RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SNAPC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000164975

Ensembl transcript IDs: ENST00000380799.1, ENST00000380821.7, ENST00000421710.5, ENST00000461041.1, ENST00000467062.5, ENST00000490969.5, ENST00000610884.4

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAGGAATTTCTTTTGACTTGAACTTGGTGGGATACCTGTATAACTaGTACATAACACACGGGCAAACTGTGGGAGTAACCTGGTTGATT +
Preference number: 1 (lower is better)
Translates to: LGISFDLNLVGYLYN*YITHGQTVGVTWLI
Trigger: AATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGTTATGTATCAGTTATACAGGTATCCCACCAAGTTCAAGTCAAAAGAAATTCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR GCA 90 bp ATAATGAACAATAGAGGATGCAAATGGATGGAAAGAGTTGGTATTTaGATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTG +
Preference number: 1 (lower is better)
Translates to: IMNNRGCKWMERVGI*MERRQYFCCSQAKL
Trigger: CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAACTCTTTCCATCCATTTGCATCCTCTATTGTTCATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
3UTR TCA 90 bp CATAATTTATGTCAGCTTGTACAGGCTGACCTTGCTCTAACTAGTTaGTGTATGTTCGCTTCAAGCATAATTGCTGTTTCTTTAATCATA +
Preference number: 1 (lower is better)
Translates to: HNLCQLVQADLALTS*CMFASSIIAVSLII
Trigger: TATGATTAAAGAAACAGCAATTATGCTTGAAGCGAACATACATCAACTAGTTAGAGCAAGGTCAGCCTGTACAAGCTGACATAAATTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR GCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTAGGCATGGTGCCAGGTaGCTGCAATCCCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: THGQTVGVTWLINFSPQFRHGAR*LQSQLL
Trigger: GAGTAGCTGGGATTGCAGGCACCTGGCACCATGCCT...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR TCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGCTGAGGTTAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQLRLGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTAACCTCAG...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGCGGACTGTTCAAAGTaGATCCTGTTCCTCAGTGGC +
Preference number: 2 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQADCSK*ILFLSG
Trigger: GCCACTGAGGAACAGGATCCACTTTGAACAGTCCGC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR-3UTR TCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGAGGCGGAGGCTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: LKSMVCWQLSICSILALLRRRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAGCCTCCGCCT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR GCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAATGGTGCCAGGTGCCTaGAATCCCAGCTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIMVPGA*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTGCAGGCACCTGGCACCAT...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR CCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTGCGGACTGTTCAAAGTaGATCCTGTTCCTCAGTGGC +
Preference number: 2 (lower is better)
Translates to: TESVNENTRHTRNSCLSSADCSK*ILFLSG
Trigger: GCCACTGAGGAACAGGATCCACTTTGAACAGTCCGC...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR-3UTR CCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACGATCCTGTTCCTCAGTaGCGTTTCTTAGAAATAAGG +
Preference number: 2 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHDPVPQ*RFLEIR
Trigger: CCTTATTTCTAAGAAACGCCACTGAGGAACAGGATC...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR-3UTR TCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAATCAATAGGATCTTaGTTTTTCCATGTCCCCACA +
Preference number: 2 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHQSIGS*FFHVPT
Trigger: TGTGGGGACATGGAAAAATCAAGATCCTATTGATTG...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR CAA 90 bp CATTACCGGAGAATAAGTGAGCCAGAGCTAGCAATCAATAGGATCTaGATTTTTCCATGTCCCCACAGTCATACGAAATCTGCTATTGTT +
Preference number: 2 (lower is better)
Translates to: HYRRISEPELAINRI*IFPCPHSHTKSAIV
Trigger: AACAATAGCAGATTTCGTATGACTGTGGGGACATGGAAAAATCAAGATCCTATTGATTGCTAGCTCTGGCTCACTTATTCTCCGGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR GCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATACATACCAGAAACTCGTaGTTGTCATCTCCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIHTRNS*LSSPSQ
Trigger: TTGGCTTGGAGATGACAAGCACGAGTTTCTGGTATG...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR CAA 90 bp GACTTAAGAACTTTCAGGATCATTGAAATTGTTCATTGGCTCAATTaGTGTGTGTGGTCAAAACTCCACAGCTTGACAAGGCACCAAAAG +
Preference number: 2 (lower is better)
Translates to: DLRTFRIIEIVHWLN*CVWSKLHSLTRHQK
Trigger: CTTTTGGTGCCTTGTCAAGCTGTGGAGTTTTGACCACACACACAAATTGAGCCAATGAACAATTTCAATGATCCTGAAAGTTCTTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGATCCTGTTCCTCAGTaGCGTTTCTTAGAAATAAGG +
Preference number: 2 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHDPVPQ*RFLEIR
Trigger: CCTTATTTCTAAGAAACGCCACTGAGGAACAGGATC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
3UTR-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGATCCTGTTCCTCAGTaGCGTTTCTTAGAAATAAGG +
Preference number: 2 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKDPVPQ*RFLEIR
Trigger: CCTTATTTCTAAGAAACGCCACTGAGGAACAGGATC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
3UTR CAA 90 bp CACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACACTTaGCTGAGTTATTTTGCTTCATCTGCATATTACTTTGGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: HFYARNDGKGLVHDT*LSYFASSAYYFGKK
Trigger: CTTCTTCCCAAAGTAATATGCAGATGAAGCAAAATAACTCAGCAAAGTGTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
3UTR-3UTR GCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACCATACCAGAAACTCGTaGTTGTCATCTCCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYHTRNS*LSSPSQ
Trigger: TTGGCTTGGAGATGACAAGCACGAGTTTCTGGTATG...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR-3UTR CCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACAGGGAAGGCATGGATTaGGAGAAAGAATATGTGTGT +
Preference number: 2 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDREGMD*EKEYVC
Trigger: ACACACATATTCTTTCTCCCAATCCATGCCTTCCCT...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
3UTR-3UTR CCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGAAGGATCTTTACCTTaGAAGCCTCATGGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: LKSMVCWQLSICSILALLEGSLP*KPHGRR
Trigger: CCTTCTACCATGAGGCTTCCAAGGTAAAGATCCTTC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR CCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGAAAGTTTATTTTGCTaGGCGCTGTGGTTCATGCCT +
Preference number: 2 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYESLFC*ALWFMP
Trigger: AGGCATGAACCACAGCGCCCAGCAAAATAAACTTTC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR-3UTR CCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACAGGGAAGGCATGGATTaGGAGAAAGAATATGTGTGT +
Preference number: 2 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYREGMD*EKEYVC
Trigger: ACACACATATTCTTTCTCCCAATCCATGCCTTCCCT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR CCA 72 bp TGGGTTTGCTGCCAAGGAAATAATTTCTTAGTTAACTaGTCACAGAGGTTGTGCTGTTTTGGGAAACGGGGT +
Preference number: 3 (lower is better)
Translates to: WVCCQGNNFLVN*SQRLCCFGKRG
Trigger: ACCCCGTTTCCCAAAACAGCACAACCTCTGTGACCAGTTAACTAAGAAATTATTTCCTTGGCAGCAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR TCA 72 bp TCTTTTGACTTGAACTTGGTGGGATACCTGTATAACTaGTACATAACACACGGGCAAACTGTGGGAGTAACC +
Preference number: 3 (lower is better)
Translates to: SFDLNLVGYLYN*YITHGQTVGVT
Trigger: GGTTACTCCCACAGTTTGCCCGTGTGTTATGTATCAGTTATACAGGTATCCCACCAAGTTCAAGTCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR-3UTR CAA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACCTCAGAAACTCGTGCTaGTCATCTCCAAGCCAATGG +
Preference number: 3 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDLRNSC*SSPSQW
Trigger: CCATTGGCTTGGAGATGACAAGCACGAGTTTCTGAG...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
3UTR TCA 72 bp TGTCAGCTTGTACAGGCTGACCTTGCTCTAACTAGTTaGTGTATGTTCGCTTCAAGCATAATTGCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: CQLVQADLALTS*CMFASSIIAVS
Trigger: AGAAACAGCAATTATGCTTGAAGCGAACATACATCAACTAGTTAGAGCAAGGTCAGCCTGTACAAGCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380821.7
3UTR GCA 72 bp AATAGAGGATGCAAATGGATGGAAAGAGTTGGTATTTaGATGGAAAGAAGACAGTATTTTTGCTGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: NRGCKWMERVGI*MERRQYFCCSQ
Trigger: TTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAACTCTTTCCATCCATTTGCATCCTCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
3UTR-3UTR CAA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACCATCTGCATATTACTTaGGGAAGAAGATACAACATG +
Preference number: 3 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDHLHIT*GRRYNM
Trigger: CATGTTGTATCTTCTTCCCAAAGTAATATGCAGATG...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACCGGAGACTGGGTCCTaGCTGCCACCCACCCCGCTA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEPETGS*LPPTPL
Trigger: TAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCCGCCGCCTCCAGGCTaGAGTCCAGATCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHPPPPG*SPDPWP
Trigger: TGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACCGCCGCCTCCAGGCTaGAGTCCAGATCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEPPPPG*SPDPWP
Trigger: TGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAAGACTGGGTCCTGCCTaGCACCCACCCCGCTACACG +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLERLGPA*HPPRYT
