RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMYD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115593

Ensembl transcript IDs: ENST00000419482.7, ENST00000438570.1, ENST00000444564.2, ENST00000468008.1

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCACATATCCTGCTCAGCCAATTGTGTCTACTGCAGACCACAGGTaGGACCAGCAGCCCCAGAGACACCTGCACAGATGGGTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: ITYPAQPIVSTADHR*DQQPQRHLHRWVSS
Trigger: GCTGCTCACCCATCTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACAATTGGCTGAGCAGGATATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR GCA 90 bp ACACCTGCACAGATGGGTGAGCAGCCACCTGAGACTCCAGGCACCTaGTACCCTCAACTCAGATGTCATACTCTCTGTGATACCCCCACT +
Preference number: 1 (lower is better)
Translates to: TPAQMGEQPPETPGT*YPQLRCHTLCDTPT
Trigger: AGTGGGGGTATCACAGAGAGTATGACATCTGAGTTGAGGGTAGCAGGTGCCTGGAGTCTCAGGTGGCTGCTCACCCATCTGTGCAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR GCA 90 bp CCAACCACACAGTATCACATATCCTGCTCAGCCAATTGTGTCTACTaGAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAG +
Preference number: 1 (lower is better)
Translates to: PTTQYHISCSANCVY*RPQVRPAAPETPAQ
Trigger: CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACAATTGGCTGAGCAGGATATGTGATACTGTGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 90 bp TTTGGGCAAGGCCCCCAGCCAGCTCTTTCGACATATGCACCATTCTaGAGTGGTTTCAGGTCTCTGAGTAGAGCCTACGTGGCCCAAACA +
Preference number: 1 (lower is better)
Translates to: FGQGPQPALSTYAPF*SGFRSLSRAYVAQT
Trigger: TGTTTGGGCCACGTAGGCTCTACTCAGAGACCTGAAACCACTTCAGAATGGTGCATATGTCGAAAGAGCTGGCTGGGGGCCTTGCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 90 bp GACTCCAGGCACCTGCTACCCTCAACTCAGATGTCATACTCTCTGTaGTACCCCCACTGCACACACACACATCACACACCAGACACATTC +
Preference number: 1 (lower is better)
Translates to: DSRHLLPSTQMSYSL*YPHCTHTHHTPDTF
Trigger: GAATGTGTCTGGTGTGTGATGTGTGTGTGTGCAGTGGGGGTATCACAGAGAGTATGACATCTGAGTTGAGGGTAGCAGGTGCCTGGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 90 bp GACATGATGAGTTTGCTGGGCCTGCAGAACATCCGAGAGGATGAGTaGGGCTGGAGCTCAAATGCAAGATCGGGGAATACAGATTTGAGA +
Preference number: 1 (lower is better)
Translates to: DMMSLLGLQNIREDE*GWSSNARSGNTDLR
Trigger: TCTCAAATCTGTATTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACTCATCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 90 bp TTTGGACATGATGAGTTTGCTGGGCCTGCAGAACATCCGAGAGGATaGGTGGGGCTGGAGCTCAAATGCAAGATCGGGGAATACAGATTT +
Preference number: 1 (lower is better)
Translates to: FGHDEFAGPAEHPRG*VGLELKCKIGEYRF
Trigger: AAATCTGTATTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACTCATCATGTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR GCA 90 bp CCCCTTCTTCAAAACTCCACACCAACCACACAGTATCACATATCCTaGTCAGCCAATTGTGTCTACTGCAGACCACAGGTGAGACCAGCA +
Preference number: 1 (lower is better)
Translates to: PLLQNSTPTTQYHIS*SANCVYCRPQVRPA
Trigger: TGCTGGTCTCACCTGTGGTCTGCAGTAGACACAATTGGCTGAGCAGGATATGTGATACTGTGTGGTTGGTGTGGAGTTTTGAAGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 90 bp GTCAAGGATCCAGGATGGAGAAGCAATAATAGATGGAGCAAAGTCTaGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGG +
Preference number: 1 (lower is better)
Translates to: VKDPGWRSNNRWSKV*GSKQGKGSRVHSKG
Trigger: CCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCTCCATCCTGGATCCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 90 bp ATGAGTTTGCTGGGCCTGCAGAACATCCGAGAGGATGAGTGGGGCTaGAGCTCAAATGCAAGATCGGGGAATACAGATTTGAGAATCATC +
Preference number: 1 (lower is better)
Translates to: MSLLGLQNIREDEWG*SSNARSGNTDLRII
Trigger: GATGATTCTCAAATCTGTATTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 90 bp CAATATGTCAGGGGCAGGGAAAGAAAAAGGACCAGCGAAGGAACCTaGGAAACTAGATCAGAAGATCATCACAGGGAAGTGGGTCACCAA +
Preference number: 1 (lower is better)
Translates to: QYVRGRERKRTSEGT*ETRSEDHHREVGHQ
Trigger: TTGGTGACCCACTTCCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTCTTTCCCTGCCCCTGACATATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 90 bp ATGAGTGGGGCTGGAGCTCAAATGCAAGATCGGGGAATACAGATTTaGGAATCATCAGCCCTAAGGTGGTCATTAAATGAAGGGTCTGCC +
Preference number: 1 (lower is better)
Translates to: MSGAGAQMQDRGIQI*ESSALRWSLNEGSA
Trigger: GGCAGACCCTTCATTTAATGACCACCTTAGGGCTGATGATTCTCAAATCTGTATTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 90 bp ATCACAACAGCCTTCCAGGAGATCGGGATAAATTGGCCACACCTCTaGACAGGGTCTAACCCAGGTGTACAAGAATCCAGATTCAAATGT +
Preference number: 1 (lower is better)
Translates to: ITTAFQEIGINWPHL*TGSNPGVQESRFKC
Trigger: ACATTTGAATCTGGATTCTTGTACACCTGGGTTAGACCCTGTTCAGAGGTGTGGCCAATTTATCCCGATCTCCTGGAAGGCTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 90 bp ACTAGATCAGAAGATCATCACAGGGAAGTGGGTCACCAAAATCAATaGCTGGGAGTGATGATTGACATCGAAAGGCCAAATCACATAGGA +
Preference number: 1 (lower is better)
Translates to: TRSEDHHREVGHQNQ*LGVMIDIERPNHIG
Trigger: TCCTATGTGATTTGGCCTTTCGATGTCAATCATCACTCCCAGCCATTGATTTTGGTGACCCACTTCCCTGTGATGATCTTCTGATCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 90 bp AAGAGCCCTTTTAGTGAAGGAGTGGGAGTGGAAGTCAATCTGCAATaGATTCAAGAAGAAATGCAAAGTGAAGAAAGGCAGATGATAACT +
Preference number: 1 (lower is better)
Translates to: KSPFSEGVGVEVNLQ*IQEEMQSEERQMIT
Trigger: AGTTATCATCTGCCTTTCTTCACTTTGCATTTCTTCTTGAATCCATTGCAGATTGACTTCCACTCCCACTCCTTCACTAAAAGGGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 90 bp AAACTCCACACCAACCACACAGTATCACATATCCTGCTCAGCCAATaGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: KLHTNHTVSHILLSQ*CLLQTTGETSSPRD
Trigger: GTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACAATTGGCTGAGCAGGATATGTGATACTGTGTGGTTGGTGTGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR TCA 90 bp ACTCCAGGAAATGTCAATATGTCAGGGGCAGGGAAAGAAAAAGGACCAGCGAAGGTGGTTTCAGGTCTCTaGGTAGAGCCTACGTGGCCC +
Preference number: 2 (lower is better)
Translates to: TPGNVNMSGAGKEKGPAKVVSGL*VEPTWP
Trigger: GGGCCACGTAGGCTCTACTCAGAGACCTGAAACCAC...CTTCGCTGGTCCTTTTTCTTTCCCTGCCCCTGACATATTGACATTTCCTGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR GCA 90 bp CCTGAGAAGGCCAGTGGGGTGACAAATGTCAAGGATCCAGGATGGAGAAGCAATGAGACTCCAGGCACCTaGTACCCTCAACTCAGATGT +
Preference number: 2 (lower is better)
Translates to: PEKASGVTNVKDPGWRSNETPGT*YPQLRC
Trigger: ACATCTGAGTTGAGGGTAGCAGGTGCCTGGAGTCTC...ATTGCTTCTCCATCCTGGATCCTTGACATTTGTCACCCCACTGGCCTTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 90 bp GAGGAGACAGGAAAGAGAAAAAGTTTCACTTTGGACATGATGAGTTaGCTGGGCCTGCAGAACATCCGAGAGGATGAGTGGGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: EETGKRKSFTLDMMS*LGLQNIREDEWGWS
Trigger: GCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACTCATCATGTCCAAAGTGAAACTTTTTCTCTTTCCTGTCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 90 bp GGTACAGCTCTGAGGTCAATGGTAGTCCTGGGTTGTGTAGAAGTCTaGGTGACACCCCAAACTGAAGGGATCTTTTCCAGGATCTCCCAA +
Preference number: 2 (lower is better)
Translates to: GTALRSMVVLGCVEV*VTPQTEGIFSRISQ
Trigger: TTGGGAGATCCTGGAAAAGATCCCTTCAGTTTGGGGTGTCACCAAGACTTCTACACAACCCAGGACTACCATTGACCTCAGAGCTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CCA 90 bp GTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGTTGGAGCTCCTTTATTaGGTTCTAGGGCCTATCATC +
Preference number: 2 (lower is better)
Translates to: VWGSKQGKGSRVHSKGKKLELLY*VLGPII
Trigger: GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAA...CTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CCA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGAGATGGAGCAAAGTCTaGGGGTCAAAGCAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGRWSKV*GSKQGK
Trigger: CTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCT...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR TCA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGGGTGACACCCCAAACTaGAGGGATCTTTTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGGDTPN*RDLFQD
Trigger: ATCCTGGAAAAGATCCCTTCAGTTTGGGGTGTCACC...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR TCA 90 bp ACTAGATCAGAAGATCATCACAGGGAAGTGGGTCACCAAAATCAATGGCTGGGAATTCTGCAGGGCCCATaGTCAACAGGTATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: TRSEDHHREVGHQNQWLGILQGP*STGMCV
Trigger: AACACACATACCTGTTGATCATGGGCCCTGCAGAAT...TCCCAGCCATTGATTTTGGTGACCCACTTCCCTGTGATGATCTTCTGATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CCA 90 bp ACTAGATCAGAAGATCATCACAGGGAAGTGGGTCACCAAAATCAATGGCTGGGAGTGAAGGAGTGGGAGTaGAAGTCAATCTGCAATGGA +
Preference number: 2 (lower is better)
Translates to: TRSEDHHREVGHQNQWLGVKEWE*KSICNG
Trigger: TCCATTGCAGATTGACTTCCACTCCCACTCCTTCAC...TCCCAGCCATTGATTTTGGTGACCCACTTCCCTGTGATGATCTTCTGATCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR GCA 90 bp ACTCCAGGAAATGTCAATATGTCAGGGGCAGGGAAAGAAAAAGGACCAGCGAAGTGTTTCTCTACATTTTaGTTCCCCACCCAACGACAT +
Preference number: 2 (lower is better)
Translates to: TPGNVNMSGAGKEKGPAKCFSTF*FPTQRH
Trigger: ATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACA...CTTCGCTGGTCCTTTTTCTTTCCCTGCCCCTGACATATTGACATTTCCTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CCA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGCTTTTAGTGAAGGAGTaGGAGTGGAAGTCAATCTGC +
Preference number: 2 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGLLVKE*EWKSIC
Trigger: GCAGATTGACTTCCACTCCCACTCCTTCACTAAAAG...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR TCA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGAATTGGCCACACCTCTaGACAGGGTCTAACCCAGGT +
Preference number: 2 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLNWPHL*TGSNPG
Trigger: ACCTGGGTTAGACCCTGTTCAGAGGTGTGGCCAATT...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR GCA 90 bp CCACAAGGCTTGGTAATAAGGGTGATAGAGGGACTTATTCCCTCTCTGTGTGTTCAGTATCACATATCCTaGTCAGCCAATTGTGTCTAC +
Preference number: 2 (lower is better)
Translates to: PQGLVIRVIEGLIPSLCVQYHIS*SANCVY
Trigger: GTAGACACAATTGGCTGAGCAGGATATGTGATACTG...AACACACAGAGAGGGAATAAGTCCCTCTATCACCCTTATTACCAAGCCTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 90 bp CTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTCCTTTATaGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: LYILLPHPTTFGAPL*GSRAYHPIIFVGGV
Trigger: AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
3UTR CAA 90 bp AGGCCAAATCACATAGGAACTAAAATGTACCCATTAGATTTGATCTaGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGTGGAAGTCAATC +
Preference number: 2 (lower is better)
Translates to: RPNHIGTKMYPLDLI*VRALLVKEWEWKSI
Trigger: GATTGACTTCCACTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACATTTTAGTTCCTATGTGATTTGGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CCA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGTTGATCTGGGCTaGGCTAGAGTTAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVGVDLG*ARVNLN
Trigger: ATTCAAGTTAACTCTAGCCCAGCCCAGATCAACTCC...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
3UTR TCA 72 bp CCTGCTCAGCCAATTGTGTCTACTGCAGACCACAGGTaGGACCAGCAGCCCCAGAGACACCTGCACAGATGG +
Preference number: 3 (lower is better)
Translates to: PAQPIVSTADHR*DQQPQRHLHRW
Trigger: CCATCTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACAATTGGCTGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp GATGAGTTTGCTGGGCCTGCAGAACATCCGAGAGGATaGGTGGGGCTGGAGCTCAAATGCAAGATCGGGGAA +
Preference number: 3 (lower is better)
Translates to: DEFAGPAEHPRG*VGLELKCKIGE
Trigger: TTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp GGCCCCCAGCCAGCTCTTTCGACATATGCACCATTCTaGAGTGGTTTCAGGTCTCTGAGTAGAGCCTACGTG +
Preference number: 3 (lower is better)
Translates to: GPQPALSTYAPF*SGFRSLSRAYV
Trigger: CACGTAGGCTCTACTCAGAGACCTGAAACCACTTCAGAATGGTGCATATGTCGAAAGAGCTGGCTGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR GCA 72 bp CAGATGGGTGAGCAGCCACCTGAGACTCCAGGCACCTaGTACCCTCAACTCAGATGTCATACTCTCTGTGAT +
Preference number: 3 (lower is better)
Translates to: QMGEQPPETPGT*YPQLRCHTLCD
Trigger: ATCACAGAGAGTATGACATCTGAGTTGAGGGTAGCAGGTGCCTGGAGTCTCAGGTGGCTGCTCACCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp CTGGGCCTGCAGAACATCCGAGAGGATGAGTGGGGCTaGAGCTCAAATGCAAGATCGGGGAATACAGATTTG +
Preference number: 3 (lower is better)
Translates to: LGLQNIREDEWG*SSNARSGNTDL
Trigger: CAAATCTGTATTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp AGTTTGCTGGGCCTGCAGAACATCCGAGAGGATGAGTaGGGCTGGAGCTCAAATGCAAGATCGGGGAATACA +
