAAGATTGCGCTTACTTGCAGCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CCA 90 bp TCAGCTGCAGGCAGGTTTCTGGGTCTTCAGGGAGGGTTTTATCCTTaGGATCGTCCTCGTCATTGCTGGCTTCGCCCCACCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SAAGRFLGLQGGFYP*DRPRHCWLRPTFLL
Trigger: AAGAAGAAAGGTGGGGCGAAGCCAGCAATGACGAGGACGATCCCAAGGATAAAACCCTCCCTGAAGACCCAGAAACCTGCCTGCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CCA 90 bp GGGGGTCACAGCAGAACGTTAATATTGGAAATCTTCTCCCAGTCGTaGCTGTCCAGCCTGTTTCCCAGCAAGGCCTCTTCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: GGHSRTLILEIFSQS*LSSLFPSKASSGSW
Trigger: CCAGCTTCCAGAAGAGGCCTTGCTGGGAAACAGGCTGGACAGCCACGACTGGGAGAAGATTTCCAATATTAACGTTCTGCTGTGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS-3UTR CAA 90 bp TTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCCCCACGCCCGTGACCTaGTCCTTGAAATACGGCTTC +
Preference number: 5 (lower is better)
Translates to: FIPPSVQVCTWGTAMLHAPTPVT*SLKYGF
Trigger: GAAGCCGTATTTCAAGGACAAGGTCACGGGCGTGGG...GGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp GGACAGCAGCGCCTTCTATCAAGTGCGGACAGTAAGGCTGTGCTGTaGCTTCTTTGGTCACGTGATTATCACCCCATCAGCAAACAGCAG +
Preference number: 5 (lower is better)
Translates to: GQQRLLSSADSKAVL*LLWSRDYHPISKQQ
Trigger: CTGCTGTTTGCTGATGGGGTGATAATCACGTGACCAAAGAAGGCACAGCACAGCCTTACTGTCCGCACTTGATAGAAGGCGCTGCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CCA 90 bp TCTGCTTCAGAATCTGACTCGAGACTTGATTCTGAGATCTCCACGTaGGAGCCCGAGGAGCCGGGATCCAAAATCCTTTCCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SASESDSRLDSEIST*EPEEPGSKILSSSL
Trigger: CAAGGAGCTGGAAAGGATTTTGGATCCCGGCTCCTCGGGCTCCCACGTGGAGATCTCAGAATCAAGTCTCGAGTCAGATTCTGAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CCA 90 bp CTGGATGACCTCCTGGTAGACCATGTTCAGCTGCAGGCAGGTTTCTaGGTCTTCAGGGAGGGTTTTATCCTTGGGATCGTCCTCGTCATT +
Preference number: 5 (lower is better)
Translates to: LDDLLVDHVQLQAGF*VFREGFILGIVLVI
Trigger: AATGACGAGGACGATCCCAAGGATAAAACCCTCCCTGAAGACCCAGAAACCTGCCTGCAGCTGAACATGGTCTACCAGGAGGTCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CCA 90 bp CTGCGGCTGCCTTCAAAGTTAATATTGGAAATCTTCTCCCAGTCGTaGCTGTCCAGCCTGTTTCCCAGCAAGGCCTCTTCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRLPSKLILEIFSQS*LSSLFPSKASSGSW
Trigger: CCAGCTTCCAGAAGAGGCCTTGCTGGGAAACAGGCTGGACAGCCACGACTGGGAGAAGATTTCCAATATTAACTTTGAAGGCAGCCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298532.2
ENST00000637388.1
CDS CCA 90 bp ATTCCAACTGCACCCGGGCTACAGGGAGCTGTGCTCCAAGCTGCTTaGGGCTCAGACCTGCCCCTGACTTACGTTAATATTGGAAATCTT +
Preference number: 5 (lower is better)
Translates to: IPTAPGLQGAVLQAA*GSDLPLTYVNIGNL
Trigger: AAGATTTCCAATATTAACGTAAGTCAGGGGCAGGTCTGAGCCCCAAGCAGCTTGGAGCACAGCTCCCTGTAGCCCGGGTGCAGTTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682698.1
CDS-3UTR CAA 90 bp AACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGGATCGTCCTCGTCATaGCTGGCTTCGCCCCACCTT +
Preference number: 5 (lower is better)
Translates to: NFIPPSVQVCTWGTAMLHGSSSS*LASPHL
Trigger: AAGGTGGGGCGAAGCCAGCAATGACGAGGACGATCC...ATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCGGTTCCCTGTTCATATaGGCTGGGGGCTGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLGSLFI*AGGCQE
Trigger: CTCTTGGCAGCCCCCAGCCAATATGAACAGGGAACC...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 90 bp CATCAGGACAGCAGCGCCTTCTATCAAGTGCGGACAGTAAGGCTGTaGTGTGCCTTCTTTGGTCACGTGATTATCACCCCATCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: HQDSSAFYQVRTVRL*CAFFGHVIITPSAN
Trigger: GTTTGCTGATGGGGTGATAATCACGTGACCAAAGAAGGCACAGCACAGCCTTACTGTCCGCACTTGATAGAAGGCGCTGCTGTCCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CCA 90 bp TCAGACCAGGATCCAAGCTCTTGGTCCATCGGTAGATCAGCTGCATaGAGTCTCTCCCTTCCATATAGTAGACAATTCTGCGGTAGGGGA +
Preference number: 5 (lower is better)
Translates to: SDQDPSSWSIGRSAA*SLSLPYSRQFCGRG
Trigger: TCCCCTACCGCAGAATTGTCTACTATATGGAAGGGAGAGACTCCATGCAGCTGATCTACCGATGGACCAAGAGCTTGGATCCTGGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CCA 90 bp CGCCTTCTATCAAGTGCGGACAGTAAGGCTGTGCTGTGCCTTCTTTaGTCACGTGATTATCACCCCATCAGCAAACAGCAGGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RLLSSADSKAVLCLL*SRDYHPISKQQVSG
Trigger: TCCTGAAACCTGCTGTTTGCTGATGGGGTGATAATCACGTGACCAAAGAAGGCACAGCACAGCCTTACTGTCCGCACTTGATAGAAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS-3UTR CAA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCAATCTGACTCGAGACTaGATTCTGAGATCTCCACGT +
Preference number: 5 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVNLTRD*ILRSPR
Trigger: ACGTGGAGATCTCAGAATCAAGTCTCGAGTCAGATT...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp CAGAACTTTATTCCTCCAAGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCTCCTCTGTCCACTCCTaGCGTTTCAGAGCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: QNFIPPSVQVCTWGTAMLSSVHS*RFRALL