Trigger: CGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAAGTTGCAGCCGCCACTaGCGGAGACTGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLESCSRH*RRLGPA
Trigger: GGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTTTTCCCGGCAGGCCATaGGCAGGCCCGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TESVNENTRHTRNSCLSSFPGRP*AGPPQG
Trigger: GCCCTGGGGCGGGCCTGCCCATGGCCTGCCGGGAAA...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGAAGTTGTAGTTGCTTaGGGCGCCCGGCCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEEVVVA*GARPAS
Trigger: GCTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTGCCACTGCCGGAGACTaGGTCCTGCCTGCCACCCAC +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFATAGD*VLPATH
Trigger: GTGGGTGGCAGGCAGGACCCAGTCTCCGGCAGTGGC...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACTGCAGTCCAGATCCCTaGCCACCGCGGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHCSPDP*PPRHPP
Trigger: GGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCA...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATGCAGTCCAGATCCCTaGCCACCGCGGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLECSPDP*PPRHPP
Trigger: GGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACGATGGAAGTTGTAGTTaGTTGGGGCGCCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHDGSCS*LGRPAG
Trigger: GCCGGCCGGGCGCCCCAAGCAACTACAACTTCCATC...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATCGGAGTCAGCTGCCTaGCTCCCAGGCAGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLESESAA*LPGRAD
Trigger: ATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACAGGTCAGGGCTCCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHRSGLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGGAGCCCTGACCT...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTTCGGAGTCAGCTGCCTaGCTCCCAGGCAGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFSESAA*LPGRAD
Trigger: ATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGA...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCCGGAGACTGGGTCCTaGCTGCCACCCACCCCGCTA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHPETGS*LPPTPL
Trigger: TAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACCGCCGCCTCCAGGCTaGAGTCCAGATCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKPPPPG*SPDPWP
Trigger: TGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGCTCGGTAGGCTGAGGTaGGAGGATCACCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQLGRLR*EDHLSL
Trigger: TAGGCTCAGGTGATCCTCCCACCTCAGCCTACCGAG...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGTAATCGCAGCACTCTaGGAGGCCAAGGCGGATGGA +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQVIAAL*EAKADG
Trigger: TCCATCCGCCTTGGCCTCCCAGAGTGCTGCGATTAC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAGACTGGGTCCTGCCTaGCACCCACCCCGCTACACG +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKRLGPA*HPPRYT
Trigger: CGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAGTTGCAGCCGCCACTaGCGGAGACTGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKSCSRH*RRLGPA
Trigger: GGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACAGTTGCAGCCGCCACTaGCGGAGACTGGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHSCSRH*RRLGPA
Trigger: GGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACT...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACCCGCCGCCTCCAGGCTaGAGTCCAGATCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDPPPPG*SPDPWP
Trigger: TGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGG...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGAAGTTGTAGTTGCTTaGGGCGCCCGGCCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKEVVVA*GARPAS
Trigger: GCTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATATGCAGTCCAGATCCCTaGCCACCGCGGCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGICSPDP*PPRHPP
Trigger: GGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCA...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAAGGCGGAGGCTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIRRRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAGCCTCCGCCT...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGATGGAAGTTGTAGTTaGTTGGGGCGCCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKDGSCS*LGRPAG
Trigger: GCCGGCCGGGCGCCCCAAGCAACTACAACTTCCATC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLERSLLM*SGAWSG
Trigger: TCCTGACCAAGCCCCTGAGCACATCAGCAAAGACCT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTATGGTGCCAGGTGCCTaGAATCCCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFMVPGA*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTGCAGGCACCTGGCACCAT...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGGGAAGCTCATACTCTaGAAAGTTGCAGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEGKLIL*KVAAAT
Trigger: AGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGGGAAGCTCATACTCTaGAAAGTTGCAGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQGKLIL*KVAAAT
Trigger: AGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCCAAAGGCGCCCACATaGAAAGCGCGCGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFPKAPT*KARVFS
Trigger: GCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGG...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCTCCGGAATGACTTCTaGATCCTCACCGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHLRNDF*ILTVLK
Trigger: CTTGAGGACGGTGAGGATCCAGAAGTCATTCCGGAG...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACTCCGGAATGACTTCTaGATCCTCACCGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLELRNDF*ILTVLK
Trigger: CTTGAGGACGGTGAGGATCCAGAAGTCATTCCGGAG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGCGGACTGTTCAAAGTaGATCCTGTTCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEADCSK*ILFLSG
Trigger: GCCACTGAGGAACAGGATCCACTTTGAACAGTCCGC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACAGTATTCTCCGGAATaGCTTCTGGATCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEQYSPE*LLDPHR
Trigger: ACGGTGAGGATCCAGAAGTCATTCCGGAGAATACTG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGTATTCTCCGGAATaGCTTCTGGATCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHQYSPE*LLDPHR
Trigger: ACGGTGAGGATCCAGAAGTCATTCCGGAGAATACTG...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGGTCAGGAGTGTTGCTaGATTCACCACCAATCTGGA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEGQECC*IHHQSG
Trigger: TCCAGATTGGTGGTGAATTCAGCAACACTCCTGACC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGTGTATAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQCIGLC*CAQGLG
Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTATACA...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACGATGGAAGTTGTAGTTaGTTGGGGCGCCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDDGSCS*LGRPAG
Trigger: GCCGGCCGGGCGCCCCAAGCAACTACAACTTCCATC...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR GCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACAGACTGGGTCCTGCCTaGCACCCACCCCGCTACACG +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYRLGPA*HPPRYT
Trigger: CGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFRSLLM*SGAWSG
Trigger: TCCTGACCAAGCCCCTGAGCACATCAGCAAAGACCT...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGAAGTTGTAGTTGCTTaGGGCGCCCGGCCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLEVVVA*GARPAS
Trigger: GCTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAATGTGCTCAGGGGCTTaGTCAGGAGTGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEMCSGA*SGVLLN
Trigger: ATTCAGCAACACTCCTGACCAAGCCCCTGAGCACAT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGAAAATTAGCCAGGCATaGTGCCAGGTGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQKISQA*CQVPAI
Trigger: GATTGCAGGCACCTGGCACCATGCCTGGCTAATTTT...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAATCTGGAGGTCACTaGCACATCGAATTGAATCCC +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHQSGGH*HIELNP
Trigger: GGGATTCAATTCGATGTGTCAGTGACCTCCAGATTG...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGCAATCTGGAGGTCACTaGCACATCGAATTGAATCCC +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQQSGGH*HIELNP
Trigger: GGGATTCAATTCGATGTGTCAGTGACCTCCAGATTG...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACAATCTGGAGGTCACTaGCACATCGAATTGAATCCC +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEQSGGH*HIELNP
Trigger: GGGATTCAATTCGATGTGTCAGTGACCTCCAGATTG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTGGTGGCTCACGCCTGTaGTCCCAAAATTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TESVNENTRHTRNSCLSSGGSRL*SQNFGR
Trigger: CCTCCCAAAATTTTGGGATCACAGGCGTGAGCCACC...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAGGCAGAGGTTGCAGTaGGCTGAGATTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKRQRLQ*AEIAPL
Trigger: CAGTGGGGCAATCTCAGCTCACTGCAACCTCTGCCT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLRSLLM*SGAWSG
Trigger: TCCTGACCAAGCCCCTGAGCACATCAGCAAAGACCT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR GCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGCTGGTCCATAGCCAATaGTTCTTGATAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQLVHSQ*FLIRRG
Trigger: TCCCCTCCTTATCAAGAAGCATTGGCTATGGACCAG...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACTGGTCCATAGCCAATaGTTCTTGATAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLELVHSQ*FLIRRG