Preference number: 3 (lower is better)
Translates to: SLLGLQNIREDE*GWSSNARSGNT
Trigger: TGTATTCCCCGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp GCAAAAGTGTGGCCCATTTGCAGAGTTTTCAGCCACTaGGTAGTGCTCAGAGGGACACAGCAGGTCATCATG +
Preference number: 3 (lower is better)
Translates to: AKVWPICRVFSH*VVLRGTQQVIM
Trigger: CATGATGACCTGCTGTGTCCCTCTGAGCACTACCCAGTGGCTGAAAACTCTGCAAATGGGCCACACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp CACCTGCTACCCTCAACTCAGATGTCATACTCTCTGTaGTACCCCCACTGCACACACACACATCACACACCA +
Preference number: 3 (lower is better)
Translates to: HLLPSTQMSYSL*YPHCTHTHHTP
Trigger: TGGTGTGTGATGTGTGTGTGTGCAGTGGGGGTATCACAGAGAGTATGACATCTGAGTTGAGGGTAGCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp GCCTTCCAGGAGATCGGGATAAATTGGCCACACCTCTaGACAGGGTCTAACCCAGGTGTACAAGAATCCAGA +
Preference number: 3 (lower is better)
Translates to: AFQEIGINWPHL*TGSNPGVQESR
Trigger: TCTGGATTCTTGTACACCTGGGTTAGACCCTGTTCAGAGGTGTGGCCAATTTATCCCGATCTCCTGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp ACGTGGGACCTGGTGGGATCAATTTACTTCAAGATGTaGGGTACAGCTCTGAGGTCAATGGTAGTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: TWDLVGSIYFKM*GTALRSMVVLG
Trigger: ACCCAGGACTACCATTGACCTCAGAGCTGTACCCCACATCTTGAAGTAAATTGATCCCACCAGGTCCCACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CAA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGACCCACCCAACGACATTaGGAGCTCCTTTATTGGGTT +
Preference number: 3 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRPTQRH*ELLYWV
Trigger: AACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGG...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CAA 90 bp GGACCTGGTGGGATCAATTTACTTCAAGATGTGGGGTACAGCTCTGAGGTCAATGGAGATCGGGATAAATaGGCCACACCTCTGAACAGG +
Preference number: 3 (lower is better)
Translates to: GPGGINLLQDVGYSSEVNGDRDK*ATPLNR
Trigger: CCTGTTCAGAGGTGTGGCCAATTTATCCCGATCTCC...ATTGACCTCAGAGCTGTACCCCACATCTTGAAGTAAATTGATCCCACCAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp ATCCCTGGGAGAAAGTTAGTGCCGTCCCTAAGCCTGTaGTGTGGGGGCTTGAAAGACTATCAGTCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: IPGRKLVPSLSL*CGGLKDYQSSC
Trigger: ACAAGAAGACTGATAGTCTTTCAAGCCCCCACATCACAGGCTTAGGGACGGCACTAACTTTCTCCCAGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp AGGGGCAGGGAAAGAAAAAGGACCAGCGAAGGAACCTaGGAAACTAGATCAGAAGATCATCACAGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: RGRERKRTSEGT*ETRSEDHHREV
Trigger: CACTTCCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTCTTTCCCTGCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CAA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGAGGATCTCCCAAAACATaGGTGAGAAATTTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRGSPKT*VRNLGS
Trigger: AGACCCCAAATTTCTCACCAATGTTTTGGGAGATCC...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp GAAGATCATCACAGGGAAGTGGGTCACCAAAATCAATaGCTGGGAGTGATGATTGACATCGAAAGGCCAAAT +
Preference number: 3 (lower is better)
Translates to: EDHHREVGHQNQ*LGVMIDIERPN
Trigger: ATTTGGCCTTTCGATGTCAATCATCACTCCCAGCCATTGATTTTGGTGACCCACTTCCCTGTGATGATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CAA 90 bp ATGTACCCATTAGATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGATGTTTCTCTACATTTaGCTTCCCCACCCAACGACA +
Preference number: 3 (lower is better)
Translates to: MYPLDLILVRALLVKEWEMFLYI*LPHPTT
Trigger: TGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACAT...CTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp TTCTTTCTGGTGAGAAGAGCAGAAGCCCCCAGGGCATaGCAGAAAAAGAAACTCAACAAGGGAAGTAATAAT +
Preference number: 3 (lower is better)
Translates to: FFLVRRAEAPRA*QKKKLNKGSNN
Trigger: ATTATTACTTCCCTTGTTGAGTTTCTTTTTCTGTCATGCCCTGGGGGCTTCTGCTCTTCTCACCAGAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp GCTGGAGCTCAAATGCAAGATCGGGGAATACAGATTTaGGAATCATCAGCCCTAAGGTGGTCATTAAATGAA +
Preference number: 3 (lower is better)
Translates to: AGAQMQDRGIQI*ESSALRWSLNE
Trigger: TTCATTTAATGACCACCTTAGGGCTGATGATTCTCAAATCTGTATTCCCCGATCTTGCATTTGAGCTCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp ATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGTaGAAGTCAATCTGCAATGGATTCAAGAAGAAATGC +
Preference number: 3 (lower is better)
Translates to: ILVRALLVKEWE*KSICNGFKKKC
Trigger: GCATTTCTTCTTGAATCCATTGCAGATTGACTTCCACTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CCA 72 bp GATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTaGGAGTGGAAGTCAATCTGCAATGGATTCAAGAAG +
Preference number: 3 (lower is better)
Translates to: DLILVRALLVKE*EWKSICNGFKK
Trigger: CTTCTTGAATCCATTGCAGATTGACTTCCACTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CAA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGTCAGATACAAGTATTTaGCAAAAGTGTGGCCCATTT +
Preference number: 3 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGSDTSI*QKCGPF
Trigger: AAATGGGCCACACTTTTGCAAAATACTTGTATCTGA...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR GCA 72 bp GCCCTTTTAGTGAAGGAGTGGGAGTGGAAGTCAATCTaGAATGGATTCAAGAAGAAATGCAAAGTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: ALLVKEWEWKSI*NGFKKKCKVKK
Trigger: TTTCTTCACTTTGCATTTCTTCTTGAATCCATTGCAGATTGACTTCCACTCCCACTCCTTCACTAAAAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR-3UTR CAA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGTTGAATAGACTTGAATaGAGCCAAAATGGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLLNRLE*SQNGSG
Trigger: CCCAGAGCCATTTTGGCTCAATTCAAGTCTATTCAA...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR TCA 72 bp GGAGACATTTTATATGAAGGTAAAAGAGTGATAATTTaGACTAGCCAGTTAGATCCCTGGGAGAAAGTTAGT +
Preference number: 3 (lower is better)
Translates to: GDILYEGKRVII*TSQLDPWEKVS
Trigger: ACTAACTTTCTCCCAGGGATCTAACTGGCTAGTTCAAATTATCACTCTTTTACCTTCATATAAAATGTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR TCA 90 bp GTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGCCAGGCAGCCCTCCGTaGGCCCGGTGCCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VWGSKQGKGSRVHSKGKKPGSPP*ARCLLS
Trigger: AGAGAGAAGGCACCGGGCTCACGGAGGGCTGCCTGG...CTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCACCAGGCAGCCCTCCGTaGGCCCGGTGCCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPPGSPP*ARCLLS
Trigger: AGAGAGAAGGCACCGGGCTCACGGAGGGCTGCCTGG...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGCCAGGTTGGGGAAGATaGCTACGCCCACGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPEPGWGR*LRPRPA
Trigger: TGCAGGCCGTGGGCGTAGGCATCTTCCCCAACCTGG...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCACCAGTTGGTCAGCCCTaGCCGCATCACGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPPVGQP*PHHGHA
Trigger: GGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGG...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCTGCGGCGGCCAGTACTaGAAGAATGTGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: LNFLIRGLPRDPPPPESLCGGQY*KNVSTS
Trigger: GGACGTGGACACATTCTTGCAGTACTGGCCGCCGCA...GAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CCTGAGAAGGCCAGTGGGGTGACAAATGTCAAGGATCCAGGATGGAGAAGCAATCCAGTTGGTCAGCCCTaGCCGCATCACGGCCATGCC +
Preference number: 4 (lower is better)
Translates to: PEKASGVTNVKDPGWRSNPVGQP*PHHGHA
Trigger: GGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGG...ATTGCTTCTCCATCCTGGATCCTTGACATTTGTCACCCCACTGGCCTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGCCAAAGTGCTCCACGTaGTTCTGCAAGTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQPKCST*FCKSST
Trigger: CGTGGACGACTTGCAGAACCACGTGGAGCACTTTGG...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTGCATGCTGAACTGCTaGCTCTGCGGCGGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPECMLNC*LCGGQY
Trigger: GTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCA...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGGAACAGAGCTGGGGATaGCTCATTGCTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPEEQSWG*LIAGLG
Trigger: GCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGTTC...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGAGATGTACTGCATGCTaGACTGCTGGCTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPERCTAC*TAGSAA
Trigger: CGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCT...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCTGCTGGGCTCGGCCATaGCCTGCATGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LSITSTSSLGVSRETHHLCWARP*PAWAGC
Trigger: ACAACCAGCCCATGCAGGTCATGGCCGAGCCCAGCA...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTTGGGCAAACTTGCACTaGCCACAGCGATGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPWANLH*PQRWSF
Trigger: GAAGCTCCATCGCTGTGGGCAGTGCAAGTTTGCCCA...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGCTGAACTGCTGGCTCTaGGGCGGCCAGTACTGCAAG +
Preference number: 4 (lower is better)
Translates to: VWGSKQGKGSRVHSKGKKLNCWL*GGQYCK
Trigger: CTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAG...CTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp ATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTTACTGCATGCTGAACTaGTGGCTCTGCGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ITSTSSLGVSRETHHLQSYCMLN*WLCGGQ
Trigger: CTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTA...ACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCTTGGGCCAACAGTCATaGTTCACCAGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LNFLIRGLPRDPPPPESLLGQQS*FTRPRL
Trigger: CAACCTGGGCCTGGTGAACCATGACTGTTGGCCCAA...GAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp TGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACCTTTGCCCTCAGCGGTaGAGACCTCCACGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: WGSKQGKGSRVHSKGKKDLCPQR*RPPRSP
Trigger: TGGAGAACGTGGAGGTCTTCACCGCTGAGGGCAAAG...GTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAAGCTCCATCTCCGTCTaGACCCGCATGGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPSSISV*TRMASK
Trigger: CTTAGAGGCCATGCGGGTGCAGACGGAGATGGAGCT...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGCTTCCTGAGAGGGCTTaGGGTTGTCTTTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPELPERA*GCLSPP
Trigger: TGGGGGTGAAAGACAACCCCAAGCCCTCTCAGGAAG...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGCCTGCAGGCCTCTCTaGTCACTGAGAGTAAAACCG +
Preference number: 4 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPACRPL*SLRVKP
Trigger: CGGTTTTACTCTCAGTGATCAGAGAGGCCTGCAGGC...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCCGTCCCTAAGCCTGTaGTGTGGGGGCTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLPSLSL*CGGLKD
Trigger: GTCTTTCAAGCCCCCACATCACAGGCTTAGGGACGG...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCACGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPRWSFS*LLKQVW
Trigger: CCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCG...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTAGTAATGGGCAAACTTaGACTGCCCACAGCGATGGA +
Preference number: 4 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPSNGQT*TAHSDG
Trigger: TCCATCGCTGTGGGCAGTGCAAGTTTGCCCATTACT...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGACCCGCATCACGGCCATaGCCAGTTGGGCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRPASRP*PVGHCW
Trigger: CCAACAATGCCCAACTGGGCATGGCCGTGATGCGGG...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGACATTCCAGGATCTGTaGAAGGTTCTGGGGATAGGA +
Preference number: 4 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQTFQDL*KVLGIG
Trigger: TCCTATCCCCAGAACCTTGCACAGATCCTGGAATGT...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACCTTCCTGAGAGGGCTTaGGGTTGTCTTTCACCCCCA +
Preference number: 4 (lower is better)
Translates to: WGSKQGKGSRVHSKGKKDLPERA*GCLSPP
Trigger: TGGGGGTGAAAGACAACCCCAAGCCCTCTCAGGAAG...GTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGCCACCCAACGACATTTaGAGCTCCTTTATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQPPNDI*SSFIGF
Trigger: GAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGG...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTGAGAATGGAGCTTCATaGGGGCCCATGATAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPENGAS*GPMIES
Trigger: AGACTCTATCATGGGCCCCCATGAAGCTCCATTCTC...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGACTTTGCCCTCAGCGGTaGAGACCTCCACGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRLCPQR*RPPRSP