Trigger: CAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGA...GAGCATGGCTGTTCCCCAAGTGCACACCTGAACACTTGGAGGAATAAAGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS-3UTR CAA 90 bp AGTGTTCAGGTGTGCACTTGGGGAACAGCCATGCTCCATGCCACACAGTCAGTCGTATTTGGCAACAGCTaGAAGCAACTTAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: SVQVCTWGTAMLHATQSVVFGNS*KQLSIF
Trigger: GAAGATGCTAAGTTGCTTCAAGCTGTTGCCAAATAC...GACTGACTGTGTGGCATGGAGCATGGCTGTTCCCCAAGTGCACACCTGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 90 bp TGGAAATCTATGAGAAGAAGAGTTCACGCCAAGCTACTCTCAGGGTaGCCTAACAAGCCTCGTTATCAAGACAAGAGACCCAAGTCAGTA +
Preference number: 5 (lower is better)
Translates to: WKSMRRRVHAKLLSG*PNKPRYQDKRPKSV
Trigger: TACTGACTTGGGTCTCTTGTCTTGATAACGAGGCTTGTTAGGCCACCCTGAGAGTAGCTTGGCGTGAACTCTTCTTCTCATAGATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS TCA 90 bp AACAAGCCTCGTTATCAAGACAAGAGACCCAAGTCAGTAAAGAACTaGGTCCTTACTCAGGAAACCAGAAAAGCGGCAAGAACTCACACG +
Preference number: 5 (lower is better)
Translates to: NKPRYQDKRPKSVKN*VLTQETRKAARTHT
Trigger: CGTGTGAGTTCTTGCCGCTTTTCTGGTTTCCTGAGTAAGGACTCAGTTCTTTACTGACTTGGGTCTCTTGTCTTGATAACGAGGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS TCA 72 bp GGCCTGCTTCTCTGCGCCCGCCGGGCGAGTGTCTGCTaGGTGGGAGGCCTGGGCAGACCTCGGGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: GLLLCARRASVC*VGGLGRPRDRA
Trigger: GGCCCTGTCCCGAGGTCTGCCCAGGCCTCCCACTCAGCAGACACTCGCCCGGCGGGCGCAGAGAAGCAGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GAGTGGGAGGCCTGGGCAGACCTCGGGACAGGGCCGTaGGCCCTGGCAGGGACCTGCACCGGACTCGTCTCC +
Preference number: 6 (lower is better)
Translates to: EWEAWADLGTGP*ALAGTCTGLVS
Trigger: GGAGACGAGTCCGGTGCAGGTCCCTGCCAGGGCCCACGGCCCTGTCCCGAGGTCTGCCCAGGCCTCCCACTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp TTGGGCCGGGGGCCGGTTGAAGCCAGCAGGGACGCCTaGGGTAGGGTGCGCTCCACCCGGCTGGACGCCAGT +
Preference number: 6 (lower is better)
Translates to: LGRGPVEASRDA*GRVRSTRLDAS
Trigger: ACTGGCGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GGGACGGGAGCACCACCGGGCCCCGGGTGGCCTCCCTaGCACGGGCCTCCTGAAGCCGCTTCTCCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: GTGAPPGPGWPP*HGPPEAASPEA
Trigger: TGCTTCAGGAGAAGCGGCTTCAGGAGGCCCGTGCCAGGGAGGCCACCCGGGGCCCGGTGGTGCTCCCGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp CCCCGGCCTGCGCCTGCTCTGGCTCGTCCTCCTCGCTaGTGCTGCTGCTGCTGCTGCTGCTCCCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: PRPAPALARPPR*CCCCCCCSLHC
Trigger: GCAGTGGAGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGGAGGACGAGCCAGAGCAGGCGCAGGCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp GGCCGGTTGAAGCCAGCAGGGACGCCTGGGGTAGGGTaGGCTCCACCCGGCTGGACGCCAGTCTTCGGCTCC +
Preference number: 6 (lower is better)
Translates to: GRLKPAGTPGVG*APPGWTPVFGS
Trigger: GGAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGTCCCTGCTGGCTTCAACCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp AGGCCTGGGCAGACCTCGGGACAGGGCCGTGGGCCCTaGCAGGGACCTGCACCGGACTCGTCTCCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: RPGQTSGQGRGP*QGPAPDSSPLQ
Trigger: CTGGAGAGGAGACGAGTCCGGTGCAGGTCCCTGCCAGGGCCCACGGCCCTGTCCCGAGGTCTGCCCAGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GCCGCGGCTGTGGTGGAAGCTTCCTTGCTGCCGCCCTaGCTGGCACTGGACCCCTTGGGAGGGCTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: AAAVVEASLLPP*LALDPLGGLRE
Trigger: CTCCCTCAGCCCTCCCAAGGGGTCCAGTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCACAGCCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GCAGGGACGCCTGGGGTAGGGTGCGCTCCACCCGGCTaGACGCCAGTCTTCGGCTCCCTTTGTGGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: AGTPGVGCAPPG*TPVFGSLCGWH
Trigger: GTGCCAGCCACAAAGGGAGCCGAAGACTGGCGTCCAGCCGGGTGGAGCGCACCCTACCCCAGGCGTCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp GGGACCCCGGCGTCCCCCTTGGCTCAGTTGCTGGGATaGCACCACCGAAGGCTGGCAGCCTCCCGGACCAAG +
Preference number: 6 (lower is better)
Translates to: GTPASPLAQLLG*HHRRLAASRTK
Trigger: CTTGGTCCGGGAGGCTGCCAGCCTTCGGTGGTGTCATCCCAGCAACTGAGCCAAGGGGGACGCCGGGGTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp CCTCTCCAGGAGCCGCGGCTGTGGTGGAAGCTTCCTTaGTGCCGCCCTGGCTGGCACTGGACCCCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: PLQEPRLWWKLP*CRPGWHWTPWE
Trigger: CTCCCAAGGGGTCCAGTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCACAGCCGCGGCTCCTGGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp CCTGCTGCTCACACCAGCCGCCTCCGCTTCCGGGTGTaGCTGGCATGCCGGGTTCTGAGCACGTCCAGGTCG +
Preference number: 6 (lower is better)
Translates to: PAAHTSRLRFRV*LACRVLSTSRS
Trigger: CGACCTGGACGTGCTCAGAACCCGGCATGCCAGGCACACCCGGAAGCGGAGGCGGCTGGTGTGAGCAGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp CCGGACTCGTCTCCTCTCCAGGAGCCGCGGCTGTGGTaGAAGCTTCCTTGCTGCCGCCCTGGCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: PDSSPLQEPRLW*KLPCCRPGWHW