Trigger: TCCCCTCCTTATCAAGAAGCATTGGCTATGGACCAG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTCCAAAGGCGCCCACATaGAAAGCGCGCGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: TESVNENTRHTRNSCLSSPKAPT*KARVFS
Trigger: GCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGG...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACTCGGAGTCAGCTGCCTaGCTCCCAGGCAGAGCGGAT +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYSESAA*LPGRAD
Trigger: ATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGA...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAACTGACACATCGAATTaGATCCCTCAGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLETDTSN*IPQLCE
Trigger: CTCACACAACTGAGGGATTCAATTCGATGTGTCAGT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGGGTCAGGAGTGTTGCTaGATTCACCACCAATCTGGA +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLGQECC*IHHQSG
Trigger: TCCAGATTGGTGGTGAATTCAGCAACACTCCTGACC...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCTGTATAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCCIGLC*CAQGLG
Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTATACA...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACTCCAAGCAGTCATCATaGTGCACAAGCCTTATGTCA +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHSKQSS*CTSLMS
Trigger: TGACATAAGGCTTGTGCATCATGATGACTGCTTGGA...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATCCAAGCAGTCATCATaGTGCACAAGCCTTATGTCA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLESKQSS*CTSLMS
Trigger: TGACATAAGGCTTGTGCATCATGATGACTGCTTGGA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGCAGTTTGTTGCCTTCTaGATCATAGTGCAGCATTCG +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQQFVAF*IIVQHS
Trigger: CGAATGCTGCACTATGATTCAGAAGGCAACAAACTG...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACAGTTTGTTGCCTTCTaGATCATAGTGCAGCATTCG +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEQFVAF*IIVQHS
Trigger: CGAATGCTGCACTATGATTCAGAAGGCAACAAACTG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGGCGGATGGATCACTTaGGGTCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKGGWIT*GQEFET
Trigger: AGTCTCGAACTCCTGACCTCAAGTGATCCATCCGCC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTCCCCTGCAAAAGCCTaGAGATCAAGGCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHSPAKA*RSRPRR
Trigger: TCTGCGAGGCCTTGATCTGCAGGCTTTTGCAGGGGA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACATACTCTGGAAAGTTaGAGCCGCCACTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKHTLES*SRHCRR
Trigger: TCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCATACTCTGGAAAGTTaGAGCCGCCACTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHHTLES*SRHCRR
Trigger: TCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTGCATGGGTCCTCTGGTaGAAAACTGTCATTGTTCGT +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFAWVLW*KTVIVR
Trigger: ACGAACAATGACAGTTTTGCACCAGAGGACCCATGC...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAATGCTCAGAAACTCGTaGTTGTCATCTCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEMLRNS*LSSPSQ
Trigger: TTGGCTTGGAGATGACAAGCACGAGTTTCTGAGCAT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACCAAAGGCGCCCACATaGAAAGCGCGCGTATTTAGC +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKPKAPT*KARVFS
Trigger: GCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACAATTCACCACCAATCTaGAGGTCACTGACACATCGA +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHNSPPI*RSLTHR
Trigger: TCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATT...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAAATTCACCACCAATCTaGAGGTCACTGACACATCGA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLENSPPI*RSLTHR
Trigger: TCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGATGTGCTCAGGGGCTTaGTCAGGAGTGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLMCSGA*SGVLLN
Trigger: ATTCAGCAACACTCCTGACCAAGCCCCTGAGCACAT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGAAGCATGGGTCCTCTaGTGCAAAACTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQEAWVL*CKTVIV
Trigger: AACAATGACAGTTTTGCACCAGAGGACCCATGCTTC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCAATCTGGAGGTCACTaGCACATCGAATTGAATCCC +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLQSGGH*HIELNP
Trigger: GGGATTCAATTCGATGTGTCAGTGACCTCCAGATTG...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACTCTATCATGGGACTCTaGCCACTCAATGATAGTTCT +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHSIMGL*PLNDSS
Trigger: AGAACTATCATTGAGTGGTCAGAGTCCCATGATAGA...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATCTATCATGGGACTCTaGCCACTCAATGATAGTTCT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLESIMGL*PLNDSS
Trigger: AGAACTATCATTGAGTGGTCAGAGTCCCATGATAGA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTTCCAAGCAGTCATCATaGTGCACAAGCCTTATGTCA +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFSKQSS*CTSLMS
Trigger: TGACATAAGGCTTGTGCATCATGATGACTGCTTGGA...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACTGAGGTTAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKLRLGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTAACCTCAG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACTCCCCTGCAAAAGCCTaGAGATCAAGGCCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDSPAKA*RSRPRR
Trigger: TCTGCGAGGCCTTGATCTGCAGGCTTTTGCAGGGGA...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKRSLLM*SGAWSG
Trigger: TCCTGACCAAGCCCCTGAGCACATCAGCAAAGACCT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAATTCCCCCAGTTTGTTaGCTTCTGAATCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEIPPVC*LLNHSA
Trigger: TGCACTATGATTCAGAAGGCAACAAACTGGGGGAAT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCATACCAGAAACTCGTaGTTGTCATCTCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFHTRNS*LSSPSQ
Trigger: TTGGCTTGGAGATGACAAGCACGAGTTTCTGGTATG...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGGGAAGCTCATACTCTaGAAAGTTGCAGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHGKLIL*KVAAAT
Trigger: AGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACTCCGGAATGACTTCTaGATCCTCACCGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKLRNDF*ILTVLK
Trigger: CTTGAGGACGGTGAGGATCCAGAAGTCATTCCGGAG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCTCCGGAATGACTTCTaGATCCTCACCGTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHLRNDF*ILTVLK
Trigger: CTTGAGGACGGTGAGGATCCAGAAGTCATTCCGGAG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGATCCTGTTCCTCAGTaGCGTTTCTTAGAAATAAGG +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQDPVPQ*RFLEIR
Trigger: CCTTATTTCTAAGAAACGCCACTGAGGAACAGGATC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGATCCTGTTCCTCAGTaGCGTTTCTTAGAAATAAGG +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEDPVPQ*RFLEIR
Trigger: CCTTATTTCTAAGAAACGCCACTGAGGAACAGGATC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGCGGACTGTTCAAAGTaGATCCTGTTCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHADCSK*ILFLSG
Trigger: GCCACTGAGGAACAGGATCCACTTTGAACAGTCCGC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAAGGGAAGGCATGGATTaGGAGAAAGAATATGTGTGT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEREGMD*EKEYVC
Trigger: ACACACATATTCTTTCTCCCAATCCATGCCTTCCCT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
3UTR CAA 72 bp TACATAACACACGGGCAAACTGTGGGAGTAACCTGGTaGATTAACTTTTCTCCTCAGTTTCACCAGGGAACA +
Preference number: 4 (lower is better)
Translates to: YITHGQTVGVTW*INFSPQFHQGT
Trigger: TGTTCCCTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATACAGTATTCTCCGGAATaGCTTCTGGATCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIQYSPE*LLDPHR
Trigger: ACGGTGAGGATCCAGAAGTCATTCCGGAGAATACTG...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCAGTATTCTCCGGAATaGCTTCTGGATCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHQYSPE*LLDPHR
Trigger: ACGGTGAGGATCCAGAAGTCATTCCGGAGAATACTG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCAGTTGTGTGAGTTTTTaGCTGCCCAACACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCSCVSF*LPNTSI
Trigger: AATGCTGGTGTTGGGCAGTCAAAAACTCACACAACT...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCAATCCCTCAGTTGTGTaGGTTTTTGACTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCNPSVV*VFDCPT
Trigger: TGTTGGGCAGTCAAAAACTCACACAACTGAGGGATT...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGACTGACACATCGAATTaGATCCCTCAGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLTDTSN*IPQLCE
Trigger: CTCACACAACTGAGGGATTCAATTCGATGTGTCAGT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGGTCAGGAGTGTTGCTaGATTCACCACCAATCTGGA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHGQECC*IHHQSG
Trigger: TCCAGATTGGTGGTGAATTCAGCAACACTCCTGACC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTGTATAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHCIGLC*CAQGLG
Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTATACA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACCATACTCTGGAAAGTTaGAGCCGCCACTGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYHTLES*SRHCRR
Trigger: TCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATG...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTGGTCACAGAGGTTGTaGTGTTTTGGGAAACGGGGT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHWSQRL*CFGKRG