Trigger: TGGAGAACGTGGAGGTCTTCACCGCTGAGGGCAAAG...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR TCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTGTGGTTTCAGGTCTCTaGGTAGAGCCTACGTGGCCC +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYIVVSGL*VEPTWP
Trigger: GGGCCACGTAGGCTCTACTCAGAGACCTGAAACCAC...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp TGGACTTTAAGACCTCAGTTGGTTTGGGCAAGGCCCCCAGCCAGCTCTTTCGACGAAGCCCCCAGGGCATaGCAGAAAAAGAAACTCAAC +
Preference number: 4 (lower is better)
Translates to: WTLRPQLVWARPPASSFDEAPRA*QKKKLN
Trigger: GTTGAGTTTCTTTTTCTGTCATGCCCTGGGGGCTTC...GTCGAAAGAGCTGGCTGGGGGCCTTGCCCAAACCAACTGAGGTCTTAAAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGACCGTCCCTAAGCCTGTaGTGTGGGGGCTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRPSLSL*CGGLKD
Trigger: GTCTTTCAAGCCCCCACATCACAGGCTTAGGGACGG...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR TCA 90 bp CCTGAGAAGGCCAGTGGGGTGACAAATGTCAAGGATCCAGGATGGAGAAGCAATGAACATCCGAGAGGATaGGTGGGGCTGGAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PEKASGVTNVKDPGWRSNEHPRG*VGLELK
Trigger: TTTGAGCTCCAGCCCCACTCATCCTCTCGGATGTTC...ATTGCTTCTCCATCCTGGATCCTTGACATTTGTCACCCCACTGGCCTTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCATCCTTCTGGCAGGTaGGGTCGCAGTAATGGGCAA +
Preference number: 4 (lower is better)
Translates to: LSITSTSSLGVSRETHHLHPSGR*GRSNGQ
Trigger: TTGCCCATTACTGCGACCGCACCTGCCAGAAGGATG...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTTGCTCCACGTGGTTCTaGAAGTCGTCCACGGACACC +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYICSTWF*KSSTDT
Trigger: GGTGTCCGTGGACGACTTGCAGAACCACGTGGAGCA...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp GGACCTGGTGGGATCAATTTACTTCAAGATGTGGGGTACAGCTCTGAGGTCAATGCAAACACTGGCTCCTaGTTCTCCAGGCACTCCCGG +
Preference number: 4 (lower is better)
Translates to: GPGGINLLQDVGYSSEVNANTGS*FSRHSR
Trigger: CCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGTTTGC...ATTGACCTCAGAGCTGTACCCCACATCTTGAAGTAAATTGATCCCACCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp CAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTGGCTCGGCCATGACCTaGATGGGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSRGRDPEYIPKGRRTCIGSAMT*MGWLFR
Trigger: CCTGAACAACCAGCCCATGCAGGTCATGGCCGAGCC...AATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCCCAAGGGCCAATTCTaGAGGGCCCATGATCAACAG +
Preference number: 4 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLPKGQF*RAHDQQ
Trigger: CTGTTGATCATGGGCCCTGCAGAATTGGCCCTTGGG...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGGAGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGACAGCCCAGAACTCCTTaGTGGCCTTCAGACCCCTTC +
Preference number: 4 (lower is better)
Translates to: WRSNNRWSKVWGSKQGKGQPRTP*WPSDPF
Trigger: GAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGGCTG...TCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCACTGCCCACAGCGATaGAGCTTCTCCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYIHCPQR*SFSCLL
Trigger: CAAGAGGCAGGAGAAGCTCCATCGCTGTGGGCAGTG...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGATACCAGCATGCCAGTTaGTCAGCCCTGCCCGCATCA +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRYQHAS*SALPAS
Trigger: TGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTA...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCAGACACCTGCACAGATaGGTGAGCAGCCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSITSTSSLGVSRETHHLRHLHR*VSSHLR
Trigger: TCTCAGGTGGCTGCTCACCCATCTGTGCAGGTGTCT...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGAGAGTTTTCAGCCACTaGGTAGTGCTCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPERVFSH*VVLRGT
Trigger: TGTCCCTCTGAGCACTACCCAGTGGCTGAAAACTCT...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp CTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCGGTGACGTTCTTGGGTaGTGTTCCAAGAAAGAACAG +
Preference number: 4 (lower is better)
Translates to: LNFLIRGLPRDPPPPESLGDVLG*CSKKEQ
Trigger: CTGTTCTTTCTTGGAACACCACCCAAGAACGTCACC...GAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTCCTTCCCATATCTCTTaGTGGCCGAACATTCATTCT +
Preference number: 4 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPPSHIS*WPNIHS
Trigger: AGAATGAATGTTCGGCCATCAAGAGATATGGGAAGG...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGATCCTTCACCACTTCCTaGGAGGGCTTGGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRSFTTS*EGLGLS
Trigger: AGACAACCCCAAGCCCTCTCAGGAAGTGGTGAAGGA...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp CAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QGKGSRVHSKGKKDLHSSRWSFS*LLKQVW
Trigger: CCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCG...ACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp AGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTGTGGGCAAACTTGCACTaGCCACAGCGATGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGRDPEYIPKGRRTCIPVWANLH*PQRWSF
Trigger: GAAGCTCCATCGCTGTGGGCAGTGCAAGTTTGCCCA...CACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCATCCTTCTGGCAGGTaGGGTCGCAGTAATGGGCAA +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYIHPSGR*GRSNGQ
Trigger: TTGCCCATTACTGCGACCGCACCTGCCAGAAGGATG...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACGCAAACACTGGCTCCTaGTTCTCCAGGCACTCCCGG +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDANTGS*FSRHSR
Trigger: CCGGGAGTGCCTGGAGAAGCAGGAGCCAGTGTTTGC...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGTCAATGTTACCAGCATaGCAGTTGGTCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLSMLPA*QLVSPA
Trigger: GGCAGGGCTGACCAACTGGCATGCTGGTAACATTGA...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTGGAAGGACACAGCTCCTaGCCTCCAGGAGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: RGRDPEYIPKGRRTCIPVEGHSS*PPGAHN
Trigger: ATTGTGAGCTCCTGGAGGGCAGGAGCTGTGTCCTTC...CACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATCAGCCCAGAACTCCTTaGTGGCCTTCAGACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SKQGKGSRVHSKGKKDLHQPRTP*WPSDPF
Trigger: GAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGGCTG...ATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp TGGACTTTAAGACCTCAGTTGGTTTGGGCAAGGCCCCCAGCCAGCTCTTTCGACTACATGAATTCGTTCTaGCGGAACATGCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: WTLRPQLVWARPPASSFDYMNSF*RNMRSS
Trigger: GGAGCTACGCATGTTCCGCCAGAACGAATTCATGTA...GTCGAAAGAGCTGGCTGGGGGCCTTGCCCAAACCAACTGAGGTCTTAAAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCAATGACCTGCATGGGCTaGTTGTTCAGGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPMTCMG*LFRAAS
Trigger: CGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCTTGTGGAACAGAGCTaGGGATGGCTCATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPTQRHLELLYWVLGPIILVEQS*GWLIAG
Trigger: CCCAGCAATGAGCCATCCCCAGCTCTGTTCCACAAG...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGAACAAACGTGGGACCTaGTGGGATCAATTTACTTCA +
Preference number: 4 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQNKRGT*WDQFTS
Trigger: TGAAGTAAATTGATCCCACCAGGTCCCACGTTTGTT...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGAAAAGACTACGAATATaGGGAAATGACCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQKRLRI*GNDQGL
Trigger: AAGCCCCTGGTCATTTCCCCATATTCGTAGTCTTTT...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCGGACTTGCATTCCAGTaGTCTGAGAGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSITSTSSLGVSRETHHLGLAFQ*SEREGG
Trigger: TCCTCCTTCCCTCTCAGACCACTGGAATGCAAGTCC...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp TGGAGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGACCCGCTCAGCAAAGATaGTATCTGCAGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: WRSNNRWSKVWGSKQGKGPAQQR*YLQPRT
Trigger: AGTTCTGGGCTGCAGATATCATCTTTGCTGAGCGGG...TCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp CAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTGCTGTCAAAAACCACTaGGGAATAAGCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QGKGSRVHSKGKKDLHSSAVKNH*GISPLS
Trigger: GCTGAGCGGGCTTATTCCGCAGTGGTTTTTGACAGC...ACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACTGCTCCACGTGGTTCTaGAAGTCGTCCACGGACACC +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDCSTWF*KSSTDT
Trigger: GGTGTCCGTGGACGACTTGCAGAACCACGTGGAGCA...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTTGTTTCTCTACATTTTaGTTCCCCACCCAACGACAT +
Preference number: 4 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPCFSTF*FPTQRH
Trigger: ATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACA...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GGACCTGGTGGGATCAATTTACTTCAAGATGTGGGGTACAGCTCTGAGGTCAATCCCAGAACTCCTTGGTaGCCTTCAGACCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GPGGINLLQDVGYSSEVNPRTPW*PSDPFL
Trigger: AAGGAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGG...ATTGACCTCAGAGCTGTACCCCACATCTTGAAGTAAATTGATCCCACCAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATCCCAGAACTCCTTGGTaGCCTTCAGACCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SKQGKGSRVHSKGKKDLHPRTPW*PSDPFL
Trigger: AAGGAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGG...ATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp AGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGGCTGGGCTAGACGTCCACCATCCTCCTaGCATAGAACGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RAYHPIIFVGGVDLGWARRPPSS*HRTRPP
Trigger: AGGAGGCCTCGTTCTATGCCAGGAGGATGGTGGACG...TCTAGCCCAGCCCAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTGGACTTGCATTCCAGTaGTCTGAGAGGGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QGKGSRVHSKGKKDLHSSGLAFQ*SEREGG
Trigger: TCCTCCTTCCCTCTCAGACCACTGGAATGCAAGTCC...ACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAAGATGGAGCAAAGTCTaGGGGTCAAAGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRRWSKV*GSKQGK
Trigger: CTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCT...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCATCCGAGAGGATGAGTaGGGCTGGAGCTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: FPTQRHLELLYWVLGPIIIREDE*GWSSNA
Trigger: TGCATTTGAGCTCCAGCCCCACTCATCCTCTCGGAT...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 72 bp ACCAACCACACAGTATCACATATCCTGCTCAGCCAATaGTGTCTACTGCAGACCACAGGTGAGACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TNHTVSHILLSQ*CLLQTTGETSS
Trigger: GCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACAATTGGCTGAGCAGGATATGTGATACTGTGTGGTTGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 72 bp AAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTaGCATTCCAGTGGTCTGAGAGGGAAGGAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: KGSRVHSKGKKD*HSSGLRGKEEH
Trigger: GTGCTCCTCCTTCCCTCTCAGACCACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
3UTR CAA 72 bp CCAGGAGCTCACAATCTGATGGAGGAGGTGACGTTCTaGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGAHNLMEEVTF*GGVPRKNRSEE
Trigger: CTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTCCTCCATCAGATTGTGAGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp ACTCCAGGAAATGTCAATATGTCAGGGGCAGGGAAAGAAAAAGGACCAGCGAAGCCCGCTCAGCAAAGATaGTATCTGCAGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TPGNVNMSGAGKEKGPAKPAQQR*YLQPRT
Trigger: AGTTCTGGGCTGCAGATATCATCTTTGCTGAGCGGG...CTTCGCTGGTCCTTTTTCTTTCCCTGCCCCTGACATATTGACATTTCCTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCACCTTCCCATATCTCTTaGTGGCCGAACATTCATTCT +
Preference number: 4 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPPSHIS*WPNIHS
Trigger: AGAATGAATGTTCGGCCATCAAGAGATATGGGAAGG...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCAAATTGGCCACACCTCTaGACAGGGTCTAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPNWPHL*TGSNPG
Trigger: ACCTGGGTTAGACCCTGTTCAGAGGTGTGGCCAATT...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp CAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTAGTAATGGGCAAACTTaGACTGCCCACAGCGATGGA +
Preference number: 4 (lower is better)
Translates to: QGKGSRVHSKGKKDLHSSSNGQT*TAHSDG
Trigger: TCCATCGCTGTGGGCAGTGCAAGTTTGCCCATTACT...ACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp AGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCATGTGCGAGATGTACTaGATGCTGAACTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSNNRWSKVWGSKQGKGSMCEMY*MLNCWL
