Pregenerated sensors for SMYD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000185420Ensembl transcript IDs: ENST00000366516.5, ENST00000366517.5, ENST00000391836.3, ENST00000403792.7, ENST00000453676.5, ENST00000455277.2, ENST00000462422.5, ENST00000464398.1, ENST00000470510.5, ENST00000470863.1, ENST00000483072.5, ENST00000488153.5, ENST00000490107.6, ENST00000492487.5, ENST00000493441.5, ENST00000630181.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTGCAAACACACAATGTaGGAAAGCGAGGACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VRVYSVEHENSLGHGTRYCKHTM*ESEDSR Trigger: TCTGCTGTCCTCGCTTTCTCACATTGTGTGTTTGCA...GTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR GCA 90 bp | CAGCAGATCCATAGCAGTGAGGGGGTGTTTCTGTCATCCCTATCCCAGGGTAAACGCCACGACTCCCCTTaGACACCGTGTACGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QQIHSSEGVFLSSLSQGKRHDSP*TPCTPR Trigger: CCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCG...TTTACCCTGGGATAGGGATGACAGAAACACCCCCTCACTGCTATGGATCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR TCA 90 bp | AGCGAGGACAGCAGATCCATAGCAGTGAGGGGGTGTTTCTGTCATCCCTATCCCAAGGCAGGTGGCAGCTaGGAGGCATCCTGTATTTCT | + |
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Preference number: 4 (lower is better) Translates to: SEDSRSIAVRGCFCHPYPKAGGS*EASCIS Trigger: AGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTT...GGGATAGGGATGACAGAAACACCCCCTCACTGCTATGGATCTGCTGTCCTCGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CCA 90 bp | CAGCAGATCCATAGCAGTGAGGGGGTGTTTCTGTCATCCCTATCCCAGGGTAAAGCCCGTTTCCCCTCTTaGCGGTTGCGAACTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QQIHSSEGVFLSSLSQGKARFPS*RLRTFP Trigger: TGGAAAAGTTCGCAACCGCCAAGAGGGGAAACGGGC...TTTACCCTGGGATAGGGATGACAGAAACACCCCCTCACTGCTATGGATCTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR TCA 90 bp | AACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTTTTTGGCGACGCGGCACTaGGAGCATCGCATCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: NMKTALGTAHDTTTGYNFLATRH*EHRISF Trigger: AAAGCTGATGCGATGCTCTCAGTGCCGCGTCGCCAA...AAAATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CCA 90 bp | AACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTTTAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: NMKTALGTAHDTTTGYNFKVKGR*QLRGIL Trigger: CAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTT...AAAATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR TCA 90 bp | TTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTGCAAACACACAATGTaGGAAAGCGAGGACAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LNMKTALGTAHDTTTGYNCKHTM*ESEDSR Trigger: TCTGCTGTCCTCGCTTTCTCACATTGTGTGTTTGCA...ATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR GCA 90 bp | GTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACCATGCCTATGGGTTTTaGAAAGGCTTCAAAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: VRVYSVEHENSLGHGTRYHAYGF*KGFKKV Trigger: GACCTTTTTGAAGCCTTTGCAAAACCCATAGGCATG...GTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR TCA 90 bp | TTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTCATTACGAGTTGCCTaGGGCCCTCTTTCTTATCTT | + |
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Preference number: 4 (lower is better) Translates to: LNMKTALGTAHDTTTGYNSLRVA*GPLSYL Trigger: AAGATAAGAAAGAGGGCCTCAGGCAACTCGTAATGA...ATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR GCA 90 bp | GTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATGAAGCAATCATTTCATaGCTATGGGTTTTGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VLNMKTALGTAHDTTTGYEAIIS*LWVLQR Trigger: CCTTTGCAAAACCCATAGGCATGAAATGATTGCTTC...ATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CCA 90 bp | AACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTTTAAGTCGAACGGAGTCTaGAGGATATCTGGGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NMKTALGTAHDTTTGYNFKSNGV*RISGFA Trigger: TGCAAACCCAGATATCCTCCAGACTCCGTTCGACTT...AAAATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| 3UTR CAA 72 bp | GTGTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTaGGGCACGGCACACGATACTACTACAGGTTATAAT | + |