Trigger: ACCCCGTTTCCCAAAACAGCACAACCTCTGTGACCA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCAATTCACCACCAATCTaGAGGTCACTGACACATCGA +
Preference number: 4 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCNSPPI*RSLTHR
Trigger: TCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATT...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACATGTGCTCAGGGGCTTaGTCAGGAGTGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHMCSGA*SGVLLN
Trigger: ATTCAGCAACACTCCTGACCAAGCCCCTGAGCACAT...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACGCGGACTGTTCAAAGTaGATCCTGTTCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDADCSK*ILFLSG
Trigger: GCCACTGAGGAACAGGATCCACTTTGAACAGTCCGC...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACGAAGAATGGAAGACCTaGGCCAGGAAAACTTATTTT +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHEEWKT*ARKTYF
Trigger: AAAATAAGTTTTCCTGGCCCAGGTCTTCCATTCTTC...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGACTGTGGGAGTAACCTaGTTGATTAACTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQTVGVT*LINFSP
Trigger: AGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGT...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTACTGACACATCGAATTaGATCCCTCAGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TESVNENTRHTRNSCLSSTDTSN*IPQLCE
Trigger: CTCACACAACTGAGGGATTCAATTCGATGTGTCAGT...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACAATCTGGAGGTCACTaGCACATCGAATTGAATCCC +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKQSGGH*HIELNP
Trigger: GGGATTCAATTCGATGTGTCAGTGACCTCCAGATTG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACTGTATAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDCIGLC*CAQGLG
Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTATACA...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR TCA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCTCTATCATGGGACTCTaGCCACTCAATGATAGTTCT +
Preference number: 4 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCSIMGL*PLNDSS
Trigger: AGAACTATCATTGAGTGGTCAGAGTCCCATGATAGA...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCAATCAATAGGATCTTaGTTTTTCCATGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFQSIGS*FFHVPT
Trigger: TGTGGGGACATGGAAAAATCAAGATCCTATTGATTG...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGTTAGGAATTTCTTTTaGCTTGAACTTGGTGGGATA +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQVRNFF*LELGGI
Trigger: TATCCCACCAAGTTCAAGTCAAAAGAAATTCCTAAC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ACACACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTAGGTTGACATGTTCATaGCAACATTTTCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: THGQTVGVTWLINFSPQFRLTCS*QHFQLP
Trigger: AGGCAACTGAAAATGTTGTCATGAACATGTCAACCT...AAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGAATGGTGTCATAGGCTaGTTTACAGATAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQNGVIG*FTDNFS
Trigger: TGAGAAGTTATCTGTAAATCAGCCTATGACACCATT...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGAGGTCTTTGCTGATGTaGTCAGGGGCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLRSLLM*SGAWSG
Trigger: TCCTGACCAAGCCCCTGAGCACATCAGCAAAGACCT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACTGGTCCATAGCCAATaGTTCTTGATAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKLVHSQ*FLIRRG
Trigger: TCCCCTCCTTATCAAGAAGCATTGGCTATGGACCAG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGCATGGGTCCTCTGGTaGAAAACTGTCATTGTTCGT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHAWVLW*KTVIVR
Trigger: ACGAACAATGACAGTTTTGCACCAGAGGACCCATGC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGAGAAGACAGTATTTTTaGTGCTCCCAAGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLRRQYF*CSQAKL
Trigger: CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGGGAAGCTCATACTCTaGAAAGTTGCAGCCGCCACT +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLGKLIL*KVAAAT
Trigger: AGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGCAGCATTGTTTGGTATaGTTTGTGTTCTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQQHCLV*FVFFVL
Trigger: AAGCACAAAGAACACAAACCATACCAAACAATGCTG...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACAGCATTGTTTGGTATaGTTTGTGTTCTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEQHCLV*FVFFVL
Trigger: AAGCACAAAGAACACAAACCATACCAAACAATGCTG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGAACACCAGCATTGTTTaGTATGGTTTGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQNTSIV*YGLCSL
Trigger: CAAAGAACACAAACCATACCAAACAATGCTGGTGTT...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACATGTGCTCAGGGGCTTaGTCAGGAGTGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDMCSGA*SGVLLN
Trigger: ATTCAGCAACACTCCTGACCAAGCCCCTGAGCACAT...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATGTTCGTCACCCATCTaGCTGTATACATTTTACAAA +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLECSSPI*LYTFYK
Trigger: TTTGTAAAATGTATACAGCCAGATGGGTGACGAACA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACAATTTCTTAGTTAACTaGTCACAGAGGTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHNFLVN*SQRLCC
Trigger: ACAGCACAACCTCTGTGACCAGTTAACTAAGAAATT...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACAATCCCTCAGTTGTGTaGGTTTTTGACTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHNPSVV*VFDCPT
Trigger: TGTTGGGCAGTCAAAAACTCACACAACTGAGGGATT...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAATCCCTCAGTTGTGTaGGTTTTTGACTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKNPSVV*VFDCPT
Trigger: TGTTGGGCAGTCAAAAACTCACACAACTGAGGGATT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACACTGACACATCGAATTaGATCCCTCAGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHTDTSN*IPQLCE
Trigger: CTCACACAACTGAGGGATTCAATTCGATGTGTCAGT...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACTGACACATCGAATTaGATCCCTCAGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKTDTSN*IPQLCE
Trigger: CTCACACAACTGAGGGATTCAATTCGATGTGTCAGT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGGTCAGGAGTGTTGCTaGATTCACCACCAATCTGGA +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYGQECC*IHHQSG
Trigger: TCCAGATTGGTGGTGAATTCAGCAACACTCCTGACC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACTGTATAGGTCTTTGCTaGTGTGCTCAGGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYCIGLC*CAQGLG
Trigger: ACCAAGCCCCTGAGCACATCAGCAAAGACCTATACA...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTCCAAGCAGTCATCATaGTGCACAAGCCTTATGTCA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHSKQSS*CTSLMS
Trigger: TGACATAAGGCTTGTGCATCATGATGACTGCTTGGA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCAGTTTGTTGCCTTCTaGATCATAGTGCAGCATTCG +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHQFVAF*IIVQHS
Trigger: CGAATGCTGCACTATGATTCAGAAGGCAACAAACTG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTTACCGGAGAATAAGTaGGCCAGAGCTAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHLPENK*ARASNQ
Trigger: TTGATTGCTAGCTCTGGCTCACTTATTCTCCGGTAA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATTCTGCTCAAATCTCTaGATTCTGGGTATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEFCSNL*ILGIFY
Trigger: ATAAAAGATACCCAGAATGCAGAGATTTGAGCAGAA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGGCTCCCAAGCCAAGTTaGAATGGTTATTACTTTTAC +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLAPKPS*NGYYFY
Trigger: GTAAAAGTAATAACCATTGCAACTTGGCTTGGGAGC...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAATGGCCAGAAAAAGGATaGTCAGAAACTCGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKWPEKG*SETRAC
Trigger: ACAAGCACGAGTTTCTGAGCATCCTTTTTCTGGCCA...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAATTCACCACCAATCTaGAGGTCACTGACACATCGA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKNSPPI*RSLTHR
Trigger: TCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGATGTGCTCAGGGGCTTaGTCAGGAGTGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLMCSGA*SGVLLN
Trigger: ATTCAGCAACACTCCTGACCAAGCCCCTGAGCACAT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGAAGCATGGGTCCTCTaGTGCAAAACTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKEAWVL*CKTVIV
Trigger: AACAATGACAGTTTTGCACCAGAGGACCCATGCTTC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGAAGCATGGGTCCTCTaGTGCAAAACTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHEAWVL*CKTVIV
Trigger: AACAATGACAGTTTTGCACCAGAGGACCCATGCTTC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTAGGGAAGGCATGGATTaGGAGAAAGAATATGTGTGT +
Preference number: 4 (lower is better)
Translates to: TESVNENTRHTRNSCLSSREGMD*EKEYVC
Trigger: ACACACATATTCTTTCTCCCAATCCATGCCTTCCCT...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAGAAAGTTTATTTTGCTaGGCGCTGTGGTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIESLFC*ALWFMP
Trigger: AGGCATGAACCACAGCGCCCAGCAAAATAAACTTTC...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGGAGGATGCAAATGGATaGAAAGAGTTGGTATTTGCA +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLEDANG*KELVFA
Trigger: TGCAAATACCAACTCTTTCCATCCATTTGCATCCTC...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTCTATCATGGGACTCTaGCCACTCAATGATAGTTCT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHSIMGL*PLNDSS
Trigger: AGAACTATCATTGAGTGGTCAGAGTCCCATGATAGA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR TCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAGGATACCTGTATAACTaGTACATAACACACGGGCAA +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIGYLYN*YITHGQ