Trigger: GAGCCAGCAGTTCAGCATGCAGTACATCTCGCACAT...GGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp TCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATGGACCTCCGAAACAATaGTCAGCATCCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: SKQGKGSRVHSKGKKDLHGPPKQ*SASAAC
Trigger: ACATGCTGCGGATGCTGAGCATTGTTTCGGAGGTCC...ATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp TGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTCCCCGCATCACGGCCATaGCCAGTTGGGCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: CFKCFSTFCFPTQRHLELPASRP*PVGHCW
Trigger: CCAACAATGCCCAACTGGGCATGGCCGTGATGCGGG...GAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCTTGCAGATCATCCCGTaGCCCACCTCAATGTTACCA +
Preference number: 4 (lower is better)
Translates to: FPTQRHLELLYWVLGPIILQIIP*PTSMLP
Trigger: TGGTAACATTGAGGTGGGGCACGGGATGATCTGCAA...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp TCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATGAATGGCATAGGCTTTaGAGATCATCCCGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SKQGKGSRVHSKGKKDLHEWHRL*RSSRAP
Trigger: TGGGGCACGGGATGATCTGCAAAGCCTATGCCATTC...ATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTGGCTCGGCCATGACCTaGATGGGCTGGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVGSAMT*MGWLFR
Trigger: CCTGAACAACCAGCCCATGCAGGTCATGGCCGAGCC...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGCTCTTGAAGCAGGTGTaGCACACAAAATTAACAAGG +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPELLKQV*HTKLTR
Trigger: CCTTGTTAATTTTGTGTGCCACACCTGCTTCAAGAG...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGGTGTCACCAGGAGAATaGCATAGGCTTTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLVSPGE*HRLCRS
Trigger: TGATCTGCAAAGCCTATGCCATTCTCCTGGTGACAC...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTGGAGTTGATCTGGGCTaGGCTAGAGTTAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: ITSTSSLGVSRETHHLQSGVDLG*ARVNLN
Trigger: ATTCAAGTTAACTCTAGCCCAGCCCAGATCAACTCC...ACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp ATGTACCCATTAGATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGAGACCTCAGTTGGTTTaGGCAAGGCCCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: MYPLDLILVRALLVKEWERPQLV*ARPPAS
Trigger: GCTGGCTGGGGGCCTTGCCCAAACCAACTGAGGTCT...CTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGGAGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGAAGCCAGTTAGATCCCTaGGAGAAAGTTAGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: WRSNNRWSKVWGSKQGKGSQLDP*EKVSAV
Trigger: GACGGCACTAACTTTCTCCCAGGGATCTAACTGGCT...TCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR TCA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTTTGCCCTCAGCGGTaGAGACCTCCACGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLELCPQR*RPPRSP
Trigger: TGGAGAACGTGGAGGTCTTCACCGCTGAGGGCAAAG...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCCTTCCCATATCTCTTaGTGGCCGAACATTCATTCT +
Preference number: 4 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLPSHIS*WPNIHS
Trigger: AGAATGAATGTTCGGCCATCAAGAGATATGGGAAGG...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR TCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGTGCTGGGCTCGGCCATaGCCTGCATGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLCWARP*PAWAGC
Trigger: ACAACCAGCCCATGCAGGTCATGGCCGAGCCCAGCA...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCTCCCAAAACATTGGTaGGAAATTTGGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSITSTSSLGVSRETHHLLPKHW*EIWGLS
Trigger: ACTGAGACCCCAAATTTCTCACCAATGTTTTGGGAG...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp CAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTGGTGACACCCCAAACTaGAGGGATCTTTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: QSRGRDPEYIPKGRRTCIGDTPN*RDLFQD
Trigger: ATCCTGGAAAAGATCCCTTCAGTTTGGGGTGTCACC...AATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACAGAAGGCCAGTGGGGTaGCAAATGTCAAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDRRPVG*QMSRIQ
Trigger: CTGGATCCTTGACATTTGTCACCCCACTGGCCTTCT...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp CAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTCGGGGAATACAGATTTaGGAATCATCAGCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: QGKGSRVHSKGKKDLHSSRGIQI*ESSALR
Trigger: CCTTAGGGCTGATGATTCTCAAATCTGTATTCCCCG...ACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACTGGGGATAGGAAGATaGATAGAAGGACACAGCTCC +
Preference number: 4 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPLGIGR*IEGHSS
Trigger: GGAGCTGTGTCCTTCTATTCATCTTCCTATCCCCAG...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp ACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGTACTGCATGCTGAACTaGTGGCTCTGCGGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TVCFKCFSTFCFPTQRHLYCMLN*WLCGGQ
Trigger: CTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTA...CAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTATCACTCCGAAGATGTaGGAGATGTACTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYIITPKM*EMYCML
Trigger: CAGCATGCAGTACATCTCGCACATCTTCGGAGTGAT...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGGCTGGGCTAGATCAATGTTACCAGCATaGCAGTTGGTCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAYHPIIFVGGVDLGWARSMLPA*QLVSPA
Trigger: GGCAGGGCTGACCAACTGGCATGCTGGTAACATTGA...TCTAGCCCAGCCCAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCAGATACAAGTATTTTaGAAAAGTGTGGCCCATTTG +
Preference number: 4 (lower is better)
Translates to: LNFLIRGLPRDPPPPESLQIQVF*KSVAHL
Trigger: CAAATGGGCCACACTTTTGCAAAATACTTGTATCTG...GAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ATGTACCCATTAGATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGTCCTTAGTGATGGGGTaGGAGGGTCCGTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: MYPLDLILVRALLVKEWESLVMG*EGPCVT
Trigger: GGTGACACACGGACCCTCCCACCCCATCACTAAGGA...CTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACATTTACTTCAAGATGTaGGGTACAGCTCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WGSKQGKGSRVHSKGKKDIYFKM*GTALRS
Trigger: TGACCTCAGAGCTGTACCCCACATCTTGAAGTAAAT...GTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp AGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCCCTAAGCCTGTGATGTaGGGGCTTGAAAGACTATCA +
Preference number: 4 (lower is better)
Translates to: RSNNRWSKVWGSKQGKGSPKPVM*GLERLS
Trigger: TGATAGTCTTTCAAGCCCCCACATCACAGGCTTAGG...GGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp ATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTGTCAAGGATCCAGGATaGAGAAGCAATAATAGATGG +
Preference number: 4 (lower is better)
Translates to: ITSTSSLGVSRETHHLQSVKDPG*RSNNRW
Trigger: CCATCTATTATTGCTTCTCCATCCTGGATCCTTGAC...ACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTGCCTGCAGGCCTCTCTaGTCACTGAGAGTAAAACCG +
Preference number: 4 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVACRPL*SLRVKP
Trigger: CGGTTTTACTCTCAGTGATCAGAGAGGCCTGCAGGC...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGATTCTCATCTGGGTATaGAACATGGATTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLILIWV*NMDFTA
Trigger: GGCAGTGAAATCCATGTTTCATACCCAGATGAGAAT...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp TGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTCTCCTTCACCACTTCCTaGGAGGGCTTGGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: CFKCFSTFCFPTQRHLELSFTTS*EGLGLS
Trigger: AGACAACCCCAAGCCCTCTCAGGAAGTGGTGAAGGA...GAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGATGTGATGTGGGGGCTTaGAAGACTATCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRCDVGA*KTISLL
Trigger: AAGAAGACTGATAGTCTTTCAAGCCCCCACATCACA...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTTGTGATGTGGGGGCTTaGAAGACTATCAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYICDVGA*KTISLL
Trigger: AAGAAGACTGATAGTCTTTCAAGCCCCCACATCACA...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR TCA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCACCAGCGAAGGAACCTaGGAAACTAGATCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: FPTQRHLELLYWVLGPIITSEGT*ETRSED
Trigger: ATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGT...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAAGCAAAGATGATATCTaGAGCCCAGAACTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRSKDDI*SPELLG
Trigger: ACCAAGGAGTTCTGGGCTGCAGATATCATCTTTGCT...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTACCAGGTTGGGGAAGATaGCTACGCCCACGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVPGWGR*LRPRPA
Trigger: TGCAGGCCGTGGGCGTAGGCATCTTCCCCAACCTGG...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACTTGCAGATCATCCCGTaGCCCACCTCAATGTTACCA +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDLQIIP*PTSMLP
Trigger: TGGTAACATTGAGGTGGGGCACGGGATGATCTGCAA...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGGCTGGGCTAGACTGGGCAGTCCTCATTaGTTCTTGTGGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RAYHPIIFVGGVDLGWARLGSPH*FLWNRA
Trigger: AGCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAG...TCTAGCCCAGCCCAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTCCCCAGAACTCCTTGGTaGCCTTCAGACCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CFKCFSTFCFPTQRHLELPRTPW*PSDPFL
Trigger: AAGGAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGG...GAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTCGTCCACCATCCTCCTaGCATAGAACGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: APLLGSRAYHPIIFVGGVRPPSS*HRTRPP
Trigger: AGGAGGCCTCGTTCTATGCCAGGAGGATGGTGGACG...AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTTACCAGCATGCCAGTTaGTCAGCCCTGCCCGCATCA +
Preference number: 4 (lower is better)
Translates to: APLLGSRAYHPIIFVGGVYQHAS*SALPAS
Trigger: TGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTA...AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTATGACCTGCATGGGCTaGTTGTTCAGGGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: APLLGSRAYHPIIFVGGVMTCMG*LFRAAS
Trigger: CGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCAT...AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGAACAGAGCTGGGGATaGCTCATTGCTGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLEQSWG*LIAGLG
Trigger: GCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGTTC...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCGGAGTTGATCTGGGCTaGGCTAGAGTTAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: FPTQRHLELLYWVLGPIIGVDLG*ARVNLN
Trigger: ATTCAAGTTAACTCTAGCCCAGCCCAGATCAACTCC...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCTAAGCCTGTGATGTaGGGGCTTGAAAGACTATCA +
Preference number: 4 (lower is better)
Translates to: QSRGRDPEYIPKGRRTCIPKPVM*GLERLS
Trigger: TGATAGTCTTTCAAGCCCCCACATCACAGGCTTAGG...AATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAATCATCACAGGGAAGTaGGTCACCAAAATCAATGGC +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRIITGK*VTKING
Trigger: GCCATTGATTTTGGTGACCCACTTCCCTGTGATGAT...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGAGATGTACTGCATGCTaGACTGCTGGCTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLRCTAC*TAGSAA
Trigger: CGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCT...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp ATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTAAAAGAGTGATAATTTaGACTAGCCAGTTAGATCCC +
Preference number: 4 (lower is better)
Translates to: ITSTSSLGVSRETHHLQSKRVII*TSQLDP
Trigger: GGGATCTAACTGGCTAGTTCAAATTATCACTCTTTT...ACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp GTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGAAAAGAGTGATAATTTaGACTAGCCAGTTAGATCCC +
Preference number: 4 (lower is better)
Translates to: VWGSKQGKGSRVHSKGKKKRVII*TSQLDP
Trigger: GGGATCTAACTGGCTAGTTCAAATTATCACTCTTTT...CTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR GCA 90 bp ACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGCATCCTTCTGGCAGGTaGGGTCGCAGTAATGGGCAA +
Preference number: 4 (lower is better)
Translates to: TVCFKCFSTFCFPTQRHLHPSGR*GRSNGQ
Trigger: TTGCCCATTACTGCGACCGCACCTGCCAGAAGGATG...CAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGTGCGGCGGCCAGTACTaGAAGAATGTGTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLCGGQY*KNVSTS
