RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMYD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000135632

Ensembl transcript IDs: ENST00000258100.8, ENST00000389501.9, ENST00000413491.5, ENST00000443900.1, ENST00000474652.1, ENST00000477038.1, ENST00000486518.1, ENST00000491204.1, ENST00000629411.2

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCTTaGTGGGCCAGTGGTCAAGCAGTTGCCTTACCAGCCACAGCTGTG +
Preference number: 1 (lower is better)
Translates to: REGAQDAQILLPASA*WASGQAVALPATAV
Trigger: CACAGCTGTGGCTGGTAAGGCAACTGCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR GCA 90 bp CAGGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTaGCCGCCTCTGCTTGCTGGGCCAGTGGTCAAGCAGTTGCCTTAC +
Preference number: 1 (lower is better)
Translates to: QETASGKGLRMPRSS*PPLLAGPVVKQLPY
Trigger: GTAAGGCAACTGCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 90 bp GAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCTTGCTaGGCCAGTGGTCAAGCAGTTGCCTTACCAGCCACAGCTGTGGTG +
Preference number: 1 (lower is better)
Translates to: EGAQDAQILLPASAC*ASGQAVALPATAVV
Trigger: CACCACAGCTGTGGCTGGTAAGGCAACTGCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR GCA 90 bp TGTGGGGTGGGCACCTGCCCTCTCTGGGATCCCTCAGCAGGAGAATaGAGCAGGCTCCTCCAGGAAAGGGAGGCATTGGGAGTGATGGGT +
Preference number: 1 (lower is better)
Translates to: CGVGTCPLWDPSAGE*SRLLQEREALGVMG
Trigger: ACCCATCACTCCCAATGCCTCCCTTTCCTGGAGGAGCCTGCTGCATTCTCCTGCTGAGGGATCCCAGAGAGGGCAGGTGCCCACCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 90 bp ATGGGGACAGTTCTGGTGGAGGTCTTTGCGCACAGTGCACAGCTCTaGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: MGTVLVEVFAHSAQL*VRQNLAWFPGQPLG
Trigger: GCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 90 bp GCTGGGCCAGTGGTCAAGCAGTTGCCTTACCAGCCACAGCTGTGGTaGGGGGAGGTGAGGACGCCTCACCACCTCCCATCTCTGCTTCAA +
Preference number: 1 (lower is better)
Translates to: AGPVVKQLPYQPQLW*GEVRTPHHLPSLLQ
Trigger: TTGAAGCAGAGATGGGAGGTGGTGAGGCGTCCTCACCTCCCCCCACCACAGCTGTGGCTGGTAAGGCAACTGCTTGACCACTGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR TCA 90 bp GGACAGTTCTGGTGGAGGTCTTTGCGCACAGTGCACAGCTCTGGGTaGGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTC +
Preference number: 1 (lower is better)
Translates to: GQFWWRSLRTVHSSG*GRTWPGFPVSLWAF
Trigger: GAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 90 bp GAGTCTGAGCCAACTCAGCAGCAGTGTCCAGGGCATGAGGTCTGGTaGGGGTTGGGGCCAGAGATCCAGGCTCTCTCCTACCCTCTAGCA +
Preference number: 1 (lower is better)
Translates to: ESEPTQQQCPGHEVW*GLGPEIQALSYPLA
Trigger: TGCTAGAGGGTAGGAGAGAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGGACACTGCTGCTGAGTTGGCTCAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 90 bp GCAGAGTCTGAGCCAACTCAGCAGCAGTGTCCAGGGCATGAGGTCTaGTGGGGGTTGGGGCCAGAGATCCAGGCTCTCTCCTACCCTCTA +
Preference number: 1 (lower is better)
Translates to: AESEPTQQQCPGHEV*WGLGPEIQALSYPL
Trigger: TAGAGGGTAGGAGAGAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGGACACTGCTGCTGAGTTGGCTCAGACTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 90 bp GAAGGAGTAAGAACCCAATGGGTAAGGGGCCAGACAGGTTTCACCTaGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCCC +
Preference number: 1 (lower is better)
Translates to: EGVRTQWVRGQTGFT*LHGPGKGLWGGHLP
Trigger: GGGCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCCCCTTACCCATTGGGTTCTTACTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR GCA 90 bp CTGGGAGGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTaGCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGG +
Preference number: 1 (lower is better)
Translates to: LGGAWAQDLVVLLSG*QPTFCTAVHHLAMG
Trigger: CCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR GCA 90 bp TCACTTGGCAATGGGGACAGTTCTGGTGGAGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCA +
Preference number: 1 (lower is better)
Translates to: SLGNGDSSGGGLCAQ*TALGEAEPGLVSRS
Trigger: TGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 90 bp CTCCTACCCTCTAGCAGAGAGGGCTGGAATGGGGAAAGCAGGCAATaGGAGTGGGAAGTTCCCTCCAAGCCACTTCTCTGGGGGAAGAGC +
Preference number: 1 (lower is better)
Translates to: LLPSSREGWNGESRQ*EWEVPSKPLLWGKS
Trigger: GCTCTTCCCCCAGAGAAGTGGCTTGGAGGGAACTTCCCACTCCCATTGCCTGCTTTCCCCATTCCAGCCCTCTCTGCTAGAGGGTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 90 bp CATCCTGGGAGGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTaGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAAT +
Preference number: 1 (lower is better)
Translates to: HPGRGLGTGPGGIAQ*LPTDILHCSTSLGN
Trigger: ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCTCCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR GCA 90 bp TGCAGTACATCACTTGGCAATGGGGACAGTTCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTT +
Preference number: 1 (lower is better)
Translates to: CSTSLGNGDSSGGGL*AQCTALGEAEPGLV
Trigger: AACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 90 bp AGGCCTGTCAAGCCCCAGGTCTCAGCCATGCTGCTGAGTGCTCATTaGGAAGCAGGTGTGAGAAAGGGTGATGACCCACTATGTGTCCCT +
Preference number: 1 (lower is better)
Translates to: RPVKPQVSAMLLSAH*EAGVRKGDDPLCVP
Trigger: AGGGACACATAGTGGGTCATCACCCTTTCTCACACCTGCTTCCCAATGAGCACTCAGCAGCATGGCTGAGACCTGGGGCTTGACAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR TCA 90 bp CAGGAGAATGCAGCAGGCTCCTCCAGGAAAGGGAGGCATTGGGAGTaGTGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGAGAGGG +
Preference number: 1 (lower is better)
Translates to: QENAAGSSRKGRHWE*WVVIPIASNPRVRG
Trigger: CCCTCTCACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCTTTCCTGGAGGAGCCTGCTGCATTCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR GCA 90 bp CGCCTGCTTCACTGTGGCCACCATCCTAGCCATCAACATGATGCTTaGAGTCTCAGGTGGGTAGTGAATACTCCTCCATGCCTCCTGAAG +
Preference number: 1 (lower is better)
Translates to: RLLHCGHHPSHQHDA*SLRWVVNTPPCLLK
Trigger: CTTCAGGAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGGATGGTGGCCACAGTGAAGCAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR CCA 90 bp GACAGGGCTACTCTCGAAGTATCTAGCCCAGCTCCTCGAGGTTTCTaGAAGACTTCAATGTTAGTCTGTGGAGACCCTAAAGATGGAGAT +
Preference number: 1 (lower is better)
Translates to: DRATLEVSSPAPRGF*KTSMLVCGDPKDGD
Trigger: ATCTCCATCTTTAGGGTCTCCACAGACTAACATTGAAGTCTTCCAGAAACCTCGAGGAGCTGGGCTAGATACTTCGAGAGTAGCCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTCCAGGGCATGAGGTCTaGTGGGGGTTGGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: GDSLREGAQDAQILLPASPGHEV*WGLGPE
Trigger: CTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGG...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCCAGCCACAGCTGTGGTaGGGGGAGGTGAGGACGCCT +
Preference number: 2 (lower is better)
Translates to: QVSPGSMVQERACGVGTCQPQLW*GEVRTP
Trigger: AGGCGTCCTCACCTCCCCCCACCACAGCTGTGGCTG...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCAGGTCTGGTGGGGGTTaGGGCCAGAGATCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: ARQVSPGSMVQERACGVGRSGGG*GQRSRL
Trigger: GAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCT...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGCCTCAGGTGAAGGGGTaGGTATGGGCCGTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: YSIRPATVPGPERQGTSLPQVKG*VWAVGP
Trigger: CGGCCCCACGGCCCATACTCACCCCTTCACCTGAGG...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCGGGAGAAGCCTCAGGTaGAGGGGTGAGTATGGGCCG +
Preference number: 2 (lower is better)
Translates to: RQVSPGSMVQERACGVGTGRSLR*RGEYGP
Trigger: CGGCCCATACTCACCCCTTCACCTGAGGCTTCTCCC...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGGGTGAGTATGGGCCGTaGGGCCGAGGGGAAGAAACA +
Preference number: 2 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGGEYGP*GRGEET
Trigger: TGTTTCTTCCCCTCGGCCCCACGGCCCATACTCACC...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CAA 90 bp GAGCCAACTCAGCAGCAGTGTCCAGGGCATGAGGTCTGGTGGGGGTaGGGGCCAGAGATCCAGGCTCTCTCCTACCCTCTAGCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: EPTQQQCPGHEVWWG*GPEIQALSYPLAER
Trigger: CCTCTCTGCTAGAGGGTAGGAGAGAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGGACACTGCTGCTGAGTTGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCTGCCAGTGCAGAGTCTaGGCCAACTCAGCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: ARQVSPGSMVQERACGVGCQCRV*ANSAAV
Trigger: CACTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCA...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCAGGGGAGGCCAGTTGTaGAAGGCTCAGTGCCAGTGC +
Preference number: 2 (lower is better)
Translates to: RQVSPGSMVQERACGVGTRGGQL*KAQCQC
Trigger: GCACTGGCACTGAGCCTTTCACAACTGGCCTCCCCT...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCAGGAGAGCCCCTCACTaGCCCATTTTAACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: QVSPGSMVQERACGVGTCRRAPH*PILTGP
Trigger: GGGGCCAGTTAAAATGGGTCAGTGAGGGGCTCTCCT...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp GAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTAGGCAGAACCTGGCCTaGTTTCCCGGTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: EAEPGLVSRSASGHSPLPRQNLA*FPGQPL
Trigger: CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT...AGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp GGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCGGGCACAGGACCTGGTaGTATTGCTCAGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: GAWAQDLVVLLSGCQPTFGHRTW*YCSVAA
Trigger: GGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCC...GAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR TCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGTCTCAGCCATGCTGCTaGGTGCTCATTGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGSQPCC*VLIGKQ
Trigger: CTGCTTCCCAATGAGCACTCAGCAGCATGGCTGAGA...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp GGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: GAWAQDLVVLLSGCQPTFGLCAQ*TALGEA
Trigger: TGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACC...GAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCGTCCAAATGGGGGTGTaGGTGGGGGAAGTAATCCCC +
Preference number: 2 (lower is better)
Translates to: RQVSPGSMVQERACGVGTVQMGV*VGEVIP
Trigger: GGGGATTACTTCCCCCACCCACACCCCCATTTGGAC...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CAA 90 bp CAAGGGGTCATCCTGGGAGGGGCCTGGGCACAGGACCTGGTGGTATaGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCAC +
Preference number: 2 (lower is better)
Translates to: QGVILGGAWAQDLVV*LSGCQPTFCTAVHH