Trigger: TTGCCCGTGTGTTATGTATCAGTTATACAGGTATCC...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCTTGCTCTAACTAGTTaGTGTATGTTCGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHLALTS*CMFASS
Trigger: GCTTGAAGCGAACATACATCAACTAGTTAGAGCAAG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGCTCCCTTTCTTCCCATaGCCCACCAGATCTATAGTT +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLLPFFP*PTRSIV
Trigger: AACTATAGATCTGGTGGGTCATGGGAAGAAAGGGAG...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGCATGGGTCCTCTGGTaGAAAACTGTCATTGTTCGT +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLAWVLW*KTVIVR
Trigger: ACGAACAATGACAGTTTTGCACCAGAGGACCCATGC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAATTCCCCCAGTTTGTTaGCTTCTGAATCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKIPPVC*LLNHSA
Trigger: TGCACTATGATTCAGAAGGCAACAAACTGGGGGAAT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGACAAAATGTCTTAAGTaGTGTCACCTACCTTATGTC +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLTKCLK*CHLPYV
Trigger: GACATAAGGTAGGTGACAGCACTTAAGACATTTTGT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR GCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACATGCTCAGAAACTCGTaGTTGTCATCTCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDMLRNS*LSSPSQ
Trigger: TTGGCTTGGAGATGACAAGCACGAGTTTCTGAGCAT...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACGAAGCATGGGTCCTCTaGTGCAAAACTGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDEAWVL*CKTVIV
Trigger: AACAATGACAGTTTTGCACCAGAGGACCCATGCTTC...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAGGGAAGGCATGGATTaGGAGAAAGAATATGTGTGT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKREGMD*EKEYVC
Trigger: ACACACATATTCTTTCTCCCAATCCATGCCTTCCCT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCAAGCCAAGTTGCAATaGTTATTACTTTTACTCCTC +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLQAKLQ*LLLLLL
Trigger: GAGGAGTAAAAGTAATAACCATTGCAACTTGGCTTG...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGATGGATGGAAAGAGTTaGTATTTGCATGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLMDGKS*YLHGKK
Trigger: CTTCTTTCCATGCAAATACCAACTCTTTCCATCCAT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
3UTR CAA 72 bp ACTTTCAGGATCATTGAAATTGTTCATTGGCTCAATTaGTGTGTGTGGTCAAAACTCCACAGCTTGACAAGG +
Preference number: 4 (lower is better)
Translates to: TFRIIEIVHWLN*CVWSKLHSLTR
Trigger: CCTTGTCAAGCTGTGGAGTTTTGACCACACACACAAATTGAGCCAATGAACAATTTCAATGATCCTGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR TCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGAATCCCTCAGTTGTGTaGGTTTTTGACTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLNPSVV*VFDCPT
Trigger: TGTTGGGCAGTCAAAAACTCACACAACTGAGGGATT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGCAGTTTGTTGCCTTCTaGATCATAGTGCAGCATTCG +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLQFVAF*IIVQHS
Trigger: CGAATGCTGCACTATGATTCAGAAGGCAACAAACTG...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAGAATTTCTTTTGACTTaGACTTGGTGGGATACCTGT +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIEFLLT*TWWDTC
Trigger: ACAGGTATCCCACCAAGTTCAAGTCAAAAGAAATTC...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACAAAGGGCTTGGTCCATaGCACTTTGCTGAGTTATTT +
Preference number: 4 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDKGLGP*HFAELF
Trigger: AAATAACTCAGCAAAGTGTCATGGACCAAGCCCTTT...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR GCA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCTTCTGCTCAAATCTCTaGATTCTGGGTATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCFCSNL*ILGIFY
Trigger: ATAAAAGATACCCAGAATGCAGAGATTTGAGCAGAA...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR GCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGGAAAGAGTTGGTATTTaGATGGAAAGAAGACAGTAT +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLERVGI*MERRQY
Trigger: ATACTGTCTTCTTTCCATGCAAATACCAACTCTTTC...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR GCA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGATGAACAATAGAGGATaGAAATGGATGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: VGICMERRQYFCCSQAKLMNNRG*KWMERV
Trigger: AACTCTTTCCATCCATTTGCATCCTCTATTGTTCAT...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CCA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTAACACCAGCATTGTTTaGTATGGTTTGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TESVNENTRHTRNSCLSSNTSIV*YGLCSL
Trigger: CAAAGAACACAAACCATACCAAACAATGCTGGTGTT...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACTGTGGGAGTAACCTaGTTGATTAACTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKTVGVT*LINFSP
Trigger: AGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
3UTR CAA 72 bp AAGAGTTGGTATTTGCATGGAAAGAAGACAGTATTTTaGCTGCTCCCAAGCCAAGTTGCAATGGTTATTACT +
Preference number: 4 (lower is better)
Translates to: KSWYLHGKKTVF*LLPSQVAMVIT
Trigger: AGTAATAACCATTGCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380799.1
3UTR CAA 72 bp GCTAGAAATGATGGAAAGGGCTTGGTCCATGACACTTaGCTGAGTTATTTTGCTTCATCTGCATATTACTTT +
Preference number: 4 (lower is better)
Translates to: ARNDGKGLVHDT*LSYFASSAYYF
Trigger: AAAGTAATATGCAGATGAAGCAAAATAACTCAGCAAAGTGTCATGGACCAAGCCCTTTCCATCATTTCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR TCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGGATACCTGTATAACTaGTACATAACACACGGGCAA +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYGYLYN*YITHGQ
Trigger: TTGCCCGTGTGTTATGTATCAGTTATACAGGTATCC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACATTCCCCCAGTTTGTTaGCTTCTGAATCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYIPPVC*LLNHSA
Trigger: TGCACTATGATTCAGAAGGCAACAAACTGGGGGAAT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAATGGAATTCTGGGTTTaGTGCCAAGGAAATAATTTC +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIMEFWV*CQGNNF
Trigger: GAAATTATTTCCTTGGCAGCAAACCCAGAATTCCAT...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACAGCATTGTTTGGTATaGTTTGTGTTCTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKQHCLV*FVFFVL
Trigger: AAGCACAAAGAACACAAACCATACCAAACAATGCTG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCAGCATTGTTTGGTATaGTTTGTGTTCTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHQHCLV*FVFFVL
Trigger: AAGCACAAAGAACACAAACCATACCAAACAATGCTG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAACACCAGCATTGTTTaGTATGGTTTGTGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKNTSIV*YGLCSL
Trigger: CAAAGAACACAAACCATACCAAACAATGCTGGTGTT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAATGTTCGTCACCCATCTaGCTGTATACATTTTACAAA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKCSSPI*LYTFYK
Trigger: TTTGTAAAATGTATACAGCCAGATGGGTGACGAACA...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTGTTCGTCACCCATCTaGCTGTATACATTTTACAAA +
Preference number: 4 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHCSSPI*LYTFYK
Trigger: TTTGTAAAATGTATACAGCCAGATGGGTGACGAACA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAAATCTATGGTTTGCTaGCAGTTATCAATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKKSMVC*QLSICS
Trigger: TGAGCAGATTGATAACTGCCAGCAAACCATAGATTT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGAATTTCTTTTGACTTaGACTTGGTGGGATACCTGT +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLEFLLT*TWWDTC
Trigger: ACAGGTATCCCACCAAGTTCAAGTCAAAAGAAATTC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACAACTACCAAGCAGGTTaGCATGTTCATGACAACATT +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYNYQAG*HVHDNI
Trigger: AATGTTGTCATGAACATGTCAACCTGCTTGGTAGTT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAATTCTGCTCAAATCTCTaGATTCTGGGTATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKFCSNL*ILGIFY
Trigger: ATAAAAGATACCCAGAATGCAGAGATTTGAGCAGAA...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR GCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATATTCTGCTCAAATCTCTaGATTCTGGGTATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIFCSNL*ILGIFY
Trigger: ATAAAAGATACCCAGAATGCAGAGATTTGAGCAGAA...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAATTAACATGTCTTGTATaGCTAGTTTCCTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKLTCLV*LVSSKT
Trigger: TGTTTTGGAGGAAACTAGGCATACAAGACATGTTAA...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR GCA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATATGGCAGTTATCAATCTaGTCAATTTTAGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIWQLSI*SILALL
Trigger: CAACAATGCTAAAATTGAGCAGATTGATAACTGCCA...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGTTAGGAATTTCTTTTaGCTTGAACTTGGTGGGATA +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYVRNFF*LELGGI
Trigger: TATCCCACCAAGTTCAAGTCAAAAGAAATTCCTAAC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR TCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACATTTACAAGAGTAAGTaGTGGAATTCTGGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYIYKSK*WNSGFA
Trigger: AGCAAACCCAGAATTCCATCACTTACTCTTGTAAAT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACAAATCTATGGTTTGCTaGCAGTTATCAATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYKSMVC*QLSICS
