Pregenerated sensors for SMPDL3A (Homo sapiens)
Ensembl gene IDs: ENSG00000172594Ensembl transcript IDs: ENST00000368440.5, ENST00000487215.1, ENST00000539041.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGGAGGGCCGCGGGGCTaGCCTGGAGGTTCGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKGGPRG*PGGSGC Trigger: ACAGCCCGAACCTCCAGGTCAGCCCCGCGGCCCTCC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACCGGAGGAGGATTCCTaGCGCCTGCGGGCGCCACGG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKPEEDS*RLRAPR Trigger: CCGTGGCGCCCGCAGGCGGCAGGAATCCTCCTCCGG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAAGGCCGGAGCGGCAGTaGCAGGCAGTCAGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKRPERQ*QAVSRQ Trigger: CTGCCTGCTGACTGCCTGGCACTGCCGCTCCGGCCT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACAGGCAGCAGACGAGTaGGCGCACCAGCGCCATGGA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKQAADE*AHQRHG Trigger: TCCATGGCGCTGGTGCGCGCACTCGTCTGCTGCCTG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGAGACAGAAGACGGCTaGGGGTGTAGACGTCCGACT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKETEDG*GCRRPT Trigger: AGTCGGACGTCTACACCCGCAGCCGTCTTCTGTCTC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATCAGGTACAGGAACATaGGGTGGGCTATCCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSGTGT*GGLSPV Trigger: GACAGGGGATAGCCCACCTCATGTTCCTGTACCTGA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGTCCGACTGATCACGTaGAAAGGCAGATTCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKVRLIT*KGRFRS Trigger: GCTGCGGAATCTGCCTTTGCACGTGATCAGTCGGAC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATCAGGTACAGGAACATaGGGTGGGCTATCCCTATCG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSGTGT*GGLSLS Trigger: CGATAGGGATAGCCCACCTCATGTTCCTGTACCTGA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATACAGGAACATGAGGTaGGCTATCCCTATCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKYRNMR*AIPIAG Trigger: TCCGGCGATAGGGATAGCCCACCTCATGTTCCTGTA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATGCTGTGATGTTCTGTaGAGATGGCAGATACCCCAC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKCCDVL*RWQIPH Trigger: GTGGGGTATCTGCCATCTTCACAGAACATCACAGCA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACGCCTGACCTTCAGCTaGTGTTTAGCGATGATCTGT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKRLTFS*CLAMIC Trigger: ACAGATCATCGCTAAACAGCAGCTGAAGGTCAGGCG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACCCCTGTCCATATCATaGAAGATGCTTCTTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKPLSIS*KMLLVQ Trigger: CTGGACAAGAAGCATCTTTCATGATATGGACAGGGG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATACAGGAACATGAGGTaGGCTATCCCCTGTCCATAT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKYRNMR*AIPCPY Trigger: ATATGGACAGGGGATAGCCCACCTCATGTTCCTGTA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGCCATTCAAACTGGTTaGCTGGGTCAGTCTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKAIQTG*LGQSCS Trigger: TGAACAAGACTGACCCAGCCAACCAGTTTGAATGGC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATCTAGCCATTCAAACTaGTTGGCTGGGTCAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSSHSN*LAGSVL Trigger: CAAGACTGACCCAGCCAACCAGTTTGAATGGCTAGA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAACTCCAGCTTCCAGATaGACTCTCCCTTTAGATTCG | + |
|
Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKTPASR*TLPLDS Trigger: CGAATCTAAAGGGAGAGTCCATCTGGAAGCTGGAGT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATGTACACTTTACTGGTaGCTACAGGCAGTTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKCTLYW*LQAVDP Trigger: AGGATCAACTGCCTGTAGTCACCAGTAAAGTGTACA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATCACGAGGATCATACTaGAACAGTCTGATACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSRGSY*NSLIPG Trigger: TCCTGGTATCAGACTGTTTCAGTATGATCCTCGTGA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATGTAAGTCAGTCACATaGCAAAACTGTCCTATCGCC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKCKSVT*QNCPIA Trigger: GGCGATAGGACAGTTTTGGCATGTGACTGACTTACA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACCCCACTGGAACATGTaGTATGATATACACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKPHWNM*YDIHLL Trigger: GAGAAGGTGTATATCATAGCACATGTTCCAGTGGGG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAAGGCAGTTGATCCTGTaGCCAATAGTCATGATTACC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKRQLIL*PIVMIT Trigger: GGTAATCATGACTATTGGCCACAGGATCAACTGCCT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATTCAAACTGGTTGGCTaGGTCAGTCTTGTTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKFKLVG*VSLVQC Trigger: ACACTGAACAAGACTGACCCAGCCAACCAGTTTGAA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACTTAGCGTCAGTGTTTaGCCTAGGAAGGAATGTACT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKLSVSV*PRKECT Trigger: AGTACATTCCTTCCTAGGCCAAACACTGACGCTAAG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATATAACAGTGTCTGTTaGGAGTTCAGGTACAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKYNSVC*EFRYRN Trigger: GTTCCTGTACCTGAACTCTCAACAGACACTGTTATA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAATTCTCTCATTGCTGTaGTGTTCTGTGAAGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKILSLL*CSVKMA Trigger: TGCCATCTTCACAGAACATCACAGCAATGAGAGAAT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACATACTGAAACAGTCTaGTACCAGGATTGTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKHTETV*YQDCWS Trigger: AGACCAACAATCCTGGTATCAGACTGTTTCAGTATG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATATCAGTGGTGCAGTTaGTGTCAAACACTGACATAC | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKYQWCS*CQTLTY Trigger: GTATGTCAGTGTTTGACATCAACTGCACCACTGATA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACCAGAGGTTTGCTACTaGATTGTACACTTTACTGGT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKPEVCY*IVHFTG Trigger: ACCAGTAAAGTGTACAATGCAGTAGCAAACCTCTGG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGAAAACCTGGAGATTTaGAAAGAGACTCTGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKENLEI*KETLDG Trigger: ACCATCCAGAGTCTCTTTCCAAATCTCCAGGTTTTC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATGGCAGATACCCCACTaGAACATGTGCTATGATATA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKWQIPH*NMCYDI Trigger: TATATCATAGCACATGTTCCAGTGGGGTATCTGCCA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAATTTGCACCTTTAGATaGAGCACACACTTTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKICTFR*STHFCV Trigger: CACACAAAAGTGTGTGCTTCATCTAAAGGTGCAAAT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATGGTTTCCAGAGGTTTaGTACTGCATTGTACACTTT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKWFPEV*YCIVHF Trigger: AAAGTGTACAATGCAGTAGCAAACCTCTGGAAACCA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGCTGACAAAATAAGTTaGTATGGAGAATCACACAGA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKADKIS*YGESHR Trigger: TCTGTGTGATTCTCCATATCAACTTATTTTGTCAGC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR TCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATTCTCCTTATTCTGCTaGGAGTTGTTCAATGTACTT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKFSLFC*ELFNVL