Trigger: CCAGTGCCAGCCAGGGCGGCAGCAAGGAAGCTTCCACCACAGCCGCGGCTCCTGGAGAGGAGACGAGTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp CATATTGGCTGGGGGCTGCCAAGAGCTGCTCAACGCTaGGGCCCTGGGGCCCTGGGCCGCCCGAGTCTCAGT +
Preference number: 6 (lower is better)
Translates to: HIGWGLPRAAQR*GPGALGRPSLS
Trigger: ACTGAGACTCGGGCGGCCCAGGGCCCCAGGGCCCCAGCGTTGAGCAGCTCTTGGCAGCCCCCAGCCAATATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp TCAGGCAGGCCCTGCTTCCGGGATGCAGCGGGGGCCTaGGACTGTCCGAGACCACTCTCGGGGCAGCTCACA +
Preference number: 6 (lower is better)
Translates to: SGRPCFRDAAGA*DCPRPLSGQLT
Trigger: TGTGAGCTGCCCCGAGAGTGGTCTCGGACAGTCTCAGGCCCCCGCTGCATCCCGGAAGCAGGGCCTGCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp ACCGAAGGCTGGCAGCCTCCCGGACCAAGGGGGTTCTaGTTCAGGAGGGTCAGCGTGGGAGGACGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: TEGWQPPGPRGF*FRRVSVGGRPG
Trigger: CCCAGGACGTCCTCCCACGCTGACCCTCCTGAAGCAGAACCCCCTTGGTCCGGGAGGCTGCCAGCCTTCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp CACACCAGCCGCCTCCGCTTCCGGGTGTGCCTGGCATaGCGGGTTCTGAGCACGTCCAGGTCGTCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: HTSRLRFRVCLA*RVLSTSRSSGS
Trigger: TGACCCTGACGACCTGGACGTGCTCAGAACCCGGCATGCCAGGCACACCCGGAAGCGGAGGCGGCTGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp GGCCAGGCCCTTACCCCCAGCTCCTCTGCAATCTTCTaGCACTCCAGGTGGCCGTGTGCAGCCGCGATCGCC +
Preference number: 6 (lower is better)
Translates to: GQALTPSSSAIF*HSRWPCAAAIA
Trigger: GGCGATCGCGGCTGCACACGGCCACCTGGAGTGGCAGAAGATTGCAGAGGAGCTGGGGGTAAGGGCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CCA 72 bp GTCCCCAGCTCCTCTGCAATCTTCTGCCACTCCAGGTaGCCGTGTGCAGCCGCGATCGCCTGCAGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: VPSSSAIFCHSR*PCAAAIACSRS
Trigger: GGAGCGGCTGCAGGCGATCGCGGCTGCACACGGCCACCTGGAGTGGCAGAAGATTGCAGAGGAGCTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CCA 72 bp GCTGGGCGGCCGTGTGGGGTGTGTGGTAGAGGGGGCTaGAGGATCACAGACGAGGAGACCAGCAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: AGRPCGVCGRGG*RITDEETSSWD
Trigger: GTCCCAGCTGCTGGTCTCCTCGTCTGTGATCCTCCAGCCCCCTCTACCACACACCCCACACGGCCGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp CTCCTCTGCAATCTTCTGCCACTCCAGGTGGCCGTGTaGAGCCGCGATCGCCTGCAGCCGCTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLCNLLPLQVAV*SRDRLQPLLLL
Trigger: GAGGAGGAGGAGCGGCTGCAGGCGATCGCGGCTGCACACGGCCACCTGGAGTGGCAGAAGATTGCAGAGGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp GGGATGTGGCTGCCGACGCGCATCTCCTGCACCAGCTaGGTGAGCATGCGGTCCTCCTCCTCTGTCCACTCC +
Preference number: 6 (lower is better)
Translates to: GMWLPTRISCTS*VSMRSSSSVHS
Trigger: GGAGTGGACAGAGGAGGAGGACCGCATGCTCACGCAGCTGGTGCAGGAGATGCGCGTCGGCAGCCACATCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS GCA 72 bp CAGGGGCACCCTAGACGCAGCTCCAGGCTGAGCTGTTaGTCTCCGCCAGCTGGAGGCTTCCACGGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: QGHPRRSSRLSC*SPPAGGFHGCK
Trigger: CTTGCAGCCGTGGAAGCCTCCAGCTGGCGGAGAGCAACAGCTCAGCCTGGAGCTGCGTCTAGGGTGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CCA 72 bp GCCGGGATCCCATTCTCCTTCAGACACACCCGCCCATaGGGGATGGCAGGAGCCTGCTCGGCAGTGGGCACT +
Preference number: 6 (lower is better)
Translates to: AGIPFSFRHTRP*GMAGACSAVGT
Trigger: AGTGCCCACTGCCGAGCAGGCTCCTGCCATCCCCCATGGGCGGGTGTGTCTGAAGGAGAATGGGATCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GCTTCTCCTGAAGCAGCTCCGACACAGTCTTGGGCTTaGGCCGGGGGCCGGTTGAAGCCAGCAGGGACGCCT +
Preference number: 6 (lower is better)
Translates to: ASPEAAPTQSWA*AGGRLKPAGTP
Trigger: AGGCGTCCCTGCTGGCTTCAACCGGCCCCCGGCCCAAGCCCAAGACTGTGTCGGAGCTGCTTCAGGAGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GAAGCCGCTTCTCCTGAAGCAGCTCCGACACAGTCTTaGGCTTGGGCCGGGGGCCGGTTGAAGCCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: EAASPEAAPTQS*AWAGGRLKPAG
Trigger: CCCTGCTGGCTTCAACCGGCCCCCGGCCCAAGCCCAAGACTGTGTCGGAGCTGCTTCAGGAGAAGCGGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp CCGGACCAAGGGGGTTCTGCTTCAGGAGGGTCAGCGTaGGAGGACGTCCTGGGCTCAGGTATCTCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: PDQGGSASGGSA*EDVLGSGISLA
Trigger: GGCCAGGGAGATACCTGAGCCCAGGACGTCCTCCCACGCTGACCCTCCTGAAGCAGAACCCCCTTGGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp ACTGCACCGACAGAGACACTCAGCCTTGCAGGCCACTaGCCCCAGGGGCACCCTAGACGCAGCTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: TAPTETLSLAGH*PQGHPRRSSRL
Trigger: CAGCCTGGAGCTGCGTCTAGGGTGCCCCTGGGGTCAGTGGCCTGCAAGGCTGAGTGTCTCTGTCGGTGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp TTCAGACACACCCGCCCATGGGGGATGGCAGGAGCCTaGTCGGCAGTGGGCACTGGGCTCCCCAGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: FRHTRPWGMAGA*SAVGTGLPRER
