Pregenerated sensors for SMPX (Homo sapiens)
Ensembl gene IDs: ENSG00000091482Ensembl transcript IDs: ENST00000379494.4, ENST00000494525.1, ENST00000646008.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGTGGAAGGAAGTGCCACTGTCCTTCCTATAGAAGGCATCCAATaGCTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCA | + |
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Preference number: 1 (lower is better) Translates to: RVEGSATVLPIEGIQ*LSGNRTRLLSAVYP Trigger: TGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGATGCCTTCTATAGGAAGGACAGTGGCACTTCCTTCCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR GCA 90 bp | TTACTTGTTAAGGATTCTATTACATCGGTGACAGGTGGAAGGAAGTaGCACTATCTTCTAGGGTGGAAGGAAGTGCCACTGTCCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LLVKDSITSVTGGRK*HYLLGWKEVPLSFL Trigger: TAGGAAGGACAGTGGCACTTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAATCCTTAACAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR-3UTR TCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGCCAGATGAATTGTTCTaGGCAACCTTTGTGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: SNDFLAIGHACFRLFIQQPDELF*ATFVPP Trigger: AGGTGGCACAAAGGTTGCTCAGAACAATTCATCTGG...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR-3UTR TCA 90 bp | ATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAAGGAAATAGAAGGCATCCAATaGCTTTCTGGCAATAGGACA | + |
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Preference number: 2 (lower is better) Translates to: ITSVTGGRKCHYLLGWKEIEGIQ*LSGNRT Trigger: TGTCCTATTGCCAGAAAGTCATTGGATGCCTTCTAT...TTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR-3UTR TCA 90 bp | CATGATTCTTATCATCTGTATCCAAAATTGGGGGATCAGGTAAGAGCTAGGCAGATTCTATTACATCGGTaGCAGGTGGAAGGAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HDSYHLYPKLGDQVRARQILLHR*QVEGSA Trigger: GGCACTTCCTTCCACCTGTCACCGATGTAATAGAAT...CTGCCTAGCTCTTACCTGATCCCCCAATTTTGGATACAGATGATAAGAATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAATTTTAGTGAGCTATTaGATCCATCTTCTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LGKLFIKIVRHIAISFSIILVSY*IHLLPL Trigger: AAGAGGCAGAAGATGGATTCAATAGCTCACTAAAAT...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATACAGGTGTTGAATTTATaGGCTAATTTGTTCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LGKLFIKIVRHIAISFSIQVLNL*ANLFCE Trigger: CTCACAGAACAAATTAGCCCATAAATTCAACACCTG...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| 3UTR-3UTR TCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCATTTTAGTGAGCTATTaGATCCATCTTCTGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLNPSSASLFLHINPLLIILVSY*IHLLPL Trigger: AAGAGGCAGAAGATGGATTCAATAGCTCACTAAAAT...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
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| 3UTR-3UTR TCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCGCGTCATTACCACTTTaGTACTTATTTTGTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLNPSSASLFLHINPLLIASLPL*YLFCSS Trigger: AGAGGAACAAAATAAGTATCAAAGTGGTAATGACGC...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
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| 3UTR TCA 72 bp | CACGCTTGCTTTCGGCTGTTTATCCAGCAGTCCAGATaGATTGTTCTGAGCAACCTTTGTGCCACCTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: HACFRLFIQQSR*IVLSNLCATCL Trigger: AAGGCAGGTGGCACAAAGGTTGCTCAGAACAATTCATCTGGACTGCTGGATAAACAGCCGAAAGCAAGCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR GCA 72 bp | AAGGATTCTATTACATCGGTGACAGGTGGAAGGAAGTaGCACTATCTTCTAGGGTGGAAGGAAGTGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: KDSITSVTGGRK*HYLLGWKEVPL Trigger: CAGTGGCACTTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| 3UTR TCA 72 bp | ATCATATCCCTCCTCAAAACCACACCCTCCAGGTGTTaGATTTATGGGCTAATTTGTTCTGTGAGGTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: IISLLKTTPSRC*IYGLICSVRCQ Trigger: TTGGCACCTCACAGAACAAATTAGCCCATAAATTCAACACCTGGAGGGTGTGGTTTTGAGGAGGGATATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| 3UTR CCA 72 bp | CCTCCTCAAAACCACACCCTCCAGGTGTTGAATTTATaGGCTAATTTGTTCTGTGAGGTGCCAAAAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: PPQNHTLQVLNL*ANLFCEVPKMK Trigger: CTTCATTTTTGGCACCTCACAGAACAAATTAGCCCATAAATTCAACACCTGGAGGGTGTGGTTTTGAGGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATACACACCCTCCAGGTGTaGAATTTATGGGCTAATTTG | + |
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Preference number: 3 (lower is better) Translates to: LGKLFIKIVRHIAISFSIHTLQV*NLWANL Trigger: CAAATTAGCCCATAAATTCAACACCTGGAGGGTGTG...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAAATTTATGGGCTAATTaGTTCTGTGAGGTGCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: LGKLFIKIVRHIAISFSINLWAN*FCEVPK Trigger: TTTTGGCACCTCACAGAACAAATTAGCCCATAAATT...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| 3UTR-3UTR CAA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATTGCGTCATTACCACTTaGATACTTATTTTGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: AIESIFCLFISSHQSFANCVITT*ILILFL Trigger: GAGGAACAAAATAAGTATCAAAGTGGTAATGACGCA...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
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| CDS-3UTR TCA 90 bp | ATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAAGGAAGCGCCCGGTGTCCTCTaGGCTGCGATCTCAATTCCG | + |
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Preference number: 4 (lower is better) Translates to: ITSVTGGRKCHYLLGWKEAPGVL*AAISIP Trigger: CGGAATTGAGATCGCAGCTCAGAGGACACCGGGCGC...TTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | AATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGTCCAAGCTCCTTGGAAGGTaGAAGGGGCGCCCGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NDFLAIGHACFRLFIQQSKLLGR*KGRPVS Trigger: GGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTT...GGACTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | ATGTACAAACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATGCGCCCGGTGTCCTCTaGGCTGCGATCTCAATTCCG | + |
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Preference number: 4 (lower is better) Translates to: MYKQAISARVSGIQEVHNAPGVL*AAISIP Trigger: CGGAATTGAGATCGCAGCTCAGAGGACACCGGGCGC...ATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTTTGTACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR GCA 90 bp | TCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAAGGAAGTGCCAACAGGTGGAAGGAAGTaGCACTATCTTCTAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVTGGRKCHYLLGWKEVPTGGRK*HYLLGW Trigger: CCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGT...TGGCACTTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | AACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATAAAGCTCCTTGGAAGGTaGAAGGGGCGCCCGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NRPFLLESQAFRRFTIIIKLLGR*KGRPVS Trigger: GGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTT...TATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR GCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGCGGTGTCCTCTGAGCTaGGATCTCAATTCCGATGCT | + |