Trigger: AAGTACATTGAACAACTCTCAGCAGAATAAGGAGAA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATTTGGAAAGAGACTCTaGATGGTGGTTGTCATATTA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKFGKRL*MVVVIL Trigger: TAATATGACAACCACCATCCAGAGTCTCTTTCCAAA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACAGTGTCATTATATTTaGGCCGTAGTACAAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKQCHYI*AVVQVC Trigger: ACAAACTTGTACTACGGCCCAAATATAATGACACTG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATATCACATGTTACACTaGTGTCATAACTCACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKYHMLH*CHNSQR Trigger: TCTTTGTGAGTTATGACAGCAGTGTAACATGTGATA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR GCA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACTGTTTGAGGCAATCTaGATAGGAAATATTATCAAG | + |
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Preference number: 4 (lower is better) Translates to: AKTGSLLAHSVINKDLCKLFEAI*IGNIIK Trigger: CTTGATAATATTTCCTATGCAGATTGCCTCAAACAG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS GCA 90 bp | CATGAGGTGGGCTATCCCTATCGCCGGAGGAGGATTCCTGCCGCCTaGGGGCGCCACGGGCAGCCCGAGGCCGGAGCGGCAGTGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: HEVGYPYRRRRIPAA*GRHGQPEAGAAVPG Trigger: GCCTGGCACTGCCGCTCCGGCCTCGGGCTGCCCGTGGCGCCCGCAGGCGGCAGGAATCCTCCTCCGGCGATAGGGATAGCCCACCTCATG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS TCA 90 bp | GCAGCAGACGAGTGCGCGCACCAGCGCCATGGAGGGCCGCGGGGCTaGCCTGGAGGTTCGGGCTGTCCCGCAGCTCCACTCGGACCGTCA | + |
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Preference number: 5 (lower is better) Translates to: AADECAHQRHGGPRG*PGGSGCPAAPLGPS Trigger: TGACGGTCCGAGTGGAGCTGCGGGACAGCCCGAACCTCCAGGTCAGCCCCGCGGCCCTCCATGGCGCTGGTGCGCGCACTCGTCTGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS GCA 90 bp | CACATGCCAAAACTGTCCTATCGCCGGAGGAGGATTCCTGCCGCCTaGGGGCGCCACGGGCAGCCCGAGGCCGGAGCGGCAGTGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: HMPKLSYRRRRIPAA*GRHGQPEAGAAVPG Trigger: GCCTGGCACTGCCGCTCCGGCCTCGGGCTGCCCGTGGCGCCCGCAGGCGGCAGGAATCCTCCTCCGGCGATAGGACAGTTTTGGCATGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000487215.1 |
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| CDS GCA 90 bp | ACTCGGACCGTCAGGCCTGAGGGTGAGGCGGAGACAGAAGACGGCTaGGGGTGTAGACGTCCGACTGATCACGTGCAAAGGCAGATTCCG | + |
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Preference number: 5 (lower is better) Translates to: TRTVRPEGEAETEDG*GCRRPTDHVQRQIP Trigger: CGGAATCTGCCTTTGCACGTGATCAGTCGGACGTCTACACCCGCAGCCGTCTTCTGTCTCCGCCTCACCCTCAGGCCTGACGGTCCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS GCA 90 bp | CGGAGACAGAAGACGGCTGCGGGTGTAGACGTCCGACTGATCACGTaGAAAGGCAGATTCCGCAGCGAGTCAGTTCGCCTGACCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRQKTAAGVDVRLIT*KGRFRSESVRLTFS Trigger: GCTGAAGGTCAGGCGAACTGACTCGCTGCGGAATCTGCCTTTGCACGTGATCAGTCGGACGTCTACACCCGCAGCCGTCTTCTGTCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS TCA 90 bp | AACATCTCCAAAAGGGCCAGGGTTGGAGGCATTTGCACCTTTAGATaGAGCACACACTTTTGTGTGGTCATCTGTGATGTGGTAAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: NISKRARVGGICTFR*STHFCVVICDVVSR Trigger: CCTACTTACCACATCACAGATGACCACACAAAAGTGTGTGCTTCATCTAAAGGTGCAAATGCCTCCAACCCTGGCCCTTTTGGAGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000487215.1 |
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| CDS CCA 90 bp | CTTCAATGTCGTAGGTCTGGGTCAGGATATACTCCAGCTTCCAGATaGACTCTCCCTTTAGATTCGCCTCTGTCAGATTCAAGTAATACT | + |