Trigger: GGACGTGGACACATTCTTGCAGTACTGGCCGCCGCA...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACTGAACTGCTGGCTCTaGGGCGGCCAGTACTGCAAG +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRLNCWL*GGQYCK
Trigger: CTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAG...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCAGGCAGTGTTCACATGTaGAGTCAAAGTAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPGSVHM*SQSSTA
Trigger: AGCAGTACTACTTTGACTGCACATGTGAACACTGCC...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGAGCTCCATCTCCGTCTaGACCCGCATGGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLSSISV*TRMASK
Trigger: CTTAGAGGCCATGCGGGTGCAGACGGAGATGGAGCT...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGGAGACTCCAGGCACCTaGTACCCTCAACTCAGATGT +
Preference number: 4 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLEETPGT*YPQLRC
Trigger: ACATCTGAGTTGAGGGTAGCAGGTGCCTGGAGTCTC...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGACAGTATCACATATCCTaGTCAGCCAATTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRQYHIS*SANCVY
Trigger: GTAGACACAATTGGCTGAGCAGGATATGTGATACTG...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCTCTTGAAGCAGGTGTaGCACACAAAATTAACAAGG +
Preference number: 4 (lower is better)
Translates to: IDGAKSGGQSRGRDPEYILLKQV*HTKLTR
Trigger: CCTTGTTAATTTTGTGTGCCACACCTGCTTCAAGAG...AATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp TGGAGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGAGAACATTCATTCTTGTaGTTCAGCCAAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: WRSNNRWSKVWGSKQGKGEHSFL*FSQASF
Trigger: GAAGGATGCTTGGCTGAACCACAAGAATGAATGTTC...TCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGATGCATGCTGAACTGCTaGCTCTGCGGCGGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRCMLNC*LCGGQY
Trigger: GTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCA...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGCCAGTTGGGCATTGTTaGGGTGGTAGAGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGPVGHC*GGRASY
Trigger: ATATGAAGCTCTACCACCCCAACAATGCCCAACTGG...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp AGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAAAAGACTACGAATATaGGGAAATGACCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSNNRWSKVWGSKQGKGSKRLRI*GNDQGL
Trigger: AAGCCCCTGGTCATTTCCCCATATTCGTAGTCTTTT...GGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CCA 90 bp ATGTACCCATTAGATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGAGATGGAGCAAAGTCTaGGGGTCAAAGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: MYPLDLILVRALLVKEWERWSKV*GSKQGK
Trigger: CTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCT...CTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGGAAGTCAATCTGCAATaGATTCAAGAAGAAATGCAA +
Preference number: 4 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPEEVNLQ*IQEEMQ
Trigger: TTGCATTTCTTCTTGAATCCATTGCAGATTGACTTC...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 72 bp GGAAAGAGAAAAAGTTTCACTTTGGACATGATGAGTTaGCTGGGCCTGCAGAACATCCGAGAGGATGAGTGG +
Preference number: 4 (lower is better)
Translates to: GKRKSFTLDMMS*LGLQNIREDEW
Trigger: CCACTCATCCTCTCGGATGTTCTGCAGGCCCAGCAAACTCATCATGTCCAAAGTGAAACTTTTTCTCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCAAATTTCACAACCTCATaGTACAAACCCTCGGAACGA +
Preference number: 4 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPNFTTS*YKPSER
Trigger: TCGTTCCGAGGGTTTGTATCATGAGGTTGTGAAATT...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp ACTAGATCAGAAGATCATCACAGGGAAGTGGGTCACCAAAATCAATGGCTGGGAAGCAAAGATGATATCTaGAGCCCAGAACTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TRSEDHHREVGHQNQWLGSKDDI*SPELLG
Trigger: ACCAAGGAGTTCTGGGCTGCAGATATCATCTTTGCT...TCCCAGCCATTGATTTTGGTGACCCACTTCCCTGTGATGATCTTCTGATCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACAGCAAAGATGATATCTaGAGCCCAGAACTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDSKDDI*SPELLG
Trigger: ACCAAGGAGTTCTGGGCTGCAGATATCATCTTTGCT...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AATAGACTTGAATTGAGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NRLELSQNGSGKHRAVNSRWSFS*LLKQVW
Trigger: CCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCG...AGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCTCAATTCAAGTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AATAGACTTGAATTGAGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTTGGGCAAACTTGCACTaGCCACAGCGATGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: NRLELSQNGSGKHRAVNSWANLH*PQRWSF
Trigger: GAAGCTCCATCGCTGTGGGCAGTGCAAGTTTGCCCA...AGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCTCAATTCAAGTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCAAACATGGATTTCACTaGCTCATGATTGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: LSITSTSSLGVSRETHHLKHGFH*LMIAIV
Trigger: AACAATGGCAATCATGAGGCAGTGAAATCCATGTTT...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp AGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGGCTGGGCTAGATACTGCTTCTTCAGCTaGCTCTTGCGTTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: RAYHPIIFVGGVDLGWARYCFFS*LLRSSL
Trigger: TAGTGAAGAACGCAAGAGGCAGCTGAAGAAGCAGTA...TCTAGCCCAGCCCAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACGGCAGTGTTCACATGTaGAGTCAAAGTAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDGSVHM*SQSSTA
Trigger: AGCAGTACTACTTTGACTGCACATGTGAACACTGCC...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACGGACCTCCGAAACAATaGTCAGCATCCGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNGPPKQ*SASAAC
Trigger: ACATGCTGCGGATGCTGAGCATTGTTTCGGAGGTCC...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGCGTTCTGGCGGAACATaGGTAGCTCCATCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLRSGGT*VAPSPS
Trigger: AGACGGAGATGGAGCTACGCATGTTCCGCCAGAACG...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp TGGAGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGAAGCTCTTTCGACATATaGACCATTCTGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: WRSNNRWSKVWGSKQGKGSSFDI*TILKWF
Trigger: AAACCACTTCAGAATGGTGCATATGTCGAAAGAGCT...TCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCGGGCTGGAGCTCAAATaGAAGATCGGGGAATACAGA +
Preference number: 4 (lower is better)
Translates to: CALNVSLHFASPPNDIWSGLELK*KIGEYR
Trigger: TCTGTATTCCCCGATCTTGCATTTGAGCTCCAGCCC...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTACACTGCCCACAGCGATaGAGCTTCTCCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVHCPQR*SFSCLL
Trigger: CAAGAGGCAGGAGAAGCTCCATCGCTGTGGGCAGTG...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCAGAACATTCATTCTTGTaGTTCAGCCAAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPEHSFL*FSQASF
Trigger: GAAGGATGCTTGGCTGAACCACAAGAATGAATGTTC...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGCCAAAGTGCTCCACGTaGTTCTGCAAGTCGTCCACG +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLPKCST*FCKSST
Trigger: CGTGGACGACTTGCAGAACCACGTGGAGCACTTTGG...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGTTGGGCCAACAGTCATaGTTCACCAGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLLGQQS*FTRPRL
Trigger: CAACCTGGGCCTGGTGAACCATGACTGTTGGCCCAA...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGATCCTTAGTGATGGGGTaGGAGGGTCCGTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRSLVMG*EGPCVT
Trigger: GGTGACACACGGACCCTCCCACCCCATCACTAAGGA...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCAGCCAGTTAGATCCCTaGGAGAAAGTTAGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: CALNVSLHFASPPNDIWSSQLDP*EKVSAV
Trigger: GACGGCACTAACTTTCTCCCAGGGATCTAACTGGCT...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 72 bp TGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTaGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATC +
Preference number: 4 (lower is better)
Translates to: CFSTFCFPTQRH*ELLYWVLGPII
Trigger: GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACAATTTCACAACCTCATaGTACAAACCCTCGGAACGA +
Preference number: 4 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDNFTTS*YKPSER
Trigger: TCGTTCCGAGGGTTTGTATCATGAGGTTGTGAAATT...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGAATCTTGGGACTGGTTaGTTCTCAAGACCCTCATTT +
Preference number: 4 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGNLGTG*FSRPSF
Trigger: AAATGAGGGTCTTGAGAATCAACCAGTCCCAAGATT...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGCTGTCAAAAACCACTaGGGAATAAGCCCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLAVKNH*GISPLS
Trigger: GCTGAGCGGGCTTATTCCGCAGTGGTTTTTGACAGC...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTAGTAATGGGCAAACTTaGACTGCCCACAGCGATGGA +
Preference number: 4 (lower is better)
Translates to: APLLGSRAYHPIIFVGGVSNGQT*TAHSDG
Trigger: TCCATCGCTGTGGGCAGTGCAAGTTTGCCCATTACT...AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACATGTGCGAGATGTACTaGATGCTGAACTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNMCEMY*MLNCWL
Trigger: GAGCCAGCAGTTCAGCATGCAGTACATCTCGCACAT...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp GCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTCTGGGCAGTCCTCATTaGTTCTTGTGGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: APLLGSRAYHPIIFVGGVLGSPH*FLWNRA
Trigger: AGCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAG...AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CTAAAATCACAGGGAACCACAAGGCTTGGTAATAAGGGTGATAGAGGGACTTATGTCTGCCTGAGTTCATaGAGAGACTGTGTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: LKSQGTTRLGNKGDRGTYVCLSS*RDCVQN
Trigger: ATTCTGCACACAGTCTCTGCATGAACTCAGGCAGAC...ATAAGTCCCTCTATCACCCTTATTACCAAGCCTTGTGGTTCCCTGTGATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTGTGTCACCAGGAGAATaGCATAGGCTTTGCAGATCA +
Preference number: 4 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVVSPGE*HRLCRS
Trigger: TGATCTGCAAAGCCTATGCCATTCTCCTGGTGACAC...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGGCATCTTGTAGTACATaGATTCGTTCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLEASCST*IRSGGT
Trigger: TGTTCCGCCAGAACGAATTCATGTACTACAAGATGC...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTGCATCTTGTAGTACATaGATTCGTTCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVASCST*IRSGGT
Trigger: TGTTCCGCCAGAACGAATTCATGTACTACAAGATGC...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTATTTACTGATTGCACCTaGGAAGGCCAGTGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVFTDCT*EGQWGD
Trigger: GTCACCCCACTGGCCTTCTCAGGTGCAATCAGTAAA...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACATCACTCCGAAGATGTaGGAGATGTACTGCATGCTG +
Preference number: 4 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNITPKM*EMYCML
Trigger: CAGCATGCAGTACATCTCGCACATCTTCGGAGTGAT...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp CTAAAATCACAGGGAACCACAAGGCTTGGTAATAAGGGTGATAGAGGGACTTATTACTGCTTCTTCAGCTaGCTCTTGCGTTCTTCACTA +
Preference number: 4 (lower is better)
Translates to: LKSQGTTRLGNKGDRGTYYCFFS*LLRSSL
Trigger: TAGTGAAGAACGCAAGAGGCAGCTGAAGAAGCAGTA...ATAAGTCCCTCTATCACCCTTATTACCAAGCCTTGTGGTTCCCTGTGATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGAGAATGGCATAGGCTTTaGAGATCATCCCGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQREWHRL*RSSRAP
Trigger: TGGGGCACGGGATGATCTGCAAAGCCTATGCCATTC...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACCCAGTTGGGCATTGTTaGGGTGGTAGAGCTTCATAT +
Preference number: 4 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNPVGHC*GGRASY
Trigger: ATATGAAGCTCTACCACCCCAACAATGCCCAACTGG...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGAGGATGAGTGGGGCTaGAGCTCAAATGCAAGATCG +
Preference number: 4 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVEDEWG*SSNARS
Trigger: CGATCTTGCATTTGAGCTCCAGCCCCACTCATCCTC...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 72 bp TTGCTTCCCCACCCAACGACATTTGGAGCTCCTTTATaGGGTTCTAGGGCCTATCATCCAATAATATTTGTA +
Preference number: 4 (lower is better)
Translates to: LLPHPTTFGAPL*GSRAYHPIIFV
Trigger: TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR TCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGATTCTGCAGGGCCCATaGTCAACAGGTATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLILQGP*STGMCV