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Preference number: 4 (lower is better) Translates to: VFVFIVLNMKTA*GTAHDTTTGYN Trigger: ATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR TCA 90 bp | AACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTTTTCTCTCATGAAATGTTaGAATGTCATTACGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: NMKTALGTAHDTTTGYNFSLMKC*NVITSC Trigger: GCAACTCGTAATGACATTTCAACATTTCATGAGAGA...AAAATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS GCA 90 bp | CCTTCCCGAGAAGGCAGCGGTCGCAGACGACGCCACGACTCCCCTTaGACACCGTGTACGCCAAGGGATCCGAGCGGAAGAGTAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PSREGSGRRRRHDSP*TPCTPRDPSGRVAL Trigger: GAGAGCTACTCTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCGACCGCTGCCTTCTCGGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403792.7 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 |
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| CDS TCA 90 bp | TGGTCCGAGTACCATAGAACAAGGCTTCCTCCAACAGGCCGAGGTTaGTGCAGGCATCCATGGCGCAGTCGAGCACCTTCAGCTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: WSEYHRTRLPPTGRG*CRHPWRSRAPSAGR Trigger: TCTACCAGCTGAAGGTGCTCGACTGCGCCATGGATGCCTGCATCAACCTCGGCCTGTTGGAGGAAGCCTTGTTCTATGGTACTCGGACCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000470510.5 ENST00000483072.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
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| CDS CCA 90 bp | TTGTCCTGGGTTTGGCAACGGAAACAGTCACATTCAAAGCAGTACTaGTCCCTCAGCTGCTTCCGGCGCTCCTCACTGGTCATCAGCATA | + |
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Preference number: 5 (lower is better) Translates to: LSWVWQRKQSHSKQY*SLSCFRRSSLVISI Trigger: TATGCTGATGACCAGTGAGGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTTCCGTTGCCAAACCCAGGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
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| CDS CCA 90 bp | CCACCAGGGCAAAAGGTTCACAACAGCAGTTCCTCAGCCAAGTCGTaGGAAAGGCTGTATCACATTCCGGTCTTCTGCTTCCCAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: PPGQKVHNSSSSAKS*ERLYHIPVFCFPVS Trigger: TGAGACTGGGAAGCAGAAGACCGGAATGTGATACAGCCTTTCCCACGACTTGGCTGAGGAACTGCTGTTGTGAACCTTTTGCCCTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391836.3 |
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| CDS-3UTR CAA 90 bp | CGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTACACGCCACGACTCCCCTaGCACACCGTGTACGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RVYSVEHENSLGHGTRYYTPRLP*HTVYAK Trigger: CTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGT...GTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS TCA 90 bp | AGCAACTTGTCTCTTACTCCTACAGAAAGCGAAGTATCCCGTGACTaGGCCTGTCGTCTGATGCGTGTTGGTGAAGACCACAGGGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SNLSLTPTESEVSRD*ACRLMRVGEDHREH Trigger: GTGCTCCCTGTGGTCTTCACCAACACGCATCAGACGACAGGCTCAGTCACGGGATACTTCGCTTTCTGTAGGAGTAAGAGACAAGTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS TCA 90 bp | TTACTCCTACAGAAAGCGAAGTATCCCGTGACTGAGCCTGTCGTCTaGTGCGTGTTGGTGAAGACCACAGGGAGCACTGGAGGTCATTTA | + |
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Preference number: 5 (lower is better) Translates to: LLLQKAKYPVTEPVV*CVLVKTTGSTGGHL Trigger: TAAATGACCTCCAGTGCTCCCTGTGGTCTTCACCAACACGCATCAGACGACAGGCTCAGTCACGGGATACTTCGCTTTCTGTAGGAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS TCA 90 bp | CTCTCCCCACATCACAGGCACAGTTACCTCGCAGGAGAATGTCTCTaGAGCCCCTTAGAGTCATTATGCAAGAGGTCTCACGGAACAACT | + |
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Preference number: 5 (lower is better) Translates to: LSPHHRHSYLAGECL*SPLESLCKRSHGTT Trigger: AGTTGTTCCGTGAGACCTCTTGCATAATGACTCTAAGGGGCTTCAGAGACATTCTCCTGCGAGGTAACTGTGCCTGTGATGTGGGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000391836.3 |
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| CDS GCA 90 bp | GTAGATGTTGATATCGGGAAGCCGTTCAGAATTGCTGCTTATGATTaGCTGGCACATGGCCAGAACCTGCTCCCACTTCCAGTGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VDVDIGKPFRIAAYD*LAHGQNLLPLPVCL Trigger: AAGGCACACTGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCAATCATAAGCAGCAATTCTGAACGGCTTCCCGATATCAACATCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