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Preference number: 4 (lower is better) Translates to: SNDFLAIGHACFRLFIQQRCPLS*DLNSDA Trigger: AGCATCGGAATTGAGATCGCAGCTCAGAGGACACCG...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | ATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAAGGAAATTGACTGCAGGTCCTaGAAGTTTCTTCGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ITSVTGGRKCHYLLGWKEIDCRS*KFLRSW Trigger: CCAGGAGCGAAGAAACTTCCAGGACCTGCAGTCAAT...TTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGCACTATCTTCTAGGGTaGAAGGAAGTGCCACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SNDFLAIGHACFRLFIQQHYLLG*KEVPLS Trigger: GGACAGTGGCACTTCCTTCCACCCTAGAAGATAGTG...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGGGATTTCCGATAGATTaGCTGCAGGTCCTGGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SNDFLAIGHACFRLFIQQGFPID*LQVLEV Trigger: AACTTCCAGGACCTGCAGTCAATCTATCGGAAATCC...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | CATGATTCTTATCATCTGTATCCAAAATTGGGGGATCAGGTAAGAGCTAGGCAGGAATACAAAGCTCCTTaGAAGGTGGAAGGGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: HDSYHLYPKLGDQVRARQEYKAP*KVEGAP Trigger: GGGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTC...CTGCCTAGCTCTTACCTGATCCCCCAATTTTGGATACAGATGATAAGAATCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | TTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAACCAGATGAATTGTTCTaGGCAACCTTTGTGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: FYYIGDRWKEVPLSSRVEPDELF*ATFVPP Trigger: AGGTGGCACAAAGGTTGCTCAGAACAATTCATCTGG...TTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR GCA 90 bp | GCACATTGCCATATCATTCTCCATAAAATCATATCCCTCCTCAAAACCACACCCCGGTGTCCTCTGAGCTaGGATCTCAATTCCGATGCT | + |
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Preference number: 4 (lower is better) Translates to: AHCHIILHKIISLLKTTPRCPLS*DLNSDA Trigger: AGCATCGGAATTGAGATCGCAGCTCAGAGGACACCG...GGGTGTGGTTTTGAGGAGGGATATGATTTTATGGAGAATGATATGGCAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR GCA 90 bp | TTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAATCCCAGGCAGCCAGATaGAAGAATACAAAGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: FYYIGDRWKEVPLSSRVESQAAR*KNTKLL Trigger: AAGGAGCTTTGTATTCTTGCATCTGGCTGCCTGGGA...TTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAGGGTTGACCTGCTCCTaGCCGAAAGGCTCCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: LGKLFIKIVRHIAISFSIGLTCS*PKGSHW Trigger: CCAATGGGAGCCTTTCGGCCAGGAGCAGGTCAACCC...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR CCA 90 bp | ATGTACAAACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATATTGACTGCAGGTCCTaGAAGTTTCTTCGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: MYKQAISARVSGIQEVHNIDCRS*KFLRSW Trigger: CCAGGAGCGAAGAAACTTCCAGGACCTGCAGTCAAT...ATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTTTGTACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR CCA 90 bp | TTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAATACATCGGTGACAGGTaGAAGGAAGTGCCACTATCT | + |
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Preference number: 4 (lower is better) Translates to: FYYIGDRWKEVPLSSRVEYIGDR*KEVPLS Trigger: AGATAGTGGCACTTCCTTCCACCTGTCACCGATGTA...TTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | AACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATATGCTTTTCATGTGGCTaGAATAGCTCTGTGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NRPFLLESQAFRRFTIIICFSCG*NSSVPL Trigger: GAGAGGCACAGAGCTATTTCAGCCACATGAAAAGCA...TATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR GCA 90 bp | TATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAAGGATATGTATTTGTTTACTaGCTAAGGGAAGTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: YYIGDRWKEVPLSSRVEGYVFVY*LREVPG Trigger: GCCTGGGACTTCCCTTAGGCAGTAAACAAATACATA...TCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | CTTGTTAAGGATTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTATTCTATTACATCGGTaGCAGGTGGAAGGAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LVKDSITSVTGGRKCHYLILLHR*QVEGSA