Trigger: AACACACATACCTGTTGATCATGGGCCCTGCAGAAT...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AATAGACTTGAATTGAGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTAAATGTTCTTTCTGGTaGGAAGAGCAGAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: NRLELSQNGSGKHRAVNSKCSFW*EEQKPP
Trigger: TGGGGGCTTCTGCTCTTCTCACCAGAAAGAACATTT...AGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCTCAATTCAAGTCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAGACTGTGTGCAGAATaGCATGAGAATGAATCAAGG +
Preference number: 4 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVRLCAE*HENESR
Trigger: CCTTGATTCATTCTCATGTCATTCTGCACACAGTCT...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCCTCTTGAAGCAGGTGTaGCACACAAAATTAACAAGG +
Preference number: 4 (lower is better)
Translates to: CALNVSLHFASPPNDIWSLLKQV*HTKLTR
Trigger: CCTTGTTAATTTTGTGTGCCACACCTGCTTCAAGAG...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCGAACATTCATTCTTGTaGTTCAGCCAAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: CALNVSLHFASPPNDIWSEHSFL*FSQASF
Trigger: GAAGGATGCTTGGCTGAACCACAAGAATGAATGTTC...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGCCACCCAACGACATTTaGAGCTCCTTTATTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLPPNDI*SSFIGF
Trigger: GAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGG...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACCTTTTAGTGAAGGAGTaGGAGTGGAAGTCAATCTGC +
Preference number: 4 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNLLVKE*EWKSIC
Trigger: GCAGATTGACTTCCACTCCCACTCCTTCACTAAAAG...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp ATCGAAAGGCCAAATCACATAGGAACTAAAATGTACCCATTAGATTTGATCTTGATGTCATACTCTCTGTaGTACCCCCACTGCACACAC +
Preference number: 4 (lower is better)
Translates to: IERPNHIGTKMYPLDLILMSYSL*YPHCTH
Trigger: GTGTGTGCAGTGGGGGTATCACAGAGAGTATGACAT...CAAGATCAAATCTAATGGGTACATTTTAGTTCCTATGTGATTTGGCCTTTCGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp AATAGACTTGAATTGAGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTAAGGTGGTCATTAAATaGAGGGTCTGCCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: NRLELSQNGSGKHRAVNSKVVIK*RVCLSS
Trigger: TGAACTCAGGCAGACCCTTCATTTAATGACCACCTT...AGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCTCAATTCAAGTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR GCA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACTGTTTCTCTACATTTTaGTTCCCCACCCAACGACAT +
Preference number: 4 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNCFSTF*FPTQRH
Trigger: ATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACA...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR GCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGAACACATTCCCTCCTCTaGACCCTCCTCCATATAGTT +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRTHSLL*TLLHIV
Trigger: AACTATATGGAGGAGGGTGCAGAGGAGGGAATGTGT...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGATACATGAATTCGTTCTaGCGGAACATGCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRYMNSF*RNMRSS
Trigger: GGAGCTACGCATGTTCCGCCAGAACGAATTCATGTA...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGAGTGAAGGAGTGGGAGTaGAAGTCAATCTGCAATGGA +
Preference number: 4 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRVKEWE*KSICNG
Trigger: TCCATTGCAGATTGACTTCCACTCCCACTCCTTCAC...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp TGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTCAGAAGAAATGCAAAGTaGAGAAAGGCAGATGATAAC +
Preference number: 4 (lower is better)
Translates to: CFKCFSTFCFPTQRHLELRRNAK*RKADDN
Trigger: GTTATCATCTGCCTTTCTTCACTTTGCATTTCTTCT...GAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGTCTGGGTATGAAACATaGATTTCACTGCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TVCFKCFSTFCFPTQRHLSGYET*ISLPHD
Trigger: ATCATGAGGCAGTGAAATCCATGTTTCATACCCAGA...CAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CCA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTATTGGAGCTCCTTTATTaGGTTCTAGGGCCTATCATC +
Preference number: 4 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVLELLY*VLGPII
Trigger: GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAA...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CCA 90 bp AATAGACTTGAATTGAGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTAAACGTGGGACCTGGTaGGATCAATTTACTTCAAGA +
Preference number: 4 (lower is better)
Translates to: NRLELSQNGSGKHRAVNSKRGTW*DQFTSR
Trigger: TCTTGAAGTAAATTGATCCCACCAGGTCCCACGTTT...AGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCTCAATTCAAGTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
3UTR CAA 72 bp CCAAATCACATAGGAACTAAAATGTACCCATTAGATTaGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PNHIGTKMYPLD*ILVRALLVKEW
Trigger: CCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACATTTTAGTTCCTATGTGATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR TCA 90 bp CAAACAAGACCTAAGTGTCAGATACAAGTATTTTGCAAAAGTGTGGCCCATTTGGATTTCACTGCCTCATaGTTGCCATTGTTAAATATG +
Preference number: 4 (lower is better)
Translates to: QTRPKCQIQVFCKSVAHLDFTAS*LPLLNM
Trigger: CATATTTAACAATGGCAATCATGAGGCAGTGAAATC...CAAATGGGCCACACTTTTGCAAAATACTTGTATCTGACACTTAGGTCTTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS GCA 90 bp GTGTCCACGTCCACCCGCAGGTCCTTCTGCTCCTCCTCCCCAAAGTaGTCCACGTGGTTCTGCAAGTCGTCCACGGACACCAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: VSTSTRRSFCSSSPK*STWFCKSSTDTRQP
Trigger: GGGCTGCCTGGTGTCCGTGGACGACTTGCAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGACCTGCGGGTGGACGTGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS GCA 90 bp CCCGTGCCCCACCTCAATGTTACCAGCATGCCAGTTGGTCAGCCCTaGCCGCATCACGGCCATGCCCAGTTGGGCATTGTTGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: PVPHLNVTSMPVGQP*PHHGHAQLGIVGVV
Trigger: TACCACCCCAACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CCA 90 bp AGCCACATCGCCCCTCCTCCACTGGGCAGTCCTCATTGCTTCTTGTaGAACAGAGCTGGGGATGGCTCATTGCTGGGCTCGGCCATGACC +
Preference number: 5 (lower is better)
Translates to: SHIAPPPLGSPHCFL*NRAGDGSLLGSAMT
Trigger: GGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAGTGGAGGAGGGGCGATGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS TCA 90 bp TCTTGTGGAACAGAGCTGGGGATGGCTCATTGCTGGGCTCGGCCATaGCCTGCATGGGCTGGTTGTTCAGGGCAGCCTCGCGCATCTTGT +
Preference number: 5 (lower is better)
Translates to: SCGTELGMAHCWARP*PAWAGCSGQPRASC
Trigger: ACAAGATGCGCGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGTTCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 90 bp GGCCAGTACTGCAAGAATGTGTCCACGTCCACCCGCAGGTCCTTCTaGTCCTCCTCCCCAAAGTGCTCCACGTGGTTCTGCAAGTCGTCC +
Preference number: 5 (lower is better)
Translates to: GQYCKNVSTSTRRSF*SSSPKCSTWFCKSS
Trigger: GGACGACTTGCAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGACCTGCGGGTGGACGTGGACACATTCTTGCAGTACTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS GCA 90 bp GAGATGTACTGCATGCTGAACTGCTGGCTCTGCGGCGGCCAGTACTaGAAGAATGTGTCCACGTCCACCCGCAGGTCCTTCTGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EMYCMLNCWLCGGQY*KNVSTSTRRSFCSS
Trigger: GGAGGAGCAGAAGGACCTGCGGGTGGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS CCA 90 bp TGCAGATCATCCCGTGCCCCACCTCAATGTTACCAGCATGCCAGTTaGTCAGCCCTGCCCGCATCACGGCCATGCCCAGTTGGGCATTGT +
Preference number: 5 (lower is better)
Translates to: CRSSRAPPQCYQHAS*SALPASRPCPVGHC
Trigger: ACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGATGATCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTTTCACCAGGCCCAGGTaGGGGAAGATGCCTACGCCC +
Preference number: 5 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPFTRPR*GKMPTP
Trigger: GGGCGTAGGCATCTTCCCCAACCTGGGCCTGGTGAA...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 90 bp ACTCCGAAGATGTGCGAGATGTACTGCATGCTGAACTGCTGGCTCTaGGGCGGCCAGTACTGCAAGAATGTGTCCACGTCCACCCGCAGG +
Preference number: 5 (lower is better)
Translates to: TPKMCEMYCMLNCWL*GGQYCKNVSTSTRR
Trigger: CCTGCGGGTGGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS-3UTR CAA 90 bp CTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCTTACCAGCATGCCAGTaGGTCAGCCCTGCCCGCATC +
Preference number: 5 (lower is better)
Translates to: LNFLIRGLPRDPPPPESLLPACQ*VSPARI
Trigger: GATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAA...GAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 90 bp TGGGGTGGGAGGGTCCGTGTGTCACCAGGAGAATGGCATAGGCTTTaGAGATCATCCCGTGCCCCACCTCAATGTTACCAGCATGCCAGT +
Preference number: 5 (lower is better)
Translates to: WGGRVRVSPGEWHRL*RSSRAPPQCYQHAS
Trigger: ACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGATGATCTGCAAAGCCTATGCCATTCTCCTGGTGACACACGGACCCTCCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGAACCTGCATGGGCTGGTaGTTCAGGGCAGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRTCMGW*FRAASR
Trigger: GCGCGAGGCTGCCCTGAACAACCAGCCCATGCAGGT...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAAAGACCTCAGTTGGTTaGGGCAAGGCCCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: KHYLNFLIRGLPRDPPPPKTSVG*GKAPSQ
Trigger: CTGGCTGGGGGCCTTGCCCAAACCAACTGAGGTCTT...TGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS TCA 90 bp GCATGGGCTGGTTGTTCAGGGCAGCCTCGCGCATCTTGTAGTACATaGATTCGTTCTGGCGGAACATGCGTAGCTCCATCTCCGTCTGCA +
Preference number: 5 (lower is better)
Translates to: AWAGCSGQPRASCST*IRSGGTCVAPSPSA
Trigger: TGCAGACGGAGATGGAGCTACGCATGTTCCGCCAGAACGAATTCATGTACTACAAGATGCGCGAGGCTGCCCTGAACAACCAGCCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGGCCGAACATTCATTCTaGTGGTTCAGCCAAGCATCC +
Preference number: 5 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQAEHSF*WFSQAS
Trigger: GGATGCTTGGCTGAACCACAAGAATGAATGTTCGGC...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGATTCACCAGGCCCAGGTaGGGGAAGATGCCTACGCCC +
Preference number: 5 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRFTRPR*GKMPTP
Trigger: GGGCGTAGGCATCTTCCCCAACCTGGGCCTGGTGAA...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCTTACCAGCATGCCAGTaGGTCAGCCCTGCCCGCATC +
Preference number: 5 (lower is better)
Translates to: LSITSTSSLGVSRETHHLLPACQ*VSPARI
Trigger: GATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAA...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 90 bp CAGTTAATCACTCCGAAGATGTGCGAGATGTACTGCATGCTGAACTaGTGGCTCTGCGGCGGCCAGTACTGCAAGAATGTGTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: QLITPKMCEMYCMLN*WLCGGQYCKNVSTS
Trigger: GGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGTGATTAACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS CCA 90 bp TTAATCACTCCGAAGATGTGCGAGATGTACTGCATGCTGAACTGCTaGCTCTGCGGCGGCCAGTACTGCAAGAATGTGTCCACGTCCACC +
Preference number: 5 (lower is better)
Translates to: LITPKMCEMYCMLNC*LCGGQYCKNVSTST
Trigger: GGTGGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGTGATTAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS-3UTR CAA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGTTCTTCAGCTGCCTCTaGCGTTCTTCACTAACGTTG +
Preference number: 5 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQFFSCL*RSSLTL
Trigger: CAACGTTAGTGAAGAACGCAAGAGGCAGCTGAAGAA...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGACACGGCCATGCCCAGTaGGGCATTGTTGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRHGHAQ*GIVGVV
Trigger: TACCACCCCAACAATGCCCAACTGGGCATGGCCGTG...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGACTGGGCAGTCCTCATaGCTTCTTGTGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPETGQSS*LLVEQS
Trigger: GCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAGT...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTCCCACCCAACGACATTaGGAGCTCCTTTATTGGGTT +
Preference number: 5 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPPTQRH*ELLYWV
Trigger: AACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGG...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AGAAGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCTTCAGACCCCTTCCTTaGCCCTCAGCGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: RSNNRWSKVWGSKQGKGSFRPLP*PSAVKT
Trigger: GGTCTTCACCGCTGAGGGCAAAGGAAGGGGTCTGAA...GGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CAA 90 bp TGTGTCTACTGCAGACCACAGGTGAGACCAGCAGCCCCAGAGACACCTGCACAGGGATCTCCCAAAACATaGGTGAGAAATTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: CVYCRPQVRPAAPETPAQGSPKT*VRNLGS