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| CDS-3UTR CAA 90 bp | GTGTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATAGCCCGTTTCCCCTCTaGGCGGTTGCGAACTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: VFVFIVLNMKTALGTAHDSPFPL*AVANFS Trigger: GGAAAAGTTCGCAACCGCCAAGAGGGGAAACGGGCT...ATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS TCA 90 bp | CTGATGTGGCTGATGGTGCTCATAAGCAAACGGCACCTGCCCACTTaGAATGTAACCATCTTCTTCTGTAGCTTCTGTAGCGAGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LMWLMVLISKRHLPT*NVTIFFCSFCSEPL Trigger: CAGAGGCTCGCTACAGAAGCTACAGAAGAAGATGGTTACATTTCAAGTGGGCAGGTGCCGTTTGCTTATGAGCACCATCAGCCACATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488153.5 ENST00000493441.5 |
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| CDS CCA 90 bp | GGAGGTCATTTAGTCAAGCCATGGTATTTACCAGGAGTCCATCACTaGGTACATGACACAGTCCTGTCTTATGCAGGGACGGAGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GGHLVKPWYLPGVHH*VHDTVLSYAGTEQK Trigger: CTTCTGCTCCGTCCCTGCATAAGACAGGACTGTGTCATGTACCCAGTGATGGACTCCTGGTAAATACCATGGCTTGACTAAATGACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS CCA 90 bp | TTGGTGAAGACCACAGGGAGCACTGGAGGTCATTTAGTCAAGCCATaGTATTTACCAGGAGTCCATCACTGGGTACATGACACAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LVKTTGSTGGHLVKP*YLPGVHHWVHDTVL Trigger: CAGGACTGTGTCATGTACCCAGTGATGGACTCCTGGTAAATACCATGGCTTGACTAAATGACCTCCAGTGCTCCCTGTGGTCTTCACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS-3UTR CAA 90 bp | AGCGAGGACAGCAGATCCATAGCAGTGAGGGGGTGTTTCTGTCATCCCTATCCCTCATGCCTATGGGTTTaGCAAAGGCTTCAAAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: SEDSRSIAVRGCFCHPYPSCLWV*QRLQKG Trigger: ACCTTTTTGAAGCCTTTGCAAAACCCATAGGCATGA...GGGATAGGGATGACAGAAACACCCCCTCACTGCTATGGATCTGCTGTCCTCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS GCA 90 bp | ACGGAGAACAGTAGGGGTGTTGCAGCAGAGAAAGAGTTTAATTACTaGAAGGCAGCTGAGCAGAAGGAGGGGAGGTATCTCTCAAATCCA | + |
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Preference number: 5 (lower is better) Translates to: TENSRGVAAEKEFNY*KAAEQKEGRYLSNP Trigger: TGGATTTGAGAGATACCTCCCCTCCTTCTGCTCAGCTGCCTTGCAGTAATTAAACTCTTTCTCTGCTGCAACACCCCTACTGTTCTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630181.2 |
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| CDS-3UTR CAA 90 bp | GTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAACATGAAAACAGCCTaGGGCACGGCACACGATACT | + |
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Preference number: 5 (lower is better) Translates to: VLNMKTALGTAHDTTTGYNMKTA*GTAHDT Trigger: AGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTT...ATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS TCA 90 bp | TTTAGTCAAGCCATGGTATTTACCAGGAGTCCATCACTGGGTACATaGCACAGTCCTGTCTTATGCAGGGACGGAGCAGAAGCAGTAAAA | + |
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Preference number: 5 (lower is better) Translates to: FSQAMVFTRSPSLGT*HSPVLCRDGAEAVK Trigger: TTTTACTGCTTCTGCTCCGTCCCTGCATAAGACAGGACTGTGTCATGTACCCAGTGATGGACTCCTGGTAAATACCATGGCTTGACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS TCA 90 bp | GATATAGGCCAACACCAACTTCCTGCATCTCCGCATTACAGATGGTaGAAGAGTTGCAGATCACCTGTAAACACAAGGGGAACCATCAGT | + |
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Preference number: 5 (lower is better) Translates to: DIGQHQLPASPHYRW*KSCRSPVNTRGTIS Trigger: ACTGATGGTTCCCCTTGTGTTTACAGGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTGGCCTATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS CCA 90 bp | GAACCATGGAAAGAGCACTGGACCAGAATCAGGAAATCTAGATTCTaGCTAAAATCACTGCTTCAGACAGGTGCGAGGAAAAGAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: EPWKEHWTRIRKSRF*LKSLLQTGARKRAV Trigger: CACTGCTCTTTTCCTCGCACCTGTCTGAAGCAGTGATTTTAGCCAGAATCTAGATTTCCTGATTCTGGTCCAGTGCTCTTTCCATGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS-3UTR CAA 90 bp | TTGAACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTTCCCCTCTTGGCGGTaGCGAACTTTTCCACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LNMKTALGTAHDTTTGYNFPSWR*RTFPPS Trigger: TGAAGGTGGAAAAGTTCGCAACCGCCAAGAGGGGAA...ATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CAA 90 bp | GTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACCAGCTTTTAAGGCATTaGCATTCCCGCTTGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: VRVYSVEHENSLGHGTRYQLLRH*HSRLWS Trigger: AGACCACAAGCGGGAATGCAAATGCCTTAAAAGCTG...GTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS CCA 90 bp | ATCCATAAGTTTGAAGACAACTCTGCCAAGAAGTCGAACGGAGTCTaGAGGATATCTGGGTTTGCAGCTTTTAAGGCATTTGCATTCCCG | + |