Trigger: GGCACTTCCTTCCACCTGTCACCGATGTAATAGAAT...AAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAATCCTTAACAAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR GCA 90 bp | GCACATTGCCATATCATTCTCCATAAAATCATATCCCTCCTCAAAACCACACCCTCCCAGGCAGCCAGATaGAAGAATACAAAGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AHCHIILHKIISLLKTTPSQAAR*KNTKLL Trigger: AAGGAGCTTTGTATTCTTGCATCTGGCTGCCTGGGA...GGGTGTGGTTTTGAGGAGGGATATGATTTTATGGAGAATGATATGGCAATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR CCA 90 bp | TTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATACAAATATATGAATACAAAGCTCCTTaGAAGGTGGAAGGGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: FLLESQAFRRFTIIIQIYEYKAP*KVEGAP Trigger: GGGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTC...ATATATTTGTATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR CCA 90 bp | CTTGTTAAGGATTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTTACATTCTTTTCTTCTaGGGGGTTGACCTGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LVKDSITSVTGGRKCHYLYILFF*GVDLLL Trigger: CAGGAGCAGGTCAACCCCCCAGAAGAAAAGAATGTA...AAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAATCCTTAACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGACTAAAATGCAGCCATaGTTCTTATCATCTGTATCC | + |
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Preference number: 4 (lower is better) Translates to: SNDFLAIGHACFRLFIQQTKMQP*FLSSVS Trigger: GGATACAGATGATAAGAATCATGGCTGCATTTTAGT...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR GCA 90 bp | AATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGTCCGTTTCGACATATTCATaGAGTCTTATCCCTGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: NDFLAIGHACFRLFIQQSVSTYS*SLIPAL Trigger: TAAAGCAGGGATAAGACTGCATGAATATGTCGAAAC...GGACTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR CCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGACTACTGTTCAGCTTTaGGGACATATTTTAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SNDFLAIGHACFRLFIQQTTVQL*GHILVH Trigger: GTGAACTAAAATATGTCCCCAAAGCTGAACAGTAGT...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | CTTGTTAAGGATTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTATAGAAGGCATCCAATaGCTTTCTGGCAATAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LVKDSITSVTGGRKCHYLIEGIQ*LSGNRT Trigger: TGTCCTATTGCCAGAAAGTCATTGGATGCCTTCTAT...AAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAATCCTTAACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR GCA 90 bp | GCACATTGCCATATCATTCTCCATAAAATCATATCCCTCCTCAAAACCACACCCTATGTATTTGTTTACTaGCTAAGGGAAGTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AHCHIILHKIISLLKTTPYVFVY*LREVPG Trigger: GCCTGGGACTTCCCTTAGGCAGTAAACAAATACATA...GGGTGTGGTTTTGAGGAGGGATATGATTTTATGGAGAATGATATGGCAATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR GCA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGTGGAATATTGATATTTaGCTGGATGGCTCTAACATT | + |
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Preference number: 4 (lower is better) Translates to: SNDFLAIGHACFRLFIQQWNIDI*LDGSNI Trigger: AATGTTAGAGCCATCCAGGCAAATATCAATATTCCA...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