Trigger: GTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCTCCCAGGATGACCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR TCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTAAATCAACAGCAAGTTaGGAGGGGAGAAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: GDSLREGAQDAQILLPASKSTAS*EGRSLR
Trigger: CCTGAGGCTTCTCCCCTCTCAACTTGCTGTTGATTT...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCCAGTGGTCAAGCAGTTaGCTTACCAGCCACAGCTGT +
Preference number: 2 (lower is better)
Translates to: QVSPGSMVQERACGVGTCQWSSS*LTSHSC
Trigger: ACAGCTGTGGCTGGTAAGGCAACTGCTTGACCACTG...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCCCTCCTGCCCGCCTCTaGTTGCTGGGCCAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAPPARL*LLGQWS
Trigger: TGACCACTGGCCCAGCAAGCAGAGGCGGGCAGGAGG...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCAGCCATGCTGCTGAGTaGTCATTGGGAAGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: QVSPGSMVQERACGVGTCSHAAE*SLGSRC
Trigger: ACACCTGCTTCCCAATGAGCACTCAGCAGCATGGCT...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTACCACCTCCCATCTCTaGTTCAATGAACTCGGTCTT +
Preference number: 2 (lower is better)
Translates to: GDSLREGAQDAQILLPASTTSHL*FNELGL
Trigger: AAGACCGAGTTCATTGAAGCAGAGATGGGAGGTGGT...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGCTGCCCGCCTCTGCTTaGTGGGCCAGTGGTCAAGCA +
Preference number: 2 (lower is better)
Translates to: GWERSADRCEGVRTQWVRLPASA*WASGQA
Trigger: TGCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAG...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCCACTGTGCCAGGTCCTaGGAGGCAAGGCACGAGTCT +
Preference number: 2 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAHCARS*EARHES
Trigger: AGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTG...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCGGGAGGCATTGGGAGTaGTGGGTTGTAATTCCCATA +
Preference number: 2 (lower is better)
Translates to: RQVSPGSMVQERACGVGTGRHWE*WVVIPI
Trigger: TATGGGAATTACAACCCATCACTCCCAATGCCTCCC...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp GGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTACATCACTTGGCAATaGGGACAGTTCTGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GAWAQDLVVLLSGCQPTFYITWQ*GQFWWR
Trigger: CCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTA...GAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCCCCGCCTCTGCTTGCTaGGCCAGTGGTCAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAPASAC*ASGQAV
Trigger: AACTGCTTGACCACTGGCCCAGCAAGCAGAGGCGGG...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp GGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCCAACCGACATTCTaGACTGCAGTACATCACTTG +
Preference number: 2 (lower is better)
Translates to: GAWAQDLVVLLSGCQPTFCQPTF*TAVHHL
Trigger: CAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCA...GAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp GCAAAGAGAGACCGGAATCCATCTGGAGTGAACCACTGGCTGACTGCTTCCTCAAGGCAGAACCTGGCCTaGTTTCCCGGTCAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: AKRDRNPSGVNHWLTASSRQNLA*FPGQPL
Trigger: CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT...TGAGGAAGCAGTCAGCCAGTGGTTCACTCCAGATGGATTCCGGTCTCTCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR CCA 90 bp ACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTCCTGGGCACAGGACCTaGTGGTATTGCTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: TGPGGIAQWLPTDILHCSPGHRT*WYCSVA
Trigger: AGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGG...ACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp CTGCTTCACTGTGGCCACCATCCTAGCCATCAACATGATGCTTGCAGTCTCAGGTTCCCGGTCAGCCTCTaGGCATTCTCCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LLHCGHHPSHQHDACSLRFPVSL*AFSSAF
Trigger: GAAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAA...CCTGAGACTGCAAGCATCATGTTGATGGCTAGGATGGTGGCCACAGTGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR CCA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGCCTCAAACCCTAGAGTaGAGGAACCTCAAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GWERSADRCEGVRTQWVRPQTLE*RNLKGR
Trigger: CCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGG...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CAA 90 bp CCCTCAGCAGGAGAATGCAGCAGGCTCCTCCAGGAAAGGGAGGCATaGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGT +
Preference number: 2 (lower is better)
Translates to: PSAGECSRLLQEREA*GVMGCNSHSIQPKS
Trigger: ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCTTTCCTGGAGGAGCCTGCTGCATTCTCCTGCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR TCA 90 bp GGAGGTCTTTGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTGACACAACAATATCTTaGGAGCAGAGGCCACATCTA +
Preference number: 2 (lower is better)
Translates to: GGLCAQCTALGEAEPGLVDTTIS*EQRPHL
Trigger: TAGATGTGGCCTCTGCTCTCAAGATATTGTTGTGTC...AACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413491.5
3UTR-3UTR GCA 90 bp TGGTCCCGATTCCTTGGCCATTGGTCCCAACAAGAGCAAAGAGAGACCGGAATCGAACCACTGGCTGACTaGTTCCTCATAGAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: WSRFLGHWSQQEQRETGIEPLAD*FLIEGL
Trigger: GAGGCCCTCTATGAGGAAGCAGTCAGCCAGTGGTTC...GATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR CCA 90 bp TTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGTTCCCGGTCAGCCTCTaGGCATTCTCCTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LLSGCQPTFCTAVHHLAMFPVSL*AFSSAF
Trigger: GAAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAA...CATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGGGGAAAGCAGGCAATaGGAGTGGGAAGTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: REALGVMGCNSHSIQPKSGESRQ*EWEVPS
Trigger: GGAGGGAACTTCCCACTCCCATTGCCTGCTTTCCCC...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCCTGACCCATTTTAACTaGCCCCAGGAATACCAGAGC +
Preference number: 2 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLALTHFN*PQEYQS
Trigger: GCTCTGGTATTCCTGGGGCCAGTTAAAATGGGTCAG...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR GCA 90 bp ATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATTCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: IAQWLPTDILHCSTSLGNSGGGL*AQCTAL
Trigger: CAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGA...ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp ACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCTGGGAGCTTGCAGTCTCAGGTaGGTAGTGAATACTCCTCCA +
Preference number: 2 (lower is better)
Translates to: TPPCLLKLIERMQGVILGACSLR*VVNTPP
Trigger: TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGC...TCCCAGGATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR TCA 90 bp TGGTCCCGATTCCTTGGCCATTGGTCCCAACAAGAGCAAAGAGAGACCGGAATCGTTCCAGTTGGCCCTTaGATTTGTCTCCCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: WSRFLGHWSQQEQRETGIVPVGP*ICLPEV
Trigger: AACTTCTGGGAGACAAATTCAAGGGCCAACTGGAAC...GATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR GCA 90 bp AGGTGGGTAGTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAATCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: RWVVNTPPCLLKLIERMQSGGGL*AQCTAL
Trigger: CAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGA...TTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCACTACCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR GCA 90 bp CATCAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCATGCCTCAGCTTATTGAGAGGATaGAAGGGGTCATCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: HQHDACSLRWVVNTPPCLSLLRG*KGSSWE
Trigger: CTCCCAGGATGACCCCTTGCATCCTCTCAATAAGCT...GAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CCA 90 bp CTCCCAGAAGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTTGTTACAAAGGGCACAGGACCTGGTaGTATTGCTCAGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LPEVYGQFPPLHWLFCYKGHRTW*YCSVAA
Trigger: GGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCC...TTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACTTCTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR GCA 90 bp CCCAGAAGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTTGTTACAAAACGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: PRSLWTISSSSLAVLLQNGLCAQ*TALGEA
Trigger: TGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACC...GTTTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACTTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR CCA 90 bp CTCCCAGAAGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTTGTTACAAAGGTGGTATTGCTCAGTaGCTGCCAACCGACATTCTG +
Preference number: 2 (lower is better)
Translates to: LPEVYGQFPPLHWLFCYKGGIAQ*LPTDIL
Trigger: CAGAATGTCGGTTGGCAGCCACTGAGCAATACCACC...TTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACTTCTGGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR CAA 90 bp TCTCCCAGAAGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTaGTTACAAAACTGGGAAAAGAGTCTGATCCAACGGTCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: SPRSLWTISSSSLAV*LQNWEKSLIQRSLS
Trigger: GGACAAGGACCGTTGGATCAGACTCTTTTCCCAGTTTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACTTCTGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR CCA 72 bp CACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTaGGCACCTGCCCTCTCTGGGATCCCTCAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: HLAPWSRKGPVG*APALSGIPQQE
Trigger: CTCCTGCTGAGGGATCCCAGAGAGGGCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp GGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTaGGGTGGGCACCTGCCCTCTCTGGGATCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: GFTWLHGPGKGL*GGHLPSLGSLS
Trigger: GCTGAGGGATCCCAGAGAGGGCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp GAGCCAACTCAGCAGCAGTGTCCAGGGCATGAGGTCTaGTGGGGGTTGGGGCCAGAGATCCAGGCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: EPTQQQCPGHEV*WGLGPEIQALS
Trigger: GGAGAGAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGGACACTGCTGCTGAGTTGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp CACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTaGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: HSAQLWVRQNLA*FPGQPLGILLC
Trigger: GCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 72 bp CCAACTCAGCAGCAGTGTCCAGGGCATGAGGTCTGGTaGGGGTTGGGGCCAGAGATCCAGGCTCTCTCCTAC +
Preference number: 3 (lower is better)
Translates to: PTQQQCPGHEVW*GLGPEIQALSY
Trigger: GTAGGAGAGAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGGACACTGCTGCTGAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp GTGGTCAAGCAGTTGCCTTACCAGCCACAGCTGTGGTaGGGGGAGGTGAGGACGCCTCACCACCTCCCATCT +
Preference number: 3 (lower is better)