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Preference number: 5 (lower is better) Translates to: IHKFEDNSAKKSNGV*RISGFAAFKAFAFP Trigger: CGGGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCCAGACTCCGTTCGACTTCTTGGCAGAGTTGTCTTCAAACTTATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000403792.7 ENST00000453676.5 ENST00000455277.2 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 ENST00000630181.2 |
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| CDS CCA 90 bp | CATGCCTATGGGTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCATGAAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: HAYGFCKGFKKVKGR*QLRGILYFFSHEML Trigger: CAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAACCCATAGGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CAA 90 bp | GTGTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATGCTCCATCCATAAGTTaGAAGACAACTCTGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: VFVFIVLNMKTALGTAHDAPSIS*KTTLPR Trigger: TCTTGGCAGAGTTGTCTTCAAACTTATGGATGGAGC...ATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CAA 90 bp | GTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATACAAATGTCATTACGAGTaGCCTGAGGCCCTCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VRVYSVEHENSLGHGTRYKCHYE*PEALFL Trigger: AAGAAAGAGGGCCTCAGGCAACTCGTAATGACATTT...GTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS TCA 90 bp | GTTGCTTTGTGTCTTGCGCATCAATCTCAGAGCAAGCAGAATAGATaGTCTGAAATATTAATCCTAAACGGGTCTTGCCAGTGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VALCLAHQSQSKQNR*SEILILNGSCQWAA Trigger: AGCTGCCCACTGGCAAGACCCGTTTAGGATTAATATTTCAGATCATCTATTCTGCTTGCTCTGAGATTGATGCGCAAGACACAAAGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464398.1 |
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| CDS TCA 90 bp | CCCAGTTCCAACATTTGTTGGCTCTGTAACGCTCAGGTGCAGTTATaGCATCTGAACACAGTGAGAACAATCCATGTTCAGGAAGTAATT | + |
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Preference number: 5 (lower is better) Translates to: PSSNICWLCNAQVQL*HLNTVRTIHVQEVI Trigger: AATTACTTCCTGAACATGGATTGTTCTCACTGTGTTCAGATGTCATAACTGCACCTGAGCGTTACAGAGCCAACAAATGTTGGAACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462422.5 |
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| CDS CCA 90 bp | AAGACTCCATCTTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCATGAAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: KTPSFCKGFKKVKGR*QLRGILYFFSHEML Trigger: CAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAAAGATGGAGTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000462422.5 |
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| CDS CCA 90 bp | CTTAACACTTACTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCATGAAATGTTG | + |
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Preference number: 5 (lower is better) Translates to: LNTYFCKGFKKVKGR*QLRGILYFFSHEML Trigger: CAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAAGTAAGTGTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470863.1 |
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| CDS-3UTR CAA 90 bp | AACATGAAAACAGCCTTGGGCACGGCACACGATACTACTACAGGTTATAATTTTGGAGGATATCTGGGTTaGCAGCTTTTAAGGCATTTG | + |
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Preference number: 5 (lower is better) Translates to: NMKTALGTAHDTTTGYNFGGYLG*QLLRHL Trigger: CAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCC...AAAATTATAACCTGTAGTAGTATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS-3UTR CAA 90 bp | GTGTTCGTGTTTATAGTGTTGAACATGAAAACAGCCTTGGGCACGGCACACGATTTCGTGTTTATAGTGTaGAACATGAAAACAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VFVFIVLNMKTALGTAHDFVFIV*NMKTAL Trigger: CAAGGCTGTTTTCATGTTCAACACTATAAACACGAA...ATCGTGTGCCGTGCCCAAGGCTGTTTTCATGTTCAACACTATAAACACGAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403792.7 |