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| CDS-3UTR TCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAGGATTTCCGATAGATTaGCTGCAGGTCCTGGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LGKLFIKIVRHIAISFSIGFPID*LQVLEV Trigger: AACTTCCAGGACCTGCAGTCAATCTATCGGAAATCC...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR TCA 90 bp | AACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATAATTTTAGTGAGCTATTaGATCCATCTTCTGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NRPFLLESQAFRRFTIIIILVSY*IHLLPL Trigger: AAGAGGCAGAAGATGGATTCAATAGCTCACTAAAAT...TATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS-3UTR GCA 90 bp | AACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATAGTTTCGACATATTCATaGAGTCTTATCCCTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NRPFLLESQAFRRFTIIIVSTYS*SLIPAL Trigger: TAAAGCAGGGATAAGACTGCATGAATATGTCGAAAC...TATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATACAAATATATTACATTCTTTTCTTCTaGGGGGTTGACCTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLLESQAFRRFTIIIQIYYILFF*GVDLLL Trigger: CAGGAGCAGGTCAACCCCCCAGAAGAAAAGAATGTA...ATATATTTGTATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCATTGACTGCAGGTCCTaGAAGTTTCTTCGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLNPSSASLFLHINPLLIIDCRS*KFLRSW Trigger: CCAGGAGCGAAGAAACTTCCAGGACCTGCAGTCAAT...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATACTCCCATTGGAATATTaGTATTTGCCTGGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKLFIKIVRHIAISFSILPLEY*YLPGWL Trigger: GAGCCATCCAGGCAAATATCAATATTCCAATGGGAG...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR TCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCGGATTTCCGATAGATTaGCTGCAGGTCCTGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNPSSASLFLHINPLLIGFPID*LQVLEV Trigger: AACTTCCAGGACCTGCAGTCAATCTATCGGAAATCC...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR GCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCTCCCAGGCAGCCAGATaGAAGAATACAAAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLNPSSASLFLHINPLLISQAAR*KNTKLL Trigger: AAGGAGCTTTGTATTCTTGCATCTGGCTGCCTGGGA...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR CCA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATTACATTCTTTTCTTCTaGGGGGTTGACCTGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIESIFCLFISSHQSFANYILFF*GVDLLL Trigger: CAGGAGCAGGTCAACCCCCCAGAAGAAAAGAATGTA...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR TCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCCTCCCATTGGAATATTaGTATTTGCCTGGATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNPSSASLFLHINPLLILPLEY*YLPGWL Trigger: GAGCCATCCAGGCAAATATCAATATTCCAATGGGAG...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATACAAATATATACACCCTCCAGGTGTTaGATTTATGGGCTAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLESQAFRRFTIIIQIYTPSRC*IYGLIC Trigger: ACAAATTAGCCCATAAATTCAACACCTGGAGGGTGT...ATATATTTGTATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR GCA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATTATGTATTTGTTTACTaGCTAAGGGAAGTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIESIFCLFISSHQSFANYVFVY*LREVPG Trigger: GCCTGGGACTTCCCTTAGGCAGTAAACAAATACATA...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAACGCATTCCAAATATTaGCCAAAATACTGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKLFIKIVRHIAISFSITHSKY*PKYCRK Trigger: CTTCCTACAGTATTTTGGTCAATATTTGGAATGCGT...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAACTACTGTTCAGCTTTaGGGACATATTTTAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKLFIKIVRHIAISFSITTVQL*GHILVH Trigger: GTGAACTAAAATATGTCCCCAAAGCTGAACAGTAGT...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATACAAATATATCAGGTGTTGAATTTATaGGCTAATTTGTTCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLESQAFRRFTIIIQIYQVLNL*ANLFCE Trigger: CTCACAGAACAAATTAGCCCATAAATTCAACACCTG...ATATATTTGTATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR TCA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATATTTTAGTGAGCTATTaGATCCATCTTCTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AIESIFCLFISSHQSFANILVSY*IHLLPL Trigger: AAGAGGCAGAAGATGGATTCAATAGCTCACTAAAAT...