Trigger: TGAGCAGATTGATAACTGCCAGCAAACCATAGATTT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACTTCTGCTCAAATCTCTaGATTCTGGGTATCTTTTAT +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYFCSNL*ILGIFY
Trigger: ATAAAAGATACCCAGAATGCAGAGATTTGAGCAGAA...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTGGCAGTTATCAATCTaGTCAATTTTAGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLWQLSI*SILALL
Trigger: CAACAATGCTAAAATTGAGCAGATTGATAACTGCCA...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR GCA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGAATTCTGGGTTTGCTaGCAAGGAAATAATTTCTTA +
Preference number: 4 (lower is better)
Translates to: LKSMVCWQLSICSILALLEFWVC*QGNNFL
Trigger: TAAGAAATTATTTCCTTGGCAGCAAACCCAGAATTC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CCA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACATAACTCTCAAGAAATaGTGTCATAGGCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYITLKK*CHRLIY
Trigger: GTAAATCAGCCTATGACACCATTTCTTGAGAGTTAT...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS CCA 90 bp CCGCCCTCAGCTCAGCCGCCGCCTCCAGGCTGCAGTCCAGATCCCTaGCCACCGCGGCATCCTCCCGGTCGGAGTCAGCTGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: PPSAQPPPPGCSPDP*PPRHPPGRSQLPGS
Trigger: GGAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGGCTGAGCTGAGGGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 90 bp GTCCAGATCCCTGGCCACCGCGGCATCCTCCCGGTCGGAGTCAGCTaGCTGGCTCCCAGGCAGAGCGGATGCCGGCGGCTCCCTCAGCGA +
Preference number: 5 (lower is better)
Translates to: VQIPGHRGILPVGVS*LAPRQSGCRRLPQR
Trigger: TCGCTGAGGGAGCCGCCGGCATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 90 bp AGATCCCTGGCCACCGCGGCATCCTCCCGGTCGGAGTCAGCTGCCTaGCTCCCAGGCAGAGCGGATGCCGGCGGCTCCCTCAGCGACAAG +
Preference number: 5 (lower is better)
Translates to: RSLATAASSRSESAA*LPGRADAGGSLSDK
Trigger: CTTGTCGCTGAGGGAGCCGCCGGCATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 90 bp TCATACTCTGGAAAGTTGCAGCCGCCACTGCCGGAGACTGGGTCCTaGCTGCCACCCACCCCGCTACACGTAGGGCCACCTCGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: SYSGKLQPPLPETGS*LPPTPLHVGPPRLP
Trigger: AGGAAGCCGAGGTGGCCCTACGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 90 bp GGAAAGCGCGCGTATTTAGCTCGGGAAGCTCATACTCTGGAAAGTTaGAGCCGCCACTGCCGGAGACTGGGTCCTGCCTGCCACCCACCC +
Preference number: 5 (lower is better)
Translates to: GKRAYLAREAHTLES*SRHCRRLGPACHPP
Trigger: GGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGGAAGTTGTAGTTGCTaGGGGCGCCCGGCCGGCGAG +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEGSCSC*GRPAGE
Trigger: CTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTCC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGGAAGTTGTAGTTGCTaGGGGCGCCCGGCCGGCGAG +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHGSCSC*GRPAGE
Trigger: CTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTCC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATCATACTCTGGAAAGTaGCAGCCGCCACTGCCGGAG +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLESYSGK*QPPLPE
Trigger: CTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 90 bp TCTAACCCCCAAAGTCACCAGGTCAGTATTCTCCGGAATGACTTCTaGATCCTCACCGTCCTCAAGGCATTTCAGTTTATCAAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: SNPQSHQVSILRNDF*ILTVLKAFQFIKAA
Trigger: TGCGGCCTTGATAAACTGAAATGCCTTGAGGACGGTGAGGATCCAGAAGTCATTCCGGAGAATACTGACCTGGTGACTTTGGGGGTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000461041.1
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 90 bp TGCTCAGGGGCTTGGTCAGGAGTGTTGCTGAATTCACCACCAATCTaGAGGTCACTGACACATCGAATTGAATCCCTCAGTTGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: CSGAWSGVLLNSPPI*RSLTHRIESLSCVS
Trigger: ACTCACACAACTGAGGGATTCAATTCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGGAAGTTGTAGTTGCTaGGGGCGCCCGGCCGGCGAG +
Preference number: 5 (lower is better)
Translates to: LKSMVCWQLSICSILALLGSCSC*GRPAGE
Trigger: CTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTCC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CAA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATC +
Preference number: 5 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHAWSGV*LNSPPI
Trigger: GATTGGTGGTGAATTCAGCAACACTCCTGACCAAGC...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATC +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEAWSGV*LNSPPI
Trigger: GATTGGTGGTGAATTCAGCAACACTCCTGACCAAGC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGGATGTGCTCAGGGGCTaGGTCAGGAGTGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: VGICMERRQYFCCSQAKLDVLRG*VRSVAE
Trigger: TTCAGCAACACTCCTGACCAAGCCCCTGAGCACATC...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACTCAGAAACTCGTGCTaGTCATCTCCAAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLELRNSC*SSPSQW
Trigger: CCATTGGCTTGGAGATGACAAGCACGAGTTTCTGAG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467062.5
ENST00000610884.4
CDS TCA 90 bp GTTGCTGAATTCACCACCAATCTGGAGGTCACTGACACATCGAATTaGATCCCTCAGTTGTGTGAGTTTTTGACTGCCCAACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: VAEFTTNLEVTDTSN*IPQLCEFLTAQHQH
Trigger: ATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 90 bp GTGCAGCATTCGGAAGCAAACATCACAAAAGAAGCATGGGTCCTCTaGTGCAAAACTGTCATTGTTCGTCACCCATCTGGCTGTATACAT +
Preference number: 5 (lower is better)
Translates to: VQHSEANITKEAWVL*CKTVIVRHPSGCIH
Trigger: ATGTATACAGCCAGATGGGTGACGAACAATGACAGTTTTGCACCAGAGGACCCATGCTTCTTTTGTGATGTTTGCTTCCGAATGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAATCATACTCTGGAAAGTaGCAGCCGCCACTGCCGGAG +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKSYSGK*QPPLPE
Trigger: CTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGA...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAACAGTTGTGTGAGTTTTaGACTGCCCAACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEQLCEF*TAQHQH
Trigger: ATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTG...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGTTGTGTGAGTTTTaGACTGCCCAACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHQLCEF*TAQHQH
Trigger: ATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTG...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACGATTTGTATAGGTCTTaGCTGATGTGCTCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHDLYRS*LMCSGA
Trigger: AGCCCCTGAGCACATCAGCAAAGACCTATACAAATC...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAGATTTGTATAGGTCTTaGCTGATGTGCTCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEDLYRS*LMCSGA
Trigger: AGCCCCTGAGCACATCAGCAAAGACCTATACAAATC...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACTGCCCAACACCAGCATaGTTTGGTATGGTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHCPTPA*FGMVCV
Trigger: AACACAAACCATACCAAACAATGCTGGTGTTGGGCA...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAATGCCCAACACCAGCATaGTTTGGTATGGTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLECPTPA*FGMVCV
Trigger: AACACAAACCATACCAAACAATGCTGGTGTTGGGCA...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATC +
Preference number: 5 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCAWSGV*LNSPPI
Trigger: GATTGGTGGTGAATTCAGCAACACTCCTGACCAAGC...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAGATGTGCTCAGGGGCTaGGTCAGGAGTGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIDVLRG*VRSVAE
Trigger: TTCAGCAACACTCCTGACCAAGCCCCTGAGCACATC...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGATGTGCTCAGGGGCTaGGTCAGGAGTGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKDVLRG*VRSVAE
Trigger: TTCAGCAACACTCCTGACCAAGCCCCTGAGCACATC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGTCAAAACTCCACAGCTaGACAAGGCACCAAAAGGTA +
Preference number: 5 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQSKLHS*TRHQKV
Trigger: TACCTTTTGGTGCCTTGTCAAGCTGTGGAGTTTTGA...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS GCA 90 bp CAGCATTCGGAAGCAAACATCACAAAAGAAGCATGGGTCCTCTGGTaGAAAACTGTCATTGTTCGTCACCCATCTGGCTGTATACATTTT +
Preference number: 5 (lower is better)
Translates to: QHSEANITKEAWVLW*KTVIVRHPSGCIHF
Trigger: AAAATGTATACAGCCAGATGGGTGACGAACAATGACAGTTTTGCACCAGAGGACCCATGCTTCTTTTGTGATGTTTGCTTCCGAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCCAGTTGTGTGAGTTTTaGACTGCCCAACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCQLCEF*TAQHQH
Trigger: ATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTG...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATC +
Preference number: 5 (lower is better)
Translates to: TESVNENTRHTRNSCLSSAWSGV*LNSPPI
Trigger: GATTGGTGGTGAATTCAGCAACACTCCTGACCAAGC...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACGATGTGCTCAGGGGCTaGGTCAGGAGTGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDDVLRG*VRSVAE
Trigger: TTCAGCAACACTCCTGACCAAGCCCCTGAGCACATC...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CAA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCGATTTGTATAGGTCTTaGCTGATGTGCTCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCDLYRS*LMCSGA
Trigger: AGCCCCTGAGCACATCAGCAAAGACCTATACAAATC...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTGGTGCAAAACTGTCATaGTTCGTCACCCATCTGGCT +
Preference number: 5 (lower is better)
Translates to: TESVNENTRHTRNSCLSSGAKLS*FVTHLA
Trigger: AGCCAGATGGGTGACGAACAATGACAGTTTTGCACC...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGGCAATCAATAGGATCTaGATTTTTCCATGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQAINRI*IFPCPH
