RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMURF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198742

Ensembl transcript IDs: ENST00000361125.1, ENST00000361368.7, ENST00000472627.1, ENST00000480055.5, ENST00000638461.1, ENST00000638647.1, ENST00000639228.1, ENST00000639855.1

Found 963 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGTCCACCGGGGTCACCTGTGGAGGACCCGGGACCCAGCCCTCTaGCTCTGGGCTGAAGCAACACCCGGCACGAGAGGCAGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: CVHRGHLWRTRDPAL*LWAEATPGTRGRAA
Trigger: TGCTGCCCTGCCTCTCGTGCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTGGACACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp GGGTCACCTGTGGAGGACCCGGGACCCAGCCCTCTGGCTCTGGGCTaGAGCAACACCCGGCACGAGAGGCAGGGCAGCACCAACCAGCAT +
Preference number: 1 (lower is better)
Translates to: GSPVEDPGPSPLALG*SNTRHERQGSTNQH
Trigger: ATGCTGGTTGGTGCTGCCCTGCCTCTCGTGCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGGGTCCCGGGTCCTCCACAGGTGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 90 bp ACCCACACGCAGGTAGAAGTGGAAAAGCAGAGACGGAGGCCAGGATaGGAACGCGTGTGTCCACCGGGGTCACCTGTGGAGGACCCGGGA +
Preference number: 1 (lower is better)
Translates to: THTQVEVEKQRRRPG*ERVCPPGSPVEDPG
Trigger: TCCCGGGTCCTCCACAGGTGACCCCGGTGGACACACGCGTTCCCATCCTGGCCTCCGTCTCTGCTTTTCCACTTCTACCTGCGTGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp GCTGGATCGCCTGGGACCACCGAGAGGGGCAACACAGATCACACGTaGGTGGGCTTCGCGCGGACCCAAAGTAGAACAGTCGGGAAGCTT +
Preference number: 1 (lower is better)
Translates to: AGSPGTTERGNTDHT*VGFARTQSRTVGKL
Trigger: AAGCTTCCCGACTGTTCTACTTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGGTCCCAGGCGATCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 90 bp GATCGCCTGGGACCACCGAGAGGGGCAACACAGATCACACGTGAGTaGGCTTCGCGCGGACCCAAAGTAGAACAGTCGGGAAGCTTTTAC +
Preference number: 1 (lower is better)
Translates to: DRLGPPRGATQITRE*ASRGPKVEQSGSFY
Trigger: GTAAAAGCTTCCCGACTGTTCTACTTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGGTCCCAGGCGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp CCACTGGGGAACGGGCTTCTAGAACACCCTCAGGAAGCATCATGGTaGATGAGACACAGGATGTGCCCACCTGTGGGGGCAAGGCAGAAC +
Preference number: 1 (lower is better)
Translates to: PLGNGLLEHPQEASW*MRHRMCPPVGARQN
Trigger: GTTCTGCCTTGCCCCCACAGGTGGGCACATCCTGTGTCTCATTCACCATGATGCTTCCTGAGGGTGTTCTAGAAGCCCGTTCCCCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp TCTAGGAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTaGACCGGAGCTCTGGAAAGGTCTGCGACACTCACACAACCGATG +
Preference number: 1 (lower is better)
Translates to: SRSAVPPTGRPVWKE*TGALERSATLTQPM
Trigger: CATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR GCA 90 bp CCTTTCCCCTCAGGTGATCTGGAATTCCAGGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCAT +
Preference number: 1 (lower is better)
Translates to: PFPSGDLEFQGLCQL*RRCTEAGCFWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR GCA 90 bp AGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTaGGACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCA +
Preference number: 1 (lower is better)
Translates to: REACLERVNRSSGKV*DTHTTDDKAANPHA
Trigger: TGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 90 bp CCCCCAACAGAAAGGAGAGAGACAACCCTTTCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCCAGCTTTGCAGGAGGTGCACAGAAG +
Preference number: 1 (lower is better)
Translates to: PPTERRETTLSPQVI*NSRASASFAGGAQK
Trigger: CTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGGTTGTCTCTCTCCTTTCTGTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp GGCCATCTCAGACCCACAGCGGGATCCCAGAGACTTCGACAGCAGTaGAATGTCTTGCTCATGAATTACCCTGTACTTGCCCCCACCCCA +
Preference number: 1 (lower is better)
Translates to: GHLRPTAGSQRLRQQ*NVLLMNYPVLAPTP
Trigger: TGGGGTGGGGGCAAGTACAGGGTAATTCATGAGCAAGACATTTCACTGCTGTCGAAGTCTCTGGGATCCCGCTGTGGGTCTGAGATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp GTTCCAAACCCTCAATCAGCCACGCCCAGTCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTCAGGGCTGTGAGCCTTATCACCACA +
Preference number: 1 (lower is better)
Translates to: VPNPQSATPSPLTVS*CSRKELRAVSLITT
Trigger: TGTGGTGATAAGGCTCACAGCCCTGAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGGACTGGGCGTGGCTGATTGAGGGTTTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR GCA 90 bp AGAGACAACCCTTTCCCCTCAGGTGATCTGGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCT +
Preference number: 1 (lower is better)
Translates to: RDNPFPSGDLEFQGL*QLCRRCTEAGCFWS
Trigger: AGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGGTTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp GCTCTTCTATGGACAACAGTGGCACAGAGGTCACAGCTTTGGGACTaGCTGGTTGGCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACA +
Preference number: 1 (lower is better)
Translates to: ALLWTTVAQRSQLWD*LVGSRADFGLLFPT
Trigger: TGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp GATCTGCTACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTAGCAGCTGCTCAAATTGAAAAGGGG +
Preference number: 1 (lower is better)
Translates to: DLLPRTGCWDVKSGI*ALIRYLAAAQIEKG
Trigger: CCCCTTTTCAATTTGAGCAGCTGCTAGATATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAGCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 90 bp TTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTaGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACA +
Preference number: 1 (lower is better)
Translates to: FWNGGLNFPPAANLI*QPFYSRTSAAQKLT
Trigger: TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 90 bp TCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTaGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTT +
Preference number: 1 (lower is better)
Translates to: SQVCVHTLLFVEQYL*VDLHHRGYPFTIAF
Trigger: AAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp AATTCCAATAAGCATACATTATATAGTTATTTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAAT +
Preference number: 1 (lower is better)
Translates to: NSNKHTLYSYFPVGN*SATQNRLLGCEIWN
Trigger: ATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAATAACTATATAATGTATGCTTATTGGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 90 bp CCCAAGTTCAGCTATTGGAAATCAAGCCACTTTAAGATAAAATACTaGCTTTTGTGCAAACTGGAAATGGTGTCAGAAACTTCGAATCTA +
Preference number: 1 (lower is better)
Translates to: PKFSYWKSSHFKIKY*LLCKLEMVSETSNL
Trigger: TAGATTCGAAGTTTCTGACACCATTTCCAGTTTGCACAAAAGTCAGTATTTTATCTTAAAGTGGCTTGATTTCCAATAGCTGAACTTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKHRGHL*RTRDPA
Trigger: GGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGC +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKIRWGL*PHPGGR
Trigger: GCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGAT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCC +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSHRGHL*RTRDPA
Trigger: GGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGC +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGIRWGL*PHPGGR
Trigger: GCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGAT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAATGAGACACAGGATGTaGCCACCTGTGGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKMRHRM*PPVGAR
Trigger: CCTTGCCCCCACAGGTGGGCACATCCTGTGTCTCAT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAACCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGTCACCAGCTGCCACTaGGAAAGGGGCCACATGAGG +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRVTSCH*ERGHMR
Trigger: CCTCATGTGGCCCCTTTCCCAGTGGCAGCTGGTGAC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACCAGCCCTCTGGCTCTaGGCTGAAGCAACACCCGGC +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGPALWL*AEATPG
Trigger: GCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACCTGTTTGGAAAGAGTaGACCGGAGCTCTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKPVWKE*TGALER
Trigger: CCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSPQVI*NSRASA
Trigger: GGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAAGACGGAGGCCAGGATaGGAACGCGTGTGTCCACCG +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGRRRPG*ERVCPP
Trigger: CGGTGGACACACGCGTTCCCATCCTGGCCTCCGTCT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAATGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAAGCTCTGGAAAGGTCTaGGACACTCACACAACCGAT +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKSSGKV*DTHTTD
Trigger: ATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGGATGTGCCCACCTGTaGGGGCAAGGCAGAACTTTT +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRGCAHL*GQGRTF
Trigger: AAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATCC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAATTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAAGTTGGAAATTGATCTaGTACCCAGAACCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKSWKLI*YPEPAA
Trigger: AGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAGTTGGAAATTGATCTaGTACCCAGAACCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKSWKLI*YPEPAA
Trigger: AGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATGGCCTGCTGTTTTCTaGCCAAGTTCAGCTATTGGA +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKWPAVF*PSSAIG
Trigger: TCCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTCACAGCTTTGGGACTaGCTGGTTGGCTCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSQLWD*LVGSRA
Trigger: AGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACCTTGCTTCTGGCCTTaGTCATCATATGAAGACATC +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKPCFWP*SSYEDI
Trigger: GATGTCTTCATATGATGAGCAAGGCCAGAAGCAAGG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGCTAAGCCCACCATTTaGCCTGGACTTTTGGAATGG +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSAKPTI*PGLLEW
Trigger: CCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAACTTTCCTACACTCCATaGCATGGTGTTTTCACTGAA +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKLSYTP*HGVFTE
Trigger: TTCAGTGAAAACACCATGTCATGGAGTGTAGGAAAG...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAAGTCTTTTAAACCATaGGACCCTGGTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKKSFKP*DPGFLP
Trigger: AGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCTACCCAGAACCGGCTaGTGGGATGTGAAATCTGGA +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHLPRTG*WDVKSG
Trigger: TCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGGAGGGATATATGGGTaGGAGCCACCAACAAAAGTC +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTGGIYG*EPPTKV
Trigger: GACTTTTGTTGGTGGCTCCCACCCATATATCCCTCC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGGATGTGCCCACCTGTaGGGGCAAGGCAGAACTTTT +
Preference number: 2 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRGCAHL*GQGRTF
Trigger: AAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATCC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGCTTCAGTTCTCGAATaGATGTCTCTTCCGCCTCCC +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHASVLE*MSLPPP
Trigger: GGGAGGCGGAAGAGACATCCATTCGAGAACTGAAGC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCTTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGAAATGTCTTGCTCATaGATTACCCTGTACTTGCCC +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSEMSCS*ITLYLP
Trigger: GGGCAAGTACAGGGTAATTCATGAGCAAGACATTTC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGAAGTCGTCCCCCTCTaGTGTCACAGGTTTGCGTCC +
Preference number: 2 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFEVVPL*CHRFAS
Trigger: GGACGCAAACCTGTGACAGCAGAGGGGGACGACTTC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCCTTGCTTCTGGCCTTaGTCATCATATGAAGACATC +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRPCFWP*SSYEDI
Trigger: GATGTCTTCATATGATGAGCAAGGCCAGAAGCAAGG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAATTAAACTTTCCTCCTaGAGCAAACCTCATTTGGCA +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKIKLSS*SKPHLA
Trigger: TGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAAT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGGAGGGATATATGGGTaGGAGCCACCAACAAAAGTC +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGGGIYG*EPPTKV
Trigger: GACTTTTGTTGGTGGCTCCCACCCATATATCCCTCC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGCAGCAAACCTCATTTaGCAGCCCTTCTATTCTAGA +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSAANLI*QPFYSR
Trigger: TCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCCTGGACTTTTGGAATaGGGGATTAAACTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRPGLLE*GIKLSS
Trigger: GGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCCTGGACTTTTGGAATaGGGGATTAAACTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: ECSATDREACLERVNRSSPGLLE*GIKLSS
Trigger: GGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGCTAAGCCCACCATTTaGCCTGGACTTTTGGAATGG +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHAKPTI*PGLLEW
Trigger: CCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACAGGGGAAACACATTTTaGCTCAAGCTTCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHRGNTF*LKLPAV
Trigger: CACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAAGGGGAAACACATTTTaGCTCAAGCTTCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGRGNTF*LKLPAV
Trigger: CACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCTTTCCTACACTCCATaGCATGGTGTTTTCACTGAA +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRLSYTP*HGVFTE
Trigger: TTCAGTGAAAACACCATGTCATGGAGTGTAGGAAAG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCTACCCAGAACCGGCTaGTGGGATGTGAAATCTGGA +
Preference number: 2 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTLPRTG*WDVKSG
Trigger: TCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGAGTTGGAAATTGATCTaGTACCCAGAACCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSWKLI*YPEPAA
Trigger: AGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGAAGTCGTCCCCCTCTaGTGTCACAGGTTTGCGTCC +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHEVVPL*CHRFAS
Trigger: GGACGCAAACCTGTGACAGCAGAGGGGGACGACTTC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGAATTACCCTGTACTTaGCCCCACCCCAAACAAAAA +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTELPCT*PHPKQK
Trigger: TTTTTGTTTGGGGTGGGGGCAAGTACAGGGTAATTC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAATTTTACCATTTGCTTTaGCATGTTGAGTTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: PPRGATQITREWASRGPKFYHLL*HVEFFG
Trigger: CCCAAAGAACTCAACATGGCAAAGCAAATGGTAAAA...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCTTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 90 bp TATGGACAACAGTGGCACAGAGGTCACAGCTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATG +
Preference number: 2 (lower is better)
Translates to: YGQQWHRGHSFGTDW*ALGLILVCSFLHSM
Trigger: CATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGTGCCACTGTTGTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 90 bp CATGAGGCAGTGAGTGTGAAGTCGTCCCCCTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: HEAVSVKSSPSAVTG*RPHPTFCRTVSLGG
Trigger: TCCACCCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGAGGGGGACGACTTCACACTCACTGCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAAAGAGCTCAGGGCTGTaGGCCTTATCACCACATGGG +
Preference number: 2 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIKSSGL*ALSPHG
Trigger: CCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTT...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGAGGGGAAACACATTTTaGCTCAAGCTTCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRRGNTF*LKLPAV
Trigger: CACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCT...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCTGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACATAGGAACATTGGCCTaGTGTTTTCTGCCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHIGTLA*CFLPKF
Trigger: GAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTAT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 2 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATCATATGAAGACATCTaGGCAAGTGAACCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGSYEDI*ASEPSS
Trigger: GCTACTCGGTTCACTTGCCCAGATGTCTTCATATGA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACCTGGACTTTTGGAATaGGGGATTAAACTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGPGLLE*GIKLSS
Trigger: GGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTTGGCCTGGACTTTTaGAATGGGGGATTAAACTTT +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRFGLDF*NGGLNF
Trigger: AAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGAAGAGCTCAGGGCTGTaGGCCTTATCACCACATGGG +
Preference number: 2 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWKSSGL*ALSPHG
Trigger: CCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTT...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTA +
Preference number: 2 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRVKSGI*ALIRYL
Trigger: TAGATATCTTATCAGAGCTCAGATTCCAGATTTCAC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAAAGTCTTTTAAACCATaGGACCCTGGTTTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGKSFKP*DPGFLP
Trigger: AGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCCTACCCAGAACCGGCTaGTGGGATGTGAAATCTGGA +
Preference number: 2 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLPRTG*WDVKSG
Trigger: TCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAG...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCTGCTGTCACAGGTTTaGGTCCACACCCTACTTTTT +
Preference number: 2 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLLSQV*VHTLLF
Trigger: AAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 2 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACACCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 2 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTA +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHVKSGI*ALIRYL
Trigger: TAGATATCTTATCAGAGCTCAGATTCCAGATTTCAC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAGACTTCGACAGCAGTaGAATGTCTTGCTCATGAAT +
Preference number: 2 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTRLRQQ*NVLLMN
Trigger: ATTCATGAGCAAGACATTTCACTGCTGTCGAAGTCT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCTATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 2 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 2 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATCTGCTGTCACAGGTTTaGGTCCACACCCTACTTTTT +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHLLSQV*VHTLLF
Trigger: AAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGGAGGGATATATGGGTaGGAGCCACCAACAAAAGTC +
Preference number: 2 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTGGIYG*EPPTKV
Trigger: GACTTTTGTTGGTGGCTCCCACCCATATATCCCTCC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 2 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACAACAGTATCTTTGGGTaGATTTACATCATCGAGGTT +
Preference number: 2 (lower is better)
Translates to: EACLERVNRSSGKVCDTHNSIFG*IYIIEV
Trigger: AACCTCGATGATGTAAATCCACCCAAAGATACTGTT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGTAGAACAGTATCTTTaGGTGGATTTACATCATCGA +
Preference number: 2 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGVEQYL*VDLHHR
Trigger: TCGATGATGTAAATCCACCCAAAGATACTGTTCTAC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 90 bp GCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGCCTGGACTTTaGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTG +
Preference number: 2 (lower is better)
Translates to: AELFKEAKPTIWPGL*EWGIKLSSCSKPHL
Trigger: CAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGCCTCAAGGCTGTTTTaGGATGGAATAGCTGGCATA +
Preference number: 2 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWASRLF*DGIAGI
Trigger: TATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGGCCTCAAGGCTGTTTTaGGATGGAATAGCTGGCATA +
Preference number: 2 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWASRLF*DGIAGI
Trigger: TATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGC...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTA +
Preference number: 2 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRVKSGI*ALIRYL
Trigger: TAGATATCTTATCAGAGCTCAGATTCCAGATTTCAC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTAGGGGAAACACATTTTaGCTCAAGCTTCCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFRGNTF*LKLPAV
Trigger: CACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCT...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCAGCTTTGCAGGAGGTaGACAGAAGCTGGATGCTTT +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFQLCRR*TEAGCF
Trigger: AAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 2 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAAGTTGGAAATTGATCTaGTACCCAGAACCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSSWKLI*YPEPAA
Trigger: AGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACT...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 2 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCATGGCCTGCTGTTTTCTaGCCAAGTTCAGCTATTGGA +
Preference number: 2 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSWPAVF*PSSAIG
Trigger: TCCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCA...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGAATTACCCTGTACTTaGCCCCACCCCAAACAAAAA +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHELPCT*PHPKQK
Trigger: TTTTTGTTTGGGGTGGGGGCAAGTACAGGGTAATTC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGAACAGTATCTTTGGGTaGATTTACATCATCGAGGTT +
Preference number: 2 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRNSIFG*IYIIEV
Trigger: AACCTCGATGATGTAAATCCACCCAAAGATACTGTT...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTCATATGAAGACATCTaGGCAAGTGAACCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHSYEDI*ASEPSS
Trigger: GCTACTCGGTTCACTTGCCCAGATGTCTTCATATGA...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCAGAATATCCTGTGTaGCCAAAGCCAAAGGCTAAA +
Preference number: 2 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAAEYPV*PKPKAK
Trigger: TTTAGCCTTTGGCTTTGGTCACACAGGATATTCTGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAGACTTCGACAGCAGTaGAATGTCTTGCTCATGAAT +
Preference number: 2 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHRLRQQ*NVLLMN
Trigger: ATTCATGAGCAAGACATTTCACTGCTGTCGAAGTCT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATGGCCTGCTGTTTTCTaGCCAAGTTCAGCTATTGGA +
Preference number: 2 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTWPAVF*PSSAIG
Trigger: TCCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPASLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 2 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 2 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCATTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 2 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTA +
Preference number: 2 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFVKSGI*ALIRYL
Trigger: TAGATATCTTATCAGAGCTCAGATTCCAGATTTCAC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 2 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 2 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCATCAAGCTTCCTGCTGTaGCAGAATTCCAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSSSFLL*QNSNKH
Trigger: ATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGA...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGCCTCAAGGCTGTTTTaGGATGGAATAGCTGGCATA +
Preference number: 2 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTASRLF*DGIAGI
Trigger: TATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 90 bp GAAAAGCTGCTCCAATTCCTTCTCCTTTCAAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGTGGCAGAATTCCAATAAGCATACAT +
Preference number: 2 (lower is better)
Translates to: EKLLQFLLLSKGKHI*TQASCCGRIPISIH
Trigger: ATGTATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTTTGAAAGGAGAAGGAATTGGAGCAGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 90 bp GTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTaGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTT +
Preference number: 2 (lower is better)
Translates to: VTGLRPHPTFCRTVS*GGFTSSRLSFHHCF
Trigger: AAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTATAGGAACATTGGCCTaGTGTTTTCTGCCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTIGTLA*CFLPKF
Trigger: GAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTAT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGAACAGTATCTTTGGGTaGATTTACATCATCGAGGTT +
Preference number: 2 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWNSIFG*IYIIEV
Trigger: AACCTCGATGATGTAAATCCACCCAAAGATACTGTT...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGTAGAACAGTATCTTTaGGTGGATTTACATCATCGA +
Preference number: 2 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSVEQYL*VDLHHR
Trigger: TCGATGATGTAAATCCACCCAAAGATACTGTTCTAC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTTTGGCCTGGACTTTTaGAATGGGGGATTAAACTTT +
Preference number: 2 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFFGLDF*NGGLNF
Trigger: AAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGTAGAACAGTATCTTTaGGTGGATTTACATCATCGA +
Preference number: 2 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTVEQYL*VDLHHR
Trigger: TCGATGATGTAAATCCACCCAAAGATACTGTTCTAC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 90 bp TGTGGCAGAATTCCAATAAGCATACATTATATAGTTATTTTCCAGTaGGAAATTGATCTGCTACCCAGAACCGGCTGCTGGGATGTGAAA +
Preference number: 2 (lower is better)
Translates to: CGRIPISIHYIVIFQ*EIDLLPRTGCWDVK
Trigger: TTTCACATCCCAGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAATAACTATATAATGTATGCTTATTGGAATTCTGCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCTCAAGCTTCCTGCTGTaGCAGAATTCCAATAAGCAT +
Preference number: 2 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSSFLL*QNSNKH
Trigger: ATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGA...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp CAGGATGGGAACGCGTGTGTCCACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCCCTCTGGCTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: QDGNACVHRGHL*RTRDPALWLWA
Trigger: AGCCCAGAGCCAGAGGGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTGGACACACGCGTTCCCATCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp CCTGGGACCACCGAGAGGGGCAACACAGATCACACGTaGGTGGGCTTCGCGCGGACCCAAAGTAGAACAGTC +
Preference number: 3 (lower is better)
Translates to: PGTTERGNTDHT*VGFARTQSRTV
Trigger: GACTGTTCTACTTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGGTCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp CAGGTAGAAGTGGAAAAGCAGAGACGGAGGCCAGGATaGGAACGCGTGTGTCCACCGGGGTCACCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: QVEVEKQRRRPG*ERVCPPGSPVE
Trigger: CTCCACAGGTGACCCCGGTGGACACACGCGTTCCCATCCTGGCCTCCGTCTCTGCTTTTCCACTTCTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp GGACCACCGAGAGGGGCAACACAGATCACACGTGAGTaGGCTTCGCGCGGACCCAAAGTAGAACAGTCGGGA +
Preference number: 3 (lower is better)
Translates to: GPPRGATQITRE*ASRGPKVEQSG
Trigger: TCCCGACTGTTCTACTTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: EACLERVNRSSGKVCDTHGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp CCTCAATCAGCCACGCCCAGTCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTCAGGGCTGTGAGCCTT +
Preference number: 3 (lower is better)
Translates to: PQSATPSPLTVS*CSRKELRAVSL
Trigger: AAGGCTCACAGCCCTGAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGGACTGGGCGTGGCTGATTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp TTGGATACCACCACCAGGAAAATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGCTTCAGTTCTCGAATG +
Preference number: 3 (lower is better)
Translates to: LDTTTRKIRWGL*PHPGGRFSSRM
Trigger: CATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGATTTTCCTGGTGGTGGTATCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 3 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 3 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 3 (lower is better)
Translates to: ECSATDREACLERVNRSSFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 3 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGTEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp GAAAGGAGAGAGACAACCCTTTCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCCAGCTTTGCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: ERRETTLSPQVI*NSRASASFAGG
Trigger: ACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGGTTGTCTCTCTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR GCA 72 bp CTCTGCCAGCTTTGCAGGAGGTGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCATGAGCTAGACTCTGTT +
Preference number: 3 (lower is better)
Translates to: LCQLCRRCTEAG*FWSGGHELDSV
Trigger: AACAGAGTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTATCACCACATGGGTaGCAACACAGCAGAATATCC +
Preference number: 3 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRLSPHG*QHSRIS
Trigger: GGATATTCTGCTGTGTTGCAACCCATGTGGTGATAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 3 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 3 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGAACAGATAAAACCATaGTCCACAAGGTCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: ECSATDREACLERVNRSSEQIKP*STRSFP
Trigger: TGGGAAGGACCTTGTGGACAATGGTTTTATCTGTTC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR GCA 72 bp TGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTaGGACACTCACACAACCGATGACAAGGCGGCAAAC +
Preference number: 3 (lower is better)
Translates to: CLERVNRSSGKV*DTHTTDDKAAN
Trigger: GTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 3 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 3 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 3 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHTEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp AGACCCACAGCGGGATCCCAGAGACTTCGACAGCAGTaGAATGTCTTGCTCATGAATTACCCTGTACTTGCC +
Preference number: 3 (lower is better)
Translates to: RPTAGSQRLRQQ*NVLLMNYPVLA
Trigger: GGCAAGTACAGGGTAATTCATGAGCAAGACATTTCACTGCTGTCGAAGTCTCTGGGATCCCGCTGTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp GGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTaGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: GGLNFPPAANLI*QPFYSRTSAAQ
Trigger: CTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 3 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 3 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 3 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPATEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 3 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAATTTGGCCTGGACTTTaGGAATGGGGGATTAAACTT +
Preference number: 3 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGIWPGL*EWGIKL
Trigger: AAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAAT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp CGTAAAGAGCTCAGGGCTGTGAGCCTTATCACCACATaGGTTGCAACACAGCAGAATATCCTGTGTGACCAA +
Preference number: 3 (lower is better)
Translates to: RKELRAVSLITT*VATQQNILCDQ
Trigger: TTGGTCACACAGGATATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp GAGGCTAAGCCCACCATTTGGCCTGGACTTTTGGAATaGGGGATTAAACTTTCCTCCTGCAGCAAACCTCAT +
Preference number: 3 (lower is better)
Translates to: EAKPTIWPGLLE*GIKLSSCSKPH
Trigger: ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 3 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTTEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACA +
Preference number: 3 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWVILSP*LLSEFT
Trigger: TGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAAC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACA +
Preference number: 3 (lower is better)
Translates to: EACLERVNRSSGKVCDTHVILSP*LLSEFT
Trigger: TGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAAC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp CTGGCTGCATTTTATTGGATGGGTGATGGAAGTGGGTaGGAGTACTATGGTAAAGGAGGGATATATGGGTGG +
Preference number: 3 (lower is better)
Translates to: LAAFYWMGDGSG*EYYGKGGIYGW
Trigger: CCACCCATATATCCCTCCTTTACCATAGTACTCCCACCCACTTCCATCACCCATCCAATAAAATGCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGATTTGGCCTGGACTTTaGGAATGGGGGATTAAACTT +
Preference number: 3 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTIWPGL*EWGIKL
Trigger: AAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAAT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp CACCACATGGGTTGCAACACAGCAGAATATCCTGTGTaGCCAAAGCCAAAGGCTAAACCTGGCTGCATTTTA +
Preference number: 3 (lower is better)
Translates to: HHMGCNTAEYPV*PKPKAKPGCIL
Trigger: TAAAATGCAGCCAGGTTTAGCCTTTGGCTTTGGTCACACAGGATATTCTGCTGTGTTGCAACCCATGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp TCTGTAGTTTTCACTTCCTCACCTTCAAGAGGAAGATaGTGCAAGGAAAGGCTGGATACAGCCACTGGGGAA +
Preference number: 3 (lower is better)
Translates to: SVVFTSSPSRGR*CKERLDTATGE
Trigger: TTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGTGAGGAAGTGAAAACTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 3 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CCA 72 bp TGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTaGGTGGATTTACATCATCGAGGTTATCCTTTCACC +
Preference number: 3 (lower is better)
Translates to: CVHTLLFVEQYL*VDLHHRGYPFT
Trigger: GGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR TCA 72 bp AGCTATTGGAAATCAAGCCACTTTAAGATAAAATACTaGCTTTTGTGCAAACTGGAAATGGTGTCAGAAACT +
Preference number: 3 (lower is better)
Translates to: SYWKSSHFKIKY*LLCKLEMVSET
Trigger: AGTTTCTGACACCATTTCCAGTTTGCACAAAAGTCAGTATTTTATCTTAAAGTGGCTTGATTTCCAATAGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGCCCTCACTGGGCAGTaGCAGCGGCTGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKALTGQ*QRLAGL
Trigger: GAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAGGGC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAACCAGAGAGCCCTCACTaGGCAGTGGCAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKPESPH*AVAAAG
Trigger: GCCAGCCGCTGCCACTGCCCAGTGAGGGCTCTCTGG...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAGGACTGGTGGCCGTGTaGTCGGTTCTGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKGLVAV*SVLGRL
Trigger: CAGACGCCCCAGAACCGACCACACGGCCACCAGTCC...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAACCAGCCCTCTGGCTCTaGGCTGAAGCAACACCCGGC +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKPALWL*AEATPG
Trigger: GCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGG...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACCAGCCCTCTGGCTCTaGGCTGAAGCAACACCCGGC +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKPALWL*AEATPG
Trigger: GCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCTTGCTGCGGCGCTCTaGCCCTCGCTGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRLAAAL*PSLLPA
Trigger: GGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCGGGAGATCGGCGCTTaGTGCGGCGCTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRREIGA*CGALTL
Trigger: GAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTIRWGL*PHPGGR
Trigger: GCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGAT...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGAACAGCCGGGGCCCTaGCGCGCCTGTAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSEQPGP*RACRTL
Trigger: CAAGGTTCTACAGGCGCGGCAGGGCCCCGGCTGTTC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGTTCTAGGAGTGCAGTaGCACCGACAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKVLGVQ*HRQGGL
Trigger: CAGGCCTCCCTGTCGGTGGCACTGCACTCCTAGAAC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGACTGGTGGCCGTGTaGTCGGTTCTGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSGLVAV*SVLGRL
Trigger: CAGACGCCCCAGAACCGACCACACGGCCACCAGTCC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGGCAGTTCCGGGGACTaGTGGCCGTGTGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRGSSGD*WPCGRF
Trigger: GAACCGACCACACGGCCACCAGTCCCCGGAACTGCC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCTTGCTGCGGCGCTCTaGCCCTCGCTGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHLAAAL*PSLLPA
Trigger: GGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAGAAGTCGTCCCCCTCTaGTGTCACAGGTTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKEVVPL*CHRFAS
Trigger: GGACGCAAACCTGTGACAGCAGAGGGGGACGACTTC...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCCGGGCGGCAGGCGGATaGTCGAGCCGGGAGATCGGC +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTRAAGG*SSREIG
Trigger: GCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCG...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCCAGAGAGCCCTCACTaGGCAGTGGCAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHPESPH*AVAAAG
Trigger: GCCAGCCGCTGCCACTGCCCAGTGAGGGCTCTCTGG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAAAAGCCTTGAAGCCTTaGAGCGGGACTCGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKKALKP*SGTRVD
Trigger: GTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGGCAGGGGGCATGGCTaGATCGCCTGGGACCACCGA +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHGRGHG*IAWDHR
Trigger: TCGGTGGTCCCAGGCGATCCAGCCATGCCCCCTGCC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACACAGATTCCAGATCTaGGAGCTGGATGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKHRFQI*ELDGLP
Trigger: GGGAAGCCCATCCAGCTCTCAGATCTGGAATCTGTG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACCTATCAGGTGGATGGTaGACAGCCGGGGCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDLSGGW*TAGALP
Trigger: CGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAG...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAAGAGCTCAGGGCTGTaGGCCTTATCACCACATGGG +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKKSSGL*ALSPHG
Trigger: CCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCTGTCGGCCACACAGTaGTTCAGCCGCGTGTTCGAC +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSLSATQ*FSRVFD
Trigger: GTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGTTCTAGGAGTGCAGTaGCACCGACAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRVLGVQ*HRQGGL
Trigger: CAGGCCTCCCTGTCGGTGGCACTGCACTCCTAGAAC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACGGGCGGCAGGCGGATaGTCGAGCCGGGAGATCGGC +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKRAAGG*SSREIG
Trigger: GCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGGACTGGTGGCCGTGTaGTCGGTTCTGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDGLVAV*SVLGRL
Trigger: CAGACGCCCCAGAACCGACCACACGGCCACCAGTCC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGGCAGTTCCGGGGACTaGTGGCCGTGTGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGGSSGD*WPCGRF
Trigger: GAACCGACCACACGGCCACCAGTCCCCGGAACTGCC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGGCAGTTCCGGGGACTaGTGGCCGTGTGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWGSSGD*WPCGRF
Trigger: GAACCGACCACACGGCCACCAGTCCCCGGAACTGCC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACCAGCCTGGCGGCAGTaGTCCAAGTTCATCACAGTT +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKPAWRQ*SKFITV
Trigger: AACTGTGATGAACTTGGACCACTGCCGCCAGGCTGG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAGCGGGACTCGCGTaGACCCAGTCACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSGAGLA*TQSQTA
Trigger: TGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGCGACAGTTCGTGTCTaGGGACTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKATVRV*GLSASG
Trigger: TCCAGAAGCTGAAAGTCCTCAGACACGAACTGTCGC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTIRWGL*PHPGGR
Trigger: GCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGAT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCGCTCTGACCCTCGCTaGTTCCAGCCGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRRSDPR*FQPSPV
Trigger: GACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTGCTGGAGCCGTTCCTaGGTGTCCCGGGGTTCGACA +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWCWSRS*VSRGST
Trigger: TGTCGAACCCCGGGACACGCAGGAACGGCTCCAGCA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATGCTGGAGCCGTTCCTaGGTGTCCCGGGGTTCGACA +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGCWSRS*VSRGST
Trigger: TGTCGAACCCCGGGACACGCAGGAACGGCTCCAGCA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTCGGTTGAGTGGCACTaGCCAGACCCATCCACGACA +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSVEWH*PDPSTT
Trigger: TGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACAGTTCCGGGGACTGGTaGCCGTGTGGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSSGDW*PCGRFW
Trigger: CCAGAACCGACCACACGGCCACCAGTCCCCGGAACT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCCAGAGAGCCCTCACTaGGCAGTGGCAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTPESPH*AVAAAG
Trigger: GCCAGCCGCTGCCACTGCCCAGTGAGGGCTCTCTGG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSSPQVI*NSRASA
Trigger: GGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGTCACCAGCTGCCACTaGGAAAGGGGCCACATGAGG +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTVTSCH*ERGHMR
Trigger: CCTCATGTGGCCCCTTTCCCAGTGGCAGCTGGTGAC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACCAGCACCAACCAGCATaGGGATGGCGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDQHQPA*GWRCSC
Trigger: GCAGCTGCACCGCCATCCCCATGCTGGTTGGTGCTG...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKHRGHL*RTRDPA
Trigger: GGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAGTGAACCGGAGCTCTaGAAAGGTCTGCGACACTCA +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKSEPEL*KGLRHS
Trigger: TGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCTTGCTGCGGCGCTCTaGCCCTCGCTGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLAAAL*PSLLPA
Trigger: GGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTCACAGCTTTGGGACTaGCTGGTTGGCTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSQLWD*LVGSRA
Trigger: AGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGAACACAGATCACACGTaGGTGGGCTTCGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWNTDHT*VGFART
Trigger: GGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCTCGGTTGAGTGGCACTaGCCAGACCCATCCACGACA +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTSVEWH*PDPSTT
Trigger: TGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGA...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTTCTAACAGTCCTCTaGAGTCCACCACCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRFLTVL*SPPPSR
Trigger: GCGGCTCGGTGGTGGACTGCAGAGGACTGTTAGAAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGGTATCCTGGGGTCGTaGCACGTGCTAACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTGILGS*HVLTPV
Trigger: GACTGGAGTTAGCACGTGGCACGACCCCAGGATACC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGTTCTAGGAGTGCAGTaGCACCGACAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGVLGVQ*HRQGGL
Trigger: CAGGCCTCCCTGTCGGTGGCACTGCACTCCTAGAAC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGTTCTAGGAGTGCAGTaGCACCGACAGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWVLGVQ*HRQGGL
Trigger: CAGGCCTCCCTGTCGGTGGCACTGCACTCCTAGAAC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCCGGGCGGCAGGCGGATaGTCGAGCCGGGAGATCGGC +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTRAAGG*SSREIG
Trigger: GCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCG...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGGCAGTGGCAGCGGCTaGCTGGGCTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTGSGSG*LGSLSW
Trigger: CCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGCTCTTATGCAGCTCTaGGTCCACAGATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKALMQL*VHRFQI
Trigger: GATCTGGAATCTGTGGACCCAGAGCTGCATAAGAGC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTCCACGCAGAAGGTGTaGTCCAGTACAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSSTQKV*SSTGVM
Trigger: CATCACGCCTGTACTGGACCACACCTTCTGCGTGGA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGGAGCGGGACTCGCGTaGACCCAGTCACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDGAGLA*TQSQTA
Trigger: TGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCTCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTSPQVI*NSRASA
Trigger: GGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGA...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCCAGCCCTCTGGCTCTaGGCTGAAGCAACACCCGGC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTPALWL*AEATPG
Trigger: GCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCGGGACCCAGCCCTCTaGCTCTGGGCTGAAGCAACA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRRDPAL*LWAEAT
Trigger: TGTTGCTTCAGCCCAGAGCCAGAGGGCTGGGTCCCG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGGCAGGGGGCATGGCTaGATCGCCTGGGACCACCGA +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKGRGHG*IAWDHR
Trigger: TCGGTGGTCCCAGGCGATCCAGCCATGCCCCCTGCC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATCTTGCTGCGGCGCTCTaGCCCTCGCTGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHLAAAL*PSLLPA
Trigger: GGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAG...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGCGACAGTTCGTGTCTaGGGACTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRATVRV*GLSASG
Trigger: TCCAGAAGCTGAAAGTCCTCAGACACGAACTGTCGC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCCAGCTTGGGGCTGCTaGAGCGACAGTTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRPAWGC*SDSSCL