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Preference number: 5 (lower is better) Translates to: LQCRRSGSGYTPASR*TLPLDSPLSDSSNT Trigger: AGTATTACTTGAATCTGACAGAGGCGAATCTAAAGGGAGAGTCCATCTGGAAGCTGGAGTATATCCTGACCCAGACCTACGACATTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS TCA 90 bp | GATGGTGGTTGTCATATTAGTGATCACATTTATAACAGTGTCTGTTaGGAGTTCAGGTACAGGAACATGAGGTGGGCTATCCCCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: DGGCHISDHIYNSVC*EFRYRNMRWAIPCP Trigger: TGGACAGGGGATAGCCCACCTCATGTTCCTGTACCTGAACTCTCAACAGACACTGTTATAAATGTGATCACTAATATGACAACCACCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000487215.1 |
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| CDS TCA 90 bp | GATGGTGGTTGTCATATTAGTGATCACATTTATAACAGTGTCTGTTaGGAGTTCAGGTACAGGAACATGAGGTGGGCTATCCCTATCGCC | + |
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Preference number: 5 (lower is better) Translates to: DGGCHISDHIYNSVC*EFRYRNMRWAIPIA Trigger: GGCGATAGGGATAGCCCACCTCATGTTCCTGTACCTGAACTCTCAACAGACACTGTTATAAATGTGATCACTAATATGACAACCACCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS CCA 90 bp | TGGCCAATAGTCATGATTACCCAGCGCAGGGAAAACCTGGAGATTTaGAAAGAGACTCTGGATGGTGGTTGTCATATTAGTGATCACATT | + |
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Preference number: 5 (lower is better) Translates to: WPIVMITQRRENLEI*KETLDGGCHISDHI Trigger: AATGTGATCACTAATATGACAACCACCATCCAGAGTCTCTTTCCAAATCTCCAGGTTTTCCCTGCGCTGGGTAATCATGACTATTGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368440.5 ENST00000487215.1 ENST00000539041.5 |
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| CDS CCA 90 bp | TCTGCTGAGAGTTGTTCAATGTACTTTCTAGCCATTCAAACTGGTTaGCTGGGTCAGTCTTGTTCAGTGTCATTATATTTGGGCCGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SAESCSMYFLAIQTG*LGQSCSVSLYLGRS Trigger: ACTACGGCCCAAATATAATGACACTGAACAAGACTGACCCAGCCAACCAGTTTGAATGGCTAGAAAGTACATTGAACAACTCTCAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACCAAAAGGGCCAGGGTaGGAGGCATTTGCACCTTTA | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKPKGPG*EAFAPL Trigger: TAAAGGTGCAAATGCCTCCAACCCTGGCCCTTTTGG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368440.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGGTGACTACAGGCAGTaGATCCTGTGGCCAATAGTC | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKGDYRQ*ILWPIV Trigger: GACTATTGGCCACAGGATCAACTGCCTGTAGTCACC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAAGCCATTCAAACTGGTaGGCTGGGTCAGTCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSHSNW*AGSVLF Trigger: GAACAAGACTGACCCAGCCAACCAGTTTGAATGGCT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGGAAAACCTGGAGATTaGGAAAGAGACTCTGGATGG | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKGKPGD*ERDSGW Trigger: CCATCCAGAGTCTCTTTCCAAATCTCCAGGTTTTCC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAAGGTTTGCTACTGCATaGTACACTTTACTGGTGACT | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKRFATA*YTLLVT Trigger: AGTCACCAGTAAAGTGTACAATGCAGTAGCAAACCT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAATGGTTTCCAGAGGTTaGCTACTGCATTGTACACTT | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKMVSRG*LLHCTL Trigger: AAGTGTACAATGCAGTAGCAAACCTCTGGAAACCAT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAGTATCAGTGGTGCAGTaGATGTCAAACACTGACATA | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKVSVVQ*MSNTDI Trigger: TATGTCAGTGTTTGACATCAACTGCACCACTGATAC...