Trigger: TCTTTCTCTGGGGAGCCCAGTGCCCACTGCCGAGCAGGCTCCTGCCATCCCCCATGGGCGGGTGTGTCTGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 90 bp GGCTGCCTCAGCTGCTCTTTCTGTGTGCAGCTCCGAGCAGCCGTGTaGGCCCTGAGCACCCTCAGCACGGTCTCCACAGGCACTGTCAGC +
Preference number: 6 (lower is better)
Translates to: GCLSCSFCVQLRAAV*ALSTLSTVSTGTVS
Trigger: GCTGACAGTGCCTGTGGAGACCGTGCTGAGGGTGCTCAGGGCCAACACGGCTGCTCGGAGCTGCACACAGAAAGAGCAGCTGAGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 90 bp CCCGGCTGGACGCCAGTCTTCGGCTCCCTTTGTGGCTGGCACTCTTaGAGGCTTCTTGAGCCGGCACGTTTGGGAAGAGGTGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PGWTPVFGSLCGWHS*RLLEPARLGRGGLG
Trigger: CCCCAGGCCACCTCTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACTGGCGTCCAGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp GGTGGGCTGTCTCTCGTCAGCAGGGCCACGGGCTTCTaGGAAAGTGCTTGTCCTGCTGCTCACACCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GGLSLVSRATGF*ESACPAAHTSR
Trigger: GCGGCTGGTGTGAGCAGCAGGACAAGCACTTTCTCAGAAGCCCGTGGCCCTGCTGACGAGAGACAGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp ACAGCCTGGAGGTGGCAACACATAGAAACCTGGCGGTaGGTGAGCACTGGGGACCCCGCACCCGTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: TAWRWQHIETWR*VSTGDPAPVQQ
Trigger: CTGCTGGACGGGTGCGGGGTCCCCAGTGCTCACTCACCGCCAGGTTTCTATGTGTTGCCACCTCCAGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS GCA 72 bp TGGCCACCTGGGCCTCTCCAGGGACAAAGGCCACACTaGCATCCGCTTCTGCAGGACTTTGGGAGAGGGCGT +
Preference number: 6 (lower is better)
Translates to: WPPGPLQGQRPH*HPLLQDFGRGR
Trigger: ACGCCCTCTCCCAAAGTCCTGCAGAAGCGGATGGCAGTGTGGCCTTTGTCCCTGGAGAGGCCCAGGTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp GCCAGGGAGGGTGTGGCCTTACCACCCAATTCCAACTaGACCCGGGCTACAGGGAGCTGTGCTCCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: AREGVALPPNSN*TRATGSCAPSC
Trigger: GCAGCTTGGAGCACAGCTCCCTGTAGCCCGGGTGCAGTTGGAATTGGGTGGTAAGGCCACACCCTCCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682698.1
CDS CCA 72 bp CCTGCAGGAAGGCTCCGGTTCCCTGTTCATATTGGCTaGGGGCTGCCAAGAGCTGCTCAACGCTGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: PAGRLRFPVHIG*GLPRAAQRWGP
Trigger: AGGGCCCCAGCGTTGAGCAGCTCTTGGCAGCCCCCAGCCAATATGAACAGGGAACCGGAGCCTTCCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp CCTTGGCTCAGTTGCTGGGATGACACCACCGAAGGCTaGCAGCCTCCCGGACCAAGGGGGTTCTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: PWLSCWDDTTEG*QPPGPRGFCFR
Trigger: CCTGAAGCAGAACCCCCTTGGTCCGGGAGGCTGCCAGCCTTCGGTGGTGTCATCCCAGCAACTGAGCCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp GTGGCAACACATAGAAACCTGGCGGTGAGTGAGCACTaGGGACCCCGCACCCGTCCAGCAGCCTCCCGCTAT +
Preference number: 6 (lower is better)
Translates to: VATHRNLAVSEH*GPRTRPAASRY
Trigger: ATAGCGGGAGGCTGCTGGACGGGTGCGGGGTCCCCAGTGCTCACTCACCGCCAGGTTTCTATGTGTTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CAA 72 bp TTGATCCCCTGGGCAGCCTTCTCTCGTGTGTCCTCGTaGGCAGGTGGCCCCACGCCCGTGACCTTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LIPWAAFSRVSS*AGGPTPVTLSL
Trigger: CAAGGACAAGGTCACGGGCGTGGGGCCACCTGCCAACGAGGACACACGAGAGAAGGCTGCCCAGGGGATCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 72 bp AGCTGCTCTTTCTGTGTGCAGCTCCGAGCAGCCGTGTaGGCCCTGAGCACCCTCAGCACGGTCTCCACAGGC +
Preference number: 6 (lower is better)
Translates to: SCSFCVQLRAAV*ALSTLSTVSTG
Trigger: GCCTGTGGAGACCGTGCTGAGGGTGCTCAGGGCCAACACGGCTGCTCGGAGCTGCACACAGAAAGAGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 72 bp GGCCCCACAGAAGACAGATGGGGACCTGCTGTGCTGTaGAGTGGCCAACCAGGTGCTGCTGGGTCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: GPTEDRWGPAVL*SGQPGAAGSLG
Trigger: GCCCAGAGACCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CAA 90 bp GCTCATGGTGGCCCCACAGAAGACAGATGGGGACCTGCTGTGCTGTaGAGTGGCCAACCAGGTGCTGCTGGGTCTCTGGGCTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: AHGGPTEDRWGPAVL*SGQPGAAGSLGSGS
Trigger: GCTCCCAGAGCCCAGAGACCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCCACCATGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CAA 90 bp ACAGGAGCGAGGGGCAGGGCTTGCATGGTGGAGAGTCTCTTGTCCTaGGCTGAAGTCCCAGCCTCCTGCCAGGAGCCAGAAGTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: TGARGRACMVESLLS*AEVPASCQEPEVPG
Trigger: ACCTGGCACTTCTGGCTCCTGGCAGGAGGCTGGGACTTCAGCCAAGGACAAGAGACTCTCCACCATGCAAGCCCTGCCCCTCGCTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp CTTTCTGTGTGCAGCTCCGAGCAGCCGTGTTGGCCCTaGGCACCCTCAGCACGGTCTCCACAGGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: LSVCSSEQPCWP*APSARSPQALS
Trigger: TGACAGTGCCTGTGGAGACCGTGCTGAGGGTGCTCAGGGCCAACACGGCTGCTCGGAGCTGCACACAGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp GCCCCACAGAAGACAGATGGGGACCTGCTGTGCTGTTaGGTGGCCAACCAGGTGCTGCTGGGTCTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: APQKTDGDLLCC*VANQVLLGLWA