Trigger: CAGACACGAACTGTCGCTTCAGCAGCCCCAAGCTGG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTATCCAGGCCGCCTATaGTCAGCTCCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRYPGRL*SAPVPS
Trigger: AGAAGGAACTGGAGCTGATCATAGGCGGCCTGGATA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCACTCACACAACCGATaGCAAGGCGGCAAACCCACA +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTHSHNR*QGGKPT
Trigger: TGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGAACACAGATCACACGTaGGTGGGCTTCGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRNTDHT*VGFART
Trigger: GGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTT...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATCGGGAGATCGGCGCTTaGTGCGGCGCTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHREIGA*CGALTL
Trigger: GAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCG...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTCGGTTGAGTGGCACTaGCCAGACCCATCCACGACA +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSVEWH*PDPSTT
Trigger: TGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGCAGCAGCAGCACCGGTaGTATCTGTGTAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWQQQHR*YLCKGL
Trigger: CAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTG...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCAGCAGCAGCACCGGTaGTATCTGTGTAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHQQQHR*YLCKGL
Trigger: CAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGGGACTCCACGAACCTaGAATTCCCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGGTPRT*NSLLQQ
Trigger: CTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGGTATCCTGGGGTCGTaGCACGTGCTAACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHGILGS*HVLTPV
Trigger: GACTGGAGTTAGCACGTGGCACGACCCCAGGATACC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGGTTTCAGTTCATGCTaGAGGATCCGCCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDGFSSC*RIRPKA
Trigger: CGCCTTCGGGCGGATCCTGCAGCATGAACTGAAACC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACACCACCGCACGATGTTaGTGTCGGCCACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDTTARC*CRPHSA
Trigger: AGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGACCCAGTCACAAACTaGAGGAGCCTGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDDPVTN*RSLALL
Trigger: AAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGCGCCTGTAGAACCTTaGAAAGCCTTGAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRAPVEP*KALKPW
Trigger: CCAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGAACAGCCGGGGCCCTaGCGCGCCTGTAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKEQPGP*RACRTL
Trigger: CAAGGTTCTACAGGCGCGGCAGGGCCCCGGCTGTTC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGAAGTCGTCCCCCTCTaGTGTCACAGGTTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGEVVPL*CHRFAS
Trigger: GGACGCAAACCTGTGACAGCAGAGGGGGACGACTTC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACACAGTGTCGGTTGAGTaGCACTGCCCAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHTVSVE*HCPDPS
Trigger: GGATGGGTCTGGGCAGTGCCACTCAACCGACACTGT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAGTTCCGGGGACTGGTaGCCGTGTGGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSSGDW*PCGRFW
Trigger: CCAGAACCGACCACACGGCCACCAGTCCCCGGAACT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGGCAGTTCCGGGGACTaGTGGCCGTGTGGTCGGTTC +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKGSSGD*WPCGRF
Trigger: GAACCGACCACACGGCCACCAGTCCCCGGAACTGCC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCCAGCCTGGCGGCAGTaGTCCAAGTTCATCACAGTT +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTPAWRQ*SKFITV
Trigger: AACTGTGATGAACTTGGACCACTGCCGCCAGGCTGG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGGCAGTGGCAGCGGCTaGCTGGGCTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFGSGSG*LGSLSW
Trigger: CCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCCCTCACTGGGCAGTaGCAGCGGCTGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAALTGQ*QRLAGL
Trigger: GAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAGGGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGCCCTCACTGGGCAGTaGCAGCGGCTGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWALTGQ*QRLAGL
Trigger: GAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAGGGC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTAGTAAAGCCACTCCCTaGCCACACCACCGTAATCCA +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSSKATP*PHHRNP
Trigger: TGGATTACGGTGGTGTGGCCAGGGAGTGGCTTTACT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAGCTCCAGTTCCTTCTaGTCAAAAGGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKSSSSF*SKGFSR
Trigger: TCTGCTGAAGCCTTTTGACCAGAAGGAACTGGAGCT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATTCGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGFASIR*MVNSRG
Trigger: GCCCCGGCTGTTCACCATCCACCTGATAGACGCGAA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDSPQVI*NSRASA
Trigger: GGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGCCCACCATTTGGCCTaGACTTTTGGAATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSAHHLA*TFGMGD
Trigger: ATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGCTTCAGTTCTCGAATaGATGTCTCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSASVLE*MSLPPP
Trigger: GGGAGGCGGAAGAGACATCCATTCGAGAACTGAAGC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCCAGCACCAACCAGCATaGGGATGGCGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTQHQPA*GWRCSC
Trigger: GCAGCTGCACCGCCATCCCCATGCTGGTTGGTGCTG...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCACACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSHRGHL*RTRDPA
Trigger: GGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTG...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTCACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFHRGHL*RTRDPA
Trigger: GGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTG...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACAGATCACACGTGAGTaGGCTTCGCGCGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGQITRE*ASRGPK
Trigger: TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRAGWAP*VGTGDS
Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACACAGATTCCAGATCTaGGAGCTGGATGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGHRFQI*ELDGLP
Trigger: GGGAAGCCCATCCAGCTCTCAGATCTGGAATCTGTG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGGTCCAGTACAGGCGTaGTGTCGTTCTCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHGPVQA*CRSLGS
Trigger: GGATCCTAGAGAACGACATCACGCCTGTACTGGACC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACTATCAGGTGGATGGTaGACAGCCGGGGCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKILSGGW*TAGALP
Trigger: CGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTCACAGCTTTGGGACTaGCTGGTTGGCTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSQLWD*LVGSRA
Trigger: AGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCAAGCATCATGGTGAATaGGACACAGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRKHHGE*DTGCAH
Trigger: GTGGGCACATCCTGTGTCTCATTCACCATGATGCTT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTIRWGL*PHPGGR
Trigger: GCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGAT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGATCAGGTGGGGCCTCTaGCCTCATCCCGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWIRWGL*PHPGGR
Trigger: GCGGCCTCCGGGATGAGGTCAGAGGCCCCACCTGAT...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCCTGTTTGGAAAGAGTaGACCGGAGCTCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTPVWKE*TGALER
Trigger: CCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAACACAGATCACACGTaGGTGGGCTTCGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTNTDHT*VGFART
Trigger: GGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATCGCTCTGACCCTCGCTaGTTCCAGCCGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHRSDPR*FQPSPV
Trigger: GACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCG...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACGCTCTGACCCTCGCTaGTTCCAGCCGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIRSDPR*FQPSPV
Trigger: GACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCACGGGAGATCGGCGCTTaGTGCGGCGCTCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSREIGA*CGALTL
Trigger: GAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCG...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAACTGAGGGGTTTAGTTTaGATAGATCCAAACGCTGGT +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKLRGLV*IDPNAG
Trigger: ACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAG...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCTCTGGACACTTCGATaGGGCAATGACCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHLWTLR*GNDQLG
Trigger: CCCAAGCTGGTCATTGCCGCATCGAAGTGTCCAGAG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCTTGGGTTTCAGTTCATaGTGCAGGATCCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTLGFSS*CRIRPK
Trigger: CTTCGGGCGGATCCTGCAGCATGAACTGAAACCCAA...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGACCCAGTCACAAACTaGAGGAGCCTGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRDPVTN*RSLALL
Trigger: AAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGCGCCTGTAGAACCTTaGAAAGCCTTGAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTAPVEP*KALKPW
Trigger: CCAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCTACCCAGAACCGGCTaGTGGGATGTGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTLPRTG*WDVKSG
Trigger: TCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAATAGGAACATTGGCCTaGTGTTTTCTGCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKIGTLA*CFLPKF
Trigger: GAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTAT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTAGCTCTGGAAAGGTCTaGGACACTCACACAACCGAT +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSSSGKV*DTHTTD
Trigger: ATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCCGTGTGGTCGGTTCTaGGGCGTCTGTAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRPCGRF*GVCSEP
Trigger: AGGTTCACTACAGACGCCCCAGAACCGACCACACGG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGCCAGCCTGGCGGCAGTaGTCCAAGTTCATCACAGTT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWPAWRQ*SKFITV
Trigger: AACTGTGATGAACTTGGACCACTGCCGCCAGGCTGG...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGCAGTGGCAGCGGCTaGCTGGGCTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGSGSG*LGSLSW
Trigger: CCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGCCCTCACTGGGCAGTaGCAGCGGCTGGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTALTGQ*QRLAGL
Trigger: GAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAGGGC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATCCACGCAGAAGGTGTaGTCCAGTACAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGSTQKV*SSTGVM
Trigger: CATCACGCCTGTACTGGACCACACCTTCTGCGTGGA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTCCACGCAGAAGGTGTaGTCCAGTACAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSTQKV*SSTGVM
Trigger: CATCACGCCTGTACTGGACCACACCTTCTGCGTGGA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGGAGCGGGACTCGCGTaGACCCAGTCACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTGAGLA*TQSQTA
Trigger: TGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAGGGATATATGGGTaGGAGCCACCAACAAAAGTC +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSGGIYG*EPPTKV
Trigger: GACTTTTGTTGGTGGCTCCCACCCATATATCCCTCC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAATTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGGATGTGCCCACCTGTaGGGGCAAGGCAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWGCAHL*GQGRTF
Trigger: AAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATCC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGGATGTGCCCACCTGTaGGGGCAAGGCAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDGCAHL*GQGRTF
Trigger: AAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATCC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGCTTCAGTTCTCGAATaGATGTCTCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTASVLE*MSLPPP
Trigger: GGGAGGCGGAAGAGACATCCATTCGAGAACTGAAGC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCAGCACCAACCAGCATaGGGATGGCGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFQHQPA*GWRCSC
Trigger: GCAGCTGCACCGCCATCCCCATGCTGGTTGGTGCTG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCACCGGGGTCACCTGTaGAGGACCCGGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFHRGHL*RTRDPA
Trigger: GGCTGGGTCCCGGGTCCTCCACAGGTGACCCCGGTG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCAGATCACACGTGAGTaGGCTTCGCGCGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRQITRE*ASRGPK
Trigger: TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGGCAGGGGGCATGGCTaGATCGCCTGGGACCACCGA +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWGRGHG*IAWDHR
Trigger: TCGGTGGTCCCAGGCGATCCAGCCATGCCCCCTGCC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTAGWAP*VGTGDS
Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGCGACAGTTCGTGTCTaGGGACTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGATVRV*GLSASG
Trigger: TCCAGAAGCTGAAAGTCCTCAGACACGAACTGTCGC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATATCCAGGCCGCCTATaGTCAGCTCCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGYPGRL*SAPVPS
Trigger: AGAAGGAACTGGAGCTGATCATAGGCGGCCTGGATA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCTATCAGGTGGATGGTaGACAGCCGGGGCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWLSGGW*TAGALP
Trigger: CGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAAAGTCTTTTAAACCATaGGACCCTGGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKKSFKP*DPGFLP
Trigger: AGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTT...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACCTGTTTGGAAAGAGTaGACCGGAGCTCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGPVWKE*TGALER
Trigger: CCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGTGACCACCTTAATCTaGATTTGGACCATACGTCCG +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSVTTLI*IWTIRP
Trigger: CGGACGTATGGTCCAAATTCAGATTAAGGTGGTCAC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCGCTCTGACCCTCGCTaGTTCCAGCCGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWRSDPR*FQPSPV
Trigger: GACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTGCTGGAGCCGTTCCTaGGTGTCCCGGGGTTCGACA +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHCWSRS*VSRGST
Trigger: TGTCGAACCCCGGGACACGCAGGAACGGCTCCAGCA...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTATCCACGACAATCTTTaGAAAAGGGTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSIHDNL*KRVREP
Trigger: AGGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGAT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTTTCTAACAGTCCTCTaGAGTCCACCACCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRFLTVL*SPPPSR
Trigger: GCGGCTCGGTGGTGGACTGCAGAGGACTGTTAGAAA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGGTTTCAGTTCATGCTaGAGGATCCGCCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTGFSSC*RIRPKA
Trigger: CGCCTTCGGGCGGATCCTGCAGCATGAACTGAAACC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTCATTGAACCCCTTCTaGAGAGCTAAGAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSLNPF*RAKNWA
Trigger: AGCCCAGTTCTTAGCTCTGCAGAAGGGGTTCAATGA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCTGTCGGCCACACAGTaGTTCAGCCGCGTGTTCGAC +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLSATQ*FSRVFD
Trigger: GTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGCGCCTGTAGAACCTTaGAAAGCCTTGAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHAPVEP*KALKPW
Trigger: CCAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGAACAGCCGGGGCCCTaGCGCGCCTGTAGAACCTTG +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSEQPGP*RACRTL
Trigger: CAAGGTTCTACAGGCGCGGCAGGGCCCCGGCTGTTC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACTACCCAGAACCGGCTaGTGGGATGTGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGLPRTG*WDVKSG
Trigger: TCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGAAGTCGTCCCCCTCTaGTGTCACAGGTTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTEVVPL*CHRFAS
Trigger: GGACGCAAACCTGTGACAGCAGAGGGGGACGACTTC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAGTTCCGGGGACTGGTaGCCGTGTGGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHSSGDW*PCGRFW
Trigger: CCAGAACCGACCACACGGCCACCAGTCCCCGGAACT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGTCCCCGAGGGACTTaGTATCCTGGGGTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGPRGT*YPGVVP
Trigger: TGGCACGACCCCAGGATACCAAGTCCCTCGGGGACC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGGCAGTGGCAGCGGCTaGCTGGGCTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAGSGSG*LGSLSW
Trigger: CCAACTCAAGGAGCCCAGCCAGCCGCTGCCACTGCC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTCTCTTTCGTATCTCTaGGCAGGAAGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSLSYL*AGSSSS
Trigger: GGACGAGGAGCTTCCTGCCCAGAGATACGAAAGAGA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACAGTAAAGCCACTCCCTaGCCACACCACCGTAATCCA +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSKATP*PHHRNP
Trigger: TGGATTACGGTGGTGTGGCCAGGGAGTGGCTTTACT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCAGCTCCAGTTCCTTCTaGTCAAAAGGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRSSSSF*SKGFSR
Trigger: TCTGCTGAAGCCTTTTGACCAGAAGGAACTGGAGCT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGCCCACCATTTGGCCTaGACTTTTGGAATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGAHHLA*TFGMGD
Trigger: ATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGCTTCAGTTCTCGAATaGATGTCTCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWASVLE*MSLPPP
Trigger: GGGAGGCGGAAGAGACATCCATTCGAGAACTGAAGC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAAGACGGAGGCCAGGATaGGAACGCGTGTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIRRRPG*ERVCPP
Trigger: CGGTGGACACACGCGTTCCCATCCTGGCCTCCGTCT...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGGCAGGGGGCATGGCTaGATCGCCTGGGACCACCGA +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTGRGHG*IAWDHR
Trigger: TCGGTGGTCCCAGGCGATCCAGCCATGCCCCCTGCC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFFHSVG*VALPRP
Trigger: GGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGGCACTGGTGATTCATaGTGTGGTGTAACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWGTGDS*CGVTLG
Trigger: ACCCAAGGTTACACCACATCATGAATCACCAGTGCC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGGCTTCAGCAGATGTTaGGGGATGAGCTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWGFSRC*GMSSLN
Trigger: GTTCAATGAGCTCATCCCTCAACATCTGCTGAAGCC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGAAATGTCTTGCTCATaGATTACCCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFREMSCS*ITLYLP
Trigger: GGGCAAGTACAGGGTAATTCATGAGCAAGACATTTC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGAAGCATCATGGTGAATaGGACACAGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWKHHGE*DTGCAH
Trigger: GTGGGCACATCCTGTGTCTCATTCACCATGATGCTT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGAGATCGGCGCTTGCTaGGGCGCTCTGACCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFEIGAC*GALTLA
Trigger: AGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTGCTGGAGCCGTTCCTaGGTGTCCCGGGGTTCGACA +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWCWSRS*VSRGST
Trigger: TGTCGAACCCCGGGACACGCAGGAACGGCTCCAGCA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTCGGTTGAGTGGCACTaGCCAGACCCATCCACGACA +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFSVEWH*PDPSTT
Trigger: TGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCTGAGGGGTTTAGTTTaGATAGATCCAAACGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRLRGLV*IDPNAG
Trigger: ACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACAGCAGCAGCACCGGTaGTATCTGTGTAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKQQQHR*YLCKGL
Trigger: CAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCTCTGGACACTTCGATaGGGCAATGACCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTLWTLR*GNDQLG
Trigger: CCCAAGCTGGTCATTGCCGCATCGAAGTGTCCAGAG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGACCCAGTCACAAACTaGAGGAGCCTGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKDPVTN*RSLALL
Trigger: AAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACCAGCTTTGCAGGAGGTaGACAGAAGCTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDQLCRR*TEAGCF
Trigger: AAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTG...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCTACCCAGAACCGGCTaGTGGGATGTGAAATCTGGA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRLPRTG*WDVKSG
Trigger: TCCAGATTTCACATCCCAGCAGCCGGTTCTGGGTAG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCAGTTGGAAATTGATCTaGTACCCAGAACCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTSWKLI*YPEPAA
Trigger: AGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACT...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGAGCTCTGGAAAGGTCTaGGACACTCACACAACCGAT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSSGKV*DTHTTD
Trigger: ATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCGGGCGGCAGGCGGATaGTCGAGCCGGGAGATCGGC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSRAAGG*SSREIG
Trigger: GCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAACAGTGTCGGTTGAGTaGCACTGCCCAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKTVSVE*HCPDPS
Trigger: GGATGGGTCTGGGCAGTGCCACTCAACCGACACTGT...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACATCTGTGTAAGGGGCTaGTTCCTCCATGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHICVRG*FLHEAA
Trigger: AGCTGCTTCATGGAGGAACCAGCCCCTTACACAGAT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGAGTTCCGGGGACTGGTaGCCGTGTGGTCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWSSGDW*PCGRFW
Trigger: CCAGAACCGACCACACGGCCACCAGTCCCCGGAACT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGCTCTTATGCAGCTCTaGGTCCACAGATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGALMQL*VHRFQI
Trigger: GATCTGGAATCTGTGGACCCAGAGCTGCATAAGAGC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGAGCGGGACTCGCGTaGACCCAGTCACAAACTGCA +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGAGLA*TQSQTA
Trigger: TGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGCGGTTAAAGCAGGTATaGGCCTTCGGAAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWRLKQV*AFGRLS