||
| CDS GCA 72 bp | GGTCACGGCGCGCAGCCCGTTTCCCCTCTTGGCGGTTaGGAACTTTTCCACCTTCAGCGGCTCCATCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GHGAQPVSPLGG*ELFHLQRLHPP Trigger: GGGAGGATGGAGCCGCTGAAGGTGGAAAAGTTCGCAACCGCCAAGAGGGGAAACGGGCTGCGCGCCGTGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000403792.7 ENST00000470863.1 ENST00000490107.6 |
||
| CDS GCA 72 bp | GAAGGCAGCGGTCGCAGACGACGCCACGACTCCCCTTaGACACCGTGTACGCCAAGGGATCCGAGCGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGSGRRRRHDSP*TPCTPRDPSGR Trigger: TCTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCGACCGCTGCCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403792.7 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 |
||
| CDS CAA 72 bp | GGGTCACGGCGCGCAGCCCGTTTCCCCTCTTGGCGGTaGCGAACTTTTCCACCTTCAGCGGCTCCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GSRRAARFPSWR*RTFPPSAAPSS Trigger: GGAGGATGGAGCCGCTGAAGGTGGAAAAGTTCGCAACCGCCAAGAGGGGAAACGGGCTGCGCGCCGTGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000403792.7 ENST00000470863.1 ENST00000490107.6 |
||
| CDS CAA 72 bp | AGAAGGCAGCGGTCGCAGACGACGCCACGACTCCCCTaGCACACCGTGTACGCCAAGGGATCCGAGCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRQRSQTTPRLP*HTVYAKGSERK Trigger: CTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCGACCGCTGCCTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403792.7 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 |
||
| CDS CAA 90 bp | TCCTTCCCGAGAAGGCAGCGGTCGCAGACGACGCCACGACTCCCCTaGCACACCGTGTACGCCAAGGGATCCGAGCGGAAGAGTAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFPRRQRSQTTPRLP*HTVYAKGSERKSSS Trigger: AGAGCTACTCTTCCGCTCGGATCCCTTGGCGTACACGGTGTGCAAGGGGAGTCGTGGCGTCGTCTGCGACCGCTGCCTTCTCGGGAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000403792.7 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 |
||
| CDS CCA 72 bp | CCCACCTCGATGTCTCGGACTGCTCGCAGTAAGAGGTaGGGCCCATTGAACACAATCGAACAGTTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PTSMSRTARSKR*GPLNTIEQLGS Trigger: TGACCCCAACTGTTCGATTGTGTTCAATGGGCCCCACCTCTTACTGCGAGCAGTCCGAGACATCGAGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS TCA 72 bp | CAGAAAGCGAAGTATCCCGTGACTGAGCCTGTCGTCTaGTGCGTGTTGGTGAAGACCACAGGGAGCACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QKAKYPVTEPVV*CVLVKTTGSTG Trigger: TCCAGTGCTCCCTGTGGTCTTCACCAACACGCATCAGACGACAGGCTCAGTCACGGGATACTTCGCTTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS TCA 72 bp | TACCATAGAACAAGGCTTCCTCCAACAGGCCGAGGTTaGTGCAGGCATCCATGGCGCAGTCGAGCACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YHRTRLPPTGRG*CRHPWRSRAPS Trigger: TGAAGGTGCTCGACTGCGCCATGGATGCCTGCATCAACCTCGGCCTGTTGGAGGAAGCCTTGTTCTATGGTA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000470510.5 ENST00000483072.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS CCA 72 bp | GTTTGGCAACGGAAACAGTCACATTCAAAGCAGTACTaGTCCCTCAGCTGCTTCCGGCGCTCCTCACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VWQRKQSHSKQY*SLSCFRRSSLV Trigger: GACCAGTGAGGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTTCCGTTGCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS TCA 72 bp | TGTCTCGGACTGCTCGCAGTAAGAGGTGGGGCCCATTaGACACAATCGAACAGTTGGGGTCACAGCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CLGLLAVRGGAH*TQSNSWGHSCD Trigger: ATCACAGCTGTGACCCCAACTGTTCGATTGTGTTCAATGGGCCCCACCTCTTACTGCGAGCAGTCCGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS CCA 72 bp | TCGGGAAGCCGTTCAGAATTGCTGCTTATGATTGCCTaGCACATGGCCAGAACCTGCTCCCACTTCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SGSRSELLLMIA*HMARTCSHFQC Trigger: ACACTGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCAATCATAAGCAGCAATTCTGAACGGCTTCCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS GCA 72 bp | AAACAGTCACATTCAAAGCAGTACTGGTCCCTCAGCTaGTTCCGGCGCTCCTCACTGGTCATCAGCATATCC | + |