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATCAGTGTCATTATATTaGGGCCGTAGTACAAGTTTG | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSVSLY*GRSTSL Trigger: CAAACTTGTACTACGGCCCAAATATAATGACACTGA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAATTGGCTGGGTCAGTCTaGTTCAGTGTCATTATATTT | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKLAGSV*FSVIIF Trigger: AAATATAATGACACTGAACAAGACTGACCCAGCCAA...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAAGTGTGTCCATAAAATaGTCCTGCAATGACATCACT | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSVSIK*SCNDIT Trigger: AGTGATGTCATTGCAGGACAATTTTATGGACACACT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAACTGATACCAGGATTGTaGGTCTGTTTTTCTAAAACA | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKLIPGL*VCFSKT Trigger: TGTTTTAGAAAAACAGACCAACAATCCTGGTATCAG...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGACAGGAAGTCTACTTGCCCACTCAGTAATTAACAAAGATTTATGTAAAAGTCTGATACCAGGATaGTTGGTCTGTTTTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: AKTGSLLAHSVINKDLCKSLIPG*LVCFSK Trigger: TTTAGAAAAACAGACCAACAATCCTGGTATCAGACT...TTTACATAAATCTTTGTTAATTACTGAGTGGGCAAGTAGACTTCCTGTCTTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS TCA 72 bp | GAGTGCGCGCACCAGCGCCATGGAGGGCCGCGGGGCTaGCCTGGAGGTTCGGGCTGTCCCGCAGCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: ECAHQRHGGPRG*PGGSGCPAAPL Trigger: GAGTGGAGCTGCGGGACAGCCCGAACCTCCAGGTCAGCCCCGCGGCCCTCCATGGCGCTGGTGCGCGCACTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368440.5 ENST00000487215.1 ENST00000539041.5 |
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| CDS CCA 72 bp | TCAGCAGGCAGCAGACGAGTGCGCGCACCAGCGCCATaGAGGGCCGCGGGGCTGACCTGGAGGTTCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SAGSRRVRAPAP*RAAGLTWRFGL Trigger: CAGCCCGAACCTCCAGGTCAGCCCCGCGGCCCTCCATGGCGCTGGTGCGCGCACTCGTCTGCTGCCTGCTGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368440.5 ENST00000487215.1 ENST00000539041.5 |
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| CDS GCA 72 bp | CATGCCAAAACTGTCCTATCGCCGGAGGAGGATTCCTaGCGCCTGCGGGCGCCACGGGCAGCCCGAGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: HAKTVLSPEEDS*RLRAPRAARGR Trigger: CCGGCCTCGGGCTGCCCGTGGCGCCCGCAGGCGGCAGGAATCCTCCTCCGGCGATAGGACAGTTTTGGCATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000487215.1 |
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| CDS GCA 72 bp | AAGACGGCTGCGGGTGTAGACGTCCGACTGATCACGTaGAAAGGCAGATTCCGCAGCGAGTCAGTTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: KTAAGVDVRLIT*KGRFRSESVRL Trigger: CAGGCGAACTGACTCGCTGCGGAATCTGCCTTTGCACGTGATCAGTCGGACGTCTACACCCGCAGCCGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS TCA 72 bp | ATAACAGTGTCTGTTGAGAGTTCAGGTACAGGAACATaGGGTGGGCTATCCCTATCGCCGGAGGAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: ITVSVESSGTGT*GGLSLSPEEDS Trigger: GGAATCCTCCTCCGGCGATAGGGATAGCCCACCTCATGTTCCTGTACCTGAACTCTCAACAGACACTGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539041.5 |
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| CDS CCA 72 bp | CGTAGGTCTGGGTCAGGATATACTCCAGCTTCCAGATaGACTCTCCCTTTAGATTCGCCTCTGTCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: RRSGSGYTPASR*TLPLDSPLSDS Trigger: TGAATCTGACAGAGGCGAATCTAAAGGGAGAGTCCATCTGGAAGCTGGAGTATATCCTGACCCAGACCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS TCA 72 bp | AAAAGGGCCAGGGTTGGAGGCATTTGCACCTTTAGATaGAGCACACACTTTTGTGTGGTCATCTGTGATGTG | + |
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Preference number: 6 (lower is better) Translates to: KRARVGGICTFR*STHFCVVICDV Trigger: CACATCACAGATGACCACACAAAAGTGTGTGCTTCATCTAAAGGTGCAAATGCCTCCAACCCTGGCCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000487215.1 |