Translates to: VVKQLPYQPQLW*GEVRTPHHLPS
Trigger: AGATGGGAGGTGGTGAGGCGTCCTCACCTCCCCCCACCACAGCTGTGGCTGGTAAGGCAACTGCTTGACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp CAGGATGCCCAGATCCTCCTGCCCGCCTCTGCTTGCTaGGCCAGTGGTCAAGCAGTTGCCTTACCAGCCACA +
Preference number: 3 (lower is better)
Translates to: QDAQILLPASAC*ASGQAVALPAT
Trigger: TGTGGCTGGTAAGGCAACTGCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAGGAGGATCTGGGCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CAA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGCCTGCCCGCCTCTGCTaGCTGGGCCAGTGGTCAAGC +
Preference number: 3 (lower is better)
Translates to: GWERSADRCEGVRTQWVRPARLC*LGQWSS
Trigger: GCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAGG...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp GCCCTGGCCCTGATTCCAGCCCCTCAAACCCTAGAGTaGAGGAACCTCAAGGGGAGGCCAGTTGTGAAAGGC +
Preference number: 3 (lower is better)
Translates to: ALALIPAPQTLE*RNLKGRPVVKG
Trigger: GCCTTTCACAACTGGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp AGAACCCAATGGGTAAGGGGCCAGACAGGTTTCACCTaGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGG +
Preference number: 3 (lower is better)
Translates to: RTQWVRGQTGFT*LHGPGKGLWGG
Trigger: CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCCCCTTACCCATTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR-3UTR CAA 90 bp GGAGGTCTTTGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTTCTGGTGGAGGTCTTaGCGCACAGTGCACAGCTCT +
Preference number: 3 (lower is better)
Translates to: GGLCAQCTALGEAEPGLVFWWRS*RTVHSS
Trigger: AGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAA...AACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR GCA 72 bp AATGGGGACAGTTCTGGTGGAGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: NGDSSGGGLCAQ*TALGEAEPGLV
Trigger: AACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CAA 90 bp GCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTaGGCAATGGGGACAGTTCTG +
Preference number: 3 (lower is better)
Translates to: AWAQDLVVLLSGCQPTFCTAVHH*AMGTVL
Trigger: CAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGT...GCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CAA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGAGGTCTGGTGGGGGTaGGGGCCAGAGATCCAGGCT +
Preference number: 3 (lower is better)
Translates to: REALGVMGCNSHSIQPKSEVWWG*GPEIQA
Trigger: AGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTC...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR GCA 72 bp TCACTTGGCAATGGGGACAGTTCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTGGGTGAGGCAGAACCT +
Preference number: 3 (lower is better)
Translates to: SLGNGDSSGGGL*AQCTALGEAEP
Trigger: AGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR GCA 72 bp GCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTaGCAACCGACATTCTGCACTGCAGTACATCACTTG +
Preference number: 3 (lower is better)
Translates to: AWAQDLVVLLSG*QPTFCTAVHHL
Trigger: CAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 72 bp GCACTGCAGTACATCACTTGGCAATGGGGACAGTTCTaGTGGAGGTCTTTGCGCACAGTGCACAGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: ALQYITWQWGQF*WRSLRTVHSSG
Trigger: CCCAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR-3UTR CAA 90 bp GCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCAGACACAACAATATCTaGAGAGCAGAGGCCACATCT +
Preference number: 3 (lower is better)
Translates to: AWAQDLVVLLSGCQPTFCRHNNI*RAEATS
Trigger: AGATGTGGCCTCTGCTCTCAAGATATTGTTGTGTCT...GCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413491.5
3UTR GCA 72 bp CTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTaGACTGCAGTACATCACTTGGCAATGGGGACAGTT +
Preference number: 3 (lower is better)
Translates to: LVVLLSGCQPTF*TAVHHLAMGTV
Trigger: AACTGTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR GCA 72 bp CACTGTGGCCACCATCCTAGCCATCAACATGATGCTTaGAGTCTCAGGTGGGTAGTGAATACTCCTCCATGC +
Preference number: 3 (lower is better)
Translates to: HCGHHPSHQHDA*SLRWVVNTPPC
Trigger: GCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGGATGGTGGCCACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR CCA 72 bp GGTCCCAACAAGAGCAAAGAGAGACCGGAATCCATCTaGAGTGAACCACTGGCTGACTGCTTCCTCATAGAG +
Preference number: 3 (lower is better)
Translates to: GPNKSKERPESI*SEPLADCFLIE
Trigger: CTCTATGAGGAAGCAGTCAGCCAGTGGTTCACTCCAGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR-3UTR CAA 90 bp GTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCTTCTGGTGGAGGTCTTaGCGCACAGTGCACAGCTCT +
Preference number: 3 (lower is better)
Translates to: VNTPPCLLKLIERMQGVIFWWRS*RTVHSS
Trigger: AGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAA...GATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
3UTR CCA 72 bp CATCCTAGCCATCAACATGATGCTTGCAGTCTCAGGTaGGTAGTGAATACTCCTCCATGCCTCCTGAAGCTT +
Preference number: 3 (lower is better)
Translates to: HPSHQHDACSLR*VVNTPPCLLKL
Trigger: AAGCTTCAGGAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR TCA 72 bp TCAATGTTAGTCTGTGGAGACCCTAAAGATGGAGATTaGGGCCAGGAGAGCCCCTCACTGACCCATTTTAAC +
Preference number: 3 (lower is better)
Translates to: SMLVCGDPKDGD*GQESPSLTHFN
Trigger: GTTAAAATGGGTCAGTGAGGGGCTCTCCTGGCCTCAATCTCCATCTTTAGGGTCTCCACAGACTAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
3UTR CCA 72 bp ACTCTCGAAGTATCTAGCCCAGCTCCTCGAGGTTTCTaGAAGACTTCAATGTTAGTCTGTGGAGACCCTAAA +
Preference number: 3 (lower is better)
Translates to: TLEVSSPAPRGF*KTSMLVCGDPK
Trigger: TTTAGGGTCTCCACAGACTAACATTGAAGTCTTCCAGAAACCTCGAGGAGCTGGGCTAGATACTTCGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGGCGGCTGTGGCGGCTaGGCTCCCGCTGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASGGCGG*APADSS
Trigger: ACTGCTGTCAGCGGGAGCGCAGCCGCCACAGCCGCC...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGGAAGGGGCTCAGGATaGCCAGATCCTCCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASGRGSG*PDPPAR
Trigger: GCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCC...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCCAGCCACAGCTGTGGTaGGGGGAGGTGAGGACGCCT +
Preference number: 4 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCQPQLW*GEVRTP
Trigger: AGGCGTCCTCACCTCCCCCCACCACAGCTGTGGCTG...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTCCAGGAAAGGGCCTGTaGGGTGGGCACCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASPGKGL*GGHLPS
Trigger: AGAGGGCAGGTGCCCACCCCACAGGCCCTTTCCTGG...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCCCTCAGGTGAAGGGGTaGGTATGGGCCGTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPDSSPSNPRVEEPQGEAPQVKG*VWAVGP
Trigger: CGGCCCCACGGCCCATACTCACCCCTTCACCTGAGG...GGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCTCCCTGAGGATCTTGTaGCGGCTGTGGCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCSLRIL*RLWRLR
Trigger: GCGCAGCCGCCACAGCCGCCACAAGATCCTCAGGGA...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCCAGGGCATGAGGTCTaGTGGGGGTTGGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGPGHEV*WGLGPE
Trigger: CTCTGGCCCCAACCCCCACCAGACCTCATGCCCTGG...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCCTCCTGCCCGCCTCTaGTTGCTGGGCCAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTPPARL*LLGQWS
Trigger: TGACCACTGGCCCAGCAAGCAGAGGCGGGCAGGAGG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCTGTGGGGTGGGCACCTaGCCTCTCTGGGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGCGVGT*PLWDPS
Trigger: TGAGGGATCCCAGAGAGGGCAGGTGCCCACCCCACA...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTAGCTGCTCACGGTCCTaGGGCTTCAACTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASSCSRS*GFNSRV
Trigger: CACTCTGGAGTTGAAGCCTCAGGACCGTGAGCAGCT...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGAGGGGAGGCCAGTTGTaGAAGGCTCAGTGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGRGGQL*KAQCQC
Trigger: GCACTGGCACTGAGCCTTTCACAACTGGCCTCCCCT...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCAGGCAGAACCTGGCCTaGTTTCCCGGTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCRQNLA*FPGQPL
Trigger: CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCATCCTGGGAGGGGCCTaGGCACAGGACCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTILGGA*AQDLVV
Trigger: TACCACCAGGTCCTGTGCCCAGGCCCCTCCCAGGAT...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTATCCTGGGAGGGGCCTaGGCACAGGACCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: QCTALGEAEPGLVSRSASILGGA*AQDLVV
Trigger: TACCACCAGGTCCTGTGCCCAGGCCCCTCCCAGGAT...AGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCAGGTCTGGTGGGGGTTaGGGCCAGAGATCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTRSGGG*GQRSRL
Trigger: GAGCCTGGATCTCTGGCCCCAACCCCCACCAGACCT...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCGGTGAGTATGGGCCGTaGGGCCGAGGGGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGGEYGP*GRGEET
Trigger: TGTTTCTTCCCCTCGGCCCCACGGCCCATACTCACC...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCCCCGCCTCTGCTTGCTaGGCCAGTGGTCAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGPASAC*ASGQAV
Trigger: AACTGCTTGACCACTGGCCCAGCAAGCAGAGGCGGG...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGTCCAAATGGGGGTGTaGGTGGGGGAAGTAATCCCC +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASVQMGV*VGEVIP
Trigger: GGGGATTACTTCCCCCACCCACACCCCCATTTGGAC...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCCACTGTGCCAGGTCCTaGGAGGCAAGGCACGAGTCT +
Preference number: 4 (lower is better)
Translates to: GPDSSPSNPRVEEPQGEAHCARS*EARHES
Trigger: AGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTG...GGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCACAGCCCCTTTCCCTTaGCGCTGCTCACGAAACGGA +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCTAPFP*RCSRNG
Trigger: TCCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGT...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCTTCCCGGTCAGCCTCTaGGCATTCTCCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGFPVSL*AFSSAF
Trigger: GAAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAA...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGAGGCAGAACCTGGCCTaGTTTCCCGGTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GEAEPGLVSRSASGHSPLRQNLA*FPGQPL
Trigger: CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT...CAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGGCACAGGACCTGGTaGTATTGCTCAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SAQLWVRQNLAWFPGQPLGHRTW*YCSVAA