|
Preference number: 6 (lower is better) Translates to: KQSHSKQYWSLS*FRRSSLVISIS Trigger: GGATATGCTGATGACCAGTGAGGAGCGCCGGAAGCAGCTGAGGGACCAGTACTGCTTTGAATGTGACTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS GCA 72 bp | GATATCGGGAAGCCGTTCAGAATTGCTGCTTATGATTaGCTGGCACATGGCCAGAACCTGCTCCCACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DIGKPFRIAAYD*LAHGQNLLPLP Trigger: TGGAAGTGGGAGCAGGTTCTGGCCATGTGCCAGGCAATCATAAGCAGCAATTCTGAACGGCTTCCCGATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
||
| CDS TCA 72 bp | TCTCTTACTCCTACAGAAAGCGAAGTATCCCGTGACTaGGCCTGTCGTCTGATGCGTGTTGGTGAAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLTPTESEVSRD*ACRLMRVGEDH Trigger: GTGGTCTTCACCAACACGCATCAGACGACAGGCTCAGTCACGGGATACTTCGCTTTCTGTAGGAGTAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS CCA 72 bp | CGTCTGATGCGTGTTGGTGAAGACCACAGGGAGCACTaGAGGTCATTTAGTCAAGCCATGGTATTTACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLMRVGEDHREH*RSFSQAMVFTR Trigger: CCTGGTAAATACCATGGCTTGACTAAATGACCTCCAGTGCTCCCTGTGGTCTTCACCAACACGCATCAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS CAA 90 bp | ACAACTCTGCCAAGAAGTCGAACGGAGTCTGGAGGATATCTGGGTTaGCAGCTTTTAAGGCATTTGCATTCCCGCTTGTGGTCTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TTLPRSRTESGGYLG*QLLRHLHSRLWSGQ Trigger: TTGGCCAGACCACAAGCGGGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCCAGACTCCGTTCGACTTCTTGGCAGAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000403792.7 ENST00000453676.5 ENST00000455277.2 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 ENST00000630181.2 |
||
| CDS TCA 72 bp | CATCACAGGCACAGTTACCTCGCAGGAGAATGTCTCTaGAGCCCCTTAGAGTCATTATGCAAGAGGTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HHRHSYLAGECL*SPLESLCKRSH Trigger: GTGAGACCTCTTGCATAATGACTCTAAGGGGCTTCAGAGACATTCTCCTGCGAGGTAACTGTGCCTGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391836.3 |
||
| CDS GCA 72 bp | AGTAGGGGTGTTGCAGCAGAGAAAGAGTTTAATTACTaGAAGGCAGCTGAGCAGAAGGAGGGGAGGTATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRGVAAEKEFNY*KAAEQKEGRYL Trigger: GAGATACCTCCCCTCCTTCTGCTCAGCTGCCTTGCAGTAATTAAACTCTTTCTCTGCTGCAACACCCCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630181.2 |
||
| CDS CCA 72 bp | ACCACAGGGAGCACTGGAGGTCATTTAGTCAAGCCATaGTATTTACCAGGAGTCCATCACTGGGTACATGAC | + |
|
Preference number: 6 (lower is better) Translates to: TTGSTGGHLVKP*YLPGVHHWVHD Trigger: GTCATGTACCCAGTGATGGACTCCTGGTAAATACCATGGCTTGACTAAATGACCTCCAGTGCTCCCTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS CCA 72 bp | CAAAAGGTTCACAACAGCAGTTCCTCAGCCAAGTCGTaGGAAAGGCTGTATCACATTCCGGTCTTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QKVHNSSSSAKS*ERLYHIPVFCF Trigger: GAAGCAGAAGACCGGAATGTGATACAGCCTTTCCCACGACTTGGCTGAGGAACTGCTGTTGTGAACCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391836.3 |
||
| CDS CAA 72 bp | CCAAGAAGTCGAACGGAGTCTGGAGGATATCTGGGTTaGCAGCTTTTAAGGCATTTGCATTCCCGCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRSRTESGGYLG*QLLRHLHSRLW Trigger: CCACAAGCGGGAATGCAAATGCCTTAAAAGCTGCAAACCCAGATATCCTCCAGACTCCGTTCGACTTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000403792.7 ENST00000453676.5 ENST00000455277.2 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 ENST00000630181.2 |
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| CDS CCA 72 bp | TTAGTCAAGCCATGGTATTTACCAGGAGTCCATCACTaGGTACATGACACAGTCCTGTCTTATGCAGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: LVKPWYLPGVHH*VHDTVLSYAGT Trigger: CGTCCCTGCATAAGACAGGACTGTGTCATGTACCCAGTGATGGACTCCTGGTAAATACCATGGCTTGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS CAA 90 bp | CTACTAGAGACTAAGAGCATGGCCTTTGGAGTGACCAGATCTCCTTaGAATCCCAGTTCCAACATTTGTTGGCTCTGTAACGCTCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLETKSMAFGVTRSP*NPSSNICWLCNAQV Trigger: CACCTGAGCGTTACAGAGCCAACAAATGTTGGAACTGGGATTCAAAGGAGATCTGGTCACTCCAAAGGCCATGCTCTTAGTCTCTAGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462422.5 |
||