Trigger: AGACCCCAAATTTCTCACCAATGTTTTGGGAGATCC...CTGTGCAGGTGTCTCTGGGGCTGCTGGTCTCACCTGTGGTCTGCAGTAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGCCGAACATTCATTCTaGTGGTTCAGCCAAGCATCC +
Preference number: 5 (lower is better)
Translates to: VWGSKQGKGSRVHSKGKKAEHSF*WFSQAS
Trigger: GGATGCTTGGCTGAACCACAAGAATGAATGTTCGGC...CTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CAA 90 bp TGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTCGCTGGGGATGGCTCATaGCTGGGCTCGGCCATGACC +
Preference number: 5 (lower is better)
Translates to: CFKCFSTFCFPTQRHLELAGDGS*LGSAMT
Trigger: GGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGC...GAGCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCACTGGGCAGTCCTCATaGCTTCTTGTGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: LSITSTSSLGVSRETHHLTGQSS*LLVEQS
Trigger: GCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAGT...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCTATGTTTCTCTACATTTaGCTTCCCCACCCAACGACA +
Preference number: 5 (lower is better)
Translates to: NFLIRGLPRDPPPPESLPMFLYI*LPHPTT
Trigger: TGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACAT...AGGGAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 90 bp GTAAAACCGTTGCAGTTAATCACTCCGAAGATGTGCGAGATGTACTaGATGCTGAACTGCTGGCTCTGCGGCGGCCAGTACTGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: VKPLQLITPKMCEMY*MLNCWLCGGQYCKN
Trigger: ATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGTGATTAACTGCAACGGTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp CATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGACCTTCCCATATCTCTaGATGGCCGAACATTCATTC +
Preference number: 5 (lower is better)
Translates to: HYLNFLIRGLPRDPPPPETFPYL*MAEHSF
Trigger: GAATGAATGTTCGGCCATCAAGAGATATGGGAAGGT...CTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACGCTGGGGATGGCTCATaGCTGGGCTCGGCCATGACC +
Preference number: 5 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNAGDGS*LGSAMT
Trigger: GGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGC...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCGGAGATCGGGATAAATaGGCCACACCTCTGAACAGG +
Preference number: 5 (lower is better)
Translates to: FPTQRHLELLYWVLGPIIGDRDK*ATPLNR
Trigger: CCTGTTCAGAGGTGTGGCCAATTTATCCCGATCTCC...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp ATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTAAAAGTGTGGCCCATTaGCAGAGTTTTCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: ITSTSSLGVSRETHHLQSKSVAH*QSFQPL
Trigger: CAGTGGCTGAAAACTCTGCAAATGGGCCACACTTTT...ACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS CCA 90 bp ATAATGAAAACCATTTCCGTGATGTGCAGGGGAGCGCTGAGCTCCTaGGAAGGAAGTGGATGGGTAAACTCAAGCAGATGTCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: IMKTISVMCRGALSS*EGSGWVNSSRCPQS
Trigger: AGACTGTGGACATCTGCTTGAGTTTACCCATCCACTTCCTTCCCAGGAGCTCAGCGCTCCCCTGCACATCACGGAAATGGTTTTCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468008.1
CDS-3UTR CAA 90 bp GTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGACCTTCCCATATCTCTaGATGGCCGAACATTCATTC +
Preference number: 5 (lower is better)
Translates to: VWGSKQGKGSRVHSKGKKTFPYL*MAEHSF
Trigger: GAATGAATGTTCGGCCATCAAGAGATATGGGAAGGT...CTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCCCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CAA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAAGCCTGATGTTCTCATaGGGCACCTTCCCATATCTC +
Preference number: 5 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRSLMFS*GTFPYL
Trigger: GAGATATGGGAAGGTGCCCAATGAGAACATCAGGCT...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GGGTCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCCCTCGGAACGAGCCTaGTCTATCTTTTCCAATGTA +
Preference number: 5 (lower is better)
Translates to: GSKQGKGSRVHSKGKKDLPSERA*SIFSNV
Trigger: TACATTGGAAAAGATAGACAAGGCTCGTTCCGAGGG...CAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCACGGCCATGCCCAGTaGGGCATTGTTGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLEHGHAQ*GIVGVV
Trigger: TACCACCCCAACAATGCCCAACTGGGCATGGCCGTG...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGAAGTCCTCATTGCTTCTaGTGGAACAGAGCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRSPHCF*WNRAGD
Trigger: ATCCCCAGCTCTGTTCCACAAGAAGCAATGAGGACT...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp CTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCAGAGTCTCTCCCATTAGATTTGATCTaGGTAAGAGCCCTTTTAGTG +
Preference number: 5 (lower is better)
Translates to: LNFLIRGLPRDPPPPESLPLDLI*VRALLV
Trigger: CACTAAAAGGGCTCTTACCAAGATCAAATCTAATGG...GAGAGACTCTGGAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCCTGAGAGTAAAACCGTaGCAGTTAATCACTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LSITSTSSLGVSRETHHLLRVKP*QLITPK
Trigger: CTTCGGAGTGATTAACTGCAACGGTTTTACTCTCAG...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp CCTGAGAAGGCCAGTGGGGTGACAAATGTCAAGGATCCAGGATGGAGAAGCAATAATATGACAGTACAGTaGGGCCAACAGTCATGGTTC +
Preference number: 5 (lower is better)
Translates to: PEKASGVTNVKDPGWRSNNMTVQ*GQQSWF
Trigger: GAACCATGACTGTTGGCCCAACTGTACTGTCATATT...ATTGCTTCTCCATCCTGGATCCTTGACATTTGTCACCCCACTGGCCTTCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGAACCTGCATGGGCTGGTaGTTCAGGGCAGCCTCGCGC +
Preference number: 5 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRTCMGW*FRAASR
Trigger: GCGCGAGGCTGCCCTGAACAACCAGCCCATGCAGGT...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCACCTCTTTGGAGCTCCTTTATaGGGTTCTAGGGCCTATCAT +
Preference number: 5 (lower is better)
Translates to: LSITSTSSLGVSRETHHLFGAPL*GSRAYH
Trigger: ATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAA...GAGGTGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp ACTAGATCAGAAGATCATCACAGGGAAGTGGGTCACCAAAATCAATGGCTGGGAACTTTAAGACCTCAGTaGGTTTGGGCAAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TRSEDHHREVGHQNQWLGTLRPQ*VWARPP
Trigger: TGGGGGCCTTGCCCAAACCAACTGAGGTCTTAAAGT...TCCCAGCCATTGATTTTGGTGACCCACTTCCCTGTGATGATCTTCTGATCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GAGGTGACGTTCTTGGGTGGTGTTCCAAGAAAGAACAGATCAGAGGAGAGGAGAAGGGAACCACAAGGCTaGGTAATAAGGGTGATAGAG +
Preference number: 5 (lower is better)
Translates to: EVTFLGGVPRKNRSEERRREPQG*VIRVIE
Trigger: CTCTATCACCCTTATTACCAAGCCTTGTGGTTCCCT...TCTCCTCTCCTCTGATCTGTTCTTTCTTGGAACACCACCCAAGAACGTCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AGCAATAATAGATGGAGCAAAGTCTGGGGGTCAAAGCAGGGGAAGGGATCCAGAAAAGGGAAGAAGGACTaGCATTCCAGTGGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SNNRWSKVWGSKQGKGSRKGKKD*HSSGLR
Trigger: TCTCAGACCACTGGAATGCAAGTCCTTCTTCCCTTT...TCTGGATCCCTTCCCCTGCTTTGACCCCCAGACTTTGCTCCATCTATTATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000438570.1
CDS-3UTR CAA 90 bp ACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGTTCAGACCCCTTCCTTaGCCCTCAGCGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: TVCFKCFSTFCFPTQRHLFRPLP*PSAVKT
Trigger: GGTCTTCACCGCTGAGGGCAAAGGAAGGGGTCTGAA...CAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTTTCAGACCCCTTCCTTaGCCCTCAGCGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: APLLGSRAYHPIIFVGGVFRPLP*PSAVKT
Trigger: GGTCTTCACCGCTGAGGGCAAAGGAAGGGGTCTGAA...AACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACGCCGAACATTCATTCTaGTGGTTCAGCCAAGCATCC +
Preference number: 5 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDAEHSF*WFSQAS
Trigger: GGATGCTTGGCTGAACCACAAGAATGAATGTTCGGC...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACAGTCCTCATTGCTTCTaGTGGAACAGAGCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDSPHCF*WNRAGD
Trigger: ATCCCCAGCTCTGTTCCACAAGAAGCAATGAGGACT...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCCACCCAACGACATTaGGAGCTCCTTTATTGGGTT +
Preference number: 5 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDPTQRH*ELLYWV
Trigger: AACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGG...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp ACTCCAGGAAATGTCAATATGTCAGGGGCAGGGAAAGAAAAAGGACCAGCGAAGCTGAGAGTAAAACCGTaGCAGTTAATCACTCCGAAG +
Preference number: 5 (lower is better)
Translates to: TPGNVNMSGAGKEKGPAKLRVKP*QLITPK
Trigger: CTTCGGAGTGATTAACTGCAACGGTTTTACTCTCAG...CTTCGCTGGTCCTTTTTCTTTCCCTGCCCCTGACATATTGACATTTCCTGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp TTCCCCACCCAACGACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCTTGAATAGACTTGAATaGAGCCAAAATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: FPTQRHLELLYWVLGPIILNRLE*SQNGSG
Trigger: CCCAGAGCCATTTTGGCTCAATTCAAGTCTATTCAA...GATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGTCGTTGGGTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACCCACCAATGTTTCTCTACATTTaGCTTCCCCACCCAACGACA +
Preference number: 5 (lower is better)
Translates to: NVKHYLNFLIRGLPRDPPMFLYI*LPHPTT
Trigger: TGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACAT...TGGTGGGTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTCCAGTGGATAACAGGCTAATCTaGGGACTGGTTGATTCTCAA +
Preference number: 5 (lower is better)
Translates to: RGRDPEYIPKGRRTCIPVDNRLI*GLVDSQ
Trigger: TTGAGAATCAACCAGTCCCAAGATTAGCCTGTTATC...CACTGGAATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTGAGGAGGTGACGTTCTaGGGTGGTGTTCCAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVEEVTF*GGVPRK
Trigger: CTTTCTTGGAACACCACCCAAGAACGTCACCTCCTC...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AGCAACAATGTTAAGCATTACCTCAACTTCCTCATTAGGGGTCTCCCGAGAGACTCTCCATTCTCCCTATaGTCATCTCAGAGACTGTCA +
Preference number: 5 (lower is better)
Translates to: SNNVKHYLNFLIRGLPRDSPFSL*SSQRLS
Trigger: TGACAGTCTCTGAGATGACAATAGGGAGAATGGAGA...GTCTCTCGGGAGACCCCTAATGAGGAAGTTGAGGTAATGCTTAACATTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGAGCCTGATGTTCTCATaGGGCACCTTCCCATATCTC +
Preference number: 5 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLESLMFS*GTFPYL
Trigger: GAGATATGGGAAGGTGCCCAATGAGAACATCAGGCT...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCATCCTGCTCAGCCAATaGTGTCTACTGCAGACCACA +
Preference number: 5 (lower is better)
Translates to: CALNVSLHFASPPNDIWSILLSQ*CLLQTT
Trigger: TGTGGTCTGCAGTAGACACAATTGGCTGAGCAGGAT...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp ATGTACCCATTAGATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGTTGGACATGATGAGTTaGCTGGGCCTGCAGAACATC +
Preference number: 5 (lower is better)
Translates to: MYPLDLILVRALLVKEWELDMMS*LGLQNI
Trigger: GATGTTCTGCAGGCCCAGCAAACTCATCATGTCCAA...CTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTCCCTCGGAACGAGCCTaGTCTATCTTTTCCAATGTA +
Preference number: 5 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVPSERA*SIFSNV
Trigger: TACATTGGAAAAGATAGACAAGGCTCGTTCCGAGGG...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GAAAAAGGACCAGCGAAGGAACCTGAGAAACTAGATCAGAAGATCATCACAGGGTTGAATAGACTTGAATaGAGCCAAAATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: EKGPAKEPEKLDQKIITGLNRLE*SQNGSG
Trigger: CCCAGAGCCATTTTGGCTCAATTCAAGTCTATTCAA...CCCTGTGATGATCTTCTGATCTAGTTTCTCAGGTTCCTTCGCTGGTCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCGGTTGTGTAGAAGTCTaGGTGACACCCCAAACTGAA +
Preference number: 5 (lower is better)
Translates to: CALNVSLHFASPPNDIWSGCVEV*VTPQTE
Trigger: TTCAGTTTGGGGTGTCACCAAGACTTCTACACAACC...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGAATGGTAGTCCTGGGTaGTGTAGAAGTCTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLENGSPG*CRSLGD
Trigger: GTCACCAAGACTTCTACACAACCCAGGACTACCATT...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp AGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGGGCTGGGCTAGAGCCCGGAGCTCAATTTaGCCATTGTTAAATATGACA +
Preference number: 5 (lower is better)
Translates to: RAYHPIIFVGGVDLGWARARSSI*PLLNMT
Trigger: TGTCATATTTAACAATGGCAAAATTGAGCTCCGGGC...TCTAGCCCAGCCCAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444564.2
CDS-3UTR CAA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACTTCTTCAGCTGCCTCTaGCGTTCTTCACTAACGTTG +
Preference number: 5 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNFFSCL*RSSLTL
Trigger: CAACGTTAGTGAAGAACGCAAGAGGCAGCTGAAGAA...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TCAAAGCAGGGGAAGGGATCCAGAGTACATTCCAAAGGGAAGAAGGACTTGCATTTTTCCAATGTATCCTaGGAGAATTGTATCATCTCC +