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR TCA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATGCGTCATTACCACTTTaGTACTTATTTTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIESIFCLFISSHQSFANASLPL*YLFCSS Trigger: AGAGGAACAAAATAAGTATCAAAGTGGTAATGACGC...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR GCA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATGTTTCGACATATTCATaGAGTCTTATCCCTGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AIESIFCLFISSHQSFANVSTYS*SLIPAL Trigger: TAAAGCAGGGATAAGACTGCATGAATATGTCGAAAC...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATATGGAATATTGATATTTaGCTGGATGGCTCTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LGKLFIKIVRHIAISFSIWNIDI*LDGSNI Trigger: AATGTTAGAGCCATCCAGGCAAATATCAATATTCCA...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CCA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATACTACTGTTCAGCTTTaGGGACATATTTTAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AIESIFCLFISSHQSFANTTVQL*GHILVH Trigger: GTGAACTAAAATATGTCCCCAAAGCTGAACAGTAGT...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR GCA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCTGGAATATTGATATTTaGCTGGATGGCTCTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LLNPSSASLFLHINPLLIWNIDI*LDGSNI Trigger: AATGTTAGAGCCATCCAGGCAAATATCAATATTCCA...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS CCA 90 bp | AAGTCCCAGGCAGCCAGATGCAAGAATACAAAGCTCCTTGGAAGGTaGAAGGGGCGCCCGGTGTCCTCTGAGCTGCGATCTCAATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KSQAARCKNTKLLGR*KGRPVSSELRSQFR Trigger: TCGGAATTGAGATCGCAGCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTCTTGCATCTGGCTGCCTGGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379494.4 ENST00000646008.1 |
||
| CDS GCA 90 bp | CAAAGCTCCTTGGAAGGTGGAAGGGGCGCCCGGTGTCCTCTGAGCTaGGATCTCAATTCCGATGCTTTTCATGTGGCTGAAATAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSLEGGRGARCPLS*DLNSDAFHVAEIAL Trigger: CAGAGCTATTTCAGCCACATGAAAAGCATCGGAATTGAGATCGCAGCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS CCA 90 bp | TGGGAGGAACACCCTCCTCCACTTCAGGAGTACATTCTTTTCTTCTaGGGGGTTGACCTGCTCCTGGCCGAAAGGCTCCCATTGGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: WEEHPPPLQEYILFF*GVDLLLAERLPLEY Trigger: ATATTCCAATGGGAGCCTTTCGGCCAGGAGCAGGTCAACCCCCCAGAAGAAAAGAATGTACTCCTGAAGTGGAGGAGGGTGTTCCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000379494.4 ENST00000494525.1 ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | TCGGTGACAGGTGGAAGGAAGTGCCACTATCTTCTAGGGTGGAAGGAAGTGCCAGCTCCCATTGGAATATaGATATTTGCCTGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVTGGRKCHYLLGWKEVPAPIGI*IFAWMA Trigger: AGCCATCCAGGCAAATATCAATATTCCAATGGGAGC...TGGCACTTCCTTCCACCCTAGAAGATAGTGGCACTTCCTTCCACCTGTCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | CATGATTCTTATCATCTGTATCCAAAATTGGGGGATCAGGTAAGAGCTAGGCAGAGAATACAAAGCTCCTaGGAAGGTGGAAGGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HDSYHLYPKLGDQVRARQRIQSS*EGGRGA Trigger: GGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTCT...CTGCCTAGCTCTTACCTGATCCCCCAATTTTGGATACAGATGATAAGAATCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | GCACATTGCCATATCATTCTCCATAAAATCATATCCCTCCTCAAAACCACACCCTCTTCGCTCCTGGAATaGGCTTCTTCTCCTCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: AHCHIILHKIISLLKTTPSSLLE*ASSPHP Trigger: CGGATGAGGAGAAGAAGCCAATTCCAGGAGCGAAGA...GGGTGTGGTTTTGAGGAGGGATATGATTTTATGGAGAATGATATGGCAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTTAAGGATTCTATTACATCGGTGACAGGTGGAAGGAAGTGCCACTATCTTTCTTCGCTCCTGGAATaGGCTTCTTCTCCTCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LVKDSITSVTGGRKCHYLSSLLE*ASSPHP Trigger: CGGATGAGGAGAAGAAGCCAATTCCAGGAGCGAAGA...AAGATAGTGGCACTTCCTTCCACCTGTCACCGATGTAATAGAATCCTTAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAAGAATACAAAGCTCCTaGGAAGGTGGAAGGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGKLFIKIVRHIAISFSIRIQSS*EGGRGA Trigger: GGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTCT...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | CATGATTCTTATCATCTGTATCCAAAATTGGGGGATCAGGTAAGAGCTAGGCAGTGGATGGCTCTAACATaGGAAACTGGCTGTTTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: HDSYHLYPKLGDQVRARQWMALT*ETGCFD Trigger: GTCGAAACAGCCAGTTTCCAATGTTAGAGCCATCCA...CTGCCTAGCTCTTACCTGATCCCCCAATTTTGGATACAGATGATAAGAATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | CATGATTCTTATCATCTGTATCCAAAATTGGGGGATCAGGTAAGAGCTAGGCAGTGGATTTCCGATAGATaGACTGCAGGTCCTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HDSYHLYPKLGDQVRARQWISDR*TAGPGS Trigger: ACTTCCAGGACCTGCAGTCAATCTATCGGAAATCCA...CTGCCTAGCTCTTACCTGATCCCCCAATTTTGGATACAGATGATAAGAATCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | TCCAATGACTTTCTGGCAATAGGACACGCTTGCTTTCGGCTGTTTATCCAGCAGTACTACTGTTCAGCTTaGGGGACATATTTTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SNDFLAIGHACFRLFIQQYYCSA*GTYFSS Trigger: TGAACTAAAATATGTCCCCAAAGCTGAACAGTAGTA...CTGCTGGATAAACAGCCGAAAGCAAGCGTGTCCTATTGCCAGAAAGTCATTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646008.1 |
||
| CDS-3UTR CAA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATTCTTCGCTCCTGGAATaGGCTTCTTCTCCTCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: AIESIFCLFISSHQSFANSSLLE*ASSPHP Trigger: CGGATGAGGAGAAGAAGCCAATTCCAGGAGCGAAGA...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATCATCATACAAATATATTGGATGGCTCTAACATaGGAAACTGGCTGTTTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLLESQAFRRFTIIIQIYWMALT*ETGCFD Trigger: GTCGAAACAGCCAGTTTCCAATGTTAGAGCCATCCA...ATATATTTGTATGATGATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATATGGATTTCCGATAGATaGACTGCAGGTCCTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LGKLFIKIVRHIAISFSIWISDR*TAGPGS Trigger: ACTTCCAGGACCTGCAGTCAATCTATCGGAAATCCA...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | ATGTACAAACAGGCCATTTCTGCTAGAGTCTCAGGCATTCAGGAGGTTCACAATTACTACTGTTCAGCTTaGGGGACATATTTTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MYKQAISARVSGIQEVHNYYCSA*GTYFSS Trigger: TGAACTAAAATATGTCCCCAAAGCTGAACAGTAGTA...ATTGTGAACCTCCTGAATGCCTGAGACTCTAGCAGAAATGGCCTGTTTGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCTGGATGGCTCTAACATaGGAAACTGGCTGTTTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLNPSSASLFLHINPLLIWMALT*ETGCFD Trigger: GTCGAAACAGCCAGTTTCCAATGTTAGAGCCATCCA...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAGCTCCCATTGGAATATaGATATTTGCCTGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGKLFIKIVRHIAISFSIAPIGI*IFAWMA Trigger: AGCCATCCAGGCAAATATCAATATTCCAATGGGAGC...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATTGGATTTCCGATAGATaGACTGCAGGTCCTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AIESIFCLFISSHQSFANWISDR*TAGPGS Trigger: ACTTCCAGGACCTGCAGTCAATCTATCGGAAATCCA...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR CAA 90 bp | GCACATTGCCATATCATTCTCCATAAAATCATATCCCTCCTCAAAACCACACCCAATTTATGGGCTAATTaGTTCTGTGAGGTGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AHCHIILHKIISLLKTTPNLWAN*FCEVPK Trigger: TTTTGGCACCTCACAGAACAAATTAGCCCATAAATT...GGGTGTGGTTTTGAGGAGGGATATGATTTTATGGAGAATGATATGGCAATGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCGCTCCCATTGGAATATaGATATTTGCCTGGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLNPSSASLFLHINPLLIAPIGI*IFAWMA Trigger: AGCCATCCAGGCAAATATCAATATTCCAATGGGAGC...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAAACTTTTCATCAAAATCGTTAGGCACATTGCCATATCATTCTCCATAACTGTAGGAAGTAGCTaGGGAAACTTTTCATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGKLFIKIVRHIAISFSITVGSS*GNFSSK Trigger: TTTTGATGAAAAGTTTCCCAAGCTACTTCCTACAGT...TATGGAGAATGATATGGCAATGTGCCTAACGATTTTGATGAAAAGTTTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000379494.4 |