Trigger: AGACAACCTTCCGAAGGCCCATACCTGCTTTAACCG...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCCAGCCCTCTGGCTCTaGGCTGAAGCAACACCCGGC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFPALWL*AEATPG
Trigger: GCCGGGTGTTGCTTCAGCCCAGAGCCAGAGGGCTGG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCGGGACCCAGCCCTCTaGCTCTGGGCTGAAGCAACA +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWRDPAL*LWAEAT
Trigger: TGTTGCTTCAGCCCAGAGCCAGAGGGCTGGGTCCCG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCACGGGACCCAGCCCTCTaGCTCTGGGCTGAAGCAACA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPARDPAL*LWAEAT
Trigger: TGTTGCTTCAGCCCAGAGCCAGAGGGCTGGGTCCCG...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAGACGGAGGCCAGGATaGGAACGCGTGTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTRRRPG*ERVCPP
Trigger: CGGTGGACACACGCGTTCCCATCCTGGCCTCCGTCT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 72 bp CAGTGGCACAGAGGTCACAGCTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTA +
Preference number: 4 (lower is better)
Translates to: QWHRGHSFGTDW*ALGLILVCSFL
Trigger: TAGGAAAGAGCAGACCAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGTGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACTGTCAGACGGATCTTaGTGCTGGAGCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKILSDGS*CWSRSC
Trigger: GCAGGAACGGCTCCAGCATCAAGATCCGTCTGACAG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTCCAGCTTGGGGCTGCTaGAGCGACAGTTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFPAWGC*SDSSCL
Trigger: CAGACACGAACTGTCGCTTCAGCAGCCCCAAGCTGG...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGGCTTCAGCAGATGTTaGGGGATGAGCTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRGFSRC*GMSSLN
Trigger: GTTCAATGAGCTCATCCCTCAACATCTGCTGAAGCC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGCCTCAAGGCTGTTTTaGGATGGAATAGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDASRLF*DGIAGI
Trigger: TATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAGCAGCTGCTCAAATTaGAAAGGGGCCTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSSCSN*KGASRL
Trigger: CAGCCTTGAGGCCCCTTTTCAATTTGAGCAGCTGCT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTA +
Preference number: 4 (lower is better)
Translates to: PPRGATQITREWASRGPKVKSGI*ALIRYL
Trigger: TAGATATCTTATCAGAGCTCAGATTCCAGATTTCAC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCAGACTTCGACAGCAGTaGAATGTCTTGCTCATGAAT +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRRLRQQ*NVLLMN
Trigger: ATTCATGAGCAAGACATTTCACTGCTGTCGAAGTCT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACACTCACACAACCGATaGCAAGGCGGCAAACCCACA +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKHSHNR*QGGKPT
Trigger: TGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTCTCTTTTCAGAACTTaGGAGAGCCCTTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSLFRT*ESPFPV
Trigger: GACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACATCCACGACAATCTTTaGAAAAGGGTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDIHDNL*KRVREP
Trigger: AGGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGAT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAGGTATCCTGGGGTCGTaGCACGTGCTAACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIGILGS*HVLTPV
Trigger: GACTGGAGTTAGCACGTGGCACGACCCCAGGATACC...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGTATCCTGGGGTCGTaGCACGTGCTAACTCCAGTC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGILGS*HVLTPV
Trigger: GACTGGAGTTAGCACGTGGCACGACCCCAGGATACC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACTCTGGACACTTCGATaGGGCAATGACCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKLWTLR*GNDQLG
Trigger: CCCAAGCTGGTCATTGCCGCATCGAAGTGTCCAGAG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCACTGTCGGCCACACAGTaGTTCAGCCGCGTGTTCGAC +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPALSATQ*FSRVFD
Trigger: GTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAG...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATACCACCGCACGATGTTaGTGTCGGCCACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHTTARC*CRPHSA
Trigger: AGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAACGTCTCCACCGCTTaGCAGAACCACCGCACGATG +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHNVSTA*QNHRTM
Trigger: CATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAGGCCTCTGCCAGCTTTaGAGGAGGTGCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIGLCQL*RRCTEA
Trigger: AGCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCC...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 4 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTGGCCTGCTGTTTTCTaGCCAAGTTCAGCTATTGGA +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWWPAVF*PSSAIG
Trigger: TCCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCAAACTGACCACTATCTaGCCACGAACTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTKLTTI*PRTASV
Trigger: TACTGATGCAGTTCGTGGCCAGATAGTGGTCAGTTT...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGATCTGTGTAAGGGGCTaGTTCCTCCATGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRICVRG*FLHEAA
Trigger: AGCTGCTTCATGGAGGAACCAGCCCCTTACACAGAT...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCCAGAGAGCCCTCACTaGGCAGTGGCAGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTPESPH*AVAAAG
Trigger: GCCAGCCGCTGCCACTGCCCAGTGAGGGCTCTCTGG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTCTCTTTCGTATCTCTaGGCAGGAAGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSLSYL*AGSSSS
Trigger: GGACGAGGAGCTTCCTGCCCAGAGATACGAAAGAGA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCAAAGATTTCTTCTCTaGACACTTCGATGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSQRFLL*TLRCGN
Trigger: ATTGCCGCATCGAAGTGTCCAGAGAAGAAATCTTTG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAAAAGCCTTGAAGCCTTaGAGCGGGACTCGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIKALKP*SGTRVD
Trigger: GTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTT...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCAGACTCTGTTGCCTTTaGTTGCTTTTCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTRLCCL*LLFTPQ
Trigger: CTGTGGAGTGAAAAGCAACCAAAGGCAACAGAGTCT...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAACAGTATCTTTGGGTaGATTTACATCATCGAGGTT +
Preference number: 4 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKNSIFG*IYIIEV
Trigger: AACCTCGATGATGTAAATCCACCCAAAGATACTGTT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGCTCGTGATAGAGAGTaGGCTGTCCGGGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTARDRE*AVRGRS
Trigger: AGACCTCCCCCGGACAGCCCACTCTCTATCACGAGC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGCTTCAGTTCTCGAATaGATGTCTCTTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTASVLE*MSLPPP
Trigger: GGGAGGCGGAAGAGACATCCATTCGAGAACTGAAGC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACACGGGACCCAGCCCTCTaGCTCTGGGCTGAAGCAACA +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTRDPAL*LWAEAT
Trigger: TGTTGCTTCAGCCCAGAGCCAGAGGGCTGGGTCCCG...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATTGAGTTGGCACTGGTaGTTCATGATGTGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGLSWHW*FMMWCN
Trigger: GTTACACCACATCATGAATCACCAGTGCCAACTCAA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTTGAGTTGGCACTGGTaGTTCATGATGTGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHLSWHW*FMMWCN
Trigger: GTTACACCACATCATGAATCACCAGTGCCAACTCAA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACACCAGCTTGGGGCTGCTaGAGCGACAGTTCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTPAWGC*SDSSCL
Trigger: CAGACACGAACTGTCGCTTCAGCAGCCCCAAGCTGG...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGTGGTCGGGGTTGATTaGAGAATCCGGATTTATTTG +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGVVGVD*RIRIYL
Trigger: CAAATAAATCCGGATTCTTCAATCAACCCCGACCAC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGACAAGTGGTCGGGGTTaGTTGAAGAATCCGGATTTA +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWTSGRG*LKNPDL
Trigger: TAAATCCGGATTCTTCAATCAACCCCGACCACTTGT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACACAGATTCCAGATCTaGGAGCTGGATGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIHRFQI*ELDGLP
Trigger: GGGAAGCCCATCCAGCTCTCAGATCTGGAATCTGTG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGGCTTCAGCAGATGTTaGGGGATGAGCTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTGFSRC*GMSSLN
Trigger: GTTCAATGAGCTCATCCCTCAACATCTGCTGAAGCC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGCAGAATATCCTGTGTaGCCAAAGCCAAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHAEYPV*PKPKAK
Trigger: TTTAGCCTTTGGCTTTGGTCACACAGGATATTCTGC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACCCCTAACTGTGAGTTaGTGCTCCCGTAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKPLTVS*CSRKEL
Trigger: GAGCTCTTTACGGGAGCATCAACTCACAGTTAGGGG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATCCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAAGCATCATGGTGAATaGGACACAGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTKHHGE*DTGCAH
Trigger: GTGGGCACATCCTGTGTCTCATTCACCATGATGCTT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTTCCTTCCTAGTTACTaGAGATTTTGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSFLPSY*RFWIPP
Trigger: TGGTGGTATCCAAAATCTTCAGTAACTAGGAAGGAA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTCTCTTTTCAGAACTTaGGAGAGCCCTTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRSLFRT*ESPFPV
Trigger: GACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTTCTAACAGTCCTCTaGAGTCCACCACCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHFLTVL*SPPPSR
Trigger: GCGGCTCGGTGGTGGACTGCAGAGGACTGTTAGAAA...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGGGACTCCACGAACCTaGAATTCCCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFGTPRT*NSLLQQ
Trigger: CTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGGTTTCAGTTCATGCTaGAGGATCCGCCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTGFSSC*RIRPKA
Trigger: CGCCTTCGGGCGGATCCTGCAGCATGAACTGAAACC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGAACGTCTCCACCGCTTaGCAGAACCACCGCACGATG +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWNVSTA*QNHRTM
Trigger: CATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAACGTCTCCACCGCTTaGCAGAACCACCGCACGATG +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTNVSTA*QNHRTM
Trigger: CATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGACCCAGTCACAAACTaGAGGAGCCTGGCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWDPVTN*RSLALL
Trigger: AAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCAGCTTTGCAGGAGGTaGACAGAAGCTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTQLCRR*TEAGCF
Trigger: AAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGAAGTCGTCCCCCTCTaGTGTCACAGGTTTGCGTCC +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSEVVPL*CHRFAS
Trigger: GGACGCAAACCTGTGACAGCAGAGGGGGACGACTTC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACCCTTGCTTCTGGCCTTaGTCATCATATGAAGACATC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDPCFWP*SSYEDI
Trigger: GATGTCTTCATATGATGAGCAAGGCCAGAAGCAAGG...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGATGAGACACAGGATGTaGCCACCTGTGGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWMRHRM*PPVGAR
Trigger: CCTTGCCCCCACAGGTGGGCACATCCTGTGTCTCAT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCACAGTGTCGGTTGAGTaGCACTGCCCAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTTVSVE*HCPDPS
Trigger: GGATGGGTCTGGGCAGTGCCACTCAACCGACACTGT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAACAGTGTCGGTTGAGTaGCACTGCCCAGACCCATCC +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPATVSVE*HCPDPS
Trigger: GGATGGGTCTGGGCAGTGCCACTCAACCGACACTGT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGTGCTGGTTCCACTTTaGGTCCAATGTGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWVLVPL*VQCVFH
Trigger: GTGAAAAACACATTGGACCCAAAGTGGAACCAGCAC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACAAACTGACCACTATCTaGCCACGAACTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHKLTTI*PRTASV
Trigger: TACTGATGCAGTTCGTGGCCAGATAGTGGTCAGTTT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTCTTTGATCTTGACTTaGGGACTCCACGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRSLILT*GLHEPA
Trigger: TGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCCGTGTGGTCGGTTCTaGGGCGTCTGTAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWPCGRF*GVCSEP
Trigger: AGGTTCACTACAGACGCCCCAGAACCGACCACACGG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCACCGTGTGGTCGGTTCTaGGGCGTCTGTAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAPCGRF*GVCSEP
Trigger: AGGTTCACTACAGACGCCCCAGAACCGACCACACGG...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGGACTGGTGGCCGTGTaGTCGGTTCTGGGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTGLVAV*SVLGRL
Trigger: CAGACGCCCCAGAACCGACCACACGGCCACCAGTCC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGCTCTTATGCAGCTCTaGGTCCACAGATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTALMQL*VHRFQI
Trigger: GATCTGGAATCTGTGGACCCAGAGCTGCATAAGAGC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTGCAGAGCTAAGAACTaGGCTTCGATTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDCRAKN*ASIPLI
Trigger: TATGAGAGGAATCGAAGCCCAGTTCTTAGCTCTGCA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTGCAGAGCTAAGAACTaGGCTTCGATTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWCRAKN*ASIPLI
Trigger: TATGAGAGGAATCGAAGCCCAGTTCTTAGCTCTGCA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGAGCTCCAGTTCCTTCTaGTCAAAAGGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRSSSSF*SKGFSR
Trigger: TCTGCTGAAGCCTTTTGACCAGAAGGAACTGGAGCT...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAAAAGCCTTGAAGCCTTaGAGCGGGACTCGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSKALKP*SGTRVD
Trigger: GTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTT...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTTCGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTFASIR*MVNSRG
Trigger: GCCCCGGCTGTTCACCATCCACCTGATAGACGCGAA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGTTCGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWFASIR*MVNSRG
Trigger: GCCCCGGCTGTTCACCATCCACCTGATAGACGCGAA...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACTCATAGGACTCATATaGTGGAATGTCGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGLIGLI*WNVDPV
Trigger: AACCGGATCGACATTCCACCATATGAGTCCTATGAG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGTCACCAGCTGCCACTaGGAAAGGGGCCACATGAGG +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTVTSCH*ERGHMR
Trigger: CCTCATGTGGCCCCTTTCCCAGTGGCAGCTGGTGAC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTCATATGAAGACATCTaGGCAAGTGAACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDSYEDI*ASEPSS
Trigger: GCTACTCGGTTCACTTGCCCAGATGTCTTCATATGA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTCATATGAAGACATCTaGGCAAGTGAACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSYEDI*ASEPSS
Trigger: GCTACTCGGTTCACTTGCCCAGATGTCTTCATATGA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACGCAGCAAACCTCATTTaGCAGCCCTTCTATTCTAGA +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDAANLI*QPFYSR
Trigger: TCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGC...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTTTGGCCTGGACTTTTaGAATGGGGGATTAAACTTT +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSFGLDF*NGGLNF
Trigger: AAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGACTGTTAAGGTCTCTTaGTATCCTGGGGTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTTVKVS*YPGVVP
Trigger: TGGCACGACCCCAGGATACCAAGAGACCTTAACAGT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361368.7
ENST00000638461.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFFHSVG*VALPRP
Trigger: GGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTAGWAP*VGTGDS
Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGCTGGCTGGGCTCCTTaGGTTGGCACTGGTGATTCA +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFAGWAP*VGTGDS
Trigger: TGAATCACCAGTGCCAACTCAAGGAGCCCAGCCAGC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGGTCCAGTACAGGCGTaGTGTCGTTCTCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWGPVQA*CRSLGS
Trigger: GGATCCTAGAGAACGACATCACGCCTGTACTGGACC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCTATCAGGTGGATGGTaGACAGCCGGGGCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSLSGGW*TAGALP
Trigger: CGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGCAGAATATCCTGTGTaGCCAAAGCCAAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRAEYPV*PKPKAK
Trigger: TTTAGCCTTTGGCTTTGGTCACACAGGATATTCTGC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGTGAAATCTGGAATCTaGGCTCTGATAAGATATCTA +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSVKSGI*ALIRYL
Trigger: TAGATATCTTATCAGAGCTCAGATTCCAGATTTCAC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACTTTCCTACACTCCATaGCATGGTGTTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGLSYTP*HGVFTE
Trigger: TTCAGTGAAAACACCATGTCATGGAGTGTAGGAAAG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCACTCACACAACCGATaGCAAGGCGGCAAACCCACA +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWHSHNR*QGGKPT
Trigger: TGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCATCCACGACAATCTTTaGAAAAGGGTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTIHDNL*KRVREP
Trigger: AGGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGAT...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGGGACTCCACGAACCTaGAATTCCCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFGTPRT*NSLLQQ
Trigger: CTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCCTCTGGACACTTCGATaGGGCAATGACCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLWTLR*GNDQLG
Trigger: CCCAAGCTGGTCATTGCCGCATCGAAGTGTCCAGAG...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAATGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCTGCTGTCACAGGTTTaGGTCCACACCCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTLLSQV*VHTLLF
Trigger: AAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCCTTGCTTCTGGCCTTaGTCATCATATGAAGACATC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRPCFWP*SSYEDI
Trigger: GATGTCTTCATATGATGAGCAAGGCCAGAAGCAAGG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGAATTACCCTGTACTTaGCCCCACCCCAAACAAAAA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRELPCT*PHPKQK
Trigger: TTTTTGTTTGGGGTGGGGGCAAGTACAGGGTAATTC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAAGCTCTGGAAAGGTCTaGGACACTCACACAACCGAT +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKSSGKV*DTHTTD
Trigger: ATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCT...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTTTTTACCATTTGCTTTaGCATGTTGAGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ECSATDREACLERVNRSSFYHLL*HVEFFG
Trigger: CCCAAAGAACTCAACATGGCAAAGCAAATGGTAAAA...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTCTTTGCAAGGTTCTTaGCACATAACACTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDSLQGS*HITLSD
Trigger: GTCTGACAGTGTTATGTGCCAAGAACCTTGCAAAGA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAATCTGTGTAAGGGGCTaGTTCCTCCATGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKICVRG*FLHEAA
Trigger: AGCTGCTTCATGGAGGAACCAGCCCCTTACACAGAT...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCATCTGTGTAAGGGGCTaGTTCCTCCATGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFICVRG*FLHEAA
Trigger: AGCTGCTTCATGGAGGAACCAGCCCCTTACACAGAT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTCTTTGATCTTGACTTaGGGACTCCACGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSLILT*GLHEPA
Trigger: TGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTCCAGCCTGGCGGCAGTaGTCCAAGTTCATCACAGTT +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFPAWRQ*SKFITV
Trigger: AACTGTGATGAACTTGGACCACTGCCGCCAGGCTGG...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATATCTCTTTCGTATCTCTaGGCAGGAAGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKISLSYL*AGSSSS
Trigger: GGACGAGGAGCTTCCTGCCCAGAGATACGAAAGAGA...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGCTCTTATGCAGCTCTaGGTCCACAGATTCCAGATC +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFALMQL*VHRFQI
Trigger: GATCTGGAATCTGTGGACCCAGAGCTGCATAAGAGC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTCCACGCAGAAGGTGTaGTCCAGTACAGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTSTQKV*SSTGVM
Trigger: CATCACGCCTGTACTGGACCACACCTTCTGCGTGGA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATCCCCTCAGGTGATCTaGAATTCCAGGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTSPQVI*NSRASA
Trigger: GGCAGAGGCCCTGGAATTCCAGATCACCTGAGGGGA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGGAGGGATATATGGGTaGGAGCCACCAACAAAAGTC +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFGGIYG*EPPTKV
Trigger: GACTTTTGTTGGTGGCTCCCACCCATATATCCCTCC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGGAGGGATATATGGGTaGGAGCCACCAACAAAAGTC +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKGGIYG*EPPTKV
Trigger: GACTTTTGTTGGTGGCTCCCACCCATATATCCCTCC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGCCCACCATTTGGCCTaGACTTTTGGAATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHAHHLA*TFGMGD
Trigger: ATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAGACGGAGGCCAGGATaGGAACGCGTGTGTCCACCG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTRRRPG*ERVCPP
Trigger: CGGTGGACACACGCGTTCCCATCCTGGCCTCCGTCT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAGTGAACCGGAGCTCTaGAAAGGTCTGCGACACTCA +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHSEPEL*KGLRHS
Trigger: TGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 72 bp AGCTTTGGGACTGACTGGTTGGCTCTAGGGCTGATTTaGGTCTGCTCTTTCCTACACTCCATGACATGGTGT +
Preference number: 4 (lower is better)
Translates to: SFGTDWLALGLI*VCSFLHSMTWC
Trigger: ACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 72 bp GTGAGTGTGAAGTCGTCCCCCTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTTTGTAGAACAGTATCT +
Preference number: 4 (lower is better)
Translates to: VSVKSSPSAVTG*RPHPTFCRTVS
Trigger: AGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGAGGGGGACGACTTCACACTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGCTCCCTGTTTCTTGTaGATTTTCTTATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRAPCFL*IFLWFH
Trigger: GTGGAACCATAAGAAAATTCACAAGAAACAGGGAGC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCGACAGTTCGTGTCTaGGGACTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAATVRV*GLSASG