| CDS TCA 72 bp | CAACACCAACTTCCTGCATCTCCGCATTACAGATGGTaGAAGAGTTGCAGATCACCTGTAAACACAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QHQLPASPHYRW*KSCRSPVNTRG Trigger: TCCCCTTGTGTTTACAGGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS TCA 72 bp | CTGATGGTGCTCATAAGCAAACGGCACCTGCCCACTTaGAATGTAACCATCTTCTTCTGTAGCTTCTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LMVLISKRHLPT*NVTIFFCSFCS Trigger: GCTACAGAAGCTACAGAAGAAGATGGTTACATTTCAAGTGGGCAGGTGCCGTTTGCTTATGAGCACCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488153.5 ENST00000493441.5 |
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| CDS CCA 72 bp | GGGTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GFCKGFKKVKGR*QLRGILYFFSH Trigger: ATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403792.7 |
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| CDS CAA 72 bp | ACTTCCTGCATCTCCGCATTACAGATGGTGAAAGAGTaGCAGATCACCTGTAAACACAAGGGGAACCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSCISALQMVKE*QITCKHKGNHQ Trigger: CTGATGGTTCCCCTTGTGTTTACAGGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366516.5 |
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| CDS TCA 72 bp | CCATTGAACACAATCGAACAGTTGGGGTCACAGCTGTaGTTGAGCAAAGAGATACTGGGATATAGGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: PLNTIEQLGSQL*LSKEILGYRPT Trigger: TGTTGGCCTATATCCCAGTATCTCTTTGCTCAATCACAGCTGTGACCCCAACTGTTCGATTGTGTTCAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
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| CDS GCA 72 bp | AAAGAGATACTGGGATATAGGCCAACACCAACTTCCTaGATCTCCGCATTACAGATGGTGAAAGAGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KEILGYRPTPTS*ISALQMVKELQ Trigger: CTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTGGCCTATATCCCAGTATCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000366516.5 ENST00000366517.5 ENST00000391836.3 ENST00000464398.1 ENST00000470510.5 ENST00000488153.5 ENST00000490107.6 ENST00000492487.5 ENST00000493441.5 ENST00000630181.2 |
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| CDS GCA 72 bp | GCAGATCACCTATTCTTAGCTGAAGTGTCTAGAGGTTaGTTTGTGTCTTGCGCATCAATCTCAGAGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ADHLFLAEVSRG*FVSCASISEQA Trigger: TGCTTGCTCTGAGATTGATGCGCAAGACACAAAGCAACCTCTAGACACTTCAGCTAAGAATAGGTGATCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464398.1 |
||
| CDS CCA 72 bp | CACTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HFCKGFKKVKGR*QLRGILYFFSH Trigger: ATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000453676.5 ENST00000490107.6 ENST00000630181.2 |
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| CDS CAA 72 bp | ACTAAGAGCATGGCCTTTGGAGTGACCAGATCTCCTTaGAATCCCAGTTCCAACATTTGTTGGCTCTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: TKSMAFGVTRSP*NPSSNICWLCN Trigger: GTTACAGAGCCAACAAATGTTGGAACTGGGATTCAAAGGAGATCTGGTCACTCCAAAGGCCATGCTCTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462422.5 |
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| CDS CAA 90 bp | AGGTGGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCATGAAATGTaGAAATGTCATTACGAGTTGCCTGAGGCCCTCTTTCTTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWQLRGILYFFSHEM*KCHYELPEALFLIF Trigger: GAAGATAAGAAAGAGGGCCTCAGGCAACTCGTAATGACATTTCAACATTTCATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000403792.7 ENST00000453676.5 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 ENST00000630181.2 |
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| CDS TCA 72 bp | CAACACCAACTTCCTGCATCTCCGCATTACAGATGGTaGAAGAGTTGCAGATCACTTTTGCAAAGGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QHQLPASPHYRW*KSCRSLLQRLQ Trigger: TTGAAGCCTTTGCAAAAGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000490107.6 ENST00000630181.2 |
||
| CDS CCA 72 bp | TTTGAAGACAACTCTGCCAAGAAGTCGAACGGAGTCTaGAGGATATCTGGGTTTGCAGCTTTTAAGGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: FEDNSAKKSNGV*RISGFAAFKAF Trigger: AAATGCCTTAAAAGCTGCAAACCCAGATATCCTCCAGACTCCGTTCGACTTCTTGGCAGAGTTGTCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000403792.7 ENST00000453676.5 ENST00000455277.2 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 ENST00000630181.2 |