Trigger: AGCCCAGAGACCCAGCAGCACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS GCA 72 bp TGTGGCTGTCGTGCAGCCCGGCTGCCCGTCCCTGTCTaGAAGTTCCAGCTCACTCAGGAGGTCTTCATCCTC +
Preference number: 6 (lower is better)
Translates to: CGCRAARLPVPV*KFQLTQEVFIL
Trigger: GAGGATGAAGACCTCCTGAGTGAGCTGGAACTTGCAGACAGGGACGGGCAGCCGGGCTGCACGACAGCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp CTGTCCTGCAGGAAGGCTCCGGTTCCCTGTTCATATTaGCTGGGGGCTGCCAAGAGCTGCTCAACGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LSCRKAPVPCSY*LGAAKSCSTLG
Trigger: CCCCAGCGTTGAGCAGCTCTTGGCAGCCCCCAGCCAATATGAACAGGGAACCGGAGCCTTCCTGCAGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 72 bp GGCTGGCACTCTTTGAGGCTTCTTGAGCCGGCACGTTaGGGAAGAGGTGGCCTGGGGTGCTCTGGGCACTTG +
Preference number: 6 (lower is better)
Translates to: GWHSLRLLEPAR*GRGGLGCSGHL
Trigger: CAAGTGCCCAGAGCACCCCAGGCCACCTCTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 90 bp GAGAAGACAGGAGCGAGGGGCAGGGCTTGCATGGTGGAGAGTCTCTaGTCCTTGGCTGAAGTCCCAGCCTCCTGCCAGGAGCCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: EKTGARGRACMVESL*SLAEVPASCQEPEV
Trigger: CACTTCTGGCTCCTGGCAGGAGGCTGGGACTTCAGCCAAGGACAAGAGACTCTCCACCATGCAAGCCCTGCCCCTCGCTCCTGTCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp ATGGGGGATGGCAGGAGCCTGCTCGGCAGTGGGCACTaGGCTCCCCAGAGAAAGATTAATAGGCCAGGCACA +
Preference number: 6 (lower is better)
Translates to: MGDGRSLLGSGH*APQRKINRPGT
Trigger: TGTGCCTGGCCTATTAATCTTTCTCTGGGGAGCCCAGTGCCCACTGCCGAGCAGGCTCCTGCCATCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp ACAAAGGCCACACTGCCATCCGCTTCTGCAGGACTTTaGGAGAGGGCGTGTGTGGGAGGAGCTGGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: TKATLPSASAGL*ERACVGGAGVS
Trigger: AGACACCCCAGCTCCTCCCACACACGCCCTCTCCCAAAGTCCTGCAGAAGCGGATGGCAGTGTGGCCTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CCA 72 bp ACGCAGCTCCAGGCTGAGCTGTTGCTCTCCGCCAGCTaGAGGCTTCCACGGCTGCAAGTAAGCGCAATCTTC +
Preference number: 6 (lower is better)
Translates to: TQLQAELLLSAS*RLPRLQVSAIF
Trigger: GAAGATTGCGCTTACTTGCAGCCGTGGAAGCCTCCAGCTGGCGGAGAGCAACAGCTCAGCCTGGAGCTGCGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CAA 72 bp TCTGTCCTGCAGGAAGGCTCCGGTTCCCTGTTCATATaGGCTGGGGGCTGCCAAGAGCTGCTCAACGCTGGG +
Preference number: 6 (lower is better)
Translates to: SVLQEGSGSLFI*AGGCQELLNAG
Trigger: CCCAGCGTTGAGCAGCTCTTGGCAGCCCCCAGCCAATATGAACAGGGAACCGGAGCCTTCCTGCAGGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp AGGAGCCTAAGCCCCAAGAACATCTCCCGCCTGCTCTaGGGCTGCAACCAGCACAGGCAGGGAGTGGATGAA +
Preference number: 6 (lower is better)
Translates to: RSLSPKNISRLL*GCNQHRQGVDE
Trigger: TTCATCCACTCCCTGCCTGTGCTGGTTGCAGCCTCAGAGCAGGCGGGAGATGTTCTTGGGGCTTAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS TCA 72 bp CGCCAGTCTTCGGCTCCCTTTGTGGCTGGCACTCTTTaGGGCTTCTTGAGCCGGCACGTTTGGGAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RQSSAPFVAGTL*GFLSRHVWEEV
Trigger: CACCTCTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp CACTCCTGCTTGTTGATGCTGGGGTGCTCCGAGTTCTaGCAGAACTTCCGGATCTCCTCTGCACTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: HSCLLMLGCSEF*QNFRISSALRL
Trigger: CAGCCGCAGTGCAGAGGAGATCCGGAAGTTCTGGCAGAACTCGGAGCACCCCAGCATCAACAAGCAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp TCGGCCTCTGAGAAGACAGGAGCGAGGGGCAGGGCTTaGATGGTGGAGAGTCTCTTGTCCTTGGCTGAAGTC +
Preference number: 6 (lower is better)
Translates to: SASEKTGARGRA*MVESLLSLAEV
Trigger: GACTTCAGCCAAGGACAAGAGACTCTCCACCATGCAAGCCCTGCCCCTCGCTCCTGTCTTCTCAGAGGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp TTCCGGATCTCCTCTGCACTGCGGCTGCCTTCAAACTaGACCGACAGAGACACTCAGCCTTGCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: FRISSALRLPSN*TDRDTQPCRPL
Trigger: CAGTGGCCTGCAAGGCTGAGTGTCTCTGTCGGTGCAGTTTGAAGGCAGCCGCAGTGCAGAGGAGATCCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp AAGGAGACAAACTCCGGTAAACTGGGCATGCACCGCTaGATGGGGAGACCTGGAGGACTGGGAAGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: KETNSGKLGMHR*MGRPGGLGRPR
Trigger: TCTGGGCCTTCCCAGTCCTCCAGGTCTCCCCATGCAGCGGTGCATGCCCAGTTTACCGGAGTTTGTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CCA 72 bp GCCTTGAGAGCTCATGGTGGCCCCACAGAAGACAGATaGGGACCTGCTGTGCTGTTGAGTGGCCAACCAGGT +
Preference number: 6 (lower is better)
Translates to: ALRAHGGPTEDR*GPAVLLSGQPG
Trigger: ACCTGGTTGGCCACTCAACAGCACAGCAGGTCCCCATCTGTCTTCTGTGGGGCCACCATGAGCTCTCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CAA 72 bp GTGTCCTCGTTGGCAGGTGGCCCCACGCCCGTGACCTaGTCCTTGAAATACGGCTTCATGAAGTGCCCCATG +
Preference number: 6 (lower is better)
Translates to: VSSLAGGPTPVT*SLKYGFMKCPM