Trigger: GGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCC...CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCCTGGGCACAGGACCTaGTGGTATTGCTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGPGHRT*WYCSVA
Trigger: AGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGG...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGGGGGAAAGCAGGCAATaGGAGTGGGAAGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGGESRQ*EWEVPS
Trigger: GGAGGGAACTTCCCACTCCCATTGCCTGCTTTCCCC...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTCTCCTCCATGCCTCCTaGAGCTTATTGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASLLHAS*SLLRGC
Trigger: GCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAG...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCAGGAGAGCCCCTCACTaGCCCATTTTAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTRRAPH*PILTGP
Trigger: GGGGCCAGTTAAAATGGGTCAGTGAGGGGCTCTCCT...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGATTCCAGAGAAACTGTaGAGCCACCAGGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGIPEKL*SHQGPF
Trigger: GAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAAT...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGTCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGSGGGL*AQCTAL
Trigger: CAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGA...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCTCCTTGTCCTTCGCCTaGTTCACTGTGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCSLSFA*FTVATI
Trigger: GATGGTGGCCACAGTGAAGCAGGCGAAGGACAAGGA...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCGGGTTCATCAGCCTCTaGCAGGCATTTGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCGFISL*QAFGTG
Trigger: TCCTGTCCCAAATGCCTGGCAGAGGCTGATGAACCC...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCCTCATCCCCCAGCTCTaGATCTTCTGGCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGLIPQL*IFWLSF
Trigger: GAAGGAGAGCCAGAAGATGCAGAGCTGGGGGATGAG...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCACAGCCCCTTTCCCTTaGCGCTGCTCACGAAACGGA +
Preference number: 4 (lower is better)
Translates to: GAWAQDLVVLLSGCQPTFTAPFP*RCSRNG
Trigger: TCCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGT...GAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGAGAGTGTCACAGGCATaGACCCACTGGCTTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGRVSQA*THWLRE
Trigger: CTCCCTAAGCCAGTGGGTCCATGCCTGTGACACTCT...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCTTTCACCTGGCTCCATaGTCCAGGAAAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCFHLAP*SRKGPV
Trigger: CACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAA...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCTGGTTGCAGCAGCTCTaGAGCACAAAGAGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGWLQQL*STKRPD
Trigger: ATCTGGCCTCTTTGTGCTTCAGAGCTGCTGCAACCA...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCATTGGGAAGCAGGTGTaGGAAAGGGTGATGACCCAC +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCIGKQV*ERVMTH
Trigger: GTGGGTCATCACCCTTTCTCACACCTGCTTCCCAAT...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCCTAAAGATGGAGATTaGGGCCAGGAGAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTPKDGD*GQESPS
Trigger: TGAGGGGCTCTCCTGGCCTCAATCTCCATCTTTAGG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGCGCGCCTCCGCCTTATaGCCCTTAACCCCGCCTCGA +
Preference number: 4 (lower is better)
Translates to: AQWLPTDILHCSTSLGNGRASAL*PLTPPR
Trigger: TCGAGGCGGGGTTAAGGGTCATAAGGCGGAGGCGCG...CCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413491.5
CDS-3UTR GCA 90 bp TGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCACCTTTCCCTTGGCGCTaGTCACGAAACGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: CAQCTALGEAEPGLVSRSPFPWR*SRNGLP
Trigger: TGGAAGTCCGTTTCGTGAGCAGCGCCAAGGGAAAGG...TGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCGTATTGCTCAGTGGCTaGCAACCGACATTCTGCACT +
Preference number: 4 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCVLLSG*QPTFCT
Trigger: AGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATAC...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCAGCTTATTGAGAGGATaGAAGGGGTCATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AQLWVRQNLAWFPGQPLGSLLRG*KGSSWE
Trigger: CTCCCAGGATGACCCCTTGCATCCTCTCAATAAGCT...GCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCAGTGGTCAAGCAGTTaGCTTACCAGCCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGQWSSS*LTSHSC
Trigger: ACAGCTGTGGCTGGTAAGGCAACTGCTTGACCACTG...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGAGCCATGCTGCTGAGTaGTCATTGGGAAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGSHAAE*SLGSRC
Trigger: ACACCTGCTTCCCAATGAGCACTCAGCAGCATGGCT...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGTTCCCGGTCAGCCTCTaGGCATTCTCCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLGTGPGGIAQWLPTDILFPVSL*AFSSAF
Trigger: GAAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAA...CAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GTCTTTGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCCCTGGGCACAGGACCTaGTGGTATTGCTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VFAHSAQLWVRQNLAWFPPGHRT*WYCSVA
Trigger: AGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGG...GGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGAGACCGGAATCCATCTaGAGTGAACCACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGRPESI*SEPLAD
Trigger: GTCAGCCAGTGGTTCACTCCAGATGGATTCCGGTCT...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCCTTCTGAGGTCACATTaGGTTCATCAGCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCLLRSH*VHQPLP
Trigger: TGGCAGAGGCTGATGAACCCAATGTGACCTCAGAAG...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGAAAGGGCCTGTGGGGTaGGCACCTGCCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GWERSADRCEGVRTQWVRKGPVG*APALSG
Trigger: CCCAGAGAGGGCAGGTGCCCACCCCACAGGCCCTTT...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGTTCCAGTTGGCCCTTaGATTTGTCTCCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASVPVGP*ICLPEV
Trigger: AACTTCTGGGAGACAAATTCAAGGGCCAACTGGAAC...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGTGCCAGTGCAGAGTCTaGGCCAACTCAGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLCQCRV*ANSAAV
Trigger: CACTGCTGCTGAGTTGGCTCAGACTCTGCACTGGCA...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCGGGAGAAGCCTCAGGTaGAGGGGTGAGTATGGGCCG +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAGRSLR*RGEYGP
Trigger: CGGCCCATACTCACCCCTTCACCTGAGGCTTCTCCC...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGAAATCAACAGCAAGTTaGGAGGGGAGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGKSTAS*EGRSLR
Trigger: CCTGAGGCTTCTCCCCTCTCAACTTGCTGTTGATTT...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLGLCAQ*TALGEA
Trigger: TGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACC...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTCATCAACATGATGCTTaGAGTCTCAGGTGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASHQHDA*SLRWVV
Trigger: CACTACCCACCTGAGACTGCAAGCATCATGTTGATG...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp AGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTTTCCTTGTCCTTCGCCTaGTTCACTGTGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: RQNLAWFPGQPLGILLCLSLSFA*FTVATI
Trigger: GATGGTGGCCACAGTGAAGCAGGCGAAGGACAAGGA...AAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCAATGGGGACAGTTCTaGTGGAGGTCTTTGCGCACA +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTQWGQF*WRSLRT
Trigger: TGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGGCTTGCAGTCTCAGGTaGGTAGTGAATACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGACSLR*VVNTPP
Trigger: TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGC...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGCAGGCATGGACCCACTaGCTTAGGGAGCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GWERSADRCEGVRTQWVRQAWTH*LRELVP
Trigger: CGGGACCAGCTCCCTAAGCCAGTGGGTCCATGCCTG...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCCTGACCCATTTTAACTaGCCCCAGGAATACCAGAGC +
Preference number: 4 (lower is better)
Translates to: QVSPGSMVQERACGVGTCLTHFN*PQEYQS
Trigger: GCTCTGGTATTCCTGGGGCCAGTTAAAATGGGTCAG...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCAGACAGGTTTCACCTaGCTCCATGGTCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTQTGFT*LHGPGK
Trigger: CTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCTATCCTCCAGAGCAGTaGCATGCAAAAGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCYPPEQ*HAKGSC
Trigger: ACAACTTCCTTTTGCATGTCACTGCTCTGGAGGATA...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCTTCCTCTTCCTCTTCTaGGGTCACATTGGGTTCATC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGSMVQERACGVGFLFLF*GHIGFI
Trigger: GATGAACCCAATGTGACCTCAGAAGAGGAAGAGGAA...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTGTATTGCTCAGTGGCTaGCAACCGACATTCTGCACT +
Preference number: 4 (lower is better)
Translates to: EAEPGLVSRSASGHSPLPVLLSG*QPTFCT
Trigger: AGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATAC...AGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp CACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTTCCCGGTCAGCCTCTaGGCATTCTCCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: HRTWWYCSVAANRHSALQFPVSL*AFSSAF
Trigger: GAAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAA...CTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTACATCACTTGGCAATaGGGACAGTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTYITWQ*GQFWWR
Trigger: CCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTA...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCTGCAGTACATCACTTaGCAATGGGGACAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTLQYIT*QWGQFW
Trigger: CCAGAACTGTCCCCATTGCCAAGTGATGTACTGCAG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCGGGCACAGGACCTGGTaGTATTGCTCAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAGHRTW*YCSVAA
Trigger: GGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCC...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCCGCAGAAGTTCCAGTTaGCCCTTGAATTTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GPDSSPSNPRVEEPQGEARRSSS*PLNLSP
Trigger: GGGAGACAAATTCAAGGGCCAACTGGAACTTCTGCG...GGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGACTGGCTTAGGGAGCTaGTCCCGATTCCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLTGLGS*SRFLGH
Trigger: ATGGCCAAGGAATCGGGACCAGCTCCCTAAGCCAGT...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTATGTCCTTGTATAGCTaGTCAATGAAGGCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASMSLYS*SMKASS