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| CDS CCA 72 bp | TCTTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFCKGFKKVKGR*QLRGILYFFSH Trigger: ATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000462422.5 |
||
| CDS CCA 72 bp | TACTTTTGCAAAGGCTTCAAAAAGGTCAAAGGCAGGTaGCAGCTGAGAGGCATCCTGTATTTCTTCTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YFCKGFKKVKGR*QLRGILYFFSH Trigger: ATGAGAGAAGAAATACAGGATGCCTCTCAGCTGCCACCTGCCTTTGACCTTTTTGAAGCCTTTGCAAAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470863.1 |
||
| CDS CAA 72 bp | CCAAATGCCACTGTGTATCTGTTCAGTGATAGCAACTaGTCTCTTACTCCTACAGAAAGCGAAGTATCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PNATVYLFSDSN*SLTPTESEVSR Trigger: ACGGGATACTTCGCTTTCTGTAGGAGTAAGAGACAAGTTGCTATCACTGAACAGATACACAGTGGCATTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS TCA 72 bp | AACATTTGTTGGCTCTGTAACGCTCAGGTGCAGTTATaGCATCTGAACACAGTGAGAACAATCCATGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NICWLCNAQVQL*HLNTVRTIHVQ Trigger: CTGAACATGGATTGTTCTCACTGTGTTCAGATGTCATAACTGCACCTGAGCGTTACAGAGCCAACAAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462422.5 |
||
| CDS TCA 72 bp | CAACACCAACTTCCTGCATCTCCGCATTACAGATGGTaGAAGAGTTGCAGATCACCTTCAAGTTTAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QHQLPASPHYRW*KSCRSPSSLER Trigger: TCTTTCTAAACTTGAAGGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492487.5 |
||
| CDS TCA 72 bp | CAACACCAACTTCCTGCATCTCCGCATTACAGATGGTaGAAGAGTTGCAGATCACCTCAAAGAATTGTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: QHQLPASPHYRW*KSCRSPQRIVK Trigger: CTTAACAATTCTTTGAGGTGATCTGCAACTCTTTCACCATCTGTAATGCGGAGATGCAGGAAGTTGGTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488153.5 ENST00000493441.5 |
||
| CDS TCA 72 bp | CAGGCTCTATGCTTAAACAACCACCATAAAACTCAATaGATGCAATGCAACGGCAAACAAGTCCATTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: QALCLNNHHKTQ*MQCNGKQVHSQ Trigger: TTGTGAATGGACTTGTTTGCCGTTGCATTGCATTCATTGAGTTTTATGGTGGTTGTTTAAGCATAGAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470863.1 |
||
| CDS TCA 72 bp | TCACCTTCAAGTTTAGAAAGAGCTATTGTTGATAGGTaGGCCATGTACTCACACAACTTACAGTGGATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSLERAIVDR*AMYSHNLQWIC Trigger: GCAAATCCACTGTAAGTTGTGTGAGTACATGGCTCACCTATCAACAATAGCTCTTTCTAAACTTGAAGGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492487.5 |
||
| CDS CAA 72 bp | CTCAAGGAACTTAAAAACCTCGTTTGTGAAATAAGGTaGATGTATGAGGTCACACAGAACCATGGAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LKELKNLVCEIR*MYEVTQNHGKS Trigger: GCTCTTTCCATGGTTCTGTGTGACCTCATACATCAACCTTATTTCACAAACGAGGTTTTTAAGTTCCTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS CAA 90 bp | CTTAGTAGTTGCTTAAGAAAGAGCCAAGCCAATCATGGATGCTCTTaGACTTACAACAGAATTTATCTGGGATATACTCCCCCTAAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSSCLRKSQANHGCS*TYNRIYLGYTPPKN Trigger: GTTTTTAGGGGGAGTATATCCCAGATAAATTCTGTTGTAAGTCAAAGAGCATCCATGATTGGCTTGGCTCTTTCTTAAGCAACTACTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366516.5 |
||
| CDS CAA 90 bp | ATCCTGTATTTCTTCTCTCATGAAATGTTGAAATGTCATTACGAGTaGCCTGAGGCCCTCTTTCTTATCTTCAGTCAGTTTGTTAATATT | + |
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Preference number: 6 (lower is better) Translates to: ILYFFSHEMLKCHYE*PEALFLIFSQFVNI Trigger: AATATTAACAAACTGACTGAAGATAAGAAAGAGGGCCTCAGGCAACTCGTAATGACATTTCAACATTTCATGAGAGAAGAAATACAGGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000403792.7 ENST00000453676.5 ENST00000462422.5 ENST00000470863.1 ENST00000490107.6 ENST00000630181.2 |
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| CDS CAA 72 bp | GAAAAGAAAGCATACTCTTTCTTCCAAGGGTACACTTaGAGAATTCACAATGAACATACTCAGGCAATAACA | + |
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Preference number: 6 (lower is better) Translates to: EKKAYSFFQGYT*RIHNEHTQAIT Trigger: TGTTATTGCCTGAGTATGTTCATTGTGAATTCTCAAAGTGTACCCTTGGAAGAAAGAGTATGCTTTCTTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470863.1 |
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