Trigger: CATGGGGCACTTCATGAAGCCGTATTTCAAGGACAAGGTCACGGGCGTGGGGCCACCTGCCAACGAGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 72 bp CGGAGACCCTGCTTCTTCCCCATCATGATCTTCCACTaGCTCAGACACTGGGAGCCAGACCGATGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RRPCFFPIMIFH*LRHWEPDRWGS
Trigger: GCTGCCCCATCGGTCTGGCTCCCAGTGTCTGAGCAAGTGGAAGATCATGATGGGGAAGAAGCAGGGTCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 90 bp TATGTGCTTGGGGGCAGGCTTTTGCCATCTTTCACCTTGGTGCCTTaGGACCCAGCCAGATCCCTCATGAGTTCCTCCTGCTGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: YVLGGRLLPSFTLVP*DPARSLMSSSCCSR
Trigger: CCGGGAGCAGCAGGAGGAACTCATGAGGGATCTGGCTGGGTCCAAAGGCACCAAGGTGAAAGATGGCAAAAGCCTGCCCCCAAGCACATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 90 bp ATGCGGTCCTCCTCCTCTGTCCACTCCTTGCGTTTCAGAGCTTTGTaGTGCTGCTGGAATTTCTGCAGGCACTGGAAGGCGCTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: MRSSSSVHSLRFRAL*CCWNFCRHWKALRL
Trigger: CAGCCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGAGGACCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CAA 90 bp AGCATGCGGTCCTCCTCCTCTGTCCACTCCTTGCGTTTCAGAGCTTaGTTGTGCTGCTGGAATTTCTGCAGGCACTGGAAGGCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SMRSSSSVHSLRFRA*LCCWNFCRHWKALR
Trigger: CCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGAGGACCGCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS TCA 72 bp CAAGACCCGCTGCAGAGAACGGGCATACAGCTAAGCTaGACCTCTGCCAAGCCCAAACCAACCAGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: QDPLQRTGIQLS*TSAKPKPTSLG
Trigger: GCCAAGGCTGGTTGGTTTGGGCTTGGCAGAGGTTCAGCTTAGCTGTATGCCCGTTCTCTGCAGCGGGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS GCA 72 bp TTGCGTTTCAGAGCTTTGTTGTGCTGCTGGAATTTCTaGAGGCACTGGAAGGCGCTGCGGCTGGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: LRFRALLCCWNF*RHWKALRLVPS
Trigger: GCTGGGGACCAGCCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS GCA 72 bp GTGCTCCGAGTTCTGCCAGAACTTCCGGATCTCCTCTaGACTGCGGCTGCCTTCAAACTGCACCGACAGAGA +
Preference number: 6 (lower is better)
Translates to: VLRVLPELPDLL*TAAAFKLHRQR
Trigger: TCTCTGTCGGTGCAGTTTGAAGGCAGCCGCAGTGCAGAGGAGATCCGGAAGTTCTGGCAGAACTCGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CAA 72 bp ACGCCAGTCTTCGGCTCCCTTTGTGGCTGGCACTCTTaGAGGCTTCTTGAGCCGGCACGTTTGGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: TPVFGSLCGWHS*RLLEPARLGRG
Trigger: ACCTCTTCCCAAACGTGCCGGCTCAAGAAGCCTCAAAGAGTGCCAGCCACAAAGGGAGCCGAAGACTGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 90 bp TGCACCAGCTGCGTGAGCATGCGGTCCTCCTCCTCTGTCCACTCCTaGCGTTTCAGAGCTTTGTTGTGCTGCTGGAATTTCTGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: CTSCVSMRSSSSVHS*RFRALLCCWNFCRH
Trigger: GTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGAGGACCGCATGCTCACGCAGCTGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS GCA 72 bp GGACAGGAACCTCAGACCCCACAAACTCCTGCTATGTaGTCTGCCAGGAGCCTAAGCCCCAAGAACATCTCC +
Preference number: 6 (lower is better)
Translates to: GQEPQTPQTPAM*SARSLSPKNIS
Trigger: GGAGATGTTCTTGGGGCTTAGGCTCCTGGCAGAGCACATAGCAGGAGTTTGTGGGGTCTGAGGTTCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp AACCCTGGGACAGGAACCTCAGACCCCACAAACTCCTaGTATGTGCTCTGCCAGGAGCCTAAGCCCCAAGAA +
Preference number: 6 (lower is better)
Translates to: NPGTGTSDPTNS*YVLCQEPKPQE
Trigger: TTCTTGGGGCTTAGGCTCCTGGCAGAGCACATAGCAGGAGTTTGTGGGGTCTGAGGTTCCTGTCCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS GCA 72 bp TCTGCCAGAACTTCCGGATCTCCTCTGCACTGCGGCTaGCTTCAAACTGCACCGACAGAGACACTCAGCCTT +
Preference number: 6 (lower is better)
Translates to: SARTSGSPLHCG*LQTAPTETLSL
Trigger: AAGGCTGAGTGTCTCTGTCGGTGCAGTTTGAAGGCAGCCGCAGTGCAGAGGAGATCCGGAAGTTCTGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CCA 72 bp GGCATAAAGTCCAGGCATGAGCATCTCTCCATGGCCTaGCAAGACCCGCTGCAGAGAACGGGCATACAGCTA +
Preference number: 6 (lower is better)
Translates to: GIKSRHEHLSMA*QDPLQRTGIQL
Trigger: TAGCTGTATGCCCGTTCTCTGCAGCGGGTCTTGCCAGGCCATGGAGAGATGCTCATGCCTGGACTTTATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CAA 72 bp TCGTTGGCAGGTGGCCCCACGCCCGTGACCTTGTCCTaGAAATACGGCTTCATGAAGTGCCCCATGTATGTG +
Preference number: 6 (lower is better)
Translates to: SLAGGPTPVTLS*KYGFMKCPMYV
Trigger: CACATACATGGGGCACTTCATGAAGCCGTATTTCAAGGACAAGGTCACGGGCGTGGGGCCACCTGCCAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 90 bp TACGGCTTCATGAAGTGCCCCATGTATGTGCTTGGGGGCAGGCTTTaGCCATCTTTCACCTTGGTGCCTTTGGACCCAGCCAGATCCCTC +
Preference number: 6 (lower is better)
Translates to: YGFMKCPMYVLGGRL*PSFTLVPLDPARSL
Trigger: GAGGGATCTGGCTGGGTCCAAAGGCACCAAGGTGAAAGATGGCAAAAGCCTGCCCCCAAGCACATACATGGGGCACTTCATGAAGCCGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS TCA 72 bp GGGCTGAAGCAATCGCTGCAGGCGGTCACTCACCACTaGCTTTCGGAGCAAGGCCTTTTCCCAGTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: GLKQSLQAVTHH*LSEQGLFPVFP