Trigger: TCCAGAAGCTGAAAGTCCTCAGACACGAACTGTCGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCACAGATTCCAGATCTaGGAGCTGGATGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFHRFQI*ELDGLP
Trigger: GGGAAGCCCATCCAGCTCTCAGATCTGGAATCTGTG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGGTCCAGTACAGGCGTaGTGTCGTTCTCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFGPVQA*CRSLGS
Trigger: GGATCCTAGAGAACGACATCACGCCTGTACTGGACC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCTCTTATTCTCCTCTGTaGCTGGCACATTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTSYSPL*LAHFCH
Trigger: ATGGCAGAAATGTGCCAGTCACAGAGGAGAATAAGA...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGCTTCAGCAGATGTTaGGGGATGAGCTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGFSRC*GMSSLN
Trigger: GTTCAATGAGCTCATCCCTCAACATCTGCTGAAGCC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTATCCAGGCCGCCTATaGTCAGCTCCAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWYPGRL*SAPVPS
Trigger: AGAAGGAACTGGAGCTGATCATAGGCGGCCTGGATA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAAAGAGCTCAGGGCTGTaGGCCTTATCACCACATGGG +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTKSSGL*ALSPHG
Trigger: CCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGCCTCAAGGCTGTTTTaGGATGGAATAGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFASRLF*DGIAGI
Trigger: TATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACACCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCAGGGGAAACACATTTTaGCTCAAGCTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFRGNTF*LKLPAV
Trigger: CACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGAAATGTCTTGCTCATaGATTACCCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTEMSCS*ITLYLP
Trigger: GGGCAAGTACAGGGTAATTCATGAGCAAGACATTTC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTTCCTTCCTAGTTACTaGAGATTTTGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDFLPSY*RFWIPP
Trigger: TGGTGGTATCCAAAATCTTCAGTAACTAGGAAGGAA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCCTGTTTGGAAAGAGTaGACCGGAGCTCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWPVWKE*TGALER
Trigger: CCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGTGACCACCTTAATCTaGATTTGGACCATACGTCCG +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFVTTLI*IWTIRP
Trigger: CGGACGTATGGTCCAAATTCAGATTAAGGTGGTCAC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTTTCTAACAGTCCTCTaGAGTCCACCACCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFFLTVL*SPPPSR
Trigger: GCGGCTCGGTGGTGGACTGCAGAGGACTGTTAGAAA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTTGGGTTTCAGTTCATaGTGCAGGATCCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLGFSS*CRIRPK
Trigger: CTTCGGGCGGATCCTGCAGCATGAACTGAAACCCAA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCTGTCGGCCACACAGTaGTTCAGCCGCGTGTTCGAC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTLSATQ*FSRVFD
Trigger: GTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCGCCTGTAGAACCTTaGAAAGCCTTGAAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSAPVEP*KALKPW
Trigger: CCAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACTGCTGTCACAGGTTTaGGTCCACACCCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKLLSQV*VHTLLF
Trigger: AAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGATAGGAACATTGGCCTaGTGTTTTCTGCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTIGTLA*CFLPKF
Trigger: GAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTAT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAATCTTTGATCTTGACTTaGGGACTCCACGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKSLILT*GLHEPA
Trigger: TGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGA...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGGTCCCCGAGGGACTTaGTATCCTGGGGTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSGPRGT*YPGVVP
Trigger: TGGCACGACCCCAGGATACCAAGTCCCTCGGGGACC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACTGGGCTCAGATGTATaGCCTTGTAGAAGGAATTCG +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKLGSDV*PCRRNS
Trigger: CGAATTCCTTCTACAAGGCCATACATCTGAGCCCAG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACAGGACTTTCAGCTTCTaGACTAGATCTCTTTCGTAT +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDRTFSF*TRSLSY
Trigger: ATACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAGTAAAGCCACTCCCTaGCCACACCACCGTAATCCA +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTSKATP*PHHRNP
Trigger: TGGATTACGGTGGTGTGGCCAGGGAGTGGCTTTACT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAAGTAAAGCCACTCCCTaGCCACACCACCGTAATCCA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPASKATP*PHHRNP
Trigger: TGGATTACGGTGGTGTGGCCAGGGAGTGGCTTTACT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACATAGGACTCATATGGTaGAATGTCGATCCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDIGLIW*NVDPVK
Trigger: TTTAACCGGATCGACATTCCACCATATGAGTCCTAT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGATAGGACTCATATGGTaGAATGTCGATCCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWIGLIW*NVDPVK
Trigger: TTTAACCGGATCGACATTCCACCATATGAGTCCTAT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCTCATAGGACTCATATaGTGGAATGTCGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTLIGLI*WNVDPV
Trigger: AACCGGATCGACATTCCACCATATGAGTCCTATGAG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTCATATGAAGACATCTaGGCAAGTGAACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSYEDI*ASEPSS
Trigger: GCTACTCGGTTCACTTGCCCAGATGTCTTCATATGA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGCAGCAAACCTCATTTaGCAGCCCTTCTATTCTAGA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTAANLI*QPFYSR
Trigger: TCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTTTGGCCTGGACTTTTaGAATGGGGGATTAAACTTT +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWFGLDF*NGGLNF
Trigger: AAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGCCCACCATTTGGCCTaGACTTTTGGAATGGGGGAT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWAHHLA*TFGMGD
Trigger: ATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCAGCACCAACCAGCATaGGGATGGCGGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSQHQPA*GWRCSC
Trigger: GCAGCTGCACCGCCATCCCCATGCTGGTTGGTGCTG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCAGTGAACCGGAGCTCTaGAAAGGTCTGCGACACTCA +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTSEPEL*KGLRHS
Trigger: TGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTFHSVG*VALPRP
Trigger: GGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGGCACTGGTGATTCATaGTGTGGTGTAACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTGTGDS*CGVTLG
Trigger: ACCCAAGGTTACACCACATCATGAATCACCAGTGCC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGTGGTCGGGGTTGATTaGAGAATCCGGATTTATTTG +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKVVGVD*RIRIYL
Trigger: CAAATAAATCCGGATTCTTCAATCAACCCCGACCAC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCCCTTTCCCCTCAGGTaGTCTGGAATTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTPFPLR*SGIPGP
Trigger: AGGCCCTGGAATTCCAGATCACCTGAGGGGAAAGGG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTTCCTTCCTAGTTACTaGAGATTTTGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRFLPSY*RFWIPP
Trigger: TGGTGGTATCCAAAATCTTCAGTAACTAGGAAGGAA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAAGTCTTTTAAACCATaGGACCCTGGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTKSFKP*DPGFLP
Trigger: AGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCCTGTTTGGAAAGAGTaGACCGGAGCTCTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFPVWKE*TGALER
Trigger: CCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAACACAGATCACACGTaGGTGGGCTTCGCGCGGACC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSNTDHT*VGFART
Trigger: GGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGGGACTCCACGAACCTaGAATTCCCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTGTPRT*NSLLQQ
Trigger: CTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTTGGGTTTCAGTTCATaGTGCAGGATCCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFLGFSS*CRIRPK
Trigger: CTTCGGGCGGATCCTGCAGCATGAACTGAAACCCAA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTCTGTTGCCTTTGGTTaGTTTTCACTCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSVAFG*FSLHSK
Trigger: TTTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGAATTCCAGGGCCTCTaGCAGCTTTGCAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTEFQGL*QLCRRC
Trigger: GCACCTCCTGCAAAGCTGGCAGAGGCCCTGGAATTC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATATGGCCTGCTGTTTTCTaGCCAAGTTCAGCTATTGGA +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIWPAVF*PSSAIG
Trigger: TCCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCA...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTATGAGACACAGGATGTaGCCACCTGTGGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTMRHRM*PPVGAR
Trigger: CCTTGCCCCCACAGGTGGGCACATCCTGTGTCTCAT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTAGCTCTGGAAAGGTCTaGGACACTCACACAACCGAT +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFSSGKV*DTHTTD
Trigger: ATCGGTTGTGTGAGTGTCGCAGACCTTTCCAGAGCT...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTTTTACCATTTGCTTTaGCATGTTGAGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWFYHLL*HVEFFG
Trigger: CCCAAAGAACTCAACATGGCAAAGCAAATGGTAAAA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATCTCTTTCGTATCTCTaGGCAGGAAGCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTSLSYL*AGSSSS
Trigger: GGACGAGGAGCTTCCTGCCCAGAGATACGAAAGAGA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTTCGCGTCTATCAGGTaGATGGTGAACAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTFASIR*MVNSRG
Trigger: GCCCCGGCTGTTCACCATCCACCTGATAGACGCGAA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCACGGTTAAAGCAGGTATaGGCCTTCGGAAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPARLKQV*AFGRLS
Trigger: AGACAACCTTCCGAAGGCCCATACCTGCTTTAACCG...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGAAGCTGGATGCTTTTaGTCTGGTGGCCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAEAGCF*SGGHEL
Trigger: TAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAAACAGTATCTTTGGGTaGATTTACATCATCGAGGTT +
Preference number: 4 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGNSIFG*IYIIEV
Trigger: AACCTCGATGATGTAAATCCACCCAAAGATACTGTT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCTAAGCCCACCATTTaGCCTGGACTTTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAAKPTI*PGLLEW
Trigger: CCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGGCTAAGCCCACCATTTaGCCTGGACTTTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWAKPTI*PGLLEW
Trigger: CCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGC...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCAGATCACACGTGAGTaGGCTTCGCGCGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTQITRE*ASRGPK
Trigger: TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGGCACTGGTGATTCATaGTGTGGTGTAACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFGTGDS*CGVTLG
Trigger: ACCCAAGGTTACACCACATCATGAATCACCAGTGCC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGAGTTGGCACTGGTaGTTCATGATGTGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHLSWHW*FMMWCN
Trigger: GTTACACCACATCATGAATCACCAGTGCCAACTCAA...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATACAAGTGGTCGGGGTTaGTTGAAGAATCCGGATTTA +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHTSGRG*LKNPDL
Trigger: TAAATCCGGATTCTTCAATCAACCCCGACCACTTGT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAAGAGCTCAGGGCTGTaGGCCTTATCACCACATGGG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTKSSGL*ALSPHG
Trigger: CCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCCTCAAGGCTGTTTTaGGATGGAATAGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAASRLF*DGIAGI
Trigger: TATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCATTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTCACAGCTTTGGGACTaGCTGGTTGGCTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTSQLWD*LVGSRA
Trigger: AGCCCTAGAGCCAACCAGTCAGTCCCAAAGCTGTGA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTTCCTTCCTAGTTACTaGAGATTTTGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTFLPSY*RFWIPP
Trigger: TGGTGGTATCCAAAATCTTCAGTAACTAGGAAGGAA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCATCCACGACAATCTTTaGAAAAGGGTCAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTIHDNL*KRVREP
Trigger: AGGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGAT...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCAGCAGCAGCACCGGTaGTATCTGTGTAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSQQQHR*YLCKGL
Trigger: CAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTCATTGAACCCCTTCTaGAGAGCTAAGAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWSLNPF*RAKNWA
Trigger: AGCCCAGTTCTTAGCTCTGCAGAAGGGGTTCAATGA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTCATTGAACCCCTTCTaGAGAGCTAAGAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTSLNPF*RAKNWA
Trigger: AGCCCAGTTCTTAGCTCTGCAGAAGGGGTTCAATGA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCACCACCGCACGATGTTaGTGTCGGCCACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSTTARC*CRPHSA
Trigger: AGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAACGTCTCCACCGCTTaGCAGAACCACCGCACGATG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSNVSTA*QNHRTM
Trigger: CATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTCTGTTGCCTTTGGTTaGTTTTCACTCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFSVAFG*FSLHSK
Trigger: TTTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAATCTGTTGCCTTTGGTTaGTTTTCACTCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKSVAFG*FSLHSK
Trigger: TTTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGA...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATGCACAGAAGCTGGATaGTTTTGGTCTGGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTCTEAG*FWSGGH
Trigger: ATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCTGCTGTCACAGGTTTaGGTCCACACCCTACTTTTT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWLLSQV*VHTLLF
Trigger: AAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGATTAAACTTTCCTCCTaGAGCAAACCTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTIKLSS*SKPHLA
Trigger: TGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAAT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCCGTGTGGTCGGTTCTaGGGCGTCTGTAGTGAACCT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSPCGRF*GVCSEP
Trigger: AGGTTCACTACAGACGCCCCAGAACCGACCACACGG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACAAAGATTTCTTCTCTaGACACTTCGATGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKQRFLL*TLRCGN
Trigger: ATTGCCGCATCGAAGTGTCCAGAGAAGAAATCTTTG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAAAGCCTTGAAGCCTTaGAGCGGGACTCGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSKALKP*SGTRVD
Trigger: GTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCGGTTAAAGCAGGTATaGGCCTTCGGAAGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFRLKQV*AFGRLS
Trigger: AGACAACCTTCCGAAGGCCCATACCTGCTTTAACCG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATATCATATGAAGACATCTaGGCAAGTGAACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKISYEDI*ASEPSS
Trigger: GCTACTCGGTTCACTTGCCCAGATGTCTTCATATGA...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGGATGTGCCCACCTGTaGGGGCAAGGCAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTGCAHL*GQGRTF
Trigger: AAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATCC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCAGATCACACGTGAGTaGGCTTCGCGCGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSQITRE*ASRGPK
Trigger: TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 72 bp TTCAAAGAGGCTAAGCCCACCATTTGGCCTGGACTTTaGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FKEAKPTIWPGL*EWGIKLSSCSK
Trigger: TTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGCCTCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTTGAGTTGGCACTGGTaGTTCATGATGTGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLSWHW*FMMWCN
Trigger: GTTACACCACATCATGAATCACCAGTGCCAACTCAA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGTGGTCGGGGTTGATTaGAGAATCCGGATTTATTTG +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAVVGVD*RIRIYL
Trigger: CAAATAAATCCGGATTCTTCAATCAACCCCGACCAC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGTGGTCGGGGTTGATTaGAGAATCCGGATTTATTTG +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFVVGVD*RIRIYL
Trigger: CAAATAAATCCGGATTCTTCAATCAACCCCGACCAC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAACAAGTGGTCGGGGTTaGTTGAAGAATCCGGATTTA +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSTSGRG*LKNPDL
Trigger: TAAATCCGGATTCTTCAATCAACCCCGACCACTTGT...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGGTCCAGTACAGGCGTaGTGTCGTTCTCTAGGATCC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSGPVQA*CRSLGS
Trigger: GGATCCTAGAGAACGACATCACGCCTGTACTGGACC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTCTTATTCTCCTCTGTaGCTGGCACATTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFSYSPL*LAHFCH
Trigger: ATGGCAGAAATGTGCCAGTCACAGAGGAGAATAAGA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGCAGAATATCCTGTGTaGCCAAAGCCAAAGGCTAAA +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTAEYPV*PKPKAK
Trigger: TTTAGCCTTTGGCTTTGGTCACACAGGATATTCTGC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAAGAGCTCAGGGCTGTaGGCCTTATCACCACATGGG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSKSSGL*ALSPHG
Trigger: CCCATGTGGTGATAAGGCTCACAGCCCTGAGCTCTT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCCGGCTGCTGGGATGTaGAATCTGGAATCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSPAAGM*NLESEL
Trigger: GAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTTTCCAGTTGGAAATTaGTCTGCTACCCAGAACCGG +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFFPVGN*SATQNR
Trigger: CCGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATCTTTCCTACACTCCATaGCATGGTGTTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHLSYTP*HGVFTE
Trigger: TTCAGTGAAAACACCATGTCATGGAGTGTAGGAAAG...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGAAATGTCTTGCTCATaGATTACCCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFEMSCS*ITLYLP
Trigger: GGGCAAGTACAGGGTAATTCATGAGCAAGACATTTC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGTGACCACCTTAATCTaGATTTGGACCATACGTCCG +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTVTTLI*IWTIRP
Trigger: CGGACGTATGGTCCAAATTCAGATTAAGGTGGTCAC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCTGAGGGGTTTAGTTTaGATAGATCCAAACGCTGGT +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWLRGLV*IDPNAG
Trigger: ACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGCCTCCAGGAAAAGCTaGTCCAATTCCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTASRKS*SNSFSF
Trigger: AAAGGAGAAGGAATTGGAGCAGCTTTTCCTGGAGGC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAATAGGAACATTGGCCTaGTGTTTTCTGCCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAIGTLA*CFLPKF
Trigger: GAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTAT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGAATTACCCTGTACTTaGCCCCACCCCAAACAAAAA +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFELPCT*PHPKQK
Trigger: TTTTTGTTTGGGGTGGGGGCAAGTACAGGGTAATTC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGAATTACCCTGTACTTaGCCCCACCCCAAACAAAAA +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWELPCT*PHPKQK
Trigger: TTTTTGTTTGGGGTGGGGGCAAGTACAGGGTAATTC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAATTAAACTTTCCTCCTaGAGCAAACCTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKIKLSS*SKPHLA
Trigger: TGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAAT...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCATTAAACTTTCCTCCTaGAGCAAACCTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFIKLSS*SKPHLA
Trigger: TGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAAT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGTGCTGGTTCCACTTTaGGTCCAATGTGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFVLVPL*VQCVFH
Trigger: GTGAAAAACACATTGGACCCAAAGTGGAACCAGCAC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAAAACTGACCACTATCTaGCCACGAACTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAKLTTI*PRTASV
Trigger: TACTGATGCAGTTCGTGGCCAGATAGTGGTCAGTTT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTCTTTGATCTTGACTTaGGGACTCCACGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFSLILT*GLHEPA
Trigger: TGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCAGGACTTTCAGCTTCTaGACTAGATCTCTTTCGTAT +
Preference number: 4 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFRTFSF*TRSLSY
Trigger: ATACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACAAAGATTTCTTCTCTaGACACTTCGATGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIQRFLL*TLRCGN
Trigger: ATTGCCGCATCGAAGTGTCCAGAGAAGAAATCTTTG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTGCAGAGCTAAGAACTaGGCTTCGATTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFCRAKN*ASIPLI
Trigger: TATGAGAGGAATCGAAGCCCAGTTCTTAGCTCTGCA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTGCAGAGCTAAGAACTaGGCTTCGATTCCTCTCATA +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTCRAKN*ASIPLI
Trigger: TATGAGAGGAATCGAAGCCCAGTTCTTAGCTCTGCA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCCTCATAGGACTCATATaGTGGAATGTCGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLIGLI*WNVDPV
Trigger: AACCGGATCGACATTCCACCATATGAGTCCTATGAG...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCACTCATAGGACTCATATaGTGGAATGTCGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSLIGLI*WNVDPV
Trigger: AACCGGATCGACATTCCACCATATGAGTCCTATGAG...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAAGACTCTGTTGCCTTTaGTTGCTTTTCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPARLCCL*LLFTPQ
Trigger: CTGTGGAGTGAAAAGCAACCAAAGGCAACAGAGTCT...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTTGAGATGGAATAGCTaGCATAGCCACCAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFLRWNS*HSHQFQ
Trigger: TTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTCAAGCTTCCTGCTGTaGCAGAATTCCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHSSFLL*QNSNKH