Trigger: GCTTGACGCCTTCATTGACCAGCTATACAAGGACAT...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGGGGCAGGGCCCTTTCTaGGCAGGGCAACATCACACA +
Preference number: 4 (lower is better)
Translates to: GWERSADRCEGVRTQWVRGQGPF*AGQHHT
Trigger: TGTGTGATGTTGCCCTGCCCAGAAAGGGCCCTGCCC...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCGGCACCTGCCCTCTCTaGGATCCCTCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAGTCPL*DPSAGE
Trigger: TTCTCCTGCTGAGGGATCCCAGAGAGGGCAGGTGCC...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CACTTGGCAATGGGGACAGTTCTGGTGGAGGTCTTTGCGCACAGTGCACAGCTCAGTGCCCTAAGGCAGTaGTCACAGGCTGACGGTGAG +
Preference number: 4 (lower is better)
Translates to: HLAMGTVLVEVFAHSAQLSALRQ*SQADGE
Trigger: CTCACCGTCAGCCTGTGACCACTGCCTTAGGGCACT...GAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413491.5
CDS-3UTR TCA 90 bp AGCAAAGAGAGACCGGAATCCATCTGGAGTGAACCACTGGCTGACTGCTTCCTCTCTCCCCCTTCCGGATaGGCTGTGTGGCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: SKERPESIWSEPLADCFLSPPSG*AVWQTA
Trigger: GGCTGTTTGCCACACAGCTCATCCGGAAGGGGGAGA...GAGGAAGCAGTCAGCCAGTGGTTCACTCCAGATGGATTCCGGTCTCTCTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR TCA 90 bp AGGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTACTGGGAAAAGAGTCTaGTCCAACGGTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RGLGTGPGGIAQWLPTDITGKRV*SNGPCP
Trigger: AGGACAAGGACCGTTGGATCAGACTCTTTTCCCAGT...AATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR GCA 90 bp AGGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTAGCTTATTGAGAGGATaGAAGGGGTCATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGLGTGPGGIAQWLPTDISLLRG*KGSSWE
Trigger: CTCCCAGGATGACCCCTTGCATCCTCTCAATAAGCT...AATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCACCACCTCCCATCTCTaGTTCAATGAACTCGGTCTT +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTTTSHL*FNELGL
Trigger: AAGACCGAGTTCATTGAAGCAGAGATGGGAGGTGGT...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CCTAGCCATCAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCATGGAGGCCGCCATCTTaGGCGCGCCTCCGCCTTATG +
Preference number: 4 (lower is better)
Translates to: PSHQHDACSLRWVVNTPPWRPPS*ARLRLM
Trigger: CATAAGGCGGAGGCGCGCCCAAGATGGCGGCCTCCA...TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGACAGCCCCTTTCCCTTaGCGCTGCTCACGAAACGGA +
Preference number: 4 (lower is better)
Translates to: AQWLPTDILHCSTSLGNGTAPFP*RCSRNG
Trigger: TCCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGT...CCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTTTACATCACTTGGCAATaGGGACAGTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQNLAWFPGQPLGILLCLYITWQ*GQFWWR
Trigger: CCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTA...AAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCTTGCAGTCTCAGGTaGGTAGTGAATACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPGHRTWWYCSVAANRHSACSLR*VVNTPP
Trigger: TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGC...AGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCGATTCCTTGGCCATTaGTCCCAACAAGAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RQVSPGSMVQERACGVGTRFLGH*SQQEQR
Trigger: TCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGGTCCCGATTCCTTaGCCATTGGTCCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: PGHRTWWYCSVAANRHSALVPIP*PLVPTR
Trigger: TCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAG...TGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGAGGAGGTCTCTGCATTaGGCACACAACTGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLRRSLH*AHNCGC
Trigger: GCAACCACAGTTGTGTGCCCAATGCAGAGACCTCCT...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGGGAGTAAGAACCCAATaGGTAAGGGGCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLGVRTQ*VRGQTG
Trigger: ACCTGTCTGGCCCCTTACCCATTGGGTTCTTACTCC...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp CCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACCTCCTGAAGCTTATTaGGAGGATGCAAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PGHRTWWYCSVAANRHSAPPEAY*EDARGH
Trigger: ATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGG...TGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR TCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGACTGGGAAAAGAGTCTaGTCCAACGGTCCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLTGKRV*SNGPCP
Trigger: AGGACAAGGACCGTTGGATCAGACTCTTTTCCCAGT...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCCCTTTCCCTTGGCGCTaGTCACGAAACGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAPFPWR*SRNGLP
Trigger: TGGAAGTCCGTTTCGTGAGCAGCGCCAAGGGAAAGG...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp ACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTTCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGPGGIAQWLPTDILHCSSGGGL*AQCTAL
Trigger: CAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGA...ACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp CAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTGTGAATACTCCTCCATaGCTCCTGAAGCTTATTGAG +
Preference number: 4 (lower is better)
Translates to: QLWVRQNLAWFPGQPLGIVNTPP*LLKLIE
Trigger: CTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCAC...AATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GGAGGTCTTTGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTCATCAACATGATGCTTaGAGTCTCAGGTGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GGLCAQCTALGEAEPGLVHQHDA*SLRWVV
Trigger: CACTACCCACCTGAGACTGCAAGCATCATGTTGATG...AACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTTCCAGAGCAGTGACATaGAAAAGGAAGTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GDSLREGAQDAQILLPASSRAVT*KRKLFS
Trigger: AGAAAACAACTTCCTTTTGCATGTCACTGCTCTGGA...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTCTGCCCGCCTCTGCTTaGTGGGCCAGTGGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSLPASA*WASGQA
Trigger: TGCTTGACCACTGGCCCAGCAAGCAGAGGCGGGCAG...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp AGGTGGGTAGTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAATGGAGGCCGCCATCTTaGGCGCGCCTCCGCCTTATG +
Preference number: 4 (lower is better)
Translates to: RWVVNTPPCLLKLIERMQWRPPS*ARLRLM
Trigger: CATAAGGCGGAGGCGCGCCCAAGATGGCGGCCTCCA...TTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCACTACCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGGACACCTGGGCACAGGACCTaGTGGTATTGCTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGCQPTFCTAVHHLAMGTPGHRT*WYCSVA
Trigger: AGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGG...TGTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GTAGTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCTGGGAGGGGCCTaGGCACAGGACCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VVNTPPCLLKLIERMQGVILGGA*AQDLVV
Trigger: TACCACCAGGTCCTGTGCCCAGGCCCCTCCCAGGAT...GACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR TCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTTCTCCCCCTTCCGGATaGGCTGTGTGGCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSSPPSG*AVWQTA
Trigger: GGCTGTTTGCCACACAGCTCATCCGGAAGGGGGAGA...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp ATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATTCTCCCCCTTCCGGATaGGCTGTGTGGCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: IAQWLPTDILHCSTSLGNSPPSG*AVWQTA
Trigger: GGCTGTTTGCCACACAGCTCATCCGGAAGGGGGAGA...ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR TCA 90 bp AGGGGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTGACACAACAATATCTTaGGAGCAGAGGCCACATCTA +
Preference number: 4 (lower is better)
Translates to: RGLGTGPGGIAQWLPTDIDTTIS*EQRPHL
Trigger: TAGATGTGGCCTCTGCTCTCAAGATATTGTTGTGTC...AATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413491.5
CDS-3UTR GCA 90 bp AGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGGACAATTCCAGAGAAACTGTaGAGCCACCAGGGGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SGCQPTFCTAVHHLAMGTIPEKL*SHQGPF
Trigger: GAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAAT...TGTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCGTGAATACTCCTCCATaGCTCCTGAAGCTTATTGAG +
Preference number: 4 (lower is better)
Translates to: AWAQDLVVLLSGCQPTFCVNTPP*LLKLIE
Trigger: CTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCAC...GCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp CCTAGCCATCAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCAAGGCAGAACCTGGCCTaGTTTCCCGGTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSHQHDACSLRWVVNTPPRQNLA*FPGQPL
Trigger: CAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT...TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp CAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGGACCAATGGGGACAGTTCTaGTGGAGGTCTTTGCGCACA +
Preference number: 4 (lower is better)
Translates to: QWLPTDILHCSTSLGNGDQWGQF*WRSLRT
Trigger: TGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTG...GTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGGGTGGTATTGCTCAGTaGCTGCCAACCGACATTCTG +
Preference number: 4 (lower is better)
Translates to: GWERSADRCEGVRTQWVRGGIAQ*LPTDIL
Trigger: CAGAATGTCGGTTGGCAGCCACTGAGCAATACCACC...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp ATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGCACAGGACCTGGTaGTATTGCTCAGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IAQWLPTDILHCSTSLGNGHRTW*YCSVAA
Trigger: GGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCC...ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR TCA 90 bp ACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCTGGGACTCCTCCATGCCTCCTaGAGCTTATTGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: TPPCLLKLIERMQGVILGLLHAS*SLLRGC
Trigger: GCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAG...TCCCAGGATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GTAGTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VVNTPPCLLKLIERMQGVGLCAQ*TALGEA
Trigger: TGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACC...GACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp CCTAGCCATCAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCAGGTCTTTGCGCACAGTaGACAGCTCTGGGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PSHQHDACSLRWVVNTPPGLCAQ*TALGEA
Trigger: TGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACC...TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp TACTCCATAAGGCCAGCCACTGTGCCAGGTCCTGAGAGGCAAGGCACGAGTCTGAAGAAACTCTCCAGTTaGTGCCTCGATGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: YSIRPATVPGPERQGTSLKKLSS*CLDVLV