Trigger: GTGGGGACATGGAAAAATCAAGATCCTATTGATTGC...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CAA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGATAATTTATGTCAGCTaGTACAGGCTGACCTTGCTC +
Preference number: 5 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQIIYVS*YRLTLL
Trigger: GAGCAAGGTCAGCCTGTACAAGCTGACATAAATTAT...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS TCA 90 bp AGGTCACTGACACATCGAATTGAATCCCTCAGTTGTGTGAGTTTTTaGCTGCCCAACACCAGCATTGTTTGGTATGGTTTGTGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RSLTHRIESLSCVSF*LPNTSIVWYGLCSL
Trigger: CAAAGAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATGTGTCAGTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CACGGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACATAAACGAATGTTTCTaGTCTGCAGGCTCGATCTAT +
Preference number: 5 (lower is better)
Translates to: HGQTVGVTWLINFSPQFHINECF*SAGSIY
Trigger: ATAGATCGAGCCTGCAGACAAGAAACATTCGTTTAT...GTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCTTTAGCGGACTGTTCAAAGTGGATCCTGTTCCTCAGTGGCGTTTCTTAGAAATAAACGAATGTTTCTaGTCTGCAGGCTCGATCTAT +
Preference number: 5 (lower is better)
Translates to: SFSGLFKVDPVPQWRFLEINECF*SAGSIY
Trigger: ATAGATCGAGCCTGCAGACAAGAAACATTCGTTTAT...TTCTAAGAAACGCCACTGAGGAACAGGATCCACTTTGAACAGTCCGCTAAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATC +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHAWSGV*LNSPPI
Trigger: GATTGGTGGTGAATTCAGCAACACTCCTGACCAAGC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGGATGTGCTCAGGGGCTaGGTCAGGAGTGTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LKSMVCWQLSICSILALLDVLRG*VRSVAE
Trigger: TTCAGCAACACTCCTGACCAAGCCCCTGAGCACATC...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGGTGCAAAACTGTCATaGTTCGTCACCCATCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHGAKLS*FVTHLA
Trigger: AGCCAGATGGGTGACGAACAATGACAGTTTTGCACC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGGTGCAAAACTGTCATaGTTCGTCACCCATCTGGCT +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKGAKLS*FVTHLA
Trigger: AGCCAGATGGGTGACGAACAATGACAGTTTTGCACC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACACCAGAAACTCGTGCTaGTCATCTCCAAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHTRNSC*SSPSQW
Trigger: CCATTGGCTTGGAGATGACAAGCACGAGTTTCTGGT...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp GGGCAAACTGTGGGAGTAACCTGGTTGATTAACTTTTCTCCTCAGTTTCACCAGTCTTTTGACTTGAACTaGGTGGGATACCTGTATAAC +
Preference number: 5 (lower is better)
Translates to: GQTVGVTWLINFSPQFHQSFDLN*VGYLYN
Trigger: GTTATACAGGTATCCCACCAAGTTCAAGTCAAAAGA...CTGGTGAAACTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCACAGTTTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS GCA 90 bp TTCCAGGATCAACATAAGGATAAGCAAGGAATTCCCCCAGTTTGTTaGCTTCTGAATCATAGTGCAGCATTCGGAAGCAAACATCACAAA +
Preference number: 5 (lower is better)
Translates to: FQDQHKDKQGIPPVC*LLNHSAAFGSKHHK
Trigger: TTTGTGATGTTTGCTTCCGAATGCTGCACTATGATTCAGAAGGCAACAAACTGGGGGAATTCCTTGCTTATCCTTATGTTGATCCTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACAGTTGTGTGAGTTTTaGACTGCCCAACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKQLCEF*TAQHQH
Trigger: ATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGATTTGTATAGGTCTTaGCTGATGTGCTCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHDLYRS*LMCSGA
Trigger: AGCCCCTGAGCACATCAGCAAAGACCTATACAAATC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAGATTTGTATAGGTCTTaGCTGATGTGCTCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKDLYRS*LMCSGA
Trigger: AGCCCCTGAGCACATCAGCAAAGACCTATACAAATC...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTGTGATCCCAAAATTTaGGGAGGCTTAGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LKSMVCWQLSICSILALLCDPKI*GGLGGW
Trigger: CCACCCGCCTAAGCCTCCCAAAATTTTGGGATCACA...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CAA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCAAGAAGACAGTATTTTaGCTGCTCCCAAGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCKKTVF*LLPSQV
Trigger: AACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTT...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAAATGATGGAAAGGGCTaGGTCCATGACACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKNDGKG*VHDTLL
Trigger: CAGCAAAGTGTCATGGACCAAGCCCTTTCCATCATT...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CAA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATATGCCCAACACCAGCATaGTTTGGTATGGTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGICPTPA*FGMVCV
Trigger: AACACAAACCATACCAAACAATGCTGGTGTTGGGCA...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTGCCCAACACCAGCATaGTTTGGTATGGTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHCPTPA*FGMVCV
Trigger: AACACAAACCATACCAAACAATGCTGGTGTTGGGCA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp ACTGAATCAGTGAATGAGAACACTAGACATACCAGAAACTCGTGCTTGTCATCTCATAGCCAATGCTTCTaGATAAGGAGGGGATACAAT +
Preference number: 5 (lower is better)
Translates to: TESVNENTRHTRNSCLSSHSQCF*IRRGYN
Trigger: ATTGTATCCCCTCCTTATCAAGAAGCATTGGCTATG...AGATGACAAGCACGAGTTTCTGGTATGTCTAGTGTTCTCATTCACTGATTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGACCAGAAACTCGTGCTaGTCATCTCCAAGCCAATGG +
Preference number: 5 (lower is better)
Translates to: LKSMVCWQLSICSILALLTRNSC*SSPSQW
Trigger: CCATTGGCTTGGAGATGACAAGCACGAGTTTCTGGT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp ACTGGCATGTTTCTTCTTTGTCCGCTAAAATGTATTGACACCACACATGGAATAGTGGGAGTAACCTGGTaGATTAACTTTTCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: TGMFLLCPLKCIDTTHGIVGVTW*INFSPQ
Trigger: CTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCAC...TATTCCATGTGTGGTGTCAATACATTTTAGCGGACAAAGAAGAAACATGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp GTTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGTGCTCCCAAGCCAAGTaGCAATGGTTATTACTTTTA +
Preference number: 5 (lower is better)
Translates to: VGICMERRQYFCCSQAKLCSQAK*QWLLLL
Trigger: TAAAAGTAATAACCATTGCAACTTGGCTTGGGAGCA...CAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp TTGGTATTTGCATGGAAAGAAGACAGTATTTTTGCTGCTCCCAAGCCAAGTTGCGGAAAGAGTTGGTATTaGCATGGAAAGAAGACAGTA +
Preference number: 5 (lower is better)
Translates to: LVFAWKEDSIFAAPKPSCGKSWY*HGKKTV
Trigger: TACTGTCTTCTTTCCATGCAAATACCAACTCTTTCC...GCAACTTGGCTTGGGAGCAGCAAAAATACTGTCTTCTTTCCATGCAAATACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380799.1
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACCATAGCCAATGCTTCTaGATAAGGAGGGGATACAAT +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHHSQCF*IRRGYN
Trigger: ATTGTATCCCCTCCTTATCAAGAAGCATTGGCTATG...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACATAGCCAATGCTTCTaGATAAGGAGGGGATACAAT +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKHSQCF*IRRGYN
Trigger: ATTGTATCCCCTCCTTATCAAGAAGCATTGGCTATG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACGGAATTTCTTTTGACTaGAACTTGGTGGGATACCTG +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHGISFD*NLVGYL
Trigger: CAGGTATCCCACCAAGTTCAAGTCAAAAGAAATTCC...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACATAAACGAATGTTTCTaGTCTGCAGGCTCGATCTAT +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHINECF*SAGSIY
Trigger: ATAGATCGAGCCTGCAGACAAGAAACATTCGTTTAT...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS-3UTR CAA 90 bp TTAAAGAGAATTCACTTTTATGCTAGAAATGATGGAAAGGGCTTGGTCCATGACCATAGCCAATGCTTCTaGATAAGGAGGGGATACAAT +
Preference number: 5 (lower is better)
Translates to: LKRIHFYARNDGKGLVHDHSQCF*IRRGYN
Trigger: ATTGTATCCCCTCCTTATCAAGAAGCATTGGCTATG...GTCATGGACCAAGCCCTTTCCATCATTTCTAGCATAAAAGTGAATTCTCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CAA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGTGGGAGTAACCTGGTaGATTAACTTTTCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYVGVTW*INFSPQ
Trigger: CTGAGGAGAAAAGTTAATCAACCAGGTTACTCCCAC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTCTTTTGACTTGAACTaGGTGGGATACCTGTATAAC +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHSFDLN*VGYLYN
Trigger: GTTATACAGGTATCCCACCAAGTTCAAGTCAAAAGA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGAGAGGTTGTGCTGTTTaGGGAAACGGGGTAACTAAA +
Preference number: 5 (lower is better)
Translates to: LKSMVCWQLSICSILALLRGCAV*GNGVTK
Trigger: TTTAGTTACCCCGTTTCCCAAAACAGCACAACCTCT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CAA 90 bp AGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAAACACTTGGTCCATGACACTTaGCTGAGTTATTTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: SLMVEGVALTFFKEFSKHLVHDT*LSYFAS
Trigger: TGAAGCAAAATAACTCAGCAAAGTGTCATGGACCAA...GTGTTTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467062.5
CDS-3UTR CAA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGGAATTTCTTTTGACTaGAACTTGGTGGGATACCTG +
Preference number: 5 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYGISFD*NLVGYL
Trigger: CAGGTATCCCACCAAGTTCAAGTCAAAAGAAATTCC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACGTTCATTGGCTCAATTaGTGTGTGTGGTCAAAACTC +
Preference number: 5 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYVHWLN*CVWSKL
Trigger: GAGTTTTGACCACACACACAAATTGAGCCAATGAAC...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS-3UTR CAA 90 bp TGGAAGCCTCATGGTAGAAGGTGTAGCTCTCACATTCTTCAAAGAATTTTCAAACATCTGCATATTACTTaGGGAAGAAGATACAACATG +