Trigger: ATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGA...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATATCAAGCTTCCTGCTGTaGCAGAATTCCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKISSFLL*QNSNKH
Trigger: ATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGA...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTTCTATGGACAACAGTaGCACAGAGGTCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTFYGQQ*HRGHSF
Trigger: AAAGCTGTGACCTCTGTGCCACTGTTGTCCATAGAA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCAGCAAACCTCATTTaGCAGCCCTTCTATTCTAGA +
Preference number: 4 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAAANLI*QPFYSR
Trigger: TCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCCTGGACTTTTGGAATaGGGGATTAAACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWPGLLE*GIKLSS
Trigger: GGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 72 bp GGGTGGATTTACATCATCGAGGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACACCAAGCCAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GWIYIIEVILSP*LLSEFTPSQQL
Trigger: TAGCTGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGCTCCCTGTTTCTTGTaGATTTTCTTATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTAPCFL*IFLWFH
Trigger: GTGGAACCATAAGAAAATTCACAAGAAACAGGGAGC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGGCTCCCTGTTTCTTGTaGATTTTCTTATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWAPCFL*IFLWFH
Trigger: GTGGAACCATAAGAAAATTCACAAGAAACAGGGAGC...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCTTTCCTACACTCCATaGCATGGTGTTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWLSYTP*HGVFTE
Trigger: TTCAGTGAAAACACCATGTCATGGAGTGTAGGAAAG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCCTTTCCTACACTCCATaGCATGGTGTTTTCACTGAA +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLSYTP*HGVFTE
Trigger: TTCAGTGAAAACACCATGTCATGGAGTGTAGGAAAG...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTAAGTCTTTTAAACCATaGGACCCTGGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFKSFKP*DPGFLP
Trigger: AGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTT...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTCTGTTGCCTTTGGTTaGTTTTCACTCCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFSVAFG*FSLHSK
Trigger: TTTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCAGCTTTGCAGGAGGTaGACAGAAGCTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTQLCRR*TEAGCF
Trigger: AAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 4 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 4 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAGTGCTGGTTCCACTTTaGGTCCAATGTGTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTVLVPL*VQCVFH
Trigger: GTGAAAAACACATTGGACCCAAAGTGGAACCAGCAC...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAAAACTGACCACTATCTaGCCACGAACTGCATCAGTA +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTKLTTI*PRTASV
Trigger: TACTGATGCAGTTCGTGGCCAGATAGTGGTCAGTTT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCAAAGATTTCTTCTCTaGACACTTCGATGCGGCAAT +
Preference number: 4 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWQRFLL*TLRCGN
Trigger: ATTGCCGCATCGAAGTGTCCAGAGAAGAAATCTTTG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCAGACTCTGTTGCCTTTaGTTGCTTTTCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFRLCCL*LLFTPQ
Trigger: CTGTGGAGTGAAAAGCAACCAAAGGCAACAGAGTCT...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCAAGGCTGTTTTGAGATaGAATAGCTGGCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFKAVLR*NSWHSH
Trigger: GTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTT...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGTAGAACAGTATCTTTaGGTGGATTTACATCATCGA +
Preference number: 4 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKVEQYL*VDLHHR
Trigger: TCGATGATGTAAATCCACCCAAAGATACTGTTCTAC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGCTAAGCCCACCATTTaGCCTGGACTTTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTAKPTI*PGLLEW
Trigger: CCATTCCAAAAGTCCAGGCCAAATGGTGGGCTTAGC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAGTGAACCGGAGCTCTaGAAAGGTCTGCGACACTCA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSEPEL*KGLRHS
Trigger: TGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGGCACTGGTGATTCATaGTGTGGTGTAACCTTGGGT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSGTGDS*CGVTLG
Trigger: ACCCAAGGTTACACCACATCATGAATCACCAGTGCC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCAGCTTTGCAGGAGGTaGACAGAAGCTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSQLCRR*TEAGCF
Trigger: AAAGCATCCAGCTTCTGTGCACCTCCTGCAAAGCTG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATATCACCACATGGGTTaGAACACAGCAGAATATCCT +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTYHHMG*NTAEYP
Trigger: AGGATATTCTGCTGTGTTGCAACCCATGTGGTGATA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAGTTGGAAATTGATCTaGTACCCAGAACCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTSWKLI*YPEPAA
Trigger: AGCAGCCGGTTCTGGGTAGCAGATCAATTTCCAACT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTGGCCTGCTGTTTTCTaGCCAAGTTCAGCTATTGGA +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTWPAVF*PSSAIG
Trigger: TCCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAAGGACTTTCAGCTTCTaGACTAGATCTCTTTCGTAT +
Preference number: 4 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSRTFSF*TRSLSY
Trigger: ATACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCT...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTCAAGCTTCCTGCTGTaGCAGAATTCCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFSSFLL*QNSNKH
Trigger: ATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAGCTTTGGGACTGACTaGTTGGCTCTAGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSFGTD*LALGLI
Trigger: AATCAGCCCTAGAGCCAACCAGTCAGTCCCAAAGCT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGTTTGGCCTGGACTTTTaGAATGGGGGATTAAACTTT +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWFGLDF*NGGLNF
Trigger: AAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAA...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCACTGTTAAGGTCTCTTaGTATCCTGGGGTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSTVKVS*YPGVVP
Trigger: TGGCACGACCCCAGGATACCAAGAGACCTTAACAGT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361368.7
ENST00000638461.1
3UTR CAA 72 bp CTCCAATTCCTTCTCCTTTCAAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGTGGCAGAATTCCAATA +
Preference number: 4 (lower is better)
Translates to: LQFLLLSKGKHI*TQASCCGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTTTGAAAGGAGAAGGAATTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTCTTATTCTCCTCTGTaGCTGGCACATTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTSYSPL*LAHFCH
Trigger: ATGGCAGAAATGTGCCAGTCACAGAGGAGAATAAGA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGAAATGTCTTGCTCATaGATTACCCTGTACTTGCCC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTEMSCS*ITLYLP
Trigger: GGGCAAGTACAGGGTAATTCATGAGCAAGACATTTC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCTCTCTTTTCAGAACTTaGGAGAGCCCTTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSLFRT*ESPFPV
Trigger: GACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGA...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGTGACCACCTTAATCTaGATTTGGACCATACGTCCG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSVTTLI*IWTIRP
Trigger: CGGACGTATGGTCCAAATTCAGATTAAGGTGGTCAC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCTGAGGGGTTTAGTTTaGATAGATCCAAACGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTLRGLV*IDPNAG
Trigger: ACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCTCATTGAACCCCTTCTaGAGAGCTAAGAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSLNPF*RAKNWA
Trigger: AGCCCAGTTCTTAGCTCTGCAGAAGGGGTTCAATGA...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCCTTGCTTCTGGCCTTaGTCATCATATGAAGACATC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTPCFWP*SSYEDI
Trigger: GATGTCTTCATATGATGAGCAAGGCCAGAAGCAAGG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCATTAAACTTTCCTCCTaGAGCAAACCTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFIKLSS*SKPHLA
Trigger: TGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAAT...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGTTTTACCATTTGCTTTaGCATGTTGAGTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWFYHLL*HVEFFG
Trigger: CCCAAAGAACTCAACATGGCAAAGCAAATGGTAAAA...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCTGGGCTCAGATGTATaGCCTTGTAGAAGGAATTCG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSLGSDV*PCRRNS
Trigger: CGAATTCCTTCTACAAGGCCATACATCTGAGCCCAG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS-3UTR CCA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAAGGACTTTCAGCTTCTaGACTAGATCTCTTTCGTAT +
Preference number: 4 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTRTFSF*TRSLSY
Trigger: ATACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAGCTCCAGTTCCTTCTaGTCAAAAGGCTTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSSSSF*SKGFSR
Trigger: TCTGCTGAAGCCTTTTGACCAGAAGGAACTGGAGCT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
3UTR CAA 72 bp TTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTaGGGTGGATTTACATCATCGAGGTTATCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LRPHPTFCRTVS*GGFTSSRLSFH
Trigger: GTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGCTCCCTGTTTCTTGTaGATTTTCTTATGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTAPCFL*IFLWFH
Trigger: GTGGAACCATAAGAAAATTCACAAGAAACAGGGAGC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCACAAGTGGTCGGGGTTaGTTGAAGAATCCGGATTTA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSTSGRG*LKNPDL
Trigger: TAAATCCGGATTCTTCAATCAACCCCGACCACTTGT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCTCTTATTCTCCTCTGTaGCTGGCACATTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSYSPL*LAHFCH
Trigger: ATGGCAGAAATGTGCCAGTCACAGAGGAGAATAAGA...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAGACTTCGACAGCAGTaGAATGTCTTGCTCATGAAT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTRLRQQ*NVLLMN
Trigger: ATTCATGAGCAAGACATTTCACTGCTGTCGAAGTCT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR TCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAAGTCTTTTAAACCATaGGACCCTGGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTKSFKP*DPGFLP
Trigger: AGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR GCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTTGACTCAAGCTTCCTaGTGTGGCAGAATTCCAATA +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTLTQAS*CGRIPI
Trigger: TATTGGAATTCTGCCACAGCAGGAAGCTTGAGTCAA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAGACTCTGTTGCCTTTaGTTGCTTTTCACTCCACAG +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSRLCCL*LLFTPQ
Trigger: CTGTGGAGTGAAAAGCAACCAAAGGCAACAGAGTCT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCAGCCTTATCACCACATaGGTTGCAACACAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSSLITT*VATQQN
Trigger: ATTCTGCTGTGTTGCAACCCATGTGGTGATAAGGCT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTCTGGGATGTGAAATCTaGAATCTGAGCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTLGCEI*NLSSDK
Trigger: CTTATCAGAGCTCAGATTCCAGATTTCACATCCCAG...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTCAAGCTTCCTGCTGTaGCAGAATTCCAATAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTSSFLL*QNSNKH
Trigger: ATGCTTATTGGAATTCTGCCACAGCAGGAAGCTTGA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCATAGGACTCATATGGTaGAATGTCGATCCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSIGLIW*NVDPVK
Trigger: TTTAACCGGATCGACATTCCACCATATGAGTCCTAT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CCA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGTAGAACAGTATCTTTaGGTGGATTTACATCATCGA +
Preference number: 4 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTVEQYL*VDLHHR
Trigger: TCGATGATGTAAATCCACCCAAAGATACTGTTCTAC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp GGCGTCCGGGCGGCAGGCGGATGGTCGAGCCGGGAGATCGGCGCTTaGTGCGGCGCTCTGACCCTCGCTGCTTCCAGCCGAGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GVRAAGGWSSREIGA*CGALTLAASSRAQS
Trigger: GGACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCGGACGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS CCA 90 bp CCGGGACACAAACTCCGCGGCCCAGGCGTCCGGGCGGCAGGCGGATaGTCGAGCCGGGAGATCGGCGCTTGCTGCGGCGCTCTGACCCTC +
Preference number: 5 (lower is better)
Translates to: PGHKLRGPGVRAAGG*SSREIGACCGALTL
Trigger: GAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCGGACGCCTGGGCCGCGGAGTTTGTGTCCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS GCA 90 bp GTCCGGGCGGCAGGCGGATGGTCGAGCCGGGAGATCGGCGCTTGCTaGGGCGCTCTGACCCTCGCTGCTTCCAGCCGAGCCCAGTCCCGA +
Preference number: 5 (lower is better)
Translates to: VRAAGGWSSREIGAC*GALTLAASSRAQSR
Trigger: TCGGGACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCGGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS CCA 90 bp ATTCCCTCCTCCAGCAGCAGCACCGGTGCTATCTGTGTAAGGGGCTaGTTCCTCCATGAAGCAGCTGAGCGGCCTCCCAGGCCCGGAGTC +
Preference number: 5 (lower is better)
Translates to: IPSSSSSTGAICVRG*FLHEAAERPPRPGV
Trigger: GACTCCGGGCCTGGGAGGCCGCTCAGCTGCTTCATGGAGGAACCAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTGGAGGAGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS-3UTR CAA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAACCACCGCACGATGTaGCTGTCGGCCACACAGTGC +
Preference number: 5 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKNHRTM*LSATQC
Trigger: GCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACAAAGCCTTGAAGCCTaGGAGCGGGACTCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: PPRGATQITREWASRGPKQSLEA*ERDSRG
Trigger: TCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTTG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp GCCTTGAAGCCTTGGAGCGGGACTCGCGTGGACCCAGTCACAAACTaGAGGAGCCTGGCCCTCCTTTCTTCATCGAACGTCTCCACCGCT +
Preference number: 5 (lower is better)
Translates to: ALKPWSGTRVDPVTN*RSLALLSSSNVSTA
Trigger: AGCGGTGGAGACGTTCGATGAAGAAAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCCAAGGCTTCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp CAGGTATGGGCCTTCGGAAGGTTGTCTGTGTTCGCGTCTATCAGGTaGATGGTGAACAGCCGGGGCCCTGCCGCGCCTGTAGAACCTTGC +
Preference number: 5 (lower is better)
Translates to: QVWAFGRLSVFASIR*MVNSRGPAAPVEPC
Trigger: GCAAGGTTCTACAGGCGCGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAGACGCGAACACAGACAACCTTCCGAAGGCCCATACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCCGGGAGATCGGCGCTaGCTGCGGCGCTCTGACCCT +
Preference number: 5 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRPGDRR*LRRSDP
Trigger: AGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG +
Preference number: 5 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKNLLMA*ESSRTQ
Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGCGGCAATGACCAGCTaGGGGCTGCTGAAGCGACAG +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTAAMTS*GLLKRQ
Trigger: CTGTCGCTTCAGCAGCCCCAAGCTGGTCATTGCCGC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTAACCACCGCACGATGTaGCTGTCGGCCACACAGTGC +
Preference number: 5 (lower is better)
Translates to: ECSATDREACLERVNRSSNHRTM*LSATQC
Trigger: GCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGAACGTCTCCACCGCTaGCCAGAACCACCGCACGAT +
Preference number: 5 (lower is better)
Translates to: ECSATDREACLERVNRSSERLHR*PEPPHD
Trigger: ATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTTC...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp CTTCATCGAACGTCTCCACCGCTTGCCAGAACCACCGCACGATGTTaGTGTCGGCCACACAGTGCTTCAGCCGCGTGTTCGACTTCCAGT +
Preference number: 5 (lower is better)
Translates to: LHRTSPPLARTTARC*CRPHSASAACSTSS
Trigger: ACTGGAAGTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTTCGATGAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACCGGGAGATCGGCGCTaGCTGCGGCGCTCTGACCCT +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKPGDRR*LRRSDP
Trigger: AGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAACATCCACGACAATCTTaGCAAAAGGGTCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKHPRQS*QKGQGA
Trigger: GGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGATG...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACATCCACGACAATCTTaGCAAAAGGGTCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PPRGATQITREWASRGPKHPRQS*QKGQGA
Trigger: GGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGATG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAAGTCTTTGATCTTGACTaGGGGACTCCACGAACCTGC +
Preference number: 5 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKVFDLD*GTPRTC
Trigger: GCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGAC...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp TGCTGCAGGATCCGCCCGAAGGCGTTGTGTTCCACGCAGAAGGTGTaGTCCAGTACAGGCGTGATGTCGTTCTCTAGGATCCACACCAAG +
Preference number: 5 (lower is better)
Translates to: CCRIRPKALCSTQKV*SSTGVMSFSRIHTK
Trigger: CTTGGTGTGGATCCTAGAGAACGACATCACGCCTGTACTGGACCACACCTTCTGCGTGGAACACAACGCCTTCGGGCGGATCCTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG +
Preference number: 5 (lower is better)
Translates to: ECSATDREACLERVNRSSNLLMA*ESSRTQ
Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAACTGTGCCTGAAGTCTTaGATCTTGACTTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: PPRGATQITREWASRGPKLCLKS*ILTWGL
Trigger: GAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAG...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGATCCGCCCGAAGGCGTaGTGTTCCACGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWIRPKA*CSTQKV
Trigger: CACCTTCTGCGTGGAACACAACGCCTTCGGGCGGAT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAAACCACCGCACGATGTaGCTGTCGGCCACACAGTGC +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGNHRTM*LSATQC
Trigger: GCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTT...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGGAACGTCTCCACCGCTaGCCAGAACCACCGCACGAT +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWERLHR*PEPPHD
Trigger: ATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTTC...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGAACGTCTCCACCGCTaGCCAGAACCACCGCACGAT +
Preference number: 5 (lower is better)
Translates to: EACLERVNRSSGKVCDTHERLHR*PEPPHD
Trigger: ATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTTC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCCGCGCCTGTAGAACCTaGCAAAGCCTTGAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRRACRT*QSLEAL
Trigger: CAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGCG...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGCCATGTTGAGTTCTTaGGGGTGGTTCAAAAGGACC +
Preference number: 5 (lower is better)
Translates to: PPRGATQITREWASRGPKAMLSS*GWFKRT
Trigger: GGTCCTTTTGAACCACCCCAAAGAACTCAACATGGC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCCCGGGAGATCGGCGCTaGCTGCGGCGCTCTGACCCT +
Preference number: 5 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTPGDRR*LRRSDP
Trigger: AGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGG...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGATGGCGGTGCAGCTGCTAAGGCTCGCCCCCGACTCCTCCCAACAGCAAAAATCTGAGGGGTTTAGTTaGCATAGATCCAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: GMAVQLLRLAPDSSQQQKSEGFS*HRSKRW
Trigger: CCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGA...TTTTTGCTGTTGGGAGGAGTCGGGGGCGAGCCTTAGCAGCTGCACCGCCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGCGGCAATGACCAGCTaGGGGCTGCTGAAGCGACAG +
Preference number: 5 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTAAMTS*GLLKRQ
Trigger: CTGTCGCTTCAGCAGCCCCAAGCTGGTCATTGCCGC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGGCGGCAATGACCAGCTaGGGGCTGCTGAAGCGACAG +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTAAMTS*GLLKRQ
Trigger: CTGTCGCTTCAGCAGCCCCAAGCTGGTCATTGCCGC...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCACCGAGAGGGGCAACACAGATCACACGTGAGTGGGCTTCGCGCGGACCCAAAGACAAGTGGTCGGGGTaGATTGAAGAATCCGGATTT +
Preference number: 5 (lower is better)
Translates to: PPRGATQITREWASRGPKDKWSG*IEESGF
Trigger: AAATCCGGATTCTTCAATCAACCCCGACCACTTGTC...TTTGGGTCCGCGCGAAGCCCACTCACGTGTGATCTGTGTTGCCCCTCTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGCAAAGCCTTGAAGCCTaGGAGCGGGACTCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRQSLEA*ERDSRG
Trigger: TCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTTG...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGAACCTTGCAAAGCCTaGAAGCCTTGGAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTEPCKA*KPWSGT
Trigger: AGTCCCGCTCCAAGGCTTCAAGGCTTTGCAAGGTTC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp TCCTCTGTGACTGGCACATTTCTGCCATTGGGTTTCAGTTCATGCTaGAGGATCCGCCCGAAGGCGTTGTGTTCCACGCAGAAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SSVTGTFLPLGFSSC*RIRPKALCSTQKVW
Trigger: CCACACCTTCTGCGTGGAACACAACGCCTTCGGGCGGATCCTGCAGCATGAACTGAAACCCAATGGCAGAAATGTGCCAGTCACAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp ATCAGGGTTTCGAAGCCGCTGTGCCTGAAGTCTTTGATCTTGACTTaGGGACTCCACGAACCTGCAATTCCCTCCTCCAGCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: IRVSKPLCLKSLILT*GLHEPAIPSSSSST
Trigger: GGTGCTGCTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAAACCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGACC +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWFSQCR*SGTAQT
Trigger: GGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGTGCAGTGCCACCGACAGGGAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTCTGTGCCTGAAGTCTTaGATCTTGACTTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: ECSATDREACLERVNRSSLCLKS*ILTWGL
Trigger: GAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAG...AGAGCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTCGGTGGCACTGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGAT +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTAGLLE*ALVIHD
Trigger: ATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGATCCGCCCGAAGGCGTaGTGTTCCACGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTIRPKA*CSTQKV
Trigger: CACCTTCTGCGTGGAACACAACGCCTTCGGGCGGAT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGCAAAGCCTTGAAGCCTaGGAGCGGGACTCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTQSLEA*ERDSRG
Trigger: TCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTTG...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGAACCTTGCAAAGCCTaGAAGCCTTGGAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGEPCKA*KPWSGT