Trigger: TACAAGGACATCGAGGCAGCAACTGGAGAGTTTCTT...CAGACTCGTGCCTTGCCTCTCAGGACCTGGCACAGTGGCTGGCCTTATGGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCTGGAAAGGAGGTCTCTaGATTGGGCACACAACTGTG +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAWKGGL*IGHTTV
Trigger: CACAGTTGTGTGCCCAATGCAGAGACCTCCTTTCCA...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp TGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGCAATGGGGACAGTTCTaGTGGAGGTCTTTGCGCACA +
Preference number: 4 (lower is better)
Translates to: CSVAANRHSALQYITWQWQWGQF*WRSLRT
Trigger: TGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTG...CCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp CAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGGACCTGCAGTACATCACTTaGCAATGGGGACAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QWLPTDILHCSTSLGNGDLQYIT*QWGQFW
Trigger: CCAGAACTGTCCCCATTGCCAAGTGATGTACTGCAG...GTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp GTCCCAACAAGAGCAAAGAGAGACCGGAATCCATCTGGAGTGAACCACTGGCTGGGTGGTATTGCTCAGTaGCTGCCAACCGACATTCTG +
Preference number: 4 (lower is better)
Translates to: VPTRAKRDRNPSGVNHWLGGIAQ*LPTDIL
Trigger: CAGAATGTCGGTTGGCAGCCACTGAGCAATACCACC...CAGCCAGTGGTTCACTCCAGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCCTGCTGAGTGCTCATTaGGAAGCAGGTGTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLALLSAH*EAGVRK
Trigger: CTTTCTCACACCTGCTTCCCAATGAGCACTCAGCAG...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCCTTTCCCTTGGCGCTaGTCACGAAACGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: VNTPPCLLKLIERMQGVIPFPWR*SRNGLP
Trigger: TGGAAGTCCGTTTCGTGAGCAGCGCCAAGGGAAAGG...GATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp CATCAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCATGCCTCTCTGGTGGAGGTCTTTaGGCACAGTGCACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HQHDACSLRWVVNTPPCLSGGGL*AQCTAL
Trigger: CAGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGA...GAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp ATCACTTGGCAATGGGGACAGTTCTGGTGGAGGTCTTTGCGCACAGTGCACAGCTGCCAACCGACATTCTaGACTGCAGTACATCACTTG +
Preference number: 4 (lower is better)
Translates to: ITWQWGQFWWRSLRTVHSCQPTF*TAVHHL
Trigger: CAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCA...GCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCTGCCAACCGACATTCTaGACTGCAGTACATCACTTG +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLACQPTF*TAVHHL
Trigger: CAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCA...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp TATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAAGAACCACTGGCTGACTaGTTCCTCATAGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YCSVAANRHSALQYITWQEPLAD*FLIEGL
Trigger: GAGGCCCTCTATGAGGAAGCAGTCAGCCAGTGGTTC...TTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR GCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGAACCACTGGCTGACTaGTTCCTCATAGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSEPLAD*FLIEGL
Trigger: GAGGCCCTCTATGAGGAAGCAGTCAGCCAGTGGTTC...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CTGCTTCACTGTGGCCACCATCCTAGCCATCAACATGATGCTTGCAGTCTCAGGCTGCAGTACATCACTTaGCAATGGGGACAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLHCGHHPSHQHDACSLRLQYIT*QWGQFW
Trigger: CCAGAACTGTCCCCATTGCCAAGTGATGTACTGCAG...CCTGAGACTGCAAGCATCATGTTGATGGCTAGGATGGTGGCCACAGTGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR TCA 90 bp ATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATCTCCTCCATGCCTCCTaGAGCTTATTGAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: IAQWLPTDILHCSTSLGNLLHAS*SLLRGC
Trigger: GCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAG...ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR TCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCAGCAGTCCAAGTAGCTaGTACAAATTTCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLASSPSS*YKFPLL
Trigger: CAGGAGAGGAAATTTGTATCAGCTACTTGGACTGCT...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp ATCACTTGGCAATGGGGACAGTTCTGGTGGAGGTCTTTGCGCACAGTGCACAGCTCGGTAGCGATAAAGTaGATTCCAGAGAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: ITWQWGQFWWRSLRTVHSSVAIK*IPEKLC
Trigger: GCACAGTTTCTCTGGAATGCACTTTATCGCTACCGA...GCTGTGCACTGTGCGCAAAGACCTCCACCAGAACTGTCCCCATTGCCAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCTCGGTAGCGATAAAGTaGATTCCAGAGAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLASVAIK*IPEKLC
Trigger: GCACAGTTTCTCTGGAATGCACTTTATCGCTACCGA...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp GCTAATCTGGGGGTAGGAGGGGACAAGACAGGGCTACTCTCGAAGTATCTAGCCGTGAATACTCCTCCATaGCTCCTGAAGCTTATTGAG +
Preference number: 4 (lower is better)
Translates to: ANLGVGGDKTGLLSKYLAVNTPP*LLKLIE
Trigger: CTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCAC...GGCTAGATACTTCGAGAGTAGCCCTGTCTTGTCCCCTCCTACCCCCAGATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp AATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCTGAGAGCAGCTGCTATGTaGCAGGCACCATTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: NTPPCLLKLIERMQGVILRAAAM*QAPFSV
Trigger: TACCGAGAATGGTGCCTGGCACATAGCAGCTGCTCT...CAGGATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413491.5
CDS-3UTR CCA 90 bp ATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGTGGTATTGCTCAGTaGCTGCCAACCGACATTCTG +
Preference number: 4 (lower is better)
Translates to: IAQWLPTDILHCSTSLGNGGIAQ*LPTDIL
Trigger: CAGAATGTCGGTTGGCAGCCACTGAGCAATACCACC...ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp TGGCCATTGGTCCCAACAAGAGCAAAGAGAGACCGGAATCCATCTGGAGTGAACGCTTGCAGTCTCAGGTaGGTAGTGAATACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WPLVPTRAKRDRNPSGVNACSLR*VVNTPP
Trigger: TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGC...GTTCACTCCAGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CCA 90 bp ATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATAGACCGGAATCCATCTaGAGTGAACCACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: IAQWLPTDILHCSTSLGNRPESI*SEPLAD
Trigger: GTCAGCCAGTGGTTCACTCCAGATGGATTCCGGTCT...ATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CCA 90 bp GACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCGATTCCTTGGCCATTaGTCCCAACAAGAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DLVVLLSGCQPTFCTAVHRFLGH*SQQEQR
Trigger: TCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCG...ATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTCTGGTCCCGATTCCTTaGCCATTGGTCCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSLVPIP*PLVPTR
Trigger: TCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAG...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTCCTCCTGAAGCTTATTaGGAGGATGCAAGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSPPEAY*EDARGH
Trigger: ATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGG...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTTGTATAGCTGGTCAATaGAGGCGTCAAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSCIAGQ*RRQAAH
Trigger: GTGAGCAGCTTGACGCCTTCATTGACCAGCTATACA...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR TCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGGGAGGCATTGGGAGTaGTGGGTTGTAATTCCCATA +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSGRHWE*WVVIPI
Trigger: TATGGGAATTACAACCCATCACTCCCAATGCCTCCC...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp CAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCATGCCTCCTGTGCCAACCGACATTCTaGACTGCAGTACATCACTTG +
Preference number: 4 (lower is better)
Translates to: QHDACSLRWVVNTPPCLLCQPTF*TAVHHL
Trigger: CAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCA...CAGGAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp ATAGAGGGCCTCTGTGAAGAGTCTCCGCAGAAGTTCCAGTTGGCCCTTGAATTTGTATTGCTCAGTGGCTaGCAACCGACATTCTGCACT +
Preference number: 4 (lower is better)
Translates to: IEGLCEESPQKFQLALEFVLLSG*QPTFCT
Trigger: AGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATAC...AAATTCAAGGGCCAACTGGAACTTCTGCGGAGACTCTTCACAGAGGCCCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR GCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTAGCTTATTGAGAGGATaGAAGGGGTCATCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSSLLRG*KGSSWE
Trigger: CTCCCAGGATGACCCCTTGCATCCTCTCAATAAGCT...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR GCA 90 bp CAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCATGCCTCCTGCATCAACATGATGCTTaGAGTCTCAGGTGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: QHDACSLRWVVNTPPCLLHQHDA*SLRWVV
Trigger: CACTACCCACCTGAGACTGCAAGCATCATGTTGATG...CAGGAGGCATGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR GCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGCACACAACTGTGGTTaGAGCAGCTCTGAAGCACAA +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSAHNCG*SSSEAQ
Trigger: TTGTGCTTCAGAGCTGCTGCAACCACAGTTGTGTGC...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp GTGAATACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCGCAGAAGTTCCAGTTaGCCCTTGAATTTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VNTPPCLLKLIERMQGVIRRSSS*PLNLSP
Trigger: GGGAGACAAATTCAAGGGCCAACTGGAACTTCTGCG...GATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGTATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR TCA 90 bp TATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAAGTTCCAGTTGGCCCTTaGATTTGTCTCCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: YCSVAANRHSALQYITWQVPVGP*ICLPEV
Trigger: AACTTCTGGGAGACAAATTCAAGGGCCAACTGGAAC...TTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR GCA 90 bp CCTAGCCATCAACATGATGCTTGCAGTCTCAGGTGGGTAGTGAATACTCCTCCATCGGTAGCGATAAAGTaGATTCCAGAGAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: PSHQHDACSLRWVVNTPPSVAIK*IPEKLC
Trigger: GCACAGTTTCTCTGGAATGCACTTTATCGCTACCGA...TGGAGGAGTATTCACTACCCACCTGAGACTGCAAGCATCATGTTGATGGCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CCA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTGCTCCTCGAGGTTTCTaGAAGACTTCAATGTTAGTC +
Preference number: 4 (lower is better)
Translates to: REALGVMGCNSHSIQPKSAPRGF*KTSMLV
Trigger: GACTAACATTGAAGTCTTCCAGAAACCTCGAGGAGC...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CCA 90 bp CCCAGAAGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTTGTTACAAAACTACATCACTTGGCAATaGGGACAGTTCTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRSLWTISSSSLAVLLQNYITWQ*GQFWWR