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| CDS TCA 72 bp | TCCAGAGGTTTGCTACTGCATTGTACACTTTACTGGTaGCTACAGGCAGTTGATCCTGTGGCCAATAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRGLLLHCTLYW*LQAVDPVANSH Trigger: ATGACTATTGGCCACAGGATCAACTGCCTGTAGTCACCAGTAAAGTGTACAATGCAGTAGCAAACCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS TCA 72 bp | ATAACAGTGTCTGTTGAGAGTTCAGGTACAGGAACATaGGGTGGGCTATCCCCTGTCCATATCATGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ITVSVESSGTGT*GGLSPVHIMKD Trigger: ATCTTTCATGATATGGACAGGGGATAGCCCACCTCATGTTCCTGTACCTGAACTCTCAACAGACACTGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000487215.1 |
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| CDS TCA 72 bp | TGTCATATTAGTGATCACATTTATAACAGTGTCTGTTaGGAGTTCAGGTACAGGAACATGAGGTGGGCTATC | + |
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Preference number: 6 (lower is better) Translates to: CHISDHIYNSVC*EFRYRNMRWAI Trigger: GATAGCCCACCTCATGTTCCTGTACCTGAACTCTCAACAGACACTGTTATAAATGTGATCACTAATATGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368440.5 ENST00000487215.1 ENST00000539041.5 |
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| CDS CAA 72 bp | CTTTTACAGTCCCCGAAGTACTTGTCTTTGCCTTTCTaGATGGTTAGGATTAAGACCATATTCTCCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: LLQSPKYLSLPF*MVRIKTIFSLY Trigger: ATAGAGGGAGAATATGGTCTTAATCCTAACCATCAAGAAAGGCAAAGACAAGTACTTCGGGGACTGTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487215.1 |
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| CDS TCA 72 bp | TTTTACAGTCCCCGAAGTACTTGTCTTTGCCTTTCTTaGTGGTTAGGATTAAGACCATATTCTCCCTCTATA | + |
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Preference number: 6 (lower is better) Translates to: FYSPRSTCLCLS*WLGLRPYSPSI Trigger: TATAGAGGGAGAATATGGTCTTAATCCTAACCATCAAGAAAGGCAAAGACAAGTACTTCGGGGACTGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487215.1 |
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| CDS CCA 72 bp | AGTTGTTCAATGTACTTTCTAGCCATTCAAACTGGTTaGCTGGGTCAGTCTTGTTCAGTGTCATTATATTTG | + |
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Preference number: 6 (lower is better) Translates to: SCSMYFLAIQTG*LGQSCSVSLYL Trigger: CAAATATAATGACACTGAACAAGACTGACCCAGCCAACCAGTTTGAATGGCTAGAAAGTACATTGAACAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS CAA 72 bp | GAGTTGTTCAATGTACTTTCTAGCCATTCAAACTGGTaGGCTGGGTCAGTCTTGTTCAGTGTCATTATATTT | + |
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Preference number: 6 (lower is better) Translates to: ELFNVLSSHSNW*AGSVLFSVIIF Trigger: AAATATAATGACACTGAACAAGACTGACCCAGCCAACCAGTTTGAATGGCTAGAAAGTACATTGAACAACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS TCA 72 bp | ACATGTGCTATGATATACACCTTCTCCTTATTCTGCTaGGAGTTGTTCAATGTACTTTCTAGCCATTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TCAMIYTFSLFC*ELFNVLSSHSN Trigger: GTTTGAATGGCTAGAAAGTACATTGAACAACTCTCAGCAGAATAAGGAGAAGGTGTATATCATAGCACATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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| CDS GCA 72 bp | TCTGAAAGGCCTTACATGTCTTATCACATGTTACACTaGTGTCATAACTCACAAAGAAGTAATTGTAGTATT | + |
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Preference number: 6 (lower is better) Translates to: SERPYMSYHMLH*CHNSQRSNCSI Trigger: AATACTACAATTACTTCTTTGTGAGTTATGACAGCAGTGTAACATGTGATAAGACATGTAAGGCCTTTCAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368440.5 ENST00000539041.5 |
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