Trigger: TGGAAAAACTGGGAAAAGGCCTTGCTCCGAAAGTCAGTGGTGAGTGACCGCCTGCAGCGATTGCTTCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
ENST00000682698.1
ENST00000683251.1
CDS GCA 72 bp CAGGGAGGGTTTTATCCTTGGGATCGTCCTCGTCATTaGTGGCTTCGCCCCACCTTTCTTCTTCCGAGATCG +
Preference number: 6 (lower is better)
Translates to: QGGFYPWDRPRH*WLRPTFLLPRS
Trigger: CGATCTCGGAAGAAGAAAGGTGGGGCGAAGCCAGCAATGACGAGGACGATCCCAAGGATAAAACCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS GCA 72 bp TCTGTCCACTCCTTGCGTTTCAGAGCTTTGTTGTGCTaGTGGAATTTCTGCAGGCACTGGAAGGCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SVHSLRFRALLC*WNFCRHWKALR
Trigger: CCGCAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS GCA 72 bp GCCTTGCATAGCCAAACATGTAGACTTGGCTCCAGATaGAAGGCCGGGAGCCCTCCAGACCATCTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: ALHSQTCRLGSR*KAGSPPDHLRK
Trigger: CTTTCTGAGATGGTCTGGAGGGCTCCCGGCCTTGCATCTGGAGCCAAGTCTACATGTTTGGCTATGCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp GCTGCAGAGAACGGGCATACAGCTAAGCTGAACCTCTaGCAAGCCCAAACCAACCAGCCTTGGCTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: AAENGHTAKLNL*QAQTNQPWLFL
Trigger: CAGGAAAAGCCAAGGCTGGTTGGTTTGGGCTTGGCAGAGGTTCAGCTTAGCTGTATGCCCGTTCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CCA 72 bp GAGATACCGATCTCGGCACTGGGCATCGCTCCTACCTaGCACCTCTTCCCGGATTTTAAACCAATCCTGCTC +
Preference number: 6 (lower is better)
Translates to: EIPISALGIAPT*HLFPDFKPILL
Trigger: GAGCAGGATTGGTTTAAAATCCGGGAAGAGGTGCCAGGTAGGAGCGATGCCCAGTGCCGAGATCGGTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CAA 72 bp ATGAAGTGCCCCATGTATGTGCTTGGGGGCAGGCTTTaGCCATCTTTCACCTTGGTGCCTTTGGACCCAGCC +
Preference number: 6 (lower is better)
Translates to: MKCPMYVLGGRL*PSFTLVPLDPA
Trigger: GGCTGGGTCCAAAGGCACCAAGGTGAAAGATGGCAAAAGCCTGCCCCCAAGCACATACATGGGGCACTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 90 bp TTCAGCTGCAGGCAGGTTTCTGGGTCTTCAGGGAGGGTTTTATCCTaGGGATCGTCCTCGTCATTGCTGGCTTCGCCCCACCTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: FSCRQVSGSSGRVLS*GSSSSLLASPHLSS
Trigger: AGAAGAAAGGTGGGGCGAAGCCAGCAATGACGAGGACGATCCCAAGGATAAAACCCTCCCTGAAGACCCAGAAACCTGCCTGCAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS TCA 72 bp TTTTCCATTTGGTCACAAGGAGCTCCTCGAAAGCCTTaGTCCCCTGGGCAGCCTTCTCTCGTGTGTCCTCGT +
Preference number: 6 (lower is better)
Translates to: FSIWSQGAPRKP*SPGQPSLVCPR
Trigger: ACGAGGACACACGAGAGAAGGCTGCCCAGGGGATCAAGGCTTTCGAGGAGCTCCTTGTGACCAAATGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS TCA 72 bp TTCTGGTGCAAGTACTCGAGCTTCAGTAACTTGGGCTaGAGCAATCGCTGCAGGCGGTCACTCACCACTGAC +
Preference number: 6 (lower is better)
Translates to: FWCKYSSFSNLG*SNRCRRSLTTD
Trigger: GTCAGTGGTGAGTGACCGCCTGCAGCGATTGCTTCAGCCCAAGTTACTGAAGCTCGAGTACTTGCACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp CCCGTGACCTTGTCCTTGAAATACGGCTTCATGAAGTaGCCCATGTATGTGCTTGGGGGCAGGCTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: PVTLSLKYGFMK*PMYVLGGRLLP
Trigger: TGGCAAAAGCCTGCCCCCAAGCACATACATGGGGCACTTCATGAAGCCGTATTTCAAGGACAAGGTCACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS GCA 72 bp TCCTCTGTCCACTCCTTGCGTTTCAGAGCTTTGTTGTaGTGCTGGAATTTCTGCAGGCACTGGAAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: SSVHSLRFRALL*CWNFCRHWKAL
Trigger: CAGCGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CCA 72 bp GAATCTGACTCGAGACTTGATTCTGAGATCTCCACGTaGGAGCCCGAGGAGCCGGGATCCAAAATCCTTTCC +
Preference number: 6 (lower is better)
Translates to: ESDSRLDSEIST*EPEEPGSKILS
Trigger: GGAAAGGATTTTGGATCCCGGCTCCTCGGGCTCCCACGTGGAGATCTCAGAATCAAGTCTCGAGTCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CCA 72 bp CCCAGTAACCCTTCTTCAGACCAGGATCCAAGCTCTTaGTCCATCGGTAGATCAGCTGCATGGAGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSNPSSDQDPSS*SIGRSAAWSLS
Trigger: GGAGAGACTCCATGCAGCTGATCTACCGATGGACCAAGAGCTTGGATCCTGGTCTGAAGAAGGGTTACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CAA 72 bp TCAGGGAGGGTTTTATCCTTGGGATCGTCCTCGTCATaGCTGGCTTCGCCCCACCTTTCTTCTTCCGAGATC +
Preference number: 6 (lower is better)
Translates to: SGRVLSLGSSSS*LASPHLSSSEI
Trigger: GATCTCGGAAGAAGAAAGGTGGGGCGAAGCCAGCAATGACGAGGACGATCCCAAGGATAAAACCCTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 72 bp TATGTGCTTGGGGGCAGGCTTTTGCCATCTTTCACCTaGGTGCCTTTGGACCCAGCCAGATCCCTCATGAGT +
Preference number: 6 (lower is better)
Translates to: YVLGGRLLPSFT*VPLDPARSLMS
Trigger: ACTCATGAGGGATCTGGCTGGGTCCAAAGGCACCAAGGTGAAAGATGGCAAAAGCCTGCCCCCAAGCACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 72 bp TTTTTCCATTTGGTCACAAGGAGCTCCTCGAAAGCCTaGATCCCCTGGGCAGCCTTCTCTCGTGTGTCCTCG +
Preference number: 6 (lower is better)
Translates to: FFHLVTRSSSKA*IPWAAFSRVSS