Trigger: CCTCCACCAGAACTGTCCCCATTGCCAAGTGATGTA...GTTTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACTTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258100.8
3UTR CAA 72 bp AGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTaGTTACAAAACTGGGAAAAGAGTCTGATCCAACGG +
Preference number: 4 (lower is better)
Translates to: SLWTISSSSLAV*LQNWEKSLIQR
Trigger: CCGTTGGATCAGACTCTTTTCCCAGTTTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS CCA 90 bp GCGCGCGGCCCGCCACGCCCACGCAGAAGGAGAACACGTCGCACATaGAGGCCGCCATCTTGGGCGCGCCTCCGCCTTATGACCCTTAAC +
Preference number: 5 (lower is better)
Translates to: ARGPPRPRRRRTRRT*RPPSWARLRLMTLN
Trigger: GTTAAGGGTCATAAGGCGGAGGCGCGCCCAAGATGGCGGCCTCCATGTGCGACGTGTTCTCCTTCTGCGTGGGCGTGGCGGGCCGCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413491.5
CDS-3UTR CAA 90 bp GCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCGAGGTCTGGTGGGGGTaGGGGCCAGAGATCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ARQVSPGSMVQERACGVGEVWWG*GPEIQA
Trigger: AGCCTGGATCTCTGGCCCCAACCCCCACCAGACCTC...GCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp GAGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTATGGAGGCCGCCATCTaGGGCGCGCCTCCGCCTTAT +
Preference number: 5 (lower is better)
Translates to: EAEPGLVSRSASGHSPLPMEAAI*GAPPPY
Trigger: ATAAGGCGGAGGCGCGCCCAAGATGGCGGCCTCCAT...AGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CAA 90 bp GGCCTGGGCACAGGACCTGGTGGTATTGCTCAGTGGCTGCCAACCGACATTCTGATGGAGGCCGCCATCTaGGGCGCGCCTCCGCCTTAT +
Preference number: 5 (lower is better)
Translates to: GLGTGPGGIAQWLPTDILMEAAI*GAPPPY
Trigger: ATAAGGCGGAGGCGCGCCCAAGATGGCGGCCTCCAT...CAGAATGTCGGTTGGCAGCCACTGAGCAATACCACCAGGTCCTGTGCCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CAA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTCCAGTGGTCAAGCAGTaGCCTTACCAGCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: GDSLREGAQDAQILLPASPVVKQ*PYQPQL
Trigger: CAGCTGTGGCTGGTAAGGCAACTGCTTGACCACTGG...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGGCTGGTCCCGATTCCTaGGCCATTGGTCCCAACAAG +
Preference number: 5 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGAGPDS*AIGPNK
Trigger: CTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGC...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCAAGGAGGTCTCTGCATaGGGCACACAACTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCKEVSA*GTQLWL
Trigger: CAACCACAGTTGTGTGCCCAATGCAGAGACCTCCTT...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCTCTTCTGAGGTCACATaGGGTTCATCAGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCSSEVT*GSSASA
Trigger: GGCAGAGGCTGATGAACCCAATGTGACCTCAGAAGA...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGATGGAGGCCGCCATCTaGGGCGCGCCTCCGCCTTAT +
Preference number: 5 (lower is better)
Translates to: GWERSADRCEGVRTQWVRMEAAI*GAPPPY
Trigger: ATAAGGCGGAGGCGCGCCCAAGATGGCGGCCTCCAT...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp TGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTTCCCGGTCACTGATCCAACGGTCCTaGTCCTTCGCCTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: CAQCTALGEAEPGLVSRSLIQRS*SFACFT
Trigger: AGTGAAGCAGGCGAAGGACAAGGACCGTTGGATCAG...TGACCGGGAAACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CAA 90 bp GGCCAGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCCGCAGAAGTTCCAGTaGGCCCTTGAATTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GQTGFTWLHGPGKGLWGGPQKFQ*ALEFVS
Trigger: GGAGACAAATTCAAGGGCCAACTGGAACTTCTGCGG...CCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp AGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTGCCAGGAAAGGGAGGCATaGGGAGTGATGGGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: RQPQGRGSGCPDPPARLCQEREA*GVMGCN
Trigger: ATTACAACCCATCACTCCCAATGCCTCCCTTTCCTG...GCAGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp CAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCTGCACTGCAGTACATCACTaGGCAATGGGGACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: QVSPGSMVQERACGVGTCTAVHH*AMGTVL
Trigger: CAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGT...GCAGGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp GGAGACAGCCTCAGGGAAGGGGCTCAGGATGCCCAGATCCTCCTGCCCGCCTCTAGTTCCAGTTGGCCCTaGAATTTGTCTCCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GDSLREGAQDAQILLPASSSSWP*NLSPRS
Trigger: ACTTCTGGGAGACAAATTCAAGGGCCAACTGGAACT...AGAGGCGGGCAGGAGGATCTGGGCATCCTGAGCCCCTTCCCTGAGGCTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCCCGATTCCTTGGCCATaGGTCCCAACAAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RQVSPGSMVQERACGVGTPIPWP*VPTRAK
Trigger: CTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGG...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp GGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCGCTGCTGAGTGCTCATaGGGAAGCAGGTGTGAGAAA +
Preference number: 5 (lower is better)
Translates to: GPDSSPSNPRVEEPQGEAAAECS*GSRCEK
Trigger: TTTCTCACACCTGCTTCCCAATGAGCACTCAGCAGC...GGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS GCA 90 bp GTGGTCACAGGCTCGGTAGCGATAAAGTGCATTCCAGAGAAACTGTaGAGCCACCAGGGGCCGTTCTACGAAGATGGTCTCCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: VVTGSVAIKCIPEKL*SHQGPFYEDGLPLP
Trigger: CGGAAGGGGGAGACCATCTTCGTAGAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATCGCTACCGAGCCTGTGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389501.9
ENST00000443900.1
CDS-3UTR CAA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGAACAGCCCCTTTCCCTaGGCGCTGCTCACGAAACGG +
Preference number: 5 (lower is better)
Translates to: GWERSADRCEGVRTQWVRNSPFP*ALLTKR
Trigger: CCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGTT...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp GGAGGTCTTTGCGCACAGTGCACAGCTCTGGGTGAGGCAGAACCTGGCCTGGTTCCGATTCCTTGGCCATaGGTCCCAACAAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GGLCAQCTALGEAEPGLVPIPWP*VPTRAK
Trigger: CTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGG...AACCAGGCCAGGTTCTGCCTCACCCAGAGCTGTGCACTGTGCGCAAAGACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CAA 90 bp GGCCCTGATTCCAGCCCCTCAAACCCTAGAGTGGAGGAACCTCAAGGGGAGGCCACCACTCACATTTTATaGAGAACAGTGGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GPDSSPSNPRVEEPQGEATTHIL*RTVGRG
Trigger: CCCCCTGCCCACTGTTCTCAATAAAATGTGAGTGGT...GGCCTCCCCTTGAGGTTCCTCCACTCTAGGGTTTGAGGGGCTGGAATCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS GCA 90 bp TCTCTAGTGCCCTCGGTAGCGATAAAGTGCATTCCAGAGAAACTGTaGAGCCACCAGGGGCCGTTCTACGAAGATGGTCTCCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: SLVPSVAIKCIPEKL*SHQGPFYEDGLPLP
Trigger: CGGAAGGGGGAGACCATCTTCGTAGAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATCGCTACCGAGGGCACTAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS GCA 90 bp CAGGCACCATTCTCGGTAGCGATAAAGTGCATTCCAGAGAAACTGTaGAGCCACCAGGGGCCGTTCTACGAAGATGGTCTCCCCCTTCCG +
Preference number: 5 (lower is better)
Translates to: QAPFSVAIKCIPEKL*SHQGPFYEDGLPLP
Trigger: CGGAAGGGGGAGACCATCTTCGTAGAACGGCCCCTGGTGGCTGCACAGTTTCTCTGGAATGCACTTTATCGCTACCGAGAATGGTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000413491.5
ENST00000474652.1
ENST00000629411.2
CDS GCA 90 bp TCTCTAGGAGCCAAGTTTGCGTTGCCCTTCAGTGAAGGGGCTGGCTaGCCTCATCCAGTTCCCAGTGCCTTCAGTAGGCAGGCCACTATA +
Preference number: 5 (lower is better)
Translates to: SLGAKFALPFSEGAG*PHPVPSAFSRQATI
Trigger: TATAGTGGCCTGCCTACTGAAGGCACTGGGAACTGGATGAGGGCAGCCAGCCCCTTCACTGAAGGGCAACGCAAACTTGGCTCCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS CCA 90 bp ACTATAAGGCTCCAACAGCCTGTGCCTGAGACAGAGGAGACTGGTTaGCCTCAGGCCGTGGTGAAAGCCAGTCAATGGCCAAGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: TIRLQQPVPETEETG*PQAVVKASQWPRSA
Trigger: TGCAGACCTTGGCCATTGACTGGCTTTCACCACGGCCTGAGGCCAACCAGTCTCCTCTGTCTCAGGCACAGGCTGTTGGAGCCTTATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS-3UTR CAA 90 bp TGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGAACAGCCCCTTTCCCTaGGCGCTGCTCACGAAACGG +
Preference number: 5 (lower is better)
Translates to: CSVAANRHSALQYITWQWNSPFP*ALLTKR
Trigger: CCGTTTCGTGAGCAGCGCCAAGGGAAAGGGGCTGTT...CCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CAA 90 bp AGGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTTACTGCAGTACATCACTaGGCAATGGGGACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: RQNLAWFPGQPLGILLCLTAVHH*AMGTVL
Trigger: CAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGT...AAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CAA 90 bp GGCAGAACCTGGCCTGGTTTCCCGGTCAGCCTCTGGGCATTCTCCTCTGCCTTCAGTTCCAGTTGGCCCTaGAATTTGTCTCCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GRTWPGFPVSLWAFSSAFSSSWP*NLSPRS
Trigger: ACTTCTGGGAGACAAATTCAAGGGCCAACTGGAACT...GAAGGCAGAGGAGAATGCCCAGAGGCTGACCGGGAAACCAGGCCAGGTTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS GCA 90 bp TGGTTGGCCTCAGGCCGTGGTGAAAGCCAGTCAATGGCCAAGGTCTaGAGCTGGGATCAGAGGTCTTGGTATGATGCTACTTGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: WLASGRGESQSMAKV*SWDQRSWYDATCPQ
Trigger: TTGAGGGCAAGTAGCATCATACCAAGACCTCTGATCCCAGCTGCAGACCTTGGCCATTGACTGGCTTTCACCACGGCCTGAGGCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS-3UTR CAA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGTTCTGGTGGAGGTCTTaGCGCACAGTGCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: GWERSADRCEGVRTQWVRFWWRS*RTVHSS
Trigger: AGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAA...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp AGACAGGTTTCACCTGGCTCCATGGTCCAGGAAAGGGCCTGTGGGGTGGGCACCAGTTGGCCCTTGAATTaGTCTCCCAGAAGTTTATGG +
Preference number: 5 (lower is better)
Translates to: RQVSPGSMVQERACGVGTSWPLN*SPRSLW
Trigger: CCATAAACTTCTGGGAGACAAATTCAAGGGCCAACT...GGTGCCCACCCCACAGGCCCTTTCCTGGACCATGGAGCCAGGTGAAACCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTTTCTCCCTGAGGATCTaGTGGCGGCTGTGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: REALGVMGCNSHSIQPKSFSLRI*WRLWRL
Trigger: CAGCCGCCACAGCCGCCACAAGATCCTCAGGGAGAA...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS TCA 90 bp TTCTGGCTCTCCTTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCTaGGGTCACATTGGGTTCATCAGCCTCTGCCAGGCATTTGGGACA +
Preference number: 5 (lower is better)
Translates to: FWLSFLLLLLFLFLF*GHIGFISLCQAFGT
Trigger: TGTCCCAAATGCCTGGCAGAGGCTGATGAACCCAATGTGACCTCAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGGAGAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS CCA 90 bp GCCTCAGGCCGTGGTGAAAGCCAGTCAATGGCCAAGGTCTGCAGCTaGGATCAGAGGTCTTGGTATGATGCTACTTGCCCTCAAGAAGAT +