||
| CDS-3UTR CAA 90 bp | GCTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATTACTACTGTTCAGCTTaGGGGACATATTTTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIESIFCLFISSHQSFANYYCSA*GTYFSS Trigger: TGAACTAAAATATGTCCCCAAAGCTGAACAGTAGTA...ATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS-3UTR CAA 90 bp | CTATTGAATCCATCTTCTGCCTCTTTATTTCTTCACATCAATCCTTTGCTAATCTGCGTCATTACCACTTaGATACTTATTTTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNPSSASLFLHINPLLICVITT*ILILFL Trigger: GAGGAACAAAATAAGTATCAAAGTGGTAATGACGCA...GATTAGCAAAGGATTGATGTGAAGAAATAAAGAGGCAGAAGATGGATTCAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494525.1 |
||
| CDS CAA 72 bp | AGTCCCAGGCAGCCAGATGCAAGAATACAAAGCTCCTaGGAAGGTGGAAGGGGCGCCCGGTGTCCTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPRQPDARIQSS*EGGRGARCPLS Trigger: GCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTCTTGCATCTGGCTGCCTGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379494.4 ENST00000646008.1 |
||
| CDS CAA 90 bp | CCTAAGGGAAGTCCCAGGCAGCCAGATGCAAGAATACAAAGCTCCTaGGAAGGTGGAAGGGGCGCCCGGTGTCCTCTGAGCTGCGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: PKGSPRQPDARIQSS*EGGRGARCPLSCDL Trigger: GAGATCGCAGCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTCTTGCATCTGGCTGCCTGGGACTTCCCTTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379494.4 ENST00000646008.1 |
||
| CDS TCA 72 bp | GCTCCTTGGAAGGTGGAAGGGGCGCCCGGTGTCCTCTaGGCTGCGATCTCAATTCCGATGCTTTTCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: APWKVEGAPGVL*AAISIPMLFMW Trigger: CCACATGAAAAGCATCGGAATTGAGATCGCAGCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379494.4 ENST00000646008.1 |
||
| CDS CCA 72 bp | GCAGCCAGATGCAAGAATACAAAGCTCCTTGGAAGGTaGAAGGGGCGCCCGGTGTCCTCTGAGCTGCGATCT | + |
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Preference number: 6 (lower is better) Translates to: AARCKNTKLLGR*KGRPVSSELRS Trigger: AGATCGCAGCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAAGGAGCTTTGTATTCTTGCATCTGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379494.4 ENST00000646008.1 |
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| CDS CCA 72 bp | CACCCTCCTCCACTTCAGGAGTACATTCTTTTCTTCTaGGGGGTTGACCTGCTCCTGGCCGAAAGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: HPPPLQEYILFF*GVDLLLAERLP Trigger: TGGGAGCCTTTCGGCCAGGAGCAGGTCAACCCCCCAGAAGAAAAGAATGTACTCCTGAAGTGGAGGAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000379494.4 ENST00000494525.1 ENST00000646008.1 |
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| CDS GCA 72 bp | TTGGAAGGTGGAAGGGGCGCCCGGTGTCCTCTGAGCTaGGATCTCAATTCCGATGCTTTTCATGTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LEGGRGARCPLS*DLNSDAFHVAE Trigger: TTCAGCCACATGAAAAGCATCGGAATTGAGATCGCAGCTCAGAGGACACCGGGCGCCCCTTCCACCTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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| CDS TCA 72 bp | GAGCTGCGATCTCAATTCCGATGCTTTTCATGTGGCTaGAATAGCTCTGTGCCTCTCCCGGTATTGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: ELRSQFRCFSCG*NSSVPLPVLRT Trigger: AGTTCTCAATACCGGGAGAGGCACAGAGCTATTTCAGCCACATGAAAAGCATCGGAATTGAGATCGCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379494.4 |
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