Trigger: CGAGGACACACGAGAGAAGGCTGCCCAGGGGATCAAGGCTTTCGAGGAGCTCCTTGTGACCAAATGGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CAA 72 bp TTCTCCAGGGCTTGCCTCTCCAGCTCACTGGAGACTTaGCTCTGCTTCTGGTGCAAGTACTCGAGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: FSRACLSSSLET*LCFWCKYSSFS
Trigger: ACTGAAGCTCGAGTACTTGCACCAGAAGCAGAGCAAAGTCTCCAGTGAGCTGGAGAGGCAAGCCCTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
ENST00000682698.1
CDS CAA 72 bp TCCTCCTCTGTCCACTCCTTGCGTTTCAGAGCTTTGTaGTGCTGCTGGAATTTCTGCAGGCACTGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: SSSVHSLRFRAL*CCWNFCRHWKA
Trigger: CGCCTTCCAGTGCCTGCAGAAATTCCAGCAGCACAACAAAGCTCTGAAACGCAAGGAGTGGACAGAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CAA 90 bp ATCTTCGTCCAACTCACTAGGCCTTGCATAGCCAAACATGTAGACTaGGCTCCAGATGCAAGGCCGGGAGCCCTCCAGACCATCTCAGAA +
Preference number: 6 (lower is better)
Translates to: IFVQLTRPCIAKHVD*APDARPGALQTISE
Trigger: TTCTGAGATGGTCTGGAGGGCTCCCGGCCTTGCATCTGGAGCCAAGTCTACATGTTTGGCTATGCAAGGCCTAGTGAGTTGGACGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS GCA 72 bp CGCCTTCTATCAAGTGCGGACAGTAAGGCTGTGCTGTaGCTTCTTTGGTCACGTGATTATCACCCCATCAGC +
Preference number: 6 (lower is better)
Translates to: RLLSSADSKAVL*LLWSRDYHPIS
Trigger: GCTGATGGGGTGATAATCACGTGACCAAAGAAGGCACAGCACAGCCTTACTGTCCGCACTTGATAGAAGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS GCA 72 bp AGCAGCGCCTTCTATCAAGTGCGGACAGTAAGGCTGTaGTGTGCCTTCTTTGGTCACGTGATTATCACCCCA +
Preference number: 6 (lower is better)
Translates to: SSAFYQVRTVRL*CAFFGHVIITP
Trigger: TGGGGTGATAATCACGTGACCAAAGAAGGCACAGCACAGCCTTACTGTCCGCACTTGATAGAAGGCGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CCA 72 bp TTCTTCCCCATCATGATCTTCCACTTGCTCAGACACTaGGAGCCAGACCGATGGGGCAGCTCAGAAGCTATT +
Preference number: 6 (lower is better)
Translates to: FFPIMIFHLLRH*EPDRWGSSEAI
Trigger: AATAGCTTCTGAGCTGCCCCATCGGTCTGGCTCCCAGTGTCTGAGCAAGTGGAAGATCATGATGGGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298532.2
CDS CAA 72 bp AAGGCAGTGAATCTGCTTCAGAATCTGACTCGAGACTaGATTCTGAGATCTCCACGTGGGAGCCCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: KAVNLLQNLTRD*ILRSPRGSPRS
Trigger: GCTCCTCGGGCTCCCACGTGGAGATCTCAGAATCAAGTCTCGAGTCAGATTCTGAAGCAGATTCACTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682081.1
CDS CCA 72 bp TCAAGTGCGGACAGTAAGGCTGTGCTGTGCCTTCTTTaGTCACGTGATTATCACCCCATCAGCAAACAGCAG +
Preference number: 6 (lower is better)
Translates to: SSADSKAVLCLL*SRDYHPISKQQ
Trigger: CTGCTGTTTGCTGATGGGGTGATAATCACGTGACCAAAGAAGGCACAGCACAGCCTTACTGTCCGCACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683251.1
CDS CCA 72 bp AGCAGAACGTTAATATTGGAAATCTTCTCCCAGTCGTaGCTGTCCAGCCTGTTTCCCAGCAAGGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SRTLILEIFSQS*LSSLFPSKASS
Trigger: AGAAGAGGCCTTGCTGGGAAACAGGCTGGACAGCCACGACTGGGAGAAGATTTCCAATATTAACGTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CCA 72 bp ATGAGAAGAAGAGTTCACGCCAAGCTACTCTCAGGGTaGCCTAACAAGCCTCGTTATCAAGACAAGAGACCC +
Preference number: 6 (lower is better)
Translates to: MRRRVHAKLLSG*PNKPRYQDKRP
Trigger: GGGTCTCTTGTCTTGATAACGAGGCTTGTTAGGCCACCCTGAGAGTAGCTTGGCGTGAACTCTTCTTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682081.1
CDS CAA 72 bp TTTAAACCAATCCTGCTCCCCGTATTTGGCAACAGCTaGAAGCAACTTAGCATCTTCCTCCGGGGCCCAGTA +
Preference number: 6 (lower is better)
Translates to: FKPILLPVFGNS*KQLSIFLRGPV
Trigger: TACTGGGCCCCGGAGGAAGATGCTAAGTTGCTTCAAGCTGTTGCCAAATACGGGGAGCAGGATTGGTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS GCA 72 bp CAAGTAAGCGCAATCTTCGTCCAACTCACTAGGCCTTaGATAGCCAAACATGTAGACTTGGCTCCAGATGCA +
Preference number: 6 (lower is better)
Translates to: QVSAIFVQLTRP*IAKHVDLAPDA
Trigger: TGCATCTGGAGCCAAGTCTACATGTTTGGCTATGCAAGGCCTAGTGAGTTGGACGAAGATTGCGCTTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682081.1
ENST00000682698.1
CDS CCA 72 bp CCTTCAAAGTTAATATTGGAAATCTTCTCCCAGTCGTaGCTGTCCAGCCTGTTTCCCAGCAAGGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: PSKLILEIFSQS*LSSLFPSKASS
Trigger: AGAAGAGGCCTTGCTGGGAAACAGGCTGGACAGCCACGACTGGGAGAAGATTTCCAATATTAACTTTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298532.2
ENST00000637388.1
CDS CCA 72 bp GATCCAAGCTCTTGGTCCATCGGTAGATCAGCTGCATaGAGTCTCTCCCTTCCATATAGTAGACAATTCTGC +
Preference number: 6 (lower is better)
Translates to: DPSSWSIGRSAA*SLSLPYSRQFC
Trigger: GCAGAATTGTCTACTATATGGAAGGGAGAGACTCCATGCAGCTGATCTACCGATGGACCAAGAGCTTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298532.2
ENST00000637388.1
ENST00000682698.1
CDS CCA 72 bp TTTTTGACTTATGGTTTTAGACTTACTTCAGTAACTTaGGCTGAAGCAATCGCTGCAGGCGGTCACTCACCA +
Preference number: 6 (lower is better)
Translates to: FLTYGFRLTSVT*AEAIAAGGHSP
Trigger: TGGTGAGTGACCGCCTGCAGCGATTGCTTCAGCCCAAGTTACTGAAGTAAGTCTAAAACCATAAGTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683251.1