Trigger: AGTCCCGCTCCAAGGCTTCAAGGCTTTGCAAGGTTC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGACGCGCCTGTAGAACCTaGCAAAGCCTTGAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGRACRT*QSLEAL
Trigger: CAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGCG...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACCGCGCCTGTAGAACCTaGCAAAGCCTTGAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDRACRT*QSLEAL
Trigger: CAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGCG...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATGGGCCTTCGGAAGGTaGTCTGTGTTCGCGTCTATC +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGWAFGR*SVFASI
Trigger: GATAGACGCGAACACAGACAACCTTCCGAAGGCCCA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWTEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp GCCCGGAGTCTTCATACACCGTTCCTTCATTTTCTAACAGTCCTCTaGAGTCCACCACCGAGCCGCCGGTTCCTATTCTGTCTCGTGTCT +
Preference number: 5 (lower is better)
Translates to: ARSLHTPFLHFLTVL*SPPPSRRFLFCLVS
Trigger: AGACACGAGACAGAATAGGAACCGGCGGCTCGGTGGTGGACTGCAGAGGACTGTTAGAAAATGAAGGAACGGTGTATGAAGACTCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS GCA 90 bp GCTGTGCCTGAAGTCTTTGATCTTGACTTGGGGACTCCACGAACCTaGAATTCCCTCCTCCAGCAGCAGCACCGGTGCTATCTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: AVPEVFDLDLGTPRT*NSLLQQQHRCYLCK
Trigger: CTTACACAGATAGCACCGGTGCTGCTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS GCA 90 bp TTCTCCTCTGTGACTGGCACATTTCTGCCATTGGGTTTCAGTTCATaGTGCAGGATCCGCCCGAAGGCGTTGTGTTCCACGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FSSVTGTFLPLGFSS*CRIRPKALCSTQKV
Trigger: CACCTTCTGCGTGGAACACAACGCCTTCGGGCGGATCCTGCAGCATGAACTGAAACCCAATGGCAGAAATGTGCCAGTCACAGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp TGCTTTTGGTCTGGTGGCCATGAGCTAGACTCTGTTGCCTTTGGTTaGTTTTCACTCCACAGCAAACCCGCAGGTCTCCTCCACGGCTGT +
Preference number: 5 (lower is better)
Translates to: CFWSGGHELDSVAFG*FSLHSKPAGLLHGC
Trigger: ACAGCCGTGGAGGAGACCTGCGGGTTTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGAGTCTAGCTCATGGCCACCAGACCAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp TGTCTGAGGACTTTCAGCTTCTGGACTAGATCTCTTTCGTATCTCTaGGCAGGAAGCTCCTCGTCCTCCAGAGAGCCCTCACTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: CLRTFSFWTRSLSYL*AGSSSSSREPSLGS
Trigger: ACTGCCCAGTGAGGGCTCTCTGGAGGACGAGGAGCTTCCTGCCCAGAGATACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCTCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGTTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGACC +
Preference number: 5 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRFSQCR*SGTAQT
Trigger: GGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCTGTGCCTGAAGTCTTaGATCTTGACTTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTLCLKS*ILTWGL
Trigger: GAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCCTTGGCCCTGGACTGTaGTTCTTTGTTCGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTLGPGL*FFVRSL
Trigger: AAGGCTACGAACAAAGAACAACAGTCCAGGGCCAAG...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCTGGTCCCCGAGGGACTaGGTATCCTGGGGTCGTGCC +
Preference number: 5 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTWSPRD*VSWGRA
Trigger: GGCACGACCCCAGGATACCAAGTCCCTCGGGGACCA...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCATGGTCCCCGAGGGACTaGGTATCCTGGGGTCGTGCC +
Preference number: 5 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSWSPRD*VSWGRA
Trigger: GGCACGACCCCAGGATACCAAGTCCCTCGGGGACCA...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCGGCACATTTCTGCCATaGGGTTTCAGTTCATGCTGC +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTGTFLP*GFSSCC
Trigger: GCAGCATGAACTGAAACCCAATGGCAGAAATGTGCC...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp AGTACAGGCGTGATGTCGTTCTCTAGGATCCACACCAAGCTCTTATaGAGCTCTGGGTCCACAGATTCCAGATCTGAGAGCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: STGVMSFSRIHTKLL*SSGSTDSRSESWMG
Trigger: GCCCATCCAGCTCTCAGATCTGGAATCTGTGGACCCAGAGCTGCATAAGAGCTTGGTGTGGATCCTAGAGAACGACATCACGCCTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTTVRRI*MLEPFL
Trigger: CAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGT...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGCGGCAATGACCAGCTaGGGGCTGCTGAAGCGACAG +
Preference number: 5 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFAAMTS*GLLKRQ
Trigger: CTGTCGCTTCAGCAGCCCCAAGCTGGTCATTGCCGC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGGCACATTTCTGCCATaGGGTTTCAGTTCATGCTGC +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGGTFLP*GFSSCC
Trigger: GCAGCATGAACTGAAACCCAATGGCAGAAATGTGCC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 5 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGATCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 5 (lower is better)
Translates to: EACLERVNRSSGKVCDTHSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGACAGGGAGGCCTGTTaGGAAAGAGTGAACCGGAGC +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKDREAC*ERVNRS
Trigger: GCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGACAGGGAGGCCTGTTaGGAAAGAGTGAACCGGAGC +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFDREAC*ERVNRS
Trigger: GCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCATTTGCTTTGCCATGTaGAGTTCTTTGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRICFAM*SSLGWF
Trigger: GAACCACCCCAAAGAACTCAACATGGCAAAGCAAAT...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS TCA 90 bp GTTTGCATAGATCCAAACGCTGGTATCCGGTATCTTTTAATCTGCTaGTGGCATTGGAGAGCAGCCGCACACAGCCCAGGAAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: VCIDPNAGIRYLLIC*WHWRAAAHSPGSQL
Trigger: GAGCTGGCTTCCTGGGCTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATTAAAAGATACCGGATACCAGCGTTTGGATCTATGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS GCA 90 bp CACTTTGGGTCCAATGTGTTTTTCACAGTGTCGGTTGAGTGGCACTaGCCAGACCCATCCACGACAATCTTTGCAAAAGGGTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: HFGSNVFFTVSVEWH*PDPSTTIFAKGSGS
Trigger: GCTCCCTGACCCTTTTGCAAAGATTGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAAACACATTGGACCCAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CCA 90 bp TATCCTCCCAGAAACTGTACTTCTGACTTCCCAGCCTGGCGGCAGTaGTCCAAGTTCATCACAGTTCACACTGTTAAGGTCTCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: YPPRNCTSDFPAWRQ*SKFITVHTVKVSGL
Trigger: GAGCCCAGAGACCTTAACAGTGTGAACTGTGATGAACTTGGACCACTGCCGCCAGGCTGGGAAGTCAGAAGTACAGTTTCTGGGAGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS CCA 90 bp CACGGCTGTCAGCAGCTTCTCGTAGAGCTTCTCATAGGACTCATATaGTGGAATGTCGATCCGGTTAAAGCAGGTATGGGCCTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: HGCQQLLVELLIGLI*WNVDPVKAGMGLRK
Trigger: CTTCCGAAGGCCCATACCTGCTTTAACCGGATCGACATTCCACCATATGAGTCCTATGAGAAGCTCTACGAGAAGCTGCTGACAGCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTG +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFTVRRI*MLEPFL
Trigger: CAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGT...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACGACAAGTGGTCGGGGTaGATTGAAGAATCCGGATTT +
Preference number: 5 (lower is better)
Translates to: EACLERVNRSSGKVCDTHDKWSG*IEESGF
Trigger: AAATCCGGATTCTTCAATCAACCCCGACCACTTGTC...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGATCCGCCCGAAGGCGTaGTGTTCCACGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWIRPKA*CSTQKV
Trigger: CACCTTCTGCGTGGAACACAACGCCTTCGGGCGGAT...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACAGGCTTCAGCAGATGTaGAGGGATGAGCTCATTGAA +
Preference number: 5 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDRLQQM*RDELIE
Trigger: TTCAATGAGCTCATCCCTCAACATCTGCTGAAGCCT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGAACCACCGCACGATGTaGCTGTCGGCCACACAGTGC +
Preference number: 5 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWNHRTM*LSATQC
Trigger: GCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTT...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGAACGTCTCCACCGCTaGCCAGAACCACCGCACGAT +
Preference number: 5 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTERLHR*PEPPHD
Trigger: ATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTTC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCTCTGTTGCCTTTGGTaGCTTTTCACTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: EACLERVNRSSGKVCDTHLCCLW*LFTPQQ
Trigger: TTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGAG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGGGCCTCTGCCAGCTTaGCAGGAGGTGCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFGPLPA*QEVHRS
Trigger: GCTTCTGTGCACCTCCTGCAAAGCTGGCAGAGGCCC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GATGTGCCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: DVPTCGGKAELFKEAKPTKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...GGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGGCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGACAGGGAGGCCTGTTaGGAAAGAGTGAACCGGAGC +
Preference number: 5 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHDREAC*ERVNRS
Trigger: GCTCCGGTTCACTCTTTCCAAACAGGCCTCCCTGTC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCTCTGACCTCATCCCGGAGGCCGCTTCAGTTCTCGAATGGATGTCTCTTCCGCGGAAGCTTTTACCATTaGCTTTGCCATGTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: PLTSSRRPLQFSNGCLFRGSFYH*LCHVEF
Trigger: GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCC...GCGGAAGAGACATCCATTCGAGAACTGAAGCGGCCTCCGGGATGAGGTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS TCA 90 bp TTGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATaGGCTAGACTCTGTTGCCTTTGGTTGCTTTTCACTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: LQEVHRSWMLLVWWP*ARLCCLWLLFTPQQ
Trigger: TTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGAGTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp GGCTGTCAGCAGCTTCTCGTAGAGCTTCTCATAGGACTCATATGGTaGAATGTCGATCCGGTTAAAGCAGGTATGGGCCTTCGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GCQQLLVELLIGLIW*NVDPVKAGMGLRKV
Trigger: AACCTTCCGAAGGCCCATACCTGCTTTAACCGGATCGACATTCCACCATATGAGTCCTATGAGAAGCTCTACGAGAAGCTGCTGACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCATCCACGACAATCTTaGCAAAAGGGTCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFHPRQS*QKGQGA
Trigger: GGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGATG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGAGTGCTGGTTCCACTTaGGGTCCAATGTGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWSAGST*GPMCFS
Trigger: TGAAAAACACATTGGACCCAAAGTGGAACCAGCACT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCCTTGGCCCTGGACTGTaGTTCTTTGTTCGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTLGPGL*FFVRSL
Trigger: AAGGCTACGAACAAAGAACAACAGTCCAGGGCCAAG...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGAT +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFAGLLE*ALVIHD
Trigger: ATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAATCCGCCCGAAGGCGTaGTGTTCCACGCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTIRPKA*CSTQKV
Trigger: CACCTTCTGCGTGGAACACAACGCCTTCGGGCGGAT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACTTATCACCACATGGGTaGCAACACAGCAGAATATCC +
Preference number: 5 (lower is better)
Translates to: EACLERVNRSSGKVCDTHLSPHG*QHSRIS
Trigger: GGATATTCTGCTGTGTTGCAACCCATGTGGTGATAA...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKITEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTCTGCTGTCACAGGTTaGCGTCCACACCCTACTTTT +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSAVTG*RPHPTF
Trigger: AAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAGA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGTTCTCTTTTCAGAACTaGAGAGAGCCCTTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWFSFQN*REPFSG
Trigger: ACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGAA...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS TCA 90 bp GAGAGCAGCCGCACACAGCCCAGGAAGCCAGCTCCCTGTTTCTTGTaGATTTTCTTATGGTTCCACACGCTAATGGTTATCGAATCCGTT +
Preference number: 5 (lower is better)
Translates to: ESSRTQPRKPAPCFL*IFLWFHTLMVIESV
Trigger: AACGGATTCGATAACCATTAGCGTGTGGAACCATAAGAAAATTCACAAGAAACAGGGAGCTGGCTTCCTGGGCTGTGTGCGGCTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGACC +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWFSQCR*SGTAQT
Trigger: GGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG +
Preference number: 5 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSNLLMA*ESSRTQ
Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCTCTGAGGGGTTTAGTTaGCATAGATCCAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTSEGFS*HRSKRW
Trigger: CCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGA...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGTCTGAGGGGTTTAGTTaGCATAGATCCAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTSEGFS*HRSKRW
Trigger: CCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGA...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACTTGGCCCTGGACTGTaGTTCTTTGTTCGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKLGPGL*FFVRSL
Trigger: AAGGCTACGAACAAAGAACAACAGTCCAGGGCCAAG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGCAGGAGGTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATGAGCTAGACATGCAAAAAGTAAACTaGGCCCTGGACTGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: CRRCTEAGCFWSGGHELDMQKVN*ALDCCS
Trigger: AGAACAACAGTCCAGGGCCAAGTTTACTTTTTGCAT...GTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCACCTCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCACCTGTGGGGGCAAGGCAGAACTTTTCAAAGAGGCTAAGCCCACCATTTGGATGCAAAAAGTAAACTaGGCCCTGGACTGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: PTCGGKAELFKEAKPTIWMQKVN*ALDCCS
Trigger: AGAACAACAGTCCAGGGCCAAGTTTACTTTTTGCAT...CCAAATGGTGGGCTTAGCCTCTTTGAAAAGTTCTGCCTTGCCCCCACAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGGAACCTTGCAAAGCCTaGAAGCCTTGGAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWEPCKA*KPWSGT
Trigger: AGTCCCGCTCCAAGGCTTCAAGGCTTTGCAAGGTTC...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCGCGCCTGTAGAACCTaGCAAAGCCTTGAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWRACRT*QSLEAL
Trigger: CAAGGCTTCAAGGCTTTGCAAGGTTCTACAGGCGCG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTGGGCCTTCGGAAGGTaGTCTGTGTTCGCGTCTATC +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWWAFGR*SVFASI
Trigger: GATAGACGCGAACACAGACAACCTTCCGAAGGCCCA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAATTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTACAGAGGTCACAGCTTaGGGACTGACTGGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFTEVTA*GLTGWL
Trigger: GAGCCAACCAGTCAGTCCCAAAGCTGTGACCTCTGT...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GACACTCACACAACCGATGACAAGGCGGCAAACCCACACGCAGGTAGAAGTGGAGGAAGCTTTTACCATTaGCTTTGCCATGTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: DTHTTDDKAANPHAGRSGGSFYH*LCHVEF
Trigger: GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCC...TCCACTTCTACCTGCGTGTGGGTTTGCCGCCTTGTCATCGGTTGTGTGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GAGGCCTGTTTGGAAAGAGTGAACCGGAGCTCTGGAAAGGTCTGCGACACTCACCACCTTAATCTGAATTaGGACCATACGTCCGAACAA +
Preference number: 5 (lower is better)
Translates to: EACLERVNRSSGKVCDTHHLNLN*DHTSEQ
Trigger: TTGTTCGGACGTATGGTCCAAATTCAGATTAAGGTG...GTGAGTGTCGCAGACCTTTCCAGAGCTCCGGTTCACTCTTTCCAAACAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp TATCCTCCCAGAAACTGTACTTCTGACTTCCCAGCCTGGCGGCAGTaGTCCAAGTTCATCACAGTTCACACTGTTAAGGTCTCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: YPPRNCTSDFPAWRQ*SKFITVHTVKVSWY
Trigger: ATACCAAGAGACCTTAACAGTGTGAACTGTGATGAACTTGGACCACTGCCGCCAGGCTGGGAAGTCAGAAGTACAGTTTCTGGGAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361368.7
ENST00000638461.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGACC +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTFSQCR*SGTAQT
Trigger: GGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCAGTCTTTGATCTTGACTaGGGGACTCCACGAACCTGC +
Preference number: 5 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAVFDLD*GTPRTC
Trigger: GCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGAC...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGTCTTTGATCTTGACTaGGGGACTCCACGAACCTGC +
Preference number: 5 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSVFDLD*GTPRTC
Trigger: GCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGAC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAACTGAAGTCTTTGATCTaGACTTGGGGACTCCACGAA +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKLKSLI*TWGLHE
Trigger: TTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAG...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCTGAAGTCTTTGATCTaGACTTGGGGACTCCACGAA +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLKSLI*TWGLHE
Trigger: TTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGAACCTTGCAAAGCCTaGAAGCCTTGGAGCGGGACT +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFEPCKA*KPWSGT
Trigger: AGTCCCGCTCCAAGGCTTCAAGGCTTTGCAAGGTTC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCTGGGCCTTCGGAAGGTaGTCTGTGTTCGCGTCTATC +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFWAFGR*SVFASI
Trigger: GATAGACGCGAACACAGACAACCTTCCGAAGGCCCA...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACATGGGCCTTCGGAAGGTaGTCTGTGTTCGCGTCTATC +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTWAFGR*SVFASI
Trigger: GATAGACGCGAACACAGACAACCTTCCGAAGGCCCA...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCCTCTGTTGCCTTTGGTaGCTTTTCACTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLCCLW*LFTPQQ
Trigger: TTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGAG...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCTTATCACCACATGGGTaGCAACACAGCAGAATATCC +
Preference number: 5 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTLSPHG*QHSRIS
Trigger: GGATATTCTGCTGTGTTGCAACCCATGTGGTGATAA...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGCCTCAAGGCTGTTTTGAGATGGAATAGCTGGCATAGCCACCAGTTCCAAACCGAACAGATAAAACCATaGTCCACAAGGTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GLKAVLRWNSWHSHQFQTEQIKP*STRSFP
Trigger: TGGGAAGGACCTTGTGGACAATGGTTTTATCTGTTC...GGTTTGGAACTGGTGGCTATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCTTCAAGAGGAAGATGATGCAAGGAAAGGCTGGATACAGCCACTGGGGAACGATTTGCTTTGCCATGTaGAGTTCTTTGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: TFKRKMMQGKAGYSHWGTICFAM*SSLGWF
Trigger: GAACCACCCCAAAGAACTCAACATGGCAAAGCAAAT...CGTTCCCCAGTGGCTGTATCCAGCCTTTCCTTGCATCATCTTCCTCTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CAAACCATCGTAGAAACTGAAGGTTCTAGGAGTGCAGTGCCACCGACAGGGAGGGGAAGCTTTTACCATTaGCTTTGCCATGTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: QTIVETEGSRSAVPPTGRGSFYH*LCHVEF
Trigger: GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCC...CCTCCCTGTCGGTGGCACTGCACTCCTAGAACCTTCAGTTTCTACGATGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 90 bp GGTTCTTGGCACATAACACTGGAAGCCCCACTCAGCAGCAGCTTTTaGAGTCTGTGGCTTAATTTAAGGAAGTATTCCACGAAACCTCTG +
Preference number: 5 (lower is better)
Translates to: GSWHITLEAPLSSSF*SLWLNLRKYSTKPL
Trigger: CAGAGGTTTCGTGGAATACTTCCTTAAATTAAGCCACAGACTGCAAAAGCTGCTGCTGAGTGGGGCTTCCAGTGTTATGTGCCAAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472627.1
ENST00000639855.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACACATCCACGACAATCTTaGCAAAAGGGTCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTHPRQS*QKGQGA
Trigger: GGCTCCCTGACCCTTTTGCAAAGATTGTCGTGGATG...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGTCTTTGATCTTGACTaGGGGACTCCACGAACCTGC +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFVFDLD*GTPRTC
Trigger: GCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGAC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCTGTGCCTGAAGTCTTaGATCTTGACTTGGGGACTC +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWLCLKS*ILTWGL
Trigger: GAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCCAAAGCCTTGAAGCCTaGGAGCGGGACTCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSQSLEA*ERDSRG
Trigger: TCCACGCGAGTCCCGCTCCAAGGCTTCAAGGCTTTG...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACTCTGTTGCCTTTGGTaGCTTTTCACTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKILCCLW*LFTPQQ
Trigger: TTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGAG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTTATCACCACATGGGTaGCAACACAGCAGAATATCC +
Preference number: 5 (lower is better)
Translates to: WNGGLNFPPAANLIWQPFLSPHG*QHSRIS
Trigger: GGATATTCTGCTGTGTTGCAACCCATGTGGTGATAA...GAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAAAGGGGAAACACATTTaGACTCAAGCTTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKKGKHI*TQASCC
Trigger: ACAGCAGGAAGCTTGAGTCAAAATGTGTTTCCCCTT...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTTTTGGGACTGACTGGTaGGCTCTAGGGCTGATTTTG +
Preference number: 5 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFFGTDW*ALGLIL
Trigger: CAAAATCAGCCCTAGAGCCAACCAGTCAGTCCCAAA...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGAACAGATAAAACCATaGTCCACAAGGTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKEQIKP*STRSFP
Trigger: TGGGAAGGACCTTGTGGACAATGGTTTTATCTGTTC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCATATGAAGACATCTGGGCAAGTGAACCGAGTAGCAATCGTTAGTGTCACCGCCATGTTGAGTTCTTaGGGGTGGTTCAAAAGGACC +
Preference number: 5 (lower is better)
Translates to: HHMKTSGQVNRVAIVSVTAMLSS*GWFKRT
Trigger: GGTCCTTTTGAACCACCCCAAAGAACTCAACATGGC...GGTGACACTAACGATTGCTACTCGGTTCACTTGCCCAGATGTCTTCATATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TGGCCTGGACTTTTGGAATGGGGGATTAAACTTTCCTCCTGCAGCAAACCTCATAGTGCTGGTTCCACTTaGGGTCCAATGTGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: WPGLLEWGIKLSSCSKPHSAGST*GPMCFS
Trigger: TGAAAAACACATTGGACCCAAAGTGGAACCAGCACT...ATGAGGTTTGCTGCAGGAGGAAAGTTTAATCCCCCATTCCAAAAGTCCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAATCTGCTGATGGCATaGGAGAGCAGCCGCACACAG +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTNLLMA*ESSRTQ
Trigger: CTGTGTGCGGCTGCTCTCCAATGCCATCAGCAGATT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGTCTGAGGGGTTTAGTTaGCATAGATCCAAACGCTGG +
Preference number: 5 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWSEGFS*HRSKRW
Trigger: CCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGA...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACACTTGGCCCTGGACTGTaGTTCTTTGTTCGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTLGPGL*FFVRSL
Trigger: AAGGCTACGAACAAAGAACAACAGTCCAGGGCCAAG...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGGACAAGTGGTCGGGGTaGATTGAAGAATCCGGATTT +