Preference number: 5 (lower is better)
Translates to: ASGRGESQSMAKVCS*DQRSWYDATCPQED
Trigger: ATCTTCTTGAGGGCAAGTAGCATCATACCAAGACCTCTGATCCCAGCTGCAGACCTTGGCCATTGACTGGCTTTCACCACGGCCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS-3UTR CAA 90 bp ACTCCTCCATGCCTCCTGAAGCTTATTGAGAGGATGCAAGGGGTCATCCTGGGATTCTGGTGGAGGTCTTaGCGCACAGTGCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: TPPCLLKLIERMQGVILGFWWRS*RTVHSS
Trigger: AGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAA...TCCCAGGATGACCCCTTGCATCCTCTCAATAAGCTTCAGGAGGCATGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS TCA 90 bp GAAACTCTCCAGTTGCTGCCTCGATGTCCTTGTATAGCTGGTCAATaGAGGCGTCAAGCTGCTCACGGTCCTGAGGCTTCAACTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ETLQLLPRCPCIAGQ*RRQAAHGPEASTPE
Trigger: CTCTGGAGTTGAAGCCTCAGGACCGTGAGCAGCTTGACGCCTTCATTGACCAGCTATACAAGGACATCGAGGCAGCAACTGGAGAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS TCA 90 bp CCAGTCAATGGCCAAGGTCTGCAGCTGGGATCAGAGGTCTTGGTATaGTGCTACTTGCCCTCAAGAAGATTCAACCAGGCACTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: PVNGQGLQLGSEVLV*CYLPSRRFNQALCL
Trigger: CAGGCACAGTGCCTGGTTGAATCTTCTTGAGGGCAAGTAGCATCATACCAAGACCTCTGATCCCAGCTGCAGACCTTGGCCATTGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS-3UTR CAA 90 bp CAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGGGGACACTGCAGTACATCACTaGGCAATGGGGACAGTTCTG +
Preference number: 5 (lower is better)
Translates to: QWLPTDILHCSTSLGNGDTAVHH*AMGTVL
Trigger: CAGAACTGTCCCCATTGCCAAGTGATGTACTGCAGT...GTCCCCATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CAA 90 bp GGCTGGGAGAGGAGTGCTGACCGTTGTGAAGGAGTAAGAACCCAATGGGTAAGGGCTGCCTCGATGTCCTaGTATAGCTGGTCAATGAAG +
Preference number: 5 (lower is better)
Translates to: GWERSADRCEGVRTQWVRAASMS*YSWSMK
Trigger: CTTCATTGACCAGCTATACAAGGACATCGAGGCAGC...CCTTACCCATTGGGTTCTTACTCCTTCACAACGGTCAGCACTCCTCTCCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp TATTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATTCTGGTGGAGGTCTTaGCGCACAGTGCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: YCSVAANRHSALQYITWQFWWRS*RTVHSS
Trigger: AGAGCTGTGCACTGTGCGCAAAGACCTCCACCAGAA...TTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258100.8
ENST00000413491.5
CDS-3UTR CAA 90 bp AGGGAGGCATTGGGAGTGATGGGTTGTAATTCCCATAGCATCCAACCCAAGAGTCTGATCCAACGGTCCTaGTCCTTCGCCTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: REALGVMGCNSHSIQPKSLIQRS*SFACFT
Trigger: AGTGAAGCAGGCGAAGGACAAGGACCGTTGGATCAG...ACTCTTGGGTTGGATGCTATGGGAATTACAACCCATCACTCCCAATGCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS CCA 90 bp GAAAGCCAGTCAATGGCCAAGGTCTGCAGCTGGGATCAGAGGTCTTaGTATGATGCTACTTGCCCTCAAGAAGATTCAACCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: ESQSMAKVCSWDQRS*YDATCPQEDSTRHC
Trigger: ACAGTGCCTGGTTGAATCTTCTTGAGGGCAAGTAGCATCATACCAAGACCTCTGATCCCAGCTGCAGACCTTGGCCATTGACTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS-3UTR CAA 90 bp TGGCCATTGGTCCCAACAAGAGCAAAGAGAGACCGGAATCCATCTGGAGTGAACAGTTGGCCCTTGAATTaGTCTCCCAGAAGTTTATGG +
Preference number: 5 (lower is better)
Translates to: WPLVPTRAKRDRNPSGVNSWPLN*SPRSLW
Trigger: CCATAAACTTCTGGGAGACAAATTCAAGGGCCAACT...GTTCACTCCAGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS-3UTR CAA 90 bp TTGCTCAGTGGCTGCCAACCGACATTCTGCACTGCAGTACATCACTTGGCAATGAGACACAACAATATCTaGAGAGCAGAGGCCACATCT +
Preference number: 5 (lower is better)
Translates to: LLSGCQPTFCTAVHHLAMRHNNI*RAEATS
Trigger: AGATGTGGCCTCTGCTCTCAAGATATTGTTGTGTCT...CATTGCCAAGTGATGTACTGCAGTGCAGAATGTCGGTTGGCAGCCACTGAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413491.5
CDS GCA 90 bp TATGATGCTACTTGCCCTCAAGAAGATTCAACCAGGCACTGTGCCTaGACTAACAGACAAGACCCTAAACCCACAAAGAGCTATCTCCTG +
Preference number: 5 (lower is better)
Translates to: YDATCPQEDSTRHCA*TNRQDPKPTKSYLL
Trigger: CAGGAGATAGCTCTTTGTGGGTTTAGGGTCTTGTCTGTTAGTGCAGGCACAGTGCCTGGTTGAATCTTCTTGAGGGCAAGTAGCATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS CCA 90 bp GTAACTTCAATAGCTCTGGAACATTCTAACCTGGTCCCGATTCCTTaGCCATTGGTCCCAACAAGAGCAAAGAGAGACCGGAATCCATCT +
Preference number: 5 (lower is better)
Translates to: VTSIALEHSNLVPIP*PLVPTRAKRDRNPS
Trigger: AGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGGTTAGAATGTTCCAGAGCTATTGAAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477038.1
CDS CCA 90 bp CTTAATATCCTCCAGAGCAGTGACATGCAAAAGGAAGTTGTTTTCTaGAAAGGAGGTCTCTGCATTGGGCACACAACTGTGGTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LNILQSSDMQKEVVF*KGGLCIGHTTVVAA
Trigger: TGCTGCAACCACAGTTGTGTGCCCAATGCAGAGACCTCCTTTCCAGAAAACAACTTCCTTTTGCATGTCACTGCTCTGGAGGATATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS-3UTR CAA 90 bp CCCAGAAGTTTATGGACAATTTCCTCCTCTTCATTGGCTGTTTTGTTACAAAACCCGCAGAAGTTCCAGTaGGCCCTTGAATTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: PRSLWTISSSSLAVLLQNPQKFQ*ALEFVS
Trigger: GGAGACAAATTCAAGGGCCAACTGGAACTTCTGCGG...GTTTTGTAACAAAACAGCCAATGAAGAGGAGGAAATTGTCCATAAACTTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258100.8
CDS GCA 72 bp GCCAAGTTTGCGTTGCCCTTCAGTGAAGGGGCTGGCTaGCCTCATCCAGTTCCCAGTGCCTTCAGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: AKFALPFSEGAG*PHPVPSAFSRQ
Trigger: CTGCCTACTGAAGGCACTGGGAACTGGATGAGGGCAGCCAGCCCCTTCACTGAAGGGCAACGCAAACTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS CCA 72 bp CTCCAACAGCCTGTGCCTGAGACAGAGGAGACTGGTTaGCCTCAGGCCGTGGTGAAAGCCAGTCAATGGCCA +
Preference number: 6 (lower is better)
Translates to: LQQPVPETEETG*PQAVVKASQWP
Trigger: TGGCCATTGACTGGCTTTCACCACGGCCTGAGGCCAACCAGTCTCCTCTGTCTCAGGCACAGGCTGTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS TCA 72 bp GGCGGCTGCGCTCCCGCTGACAGCAGTCCAAGTAGCTaGTACAAATTTCCTGTAGGGCAGAGAAGTGCAGTC +
Preference number: 6 (lower is better)
Translates to: GGCAPADSSPSS*YKFPVGQRSAV
Trigger: GACTGCACTTCTCTGCCCTACAGGAAATTTGTATCAGCTACTTGGACTGCTGTCAGCGGGAGCGCAGCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS TCA 72 bp TCCTTCCTCCTCCTCCTCCTCTTCCTCTTCCTCTTCTaGGGTCACATTGGGTTCATCAGCCTCTGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: SFLLLLLFLFLF*GHIGFISLCQA
Trigger: TGCCTGGCAGAGGCTGATGAACCCAATGTGACCTCAGAAGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS GCA 72 bp AAGGACCTCCCCAACAGCTACCCTATCTCCAACCACTaGCCCATCTCTAGGAGCCAAGTTTGCGTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: KDLPNSYPISNH*PISRSQVCVAL
Trigger: AAGGGCAACGCAAACTTGGCTCCTAGAGATGGGGCAGTGGTTGGAGATAGGGTAGCTGTTGGGGAGGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS TCA 72 bp CAGTTGCTGCCTCGATGTCCTTGTATAGCTGGTCAATaGAGGCGTCAAGCTGCTCACGGTCCTGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: QLLPRCPCIAGQ*RRQAAHGPEAS
Trigger: TGAAGCCTCAGGACCGTGAGCAGCTTGACGCCTTCATTGACCAGCTATACAAGGACATCGAGGCAGCAACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS GCA 72 bp TCAGGCCGTGGTGAAAGCCAGTCAATGGCCAAGGTCTaGAGCTGGGATCAGAGGTCTTGGTATGATGCTACT +
Preference number: 6 (lower is better)
Translates to: SGRGESQSMAKV*SWDQRSWYDAT
Trigger: AGTAGCATCATACCAAGACCTCTGATCCCAGCTGCAGACCTTGGCCATTGACTGGCTTTCACCACGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS CCA 72 bp ACTGGCTTAGGGAGCTGGTCCCGATTCCTTGGCCATTaGTCCCAACAAGAGCAAAGAGAGACCGGAATCCAT +
Preference number: 6 (lower is better)
Translates to: TGLGSWSRFLGH*SQQEQRETGIH
Trigger: ATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGCTCCCTAAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389501.9
CDS GCA 72 bp TGCAGCTGGGATCAGAGGTCTTGGTATGATGCTACTTaGCCTCAAGAAGATTCAACCAGGCACTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: CSWDQRSWYDAT*PQEDSTRHCAC
Trigger: GCAGGCACAGTGCCTGGTTGAATCTTCTTGAGGGCAAGTAGCATCATACCAAGACCTCTGATCCCAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS CAA 72 bp CACAGGCTGACGGTGAGAGCCAGACACAACAATATCTaGAGAGCAGAGGCCACATCTATCCCTTTCACAGCC +
Preference number: 6 (lower is better)
Translates to: HRLTVRARHNNI*RAEATSIPFTA
Trigger: GGCTGTGAAAGGGATAGATGTGGCCTCTGCTCTCAAGATATTGTTGTGTCTGGCTCTCACCGTCAGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413491.5
ENST00000474652.1
ENST00000491204.1
CDS GCA 72 bp CTATCCCTTTCACAGCCCTACAGAGCAGCTGCTATGTaGCAGGCACCATTCTCGGTAGCGATAAAGTGCATT +
Preference number: 6 (lower is better)
Translates to: LSLSQPYRAAAM*QAPFSVAIKCI
Trigger: AATGCACTTTATCGCTACCGAGAATGGTGCCTGGCACATAGCAGCTGCTCTGTAGGGCTGTGAAAGGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413491.5
ENST00000474652.1
CDS CCA 72 bp ATAGCTCTGGAACATTCTAACCTGGTCCCGATTCCTTaGCCATTGGTCCCAACAAGAGCAAAGAGAGACCGG +
Preference number: 6 (lower is better)
Translates to: IALEHSNLVPIP*PLVPTRAKRDR
Trigger: CCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGGTTAGAATGTTCCAGAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477038.1
CDS CAA 72 bp CTGGAACATTCTAACCTGGTCCCGATTCCTTGGCCATaGGTCCCAACAAGAGCAAAGAGAGACCGGAATCCA +
Preference number: 6 (lower is better)
Translates to: LEHSNLVPIPWP*VPTRAKRDRNP
Trigger: TGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGGTTAGAATGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477038.1
CDS CAA 90 bp TCAATAGCTCTGGAACATTCTAACCTGGTCCCGATTCCTTGGCCATaGGTCCCAACAAGAGCAAAGAGAGACCGGAATCCATCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: SIALEHSNLVPIPWP*VPTRAKRDRNPSGV
Trigger: CACTCCAGATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGGTTAGAATGTTCCAGAGCTATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477038.1
CDS GCA 72 bp ACTTGCCCTCAAGAAGATTCAACCAGGCACTGTGCCTaGACTAACAGACAAGACCCTAAACCCACAAAGAGC +
Preference number: 6 (lower is better)
Translates to: TCPQEDSTRHCA*TNRQDPKPTKS
Trigger: GCTCTTTGTGGGTTTAGGGTCTTGTCTGTTAGTGCAGGCACAGTGCCTGGTTGAATCTTCTTGAGGGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486518.1
CDS CCA 72 bp TGGAACATTCTAACCTGGTCCCGATTCCTTGGCCATTaGTCCCAACAAGAGCAAAGAGAGACCGGAATCCAT +
Preference number: 6 (lower is better)
Translates to: WNILTWSRFLGH*SQQEQRETGIH
Trigger: ATGGATTCCGGTCTCTCTTTGCTCTTGTTGGGACCAATGGCCAAGGAATCGGGACCAGGTTAGAATGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477038.1
CDS CCA 72 bp AGAGAAGTGCAGTCTGATGGTCTGTGCTCTTTTAAATaGCATAAGGACCTCCCCAACAGCTACCCTATCTCC +
Preference number: 6 (lower is better)
Translates to: REVQSDGLCSFK*HKDLPNSYPIS
Trigger: GGAGATAGGGTAGCTGTTGGGGAGGTCCTTATGCCATTTAAAAGAGCACAGACCATCAGACTGCACTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486518.1