Preference number: 5 (lower is better)
Translates to: SKQGKGSRVHSKGKKDLHFSNVS*ENCIIS
Trigger: GGAGATGATACAATTCTCCAAGGATACATTGGAAAA...ATGCAAGTCCTTCTTCCCTTTGGAATGTACTCTGGATCCCTTCCCCTGCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp TGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGCTTTGGAGCTCCTTTATaGGGTTCTAGGGCCTATCAT +
Preference number: 5 (lower is better)
Translates to: CALNVSLHFASPPNDIWSFGAPL*GSRAYH
Trigger: ATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAA...GCTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACAAAGGGAAGAAGGACTaGCATTCCAGTGGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNKGKKD*HSSGLR
Trigger: TCTCAGACCACTGGAATGCAAGTCCTTCTTCCCTTT...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp GGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTAAGCATTACCTCAACACCTTCCCATATCTCTaGATGGCCGAACATTCATTC +
Preference number: 5 (lower is better)
Translates to: GKHRAVNSHSNNVKHYLNTFPYL*MAEHSF
Trigger: GAATGAATGTTCGGCCATCAAGAGATATGGGAAGGT...GTTGAGGTAATGCTTAACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp GTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGACATTTGGAGTGTATCCTTGGAGAATaGTATCATCTCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: VCFKCFSTFCFPTQRHLECILGE*YHLLHH
Trigger: GTGGTGAAGGAGATGATACAATTCTCCAAGGATACA...CTCCAAATGTCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp TTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTAGGAGGAGTTGATCTGAATATGACAGTACAGTaGGGCCAACAGTCATGGTTC +
Preference number: 5 (lower is better)
Translates to: LLGSRAYHPIIFVGGVDLNMTVQ*GQQSWF
Trigger: GAACCATGACTGTTGGCCCAACTGTACTGTCATATT...CAGATCAACTCCTCCTACAAATATTATTGGATGATAGGCCCTAGAACCCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp ATTATTACAGTGTGCTTTAAATGTTTCTCTACATTTTGCTTCCCCACCCAACGATCTCCATTCTCCCTATaGTCATCTCAGAGACTGTCA +
Preference number: 5 (lower is better)
Translates to: IITVCFKCFSTFCFPTQRSPFSL*SSQRLS
Trigger: TGACAGTCTCTGAGATGACAATAGGGAGAATGGAGA...TCGTTGGGTGGGGAAGCAAAATGTAGAGAAACATTTAAAGCACACTGTAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp AGCCAAAATGGCTCTGGGAAACATAGGGCAGTAAATTCTCACAGCAACAATGTTTTTTCCAATGTATCCTaGGAGAATTGTATCATCTCC +
Preference number: 5 (lower is better)
Translates to: SQNGSGKHRAVNSHSNNVFSNVS*ENCIIS
Trigger: GGAGATGATACAATTCTCCAAGGATACATTGGAAAA...AACATTGTTGCTGTGAGAATTTACTGCCCTATGTTTCCCAGAGCCATTTTGGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS-3UTR CAA 90 bp ATGTACCCATTAGATTTGATCTTGGTAAGAGCCCTTTTAGTGAAGGAGTGGGAGTCAGATACAAGTATTTaGCAAAAGTGTGGCCCATTT +
Preference number: 5 (lower is better)
Translates to: MYPLDLILVRALLVKEWESDTSI*QKCGPF
Trigger: AAATGGGCCACACTTTTGCAAAATACTTGTATCTGA...CTCCCACTCCTTCACTAAAAGGGCTCTTACCAAGATCAAATCTAATGGGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419482.7
CDS-3UTR CAA 90 bp ACATTTGGAGCTCCTTTATTGGGTTCTAGGGCCTATCATCCAATAATATTTGTATGTATCCTTGGAGAATaGTATCATCTCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: TFGAPLLGSRAYHPIIFVCILGE*YHLLHH
Trigger: GTGGTGAAGGAGATGATACAATTCTCCAAGGATACA...TACAAATATTATTGGATGATAGGCCCTAGAACCCAATAAAGGAGCTCCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp GCTGGGGATGGCTCATTGCTGGGCTCGGCCATGACCTaGATGGGCTGGTTGTTCAGGGCAGCCTCGCGCATC +
Preference number: 6 (lower is better)
Translates to: AGDGSLLGSAMT*MGWLFRAASRI
Trigger: GATGCGCGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS TCA 72 bp ACAGAGCTGGGGATGGCTCATTGCTGGGCTCGGCCATaGCCTGCATGGGCTGGTTGTTCAGGGCAGCCTCGC +
Preference number: 6 (lower is better)
Translates to: TELGMAHCWARP*PAWAGCSGQPR
Trigger: GCGAGGCTGCCCTGAACAACCAGCCCATGCAGGTCATGGCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CAA 90 bp CCCAGCCACATCGCCCCTCCTCCACTGGGCAGTCCTCATTGCTTCTaGTGGAACAGAGCTGGGGATGGCTCATTGCTGGGCTCGGCCATG +
Preference number: 6 (lower is better)
Translates to: PSHIAPPPLGSPHCF*WNRAGDGSLLGSAM
Trigger: CATGGCCGAGCCCAGCAATGAGCCATCCCCAGCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAGTGGAGGAGGGGCGATGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp TTCTGCTCCTCCTCCCCAAAGTGCTCCACGTGGTTCTaGAAGTCGTCCACGGACACCAGGCAGCCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: FCSSSPKCSTWF*KSSTDTRQPSV
Trigger: CACGGAGGGCTGCCTGGTGTCCGTGGACGACTTGCAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS CCA 72 bp TCCCGTGCCCCACCTCAATGTTACCAGCATGCCAGTTaGTCAGCCCTGCCCGCATCACGGCCATGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: SRAPPQCYQHAS*SALPASRPCPV
Trigger: AACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CAA 72 bp ATCCCGTGCCCCACCTCAATGTTACCAGCATGCCAGTaGGTCAGCCCTGCCCGCATCACGGCCATGCCCAGT +
Preference number: 6 (lower is better)
Translates to: IPCPTSMLPACQ*VSPARITAMPS
Trigger: ACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp TGCATGCTGAACTGCTGGCTCTGCGGCGGCCAGTACTaGAAGAATGTGTCCACGTCCACCCGCAGGTCCTTC +
Preference number: 6 (lower is better)
Translates to: CMLNCWLCGGQY*KNVSTSTRRSF
Trigger: GAAGGACCTGCGGGTGGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS GCA 72 bp AACAGTCATGGTTCACCAGGCCCAGGTTGGGGAAGATaGCTACGCCCACGGCCTGCAGGCCTCTCTGATCAC +
Preference number: 6 (lower is better)
Translates to: NSHGSPGPGWGR*LRPRPAGLSDH
Trigger: GTGATCAGAGAGGCCTGCAGGCCGTGGGCGTAGGCATCTTCCCCAACCTGGGCCTGGTGAACCATGACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp CAGATCATCCCGTGCCCCACCTCAATGTTACCAGCATaGCAGTTGGTCAGCCCTGCCCGCATCACGGCCATG +
Preference number: 6 (lower is better)
Translates to: QIIPCPTSMLPA*QLVSPARITAM
Trigger: CATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGATGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CAA 90 bp TTGCAGATCATCCCGTGCCCCACCTCAATGTTACCAGCATGCCAGTaGGTCAGCCCTGCCCGCATCACGGCCATGCCCAGTTGGGCATTG +
Preference number: 6 (lower is better)
Translates to: LQIIPCPTSMLPACQ*VSPARITAMPSWAL
Trigger: CAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTGGGGCACGGGATGATCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp CCTTCTGGCAGGTGCGGTCGCAGTAATGGGCAAACTTaGACTGCCCACAGCGATGGAGCTTCTCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: PSGRCGRSNGQT*TAHSDGASPAS
Trigger: AGAGGCAGGAGAAGCTCCATCGCTGTGGGCAGTGCAAGTTTGCCCATTACTGCGACCGCACCTGCCAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000419482.7
ENST00000438570.1
ENST00000444564.2
ENST00000468008.1
CDS GCA 72 bp TGCAAGAATGTGTCCACGTCCACCCGCAGGTCCTTCTaGTCCTCCTCCCCAAAGTGCTCCACGTGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: CKNVSTSTRRSF*SSSPKCSTWFC
Trigger: GCAGAACCACGTGGAGCACTTTGGGGAGGAGGAGCAGAAGGACCTGCGGGTGGACGTGGACACATTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS CCA 72 bp CTGCCCGCATCACGGCCATGCCCAGTTGGGCATTGTTaGGGTGGTAGAGCTTCATATAGCCGTCCACCATCC +
Preference number: 6 (lower is better)
Translates to: LPASRPCPVGHC*GGRASYSRPPS
Trigger: GGATGGTGGACGGCTATATGAAGCTCTACCACCCCAACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CAA 72 bp GTTGGTCAGCCCTGCCCGCATCACGGCCATGCCCAGTaGGGCATTGTTGGGGTGGTAGAGCTTCATATAGCC +
Preference number: 6 (lower is better)
Translates to: VGQPCPHHGHAQ*GIVGVVELHIA
Trigger: GGCTATATGAAGCTCTACCACCCCAACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CAA 90 bp AGCATGCCAGTTGGTCAGCCCTGCCCGCATCACGGCCATGCCCAGTaGGGCATTGTTGGGGTGGTAGAGCTTCATATAGCCGTCCACCAT +
Preference number: 6 (lower is better)
Translates to: SMPVGQPCPHHGHAQ*GIVGVVELHIAVHH
Trigger: ATGGTGGACGGCTATATGAAGCTCTACCACCCCAACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp CACCTCAATGTTACCAGCATGCCAGTTGGTCAGCCCTaGCCGCATCACGGCCATGCCCAGTTGGGCATTGTT +
Preference number: 6 (lower is better)
Translates to: HLNVTSMPVGQP*PHHGHAQLGIV
Trigger: AACAATGCCCAACTGGGCATGGCCGTGATGCGGGCAGGGCTGACCAACTGGCATGCTGGTAACATTGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp TCGTTCTGGCGGAACATGCGTAGCTCCATCTCCGTCTaGACCCGCATGGCCTCTAAGTCCTTAGTGATGGGG +
Preference number: 6 (lower is better)
Translates to: SFWRNMRSSISV*TRMASKSLVMG
Trigger: CCCCATCACTAAGGACTTAGAGGCCATGCGGGTGCAGACGGAGATGGAGCTACGCATGTTCCGCCAGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp AGCCACATCGCCCCTCCTCCACTGGGCAGTCCTCATTaGTTCTTGTGGAACAGAGCTGGGGATGGCTCATTG +
Preference number: 6 (lower is better)
Translates to: SHIAPPPLGSPH*FLWNRAGDGSL
Trigger: CAATGAGCCATCCCCAGCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAGTGGAGGAGGGGCGATGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS CAA 72 bp GCCCAGAACTCCTTGGTGGCCTTCAGACCCCTTCCTTaGCCCTCAGCGGTGAAGACCTCCACGTTCTCCATT +
Preference number: 6 (lower is better)
Translates to: AQNSLVAFRPLP*PSAVKTSTFSI
Trigger: AATGGAGAACGTGGAGGTCTTCACCGCTGAGGGCAAAGGAAGGGGTCTGAAGGCCACCAAGGAGTTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000438570.1
ENST00000444564.2
CDS CAA 72 bp CAGCCACATCGCCCCTCCTCCACTGGGCAGTCCTCATaGCTTCTTGTGGAACAGAGCTGGGGATGGCTCATT +
Preference number: 6 (lower is better)
Translates to: QPHRPSSTGQSS*LLVEQSWGWLI
Trigger: AATGAGCCATCCCCAGCTCTGTTCCACAAGAAGCAATGAGGACTGCCCAGTGGAGGAGGGGCGATGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp ATGTGCGAGATGTACTGCATGCTGAACTGCTGGCTCTaGGGCGGCCAGTACTGCAAGAATGTGTCCACGTCC +
Preference number: 6 (lower is better)
Translates to: MCEMYCMLNCWL*GGQYCKNVSTS
Trigger: GGACGTGGACACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS GCA 72 bp CACTGCGGAATAAGCCCGCTCAGCAAAGATGATATCTaGAGCCCAGAACTCCTTGGTGGCCTTCAGACCCCT +
Preference number: 6 (lower is better)
Translates to: HCGISPLSKDDI*SPELLGGLQTP
Trigger: AGGGGTCTGAAGGCCACCAAGGAGTTCTGGGCTGCAGATATCATCTTTGCTGAGCGGGCTTATTCCGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000438570.1
ENST00000444564.2
CDS GCA 72 bp ACTCCGAAGATGTGCGAGATGTACTGCATGCTGAACTaGTGGCTCTGCGGCGGCCAGTACTGCAAGAATGTG +
Preference number: 6 (lower is better)
Translates to: TPKMCEMYCMLN*WLCGGQYCKNV
Trigger: CACATTCTTGCAGTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS GCA 72 bp AGGGTCCGTGTGTCACCAGGAGAATGGCATAGGCTTTaGAGATCATCCCGTGCCCCACCTCAATGTTACCAG +
Preference number: 6 (lower is better)
Translates to: RVRVSPGEWHRL*RSSRAPPQCYQ
Trigger: CTGGTAACATTGAGGTGGGGCACGGGATGATCTGCAAAGCCTATGCCATTCTCCTGGTGACACACGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp TTGCAGTTAATCACTCCGAAGATGTGCGAGATGTACTaGATGCTGAACTGCTGGCTCTGCGGCGGCCAGTAC +
Preference number: 6 (lower is better)
Translates to: LQLITPKMCEMY*MLNCWLCGGQY
Trigger: GTACTGGCCGCCGCAGAGCCAGCAGTTCAGCATGCAGTACATCTCGCACATCTTCGGAGTGATTAACTGCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1
CDS CCA 72 bp ACCATTTCCGTGATGTGCAGGGGAGCGCTGAGCTCCTaGGAAGGAAGTGGATGGGTAAACTCAAGCAGATGT +
Preference number: 6 (lower is better)
Translates to: TISVMCRGALSS*EGSGWVNSSRC
Trigger: ACATCTGCTTGAGTTTACCCATCCACTTCCTTCCCAGGAGCTCAGCGCTCCCCTGCACATCACGGAAATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468008.1
CDS TCA 72 bp GGTTGTTCAGGGCAGCCTCGCGCATCTTGTAGTACATaGATTCGTTCTGGCGGAACATGCGTAGCTCCATCT +
Preference number: 6 (lower is better)
Translates to: GCSGQPRASCST*IRSGGTCVAPS
Trigger: AGATGGAGCTACGCATGTTCCGCCAGAACGAATTCATGTACTACAAGATGCGCGAGGCTGCCCTGAACAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419482.7
ENST00000444564.2
CDS GCA 72 bp GCAAACTTGCACTGCCCACAGCGATGGAGCTTCTCCTaGCTCTTGAAGCAGGTGTGGCACACAAAATTAACA +
Preference number: 6 (lower is better)
Translates to: ANLHCPQRWSFS*LLKQVWHTKLT
Trigger: TGTTAATTTTGTGTGCCACACCTGCTTCAAGAGGCAGGAGAAGCTCCATCGCTGTGGGCAGTGCAAGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419482.7
ENST00000438570.1
ENST00000444564.2
ENST00000468008.1
CDS CAA 72 bp ACCTTCCCATATCTCTTGATGGCCGAACATTCATTCTaGTGGTTCAGCCAAGCATCCTTCTGGCAGGTGCGG +
Preference number: 6 (lower is better)
Translates to: TFPYLLMAEHSF*WFSQASFWQVR
Trigger: CCGCACCTGCCAGAAGGATGCTTGGCTGAACCACAAGAATGAATGTTCGGCCATCAAGAGATATGGGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000419482.7
ENST00000438570.1
ENST00000444564.2
ENST00000468008.1
CDS CAA 72 bp AGCCTGATGTTCTCATTGGGCACCTTCCCATATCTCTaGATGGCCGAACATTCATTCTTGTGGTTCAGCCAA +
Preference number: 6 (lower is better)
Translates to: SLMFSLGTFPYL*MAEHSFLWFSQ
Trigger: TTGGCTGAACCACAAGAATGAATGTTCGGCCATCAAGAGATATGGGAAGGTGCCCAATGAGAACATCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419482.7
ENST00000444564.2
ENST00000468008.1