Preference number: 5 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWDKWSG*IEESGF
Trigger: AAATCCGGATTCTTCAATCAACCCCGACCACTTGTC...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTAGGCTTCAGCAGATGTaGAGGGATGAGCTCATTGAA +
Preference number: 5 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFRLQQM*RDELIE
Trigger: TTCAATGAGCTCATCCCTCAACATCTGCTGAAGCCT...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCACTCTGTTGCCTTTGGTaGCTTTTCACTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSLCCLW*LFTPQQ
Trigger: TTGCTGTGGAGTGAAAAGCAACCAAAGGCAACAGAG...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGGCCTCAAGGCTGTTTaGAGATGGAATAGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFGLKAV*RWNSWH
Trigger: ATGCCAGCTATTCCATCTCAAAACAGCCTTGAGGCC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 90 bp CACATAACACTGGAAGCCCCACTCAGCAGCAGCTTTTGCAGTCTGTaGCTTAATTTAAGGAAGTATTCCACGAAACCTCTGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: HITLEAPLSSSFCSL*LNLRKYSTKPLKRI
Trigger: GATTCTCTTCAGAGGTTTCGTGGAATACTTCCTTAAATTAAGCCACAGACTGCAAAAGCTGCTGCTGAGTGGGGCTTCCAGTGTTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472627.1
ENST00000639855.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGAGTGCTGGTTCCACTTaGGGTCCAATGTGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWSAGST*GPMCFS
Trigger: TGAAAAACACATTGGACCCAAAGTGGAACCAGCACT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCCTGAAGTCTTTGATCTaGACTTGGGGACTCCACGAA +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFLKSLI*TWGLHE
Trigger: TTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAG...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAAGGCTTCAGCAGATGTaGAGGGATGAGCTCATTGAA +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTRLQQM*RDELIE
Trigger: TTCAATGAGCTCATCCCTCAACATCTGCTGAAGCCT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGTTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 5 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GGGTGGGAGTACTATGGTAAAGGAGGGATATATGGGTGGGAGCCACCAACAAAAGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: GWEYYGKGGIYGWEPPTKVILSP*LLSEFT
Trigger: TGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAAC...TTTTGTTGGTGGCTCCCACCCATATATCCCTCCTTTACCATAGTACTCCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACTTTCCTCCTGCAGCAAACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGAACAGATAAAACCATaGTCCACAAGGTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: NFPPAANLIWQPFYSRTSEQIKP*STRSFP
Trigger: TGGGAAGGACCTTGTGGACAATGGTTTTATCTGTTC...TGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTTTGCTGCAGGAGGAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGATTTGCTTTGCCATGTaGAGTTCTTTGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWICFAM*SSLGWF
Trigger: GAACCACCCCAAAGAACTCAACATGGCAAAGCAAAT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATAGGAAGCTTTTACCATTaGCTTTGCCATGTTGAGTTC +
Preference number: 5 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIGSFYH*LCHVEF
Trigger: GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCC...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAGTTCACACCAAGCCAGCATTCTCTTTTCAGAACTaGAGAGAGCCCTTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: HRGYPFTIAFKRVHTKPAFSFQN*REPFSG
Trigger: ACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGAA...TGCTGGCTTGGTGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAACCTCGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGTTCTCTTTTCAGAACTaGAGAGAGCCCTTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWFSFQN*REPFSG
Trigger: ACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGAA...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ACCCAGAACCGGCTGCTGGGATGTGAAATCTGGAATCTGAGCTCTGATAAGATACACCTTAATCTGAATTaGGACCATACGTCCGAACAA +
Preference number: 5 (lower is better)
Translates to: TQNRLLGCEIWNLSSDKIHLNLN*DHTSEQ
Trigger: TTGTTCGGACGTATGGTCCAAATTCAGATTAAGGTG...TATCTTATCAGAGCTCAGATTCCAGATTTCACATCCCAGCAGCCGGTTCTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCAGTGCTGGTTCCACTTaGGGTCCAATGTGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFSAGST*GPMCFS
Trigger: TGAAAAACACATTGGACCCAAAGTGGAACCAGCACT...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGCTGGGCTCCTTGAGTaGGCACTGGTGATTCATGAT +
Preference number: 5 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSAGLLE*ALVIHD
Trigger: ATCATGAATCACCAGTGCCAACTCAAGGAGCCCAGC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGGCACATTTCTGCCATaGGGTTTCAGTTCATGCTGC +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTGTFLP*GFSSCC
Trigger: GCAGCATGAACTGAAACCCAATGGCAGAAATGTGCC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGATTTGGCCTGGACTTTaGGAATGGGGGATTAAACTT +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWIWPGL*EWGIKL
Trigger: AAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAAT...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGCCATGTTGAGTTCTTaGGGGTGGTTCAAAAGGACC +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTAMLSS*GWFKRT
Trigger: GGTCCTTTTGAACCACCCCAAAGAACTCAACATGGC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AGAAACCACATAGGAACATTGGCCTGCTGTTTTCTGCCCAAGTTCAGCTATTGGCACCTTAATCTGAATTaGGACCATACGTCCGAACAA +
Preference number: 5 (lower is better)
Translates to: RNHIGTLACCFLPKFSYWHLNLN*DHTSEQ
Trigger: TTGTTCGGACGTATGGTCCAAATTCAGATTAAGGTG...CCAATAGCTGAACTTGGGCAGAAAACAGCAGGCCAATGTTCCTATGTGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CTGCTGTCACAGGTTTGCGTCCACACCCTACTTTTTGTAGAACAGTATCTTTGGCACCTTAATCTGAATTaGGACCATACGTCCGAACAA +
Preference number: 5 (lower is better)
Translates to: LLSQVCVHTLLFVEQYLWHLNLN*DHTSEQ
Trigger: TTGTTCGGACGTATGGTCCAAATTCAGATTAAGGTG...CCAAAGATACTGTTCTACAAAAAGTAGGGTGTGGACGCAAACCTGTGACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGACAAGTGGTCGGGGTaGATTGAAGAATCCGGATTT +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTDKWSG*IEESGF
Trigger: AAATCCGGATTCTTCAATCAACCCCGACCACTTGTC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTAGGCTTCAGCAGATGTaGAGGGATGAGCTCATTGAA +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTRLQQM*RDELIE
Trigger: TTCAATGAGCTCATCCCTCAACATCTGCTGAAGCCT...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp GCTCTAGGGCTGATTTTGGTCTGCTCTTTCCTACACTCCATGACATGGTGTTTTGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: ALGLILVCSFLHSMTWCFVILSP*LLSEFT
Trigger: TGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAAC...AAAACACCATGTCATGGAGTGTAGGAAAGAGCAGACCAAAATCAGCCCTAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp AACCTCATTTGGCAGCCCTTCTATTCTAGAACCTCAGCAGCCCAGAAATTAACAATTTGGCCTGGACTTTaGGAATGGGGGATTAAACTT +
Preference number: 5 (lower is better)
Translates to: NLIWQPFYSRTSAAQKLTIWPGL*EWGIKL
Trigger: AAGTTTAATCCCCCATTCCAAAAGTCCAGGCCAAAT...TGTTAATTTCTGGGCTGCTGAGGTTCTAGAATAGAAGGGCTGCCAAATGAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp CCCAAAGTAGAACAGTCGGGAAGCTTTTACCATTTGCTTTGCCATGTTGAGTTCGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: PKVEQSGSFYHLLCHVEFVILSP*LLSEFT
Trigger: TGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAAC...GAACTCAACATGGCAAAGCAAATGGTAAAAGCTTCCCGACTGTTCTACTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTTTCTCTTTTCAGAACTaGAGAGAGCCCTTTTCCGGT +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTFSFQN*REPFSG
Trigger: ACCGGAAAAGGGCTCTCTCAAGTTCTGAAAAGAGAA...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCTTTTCCAGTTGGAAATaGATCTGCTACCCAGAACCG +
Preference number: 5 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSFSSWK*ICYPEP
Trigger: CGGTTCTGGGTAGCAGATCAATTTCCAACTGGAAAA...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCGAACAGATAAAACCATaGTCCACAAGGTCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSEQIKP*STRSFP
Trigger: TGGGAAGGACCTTGTGGACAATGGTTTTATCTGTTC...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCATTTGCTTTGCCATGTaGAGTTCTTTGGGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSICFAM*SSLGWF
Trigger: GAACCACCCCAAAGAACTCAACATGGCAAAGCAAAT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp ATCTTTGGGTGGATTTACATCATCGAGGTTATCCTTTCACCATTGCTTTTAAGCATGCAAAAAGTAAACTaGGCCCTGGACTGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: IFGWIYIIEVILSPLLLSMQKVN*ALDCCS
Trigger: AGAACAACAGTCCAGGGCCAAGTTTACTTTTTGCAT...GCTTAAAAGCAATGGTGAAAGGATAACCTCGATGATGTAAATCCACCCAAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS-3UTR CAA 90 bp TTCCTGCTTCAAAGTCTTTTAAACCATGAGACCCTGGTTTCCTTCCTAGTTACTGTTATCCTTTCACCATaGCTTTTAAGCGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: FLLQSLLNHETLVSFLVTVILSP*LLSEFT
Trigger: TGTGAACTCGCTTAAAAGCAATGGTGAAAGGATAAC...AGTAACTAGGAAGGAAACCAGGGTCTCATGGTTTAAAAGACTTTGAAGCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 72 bp CCCCGCCGCCGCCGCCTCAAGGTTACGGCTCCGGGCTaGGCGCCGGGGTCCGAGCCGGGACACAAACTCCGC +
Preference number: 6 (lower is better)
Translates to: PRRRRLKVTAPG*APGSEPGHKLR
Trigger: GCGGAGTTTGTGTCCCGGCTCGGACCCCGGCGCCCAGCCCGGAGCCGTAACCTTGAGGCGGCGGCGGCGGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS GCA 72 bp GGAGATCGGCGCTTGCTGCGGCGCTCTGACCCTCGCTaGTTCCAGCCGAGCCCAGTCCCGAGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GDRRLLRRSDPR*FQPSPVPSRRR
Trigger: GCGGCGGCGGCTCGGGACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638647.1
CDS CCA 72 bp AAACTCCGCGGCCCAGGCGTCCGGGCGGCAGGCGGATaGTCGAGCCGGGAGATCGGCGCTTGCTGCGGCGCT +
Preference number: 6 (lower is better)
Translates to: KLRGPGVRAAGG*SSREIGACCGA
Trigger: AGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCGGACGCCTGGGCCGCGGAGTTT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS CAA 90 bp AGGCGTCCGGGCGGCAGGCGGATGGTCGAGCCGGGAGATCGGCGCTaGCTGCGGCGCTCTGACCCTCGCTGCTTCCAGCCGAGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: RRPGGRRMVEPGDRR*LRRSDPRCFQPSPV
Trigger: GACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGCCGCCCGGACGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS TCA 72 bp GGTCGAGCCGGGAGATCGGCGCTTGCTGCGGCGCTCTaGCCCTCGCTGCTTCCAGCCGAGCCCAGTCCCGAG +
Preference number: 6 (lower is better)
Translates to: GRAGRSALAAAL*PSLLPAEPSPE
Trigger: CTCGGGACTGGGCTCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS GCA 72 bp GCAGGCGGATGGTCGAGCCGGGAGATCGGCGCTTGCTaGGGCGCTCTGACCCTCGCTGCTTCCAGCCGAGCC +
Preference number: 6 (lower is better)
Translates to: AGGWSSREIGAC*GALTLAASSRA
Trigger: GGCTCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS GCA 72 bp GCGGCAGGCGGATGGTCGAGCCGGGAGATCGGCGCTTaGTGCGGCGCTCTGACCCTCGCTGCTTCCAGCCGA +
Preference number: 6 (lower is better)
Translates to: AAGGWSSREIGA*CGALTLAASSR
Trigger: TCGGCTGGAAGCAGCGAGGGTCAGAGCGCCGCAGCAAGCGCCGATCTCCCGGCTCGACCATCCGCCTGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000638461.1
ENST00000638647.1
ENST00000639855.1
CDS GCA 72 bp ACGTCTCCACCGCTTGCCAGAACCACCGCACGATGTTaGTGTCGGCCACACAGTGCTTCAGCCGCGTGTTCG +
Preference number: 6 (lower is better)
Translates to: TSPPLARTTARC*CRPHSASAACS
Trigger: CGAACACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 72 bp CGCGTCTATCAGGTGGATGGTGAACAGCCGGGGCCCTaGCGCGCCTGTAGAACCTTGCAAAGCCTTGAAGCC +
Preference number: 6 (lower is better)
Translates to: RVYQVDGEQPGP*RACRTLQSLEA
Trigger: GGCTTCAAGGCTTTGCAAGGTTCTACAGGCGCGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 72 bp TCCAGCAGCAGCACCGGTGCTATCTGTGTAAGGGGCTaGTTCCTCCATGAAGCAGCTGAGCGGCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSSTGAICVRG*FLHEAAERPPR
Trigger: CCTGGGAGGCCGCTCAGCTGCTTCATGGAGGAACCAGCCCCTTACACAGATAGCACCGGTGCTGCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS CCA 72 bp GGCAGTTCCGGGGACTGGTGGCCGTGTGGTCGGTTCTaGGGCGTCTGTAGTGAACCTCGCACATCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: GSSGDWWPCGRF*GVCSEPRTSGF
Trigger: AAACCCTGATGTGCGAGGTTCACTACAGACGCCCCAGAACCGACCACACGGCCACCAGTCCCCGGAACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS CCA 72 bp GCCTTCGGAAGGTTGTCTGTGTTCGCGTCTATCAGGTaGATGGTGAACAGCCGGGGCCCTGCCGCGCCTGTA +
Preference number: 6 (lower is better)
Translates to: AFGRLSVFASIR*MVNSRGPAAPV
Trigger: TACAGGCGCGGCAGGGCCCCGGCTGTTCACCATCCACCTGATAGACGCGAACACAGACAACCTTCCGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 72 bp TTCTTGGCACATAACACTGGGGCAGGGGTCCGGGAGTaGAGAAGGATGGCGCAGGGAGGATCCCAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: FLAHNTGAGVRE*RRMAQGGSQAW
Trigger: CCAAGCCTGGGATCCTCCCTGCGCCATCCTTCTCCACTCCCGGACCCCTGCCCCAGTGTTATGTGCCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480055.5
ENST00000639228.1
CDS GCA 72 bp CCTTGGAGCGGGACTCGCGTGGACCCAGTCACAAACTaGAGGAGCCTGGCCCTCCTTTCTTCATCGAACGTC +
Preference number: 6 (lower is better)
Translates to: PWSGTRVDPVTN*RSLALLSSSNV
Trigger: GACGTTCGATGAAGAAAGGAGGGCCAGGCTCCTGCAGTTTGTGACTGGGTCCACGCGAGTCCCGCTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 90 bp TCTTCATCGAACGTCTCCACCGCTTGCCAGAACCACCGCACGATGTaGCTGTCGGCCACACAGTGCTTCAGCCGCGTGTTCGACTTCCAG +
Preference number: 6 (lower is better)
Translates to: SSSNVSTACQNHRTM*LSATQCFSRVFDFQ
Trigger: CTGGAAGTCGAACACGCGGCTGAAGCACTGTGTGGCCGACAGCAACATCGTGCGGTGGTTCTGGCAAGCGGTGGAGACGTTCGATGAAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS TCA 72 bp CAAGGTTCTTGGCACATAACACTGTCAGACGGATCTTaGTGCTGGAGCCGTTCCTGCGTGTCCCGGGGTTCG +
Preference number: 6 (lower is better)
Translates to: QGSWHITLSDGS*CWSRSCVSRGS
Trigger: CGAACCCCGGGACACGCAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGTGTTATGTGCCAAGAACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 72 bp ATCCGCCCGAAGGCGTTGTGTTCCACGCAGAAGGTGTaGTCCAGTACAGGCGTGATGTCGTTCTCTAGGATC +
Preference number: 6 (lower is better)
Translates to: IRPKALCSTQKV*SSTGVMSFSRI
Trigger: GATCCTAGAGAACGACATCACGCCTGTACTGGACCACACCTTCTGCGTGGAACACAACGCCTTCGGGCGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 72 bp GCAAGGTTCTTGGCACATAACACTGTCAGACGGATCTaGATGCTGGAGCCGTTCCTGCGTGTCCCGGGGTTC +
Preference number: 6 (lower is better)
Translates to: ARFLAHNTVRRI*MLEPFLRVPGF
Trigger: GAACCCCGGGACACGCAGGAACGGCTCCAGCATCAAGATCCGTCTGACAGTGTTATGTGCCAAGAACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 90 bp CATCAGGGTTTCGAAGCCGCTGTGCCTGAAGTCTTTGATCTTGACTaGGGGACTCCACGAACCTGCAATTCCCTCCTCCAGCAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: HQGFEAAVPEVFDLD*GTPRTCNSLLQQQH
Trigger: GTGCTGCTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAAACCCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS CAA 90 bp TCGCACATCAGGGTTTCGAAGCCGCTGTGCCTGAAGTCTTTGATCTaGACTTGGGGACTCCACGAACCTGCAATTCCCTCCTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SHIRVSKPLCLKSLI*TWGLHEPAIPSSSS
Trigger: GCTGCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAAACCCTGATGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS CCA 72 bp TCGAAGCCGCTGTGCCTGAAGTCTTTGATCTTGACTTaGGGACTCCACGAACCTGCAATTCCCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SKPLCLKSLILT*GLHEPAIPSSS
Trigger: GCTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS CAA 72 bp TCAGGGAGCCTGAAGAAGTCTTTCTTTGCAAGGTTCTaGGCACATAACACTGGGGCAGGGGTCCGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SGSLKKSFFARF*AHNTGAGVREW
Trigger: CCACTCCCGGACCCCTGCCCCAGTGTTATGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGGCTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480055.5
ENST00000639228.1
CDS CAA 72 bp TTCGAAGCCGCTGTGCCTGAAGTCTTTGATCTTGACTaGGGGACTCCACGAACCTGCAATTCCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FEAAVPEVFDLD*GTPRTCNSLLQ
Trigger: CTGGAGGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS CAA 72 bp AGGGTTTCGAAGCCGCTGTGCCTGAAGTCTTTGATCTaGACTTGGGGACTCCACGAACCTGCAATTCCCTCC +
Preference number: 6 (lower is better)
Translates to: RVSKPLCLKSLI*TWGLHEPAIPS
Trigger: GGAGGGAATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS TCA 72 bp GACCAGCTTGGGGCTGCTGAAGCGACAGTTCGTGTCTaGGGACTTTCAGCTTCTGGACTAGATCTCTTTCGT +
Preference number: 6 (lower is better)
Translates to: DQLGAAEATVRV*GLSASGLDLFR
Trigger: ACGAAAGAGATCTAGTCCAGAAGCTGAAAGTCCTCAGACACGAACTGTCGCTTCAGCAGCCCCAAGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 72 bp ACTTTCAGCTTCTGGACTAGATCTCTTTCGTATCTCTaGGCAGGAAGCTCCTCGTCCTCCAGAGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: TFSFWTRSLSYL*AGSSSSSREPS
Trigger: TGAGGGCTCTCTGGAGGACGAGGAGCTTCCTGCCCAGAGATACGAAAGAGATCTAGTCCAGAAGCTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 72 bp TCGATCCGGTTAAAGCAGGTATGGGCCTTCGGAAGGTaGTCTGTGTTCGCGTCTATCAGGTGGATGGTGAAC +
Preference number: 6 (lower is better)
Translates to: SIRLKQVWAFGR*SVFASIRWMVN
Trigger: GTTCACCATCCACCTGATAGACGCGAACACAGACAACCTTCCGAAGGCCCATACCTGCTTTAACCGGATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS TCA 72 bp CCACTTTGGGTCCAATGTGTTTTTCACAGTGTCGGTTaGGTGGCACTGCCCAGACCCATCCACGACAATCTT +
Preference number: 6 (lower is better)
Translates to: PLWVQCVFHSVG*VALPRPIHDNL
Trigger: AAGATTGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAAACACATTGGACCCAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS TCA 72 bp TGTGTTCCACGCAGAAGGTGTGGTCCAGTACAGGCGTaGTGTCGTTCTCTAGGATCCACACCAAGCTCTTAT +
Preference number: 6 (lower is better)
Translates to: CVPRRRCGPVQA*CRSLGSTPSSY
Trigger: ATAAGAGCTTGGTGTGGATCCTAGAGAACGACATCACGCCTGTACTGGACCACACCTTCTGCGTGGAACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CCA 72 bp TATCCTCCCAGAAACTGTACTTCTGACTTCCCAGCCTaGCGGCAGTGGTCCAAGTTCATCACAGTTCACACT +
Preference number: 6 (lower is better)
Translates to: YPPRNCTSDFPA*RQWSKFITVHT
Trigger: AGTGTGAACTGTGATGAACTTGGACCACTGCCGCCAGGCTGGGAAGTCAGAAGTACAGTTTCTGGGAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 72 bp TCCACTTTGGGTCCAATGTGTTTTTCACAGTGTCGGTaGAGTGGCACTGCCCAGACCCATCCACGACAATCT +
Preference number: 6 (lower is better)
Translates to: STLGPMCFSQCR*SGTAQTHPRQS
Trigger: AGATTGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAAACACATTGGACCCAAAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CAA 72 bp CACATCAGGGTTTCGAAGCCGCTGTGCCTGAAGTCTTaGATCTTGACTTGGGGACTCCACGAACCTGCAATT +
Preference number: 6 (lower is better)
Translates to: HIRVSKPLCLKS*ILTWGLHEPAI
Trigger: AATTGCAGGTTCGTGGAGTCCCCAAGTCAAGATCAAAGACTTCAGGCACAGCGGCTTCGAAACCCTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS TCA 72 bp GTGCACAGAAGCTGGATGCTTTTGGTCTGGTGGCCATaGGCTAGACTCTGTTGCCTTTGGTTGCTTTTCACT +
Preference number: 6 (lower is better)
Translates to: VHRSWMLLVWWP*ARLCCLWLLFT
Trigger: AGTGAAAAGCAACCAAAGGCAACAGAGTCTAGCTCATGGCCACCAGACCAAAAGCATCCAGCTTCTGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS GCA 72 bp TCCAATGTGTTTTTCACAGTGTCGGTTGAGTGGCACTaGCCAGACCCATCCACGACAATCTTTGCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: SNVFFTVSVEWH*PDPSTTIFAKG
Trigger: CCCTTTTGCAAAGATTGTCGTGGATGGGTCTGGGCAGTGCCACTCAACCGACACTGTGAAAAACACATTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CCA 72 bp CAGCAGCTTCTCGTAGAGCTTCTCATAGGACTCATATaGTGGAATGTCGATCCGGTTAAAGCAGGTATGGGC +
Preference number: 6 (lower is better)
Translates to: QQLLVELLIGLI*WNVDPVKAGMG
Trigger: GCCCATACCTGCTTTAACCGGATCGACATTCCACCATATGAGTCCTATGAGAAGCTCTACGAGAAGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 72 bp TCTGTGTATGCAAAAAGTAAACTTGGCCCTGGACTGTaGTTCTTTGTTCGTAGCCTTCGGGCAGTTCCGGGG +
Preference number: 6 (lower is better)
Translates to: SVYAKSKLGPGL*FFVRSLRAVPG
Trigger: CCCCGGAACTGCCCGAAGGCTACGAACAAAGAACAACAGTCCAGGGCCAAGTTTACTTTTTGCATACACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS TCA 72 bp CGCACACAGCCCAGGAAGCCAGCTCCCTGTTTCTTGTaGATTTTCTTATGGTTCCACACGCTAATGGTTATC +
Preference number: 6 (lower is better)
Translates to: RTQPRKPAPCFL*IFLWFHTLMVI
Trigger: GATAACCATTAGCGTGTGGAACCATAAGAAAATTCACAAGAAACAGGGAGCTGGCTTCCTGGGCTGTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CCA 72 bp CAGCTTCTCGTAGAGCTTCTCATAGGACTCATATGGTaGAATGTCGATCCGGTTAAAGCAGGTATGGGCCTT +
Preference number: 6 (lower is better)
Translates to: QLLVELLIGLIW*NVDPVKAGMGL
Trigger: AAGGCCCATACCTGCTTTAACCGGATCGACATTCCACCATATGAGTCCTATGAGAAGCTCTACGAGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 90 bp TCGAATCCGTTTTCCCAACATATAGATCATAGTGCTGGTTCCACTTaGGGTCCAATGTGTTTTTCACAGTGTCGGTTGAGTGGCACTGCC +
Preference number: 6 (lower is better)
Translates to: SNPFSQHIDHSAGST*GPMCFSQCRLSGTA
Trigger: GGCAGTGCCACTCAACCGACACTGTGAAAAACACATTGGACCCAAAGTGGAACCAGCACTATGATCTATATGTTGGGAAAACGGATTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CAA 72 bp TCAGGGAGCCTGAAGAAGTCTTTCTTTGCAAGGTTCTaGGCACATAACACTGTCAGACGGATCTTGATGCTG +
Preference number: 6 (lower is better)
Translates to: SGSLKKSFFARF*AHNTVRRILML
Trigger: CAGCATCAAGATCCGTCTGACAGTGTTATGTGCCAAGAACCTTGCAAAGAAAGACTTCTTCAGGCTCCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000638461.1
ENST00000638647.1
CDS CAA 90 bp ACCACTATCTGGCCACGAACTGCATCAGTATCTGAGGGGTTTAGTTaGCATAGATCCAAACGCTGGTATCCGGTATCTTTTAATCTGCTG +
Preference number: 6 (lower is better)
Translates to: TTIWPRTASVSEGFS*HRSKRWYPVSFNLL
Trigger: CAGCAGATTAAAAGATACCGGATACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGATACTGATGCAGTTCGTGGCCAGATAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
CDS GCA 72 bp GGCCACGAACTGCATCAGTATCTGAGGGGTTTAGTTTaGATAGATCCAAACGCTGGTATCCGGTATCTTTTA +
Preference number: 6 (lower is better)
Translates to: GHELHQYLRGLV*IDPNAGIRYLL
Trigger: TAAAAGATACCGGATACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGATACTGATGCAGTTCGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CAA 72 bp TGGCCACGAACTGCATCAGTATCTGAGGGGTTTAGTTaGCATAGATCCAAACGCTGGTATCCGGTATCTTTT +
Preference number: 6 (lower is better)
Translates to: WPRTASVSEGFS*HRSKRWYPVSF
Trigger: AAAAGATACCGGATACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGATACTGATGCAGTTCGTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1
CDS CCA 72 bp CAGTTCACACTGTTAAGGTCTCTGGGCTCAGATGTATaGCCTTGTAGAAGGAATTCGTATAGAAAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: QFTLLRSLGSDV*PCRRNSYRKAA
Trigger: TGCAGCTTTTCTATACGAATTCCTTCTACAAGGCCATACATCTGAGCCCAGAGACCTTAACAGTGTGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361125.1
ENST00000638647.1
CDS CAA 72 bp TTTTCCCAACATATAGATCATAGTGCTGGTTCCACTTaGGGTCCAATGTGTTTTTCACAGTGTCGGTTGAGT +
Preference number: 6 (lower is better)
Translates to: FSQHIDHSAGST*GPMCFSQCRLS
Trigger: ACTCAACCGACACTGTGAAAAACACATTGGACCCAAAGTGGAACCAGCACTATGATCTATATGTTGGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000361125.1
ENST00000361368.7
ENST00000472627.1
ENST00000480055.5
ENST00000638461.1
ENST00000638647.1
ENST00000639228.1
ENST00000639855.1