Preference number: 5 (lower is better)
Translates to: WKPHGRRCSSHILQRIFKHLHIT*GRRYNM
Trigger: CATGTTGTATCTTCTTCCCAAAGTAATATGCAGATG...TTTGAAAATTCTTTGAAGAATGTGAGAGCTACACCTTCTACCATGAGGCTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467062.5
ENST00000610884.4
CDS-3UTR CAA 90 bp CTTAAATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGATAAACGAATGTTTCTaGTCTGCAGGCTCGATCTAT +
Preference number: 5 (lower is better)
Translates to: LKSMVCWQLSICSILALLINECF*SAGSIY
Trigger: ATAGATCGAGCCTGCAGACAAGAAACATTCGTTTAT...CAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGATTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380821.7
ENST00000490969.5
CDS-3UTR CAA 90 bp ATCTATGGTTTGCTGGCAGTTATCAATCTGCTCAATTTTAGCATTGTTGTATACTGTGTTACATGTAATTaGACAGGCGTGTTACATTTG +
Preference number: 5 (lower is better)
Translates to: IYGLLAVINLLNFSIVVYCVTCN*TGVLHL
Trigger: CAAATGTAACACGCCTGTCAAATTACATGTAACACA...GTATACAACAATGCTAAAATTGAGCAGATTGATAACTGCCAGCAAACCATAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380821.7
CDS GCA 72 bp CCTGGCCACCGCGGCATCCTCCCGGTCGGAGTCAGCTaGCTGGCTCCCAGGCAGAGCGGATGCCGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: PGHRGILPVGVS*LAPRQSGCRRL
Trigger: GAGCCGCCGGCATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp GCCACCGCGGCATCCTCCCGGTCGGAGTCAGCTGCCTaGCTCCCAGGCAGAGCGGATGCCGGCGGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: ATAASSRSESAA*LPGRADAGGSL
Trigger: GAGGGAGCCGCCGGCATCCGCTCTGCCTGGGAGCCAGGCAGCTGACTCCGACCGGGAGGATGCCGCGGTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp GCTCAGCCGCCGCCTCCAGGCTGCAGTCCAGATCCCTaGCCACCGCGGCATCCTCCCGGTCGGAGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: AQPPPPGCSPDP*PPRHPPGRSQL
Trigger: CAGCTGACTCCGACCGGGAGGATGCCGCGGTGGCCAGGGATCTGGACTGCAGCCTGGAGGCGGCGGCTGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 72 bp CAAGGCCTCGCAGAGCGTGATGGAAGTTGTAGTTGCTaGGGGCGCCCGGCCGGCGAGCGGCGAGGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: QGLAERDGSCSC*GRPAGERRGGA
Trigger: CGCGCCGCCTCGCCGCTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTCCATCACGCTCTGCGAGGCCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS GCA 72 bp GATCAAGGCCTCGCAGAGCGTGATGGAAGTTGTAGTTaGTTGGGGCGCCCGGCCGGCGAGCGGCGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: DQGLAERDGSCS*LGRPAGERRGG
Trigger: GCCGCCTCGCCGCTCGCCGGCCGGGCGCCCCAAGCAACTACAACTTCCATCACGCTCTGCGAGGCCTTGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000610884.4
CDS GCA 72 bp GGAAAGTTGCAGCCGCCACTGCCGGAGACTGGGTCCTaGCTGCCACCCACCCCGCTACACGTAGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: GKLQPPLPETGS*LPPTPLHVGPP
Trigger: AGGTGGCCCTACGTGTAGCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 72 bp CGGGAAGCTCATACTCTGGAAAGTTGCAGCCGCCACTaGCGGAGACTGGGTCCTGCCTGCCACCCACCCCGC +
Preference number: 6 (lower is better)
Translates to: REAHTLESCSRH*RRLGPACHPPR
Trigger: GCGGGGTGGGTGGCAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp AGACGGCCCCGCCACAGCTCCCCAAAGGCGCCCACATaGAAAGCGCGCGTATTTAGCTCGGGAAGCTCATAC +
Preference number: 6 (lower is better)
Translates to: RRPRHSSPKAPT*KARVFSSGSSY
Trigger: GTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCCATGTGGGCGCCTTTGGGGAGCTGTGGCGGGGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 90 bp TGGAAAGCGCGCGTATTTAGCTCGGGAAGCTCATACTCTGGAAAGTaGCAGCCGCCACTGCCGGAGACTGGGTCCTGCCTGCCACCCACC +
Preference number: 6 (lower is better)
Translates to: WKARVFSSGSSYSGK*QPPLPETGSCLPPT
Trigger: GGTGGGTGGCAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCGCGCTTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 72 bp GCGTATTTAGCTCGGGAAGCTCATACTCTGGAAAGTTaGAGCCGCCACTGCCGGAGACTGGGTCCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: AYLAREAHTLES*SRHCRRLGPAC
Trigger: GCAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 72 bp CGCGTATTTAGCTCGGGAAGCTCATACTCTGGAAAGTaGCAGCCGCCACTGCCGGAGACTGGGTCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: RVFSSGSSYSGK*QPPLPETGSCL
Trigger: CAGGCAGGACCCAGTCTCCGGCAGTGGCGGCTGCAACTTTCCAGAGTATGAGCTTCCCGAGCTAAATACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 72 bp TCTTTGCTGATGTGCTCAGGGGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATCTGGAGGTCACTGACA +
Preference number: 6 (lower is better)
Translates to: SLLMCSGAWSGV*LNSPPIWRSLT
Trigger: TGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCACATCAGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp GCTTGGTCAGGAGTGTTGCTGAATTCACCACCAATCTaGAGGTCACTGACACATCGAATTGAATCCCTCAGT +
Preference number: 6 (lower is better)
Translates to: AWSGVLLNSPPI*RSLTHRIESLS
Trigger: ACTGAGGGATTCAATTCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp TCGGAAGCAAACATCACAAAAGAAGCATGGGTCCTCTaGTGCAAAACTGTCATTGTTCGTCACCCATCTGGC +
Preference number: 6 (lower is better)
Translates to: SEANITKEAWVL*CKTVIVRHPSG
Trigger: GCCAGATGGGTGACGAACAATGACAGTTTTGCACCAGAGGACCCATGCTTCTTTTGTGATGTTTGCTTCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 90 bp TTGTATAGGTCTTTGCTGATGTGCTCAGGGGCTTGGTCAGGAGTGTaGCTGAATTCACCACCAATCTGGAGGTCACTGACACATCGAATT +
Preference number: 6 (lower is better)
Translates to: LYRSLLMCSGAWSGV*LNSPPIWRSLTHRI
Trigger: AATTCGATGTGTCAGTGACCTCCAGATTGGTGGTGAATTCAGCAACACTCCTGACCAAGCCCCTGAGCACATCAGCAAAGACCTATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 72 bp GAAGCAAACATCACAAAAGAAGCATGGGTCCTCTGGTaGAAAACTGTCATTGTTCGTCACCCATCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: EANITKEAWVLW*KTVIVRHPSGC
Trigger: ACAGCCAGATGGGTGACGAACAATGACAGTTTTGCACCAGAGGACCCATGCTTCTTTTGTGATGTTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp CAAAGTCACCAGGTCAGTATTCTCCGGAATGACTTCTaGATCCTCACCGTCCTCAAGGCATTTCAGTTTATC +
Preference number: 6 (lower is better)
Translates to: QSHQVSILRNDF*ILTVLKAFQFI
Trigger: GATAAACTGAAATGCCTTGAGGACGGTGAGGATCCAGAAGTCATTCCGGAGAATACTGACCTGGTGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380821.7
ENST00000421710.5
ENST00000461041.1
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CCA 72 bp GTGCAGCATTCGGAAGCAAACATCACAAAAGAAGCATaGGTCCTCTGGTGCAAAACTGTCATTGTTCGTCAC +
Preference number: 6 (lower is better)
Translates to: VQHSEANITKEA*VLWCKTVIVRH
Trigger: GTGACGAACAATGACAGTTTTGCACCAGAGGACCCATGCTTCTTTTGTGATGTTTGCTTCCGAATGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS TCA 72 bp TTCACCACCAATCTGGAGGTCACTGACACATCGAATTaGATCCCTCAGTTGTGTGAGTTTTTGACTGCCCAA +
Preference number: 6 (lower is better)
Translates to: FTTNLEVTDTSN*IPQLCEFLTAQ
Trigger: TTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATGTGTCAGTGACCTCCAGATTGGTGGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS TCA 72 bp ACACATCGAATTGAATCCCTCAGTTGTGTGAGTTTTTaGCTGCCCAACACCAGCATTGTTTGGTATGGTTTG +
Preference number: 6 (lower is better)
Translates to: THRIESLSCVSF*LPNTSIVWYGL
Trigger: CAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGATTCAATTCGATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS TCA 72 bp AGTCTGAAACTTTCCATAGCCTCTATCATGGGACTCTaGCCACTCAATGATAGTTCTGCTCAAATCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SLKLSIASIMGL*PLNDSSAQISA
Trigger: TGCAGAGATTTGAGCAGAACTATCATTGAGTGGTCAGAGTCCCATGATAGAGGCTATGGAAAGTTTCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380799.1
ENST00000380821.7
ENST00000421710.5
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS GCA 72 bp CAACATAAGGATAAGCAAGGAATTCCCCCAGTTTGTTaGCTTCTGAATCATAGTGCAGCATTCGGAAGCAAA +
Preference number: 6 (lower is better)
Translates to: QHKDKQGIPPVC*LLNHSAAFGSK
Trigger: TTTGCTTCCGAATGCTGCACTATGATTCAGAAGGCAACAAACTGGGGGAATTCCTTGCTTATCCTTATGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 90 bp ATCCCTCAGTTGTGTGAGTTTTTGACTGCCCAACACCAGCATTGTTaGGTATGGTTTGTGTTCTTTGTGCTTATGAAATATAACAGGGTA +
Preference number: 6 (lower is better)
Translates to: IPQLCEFLTAQHQHC*VWFVFFVLMKYNRV
Trigger: TACCCTGTTATATTTCATAAGCACAAAGAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAACTGAGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 90 bp TCCTCTTCTCTCACTAGTTCCCAGACTCAAAGGAGTTTCTCTAGTTaGTTTTCAACTAAGCATATCCAGTATAAAGCTACCATACTGTCA +
Preference number: 6 (lower is better)
Translates to: SSSLTSSQTQRSFSS*FSTKHIQYKATILS
Trigger: TGACAGTATGGTAGCTTTATACTGGATATGCTTAGTTGAAAACAAACTAGAGAAACTCCTTTGAGTCTGGGAACTAGTGAGAGAAGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461041.1
CDS CCA 72 bp GAGTTTTTGACTGCCCAACACCAGCATTGTTTGGTATaGTTTGTGTTCTTTGTGCTTATGAAATATAACAGG +
Preference number: 6 (lower is better)
Translates to: EFLTAQHQHCLV*FVFFVLMKYNR
Trigger: CCTGTTATATTTCATAAGCACAAAGAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4
CDS CAA 72 bp CTCACTAGTTCCCAGACTCAAAGGAGTTTCTCTAGTTaGTTTTCAACTAAGCATATCCAGTATAAAGCTACC +
Preference number: 6 (lower is better)
Translates to: LTSSQTQRSFSS*FSTKHIQYKAT
Trigger: GGTAGCTTTATACTGGATATGCTTAGTTGAAAACAAACTAGAGAAACTCCTTTGAGTCTGGGAACTAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461041.1
CDS CAA 72 bp TTGTGTGAGTTTTTGACTGCCCAACACCAGCATTGTTaGGTATGGTTTGTGTTCTTTGTGCTTATGAAATAT +
Preference number: 6 (lower is better)
Translates to: LCEFLTAQHQHC*VWFVFFVLMKY
Trigger: ATATTTCATAAGCACAAAGAACACAAACCATACCAAACAATGCTGGTGTTGGGCAGTCAAAAACTCACACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380821.7
ENST00000467062.5
ENST00000490969.5
ENST00000610884.4