Pregenerated sensors for SMPD4 (Homo sapiens)
Ensembl gene IDs: ENSG00000136699Ensembl transcript IDs: ENST00000409031.5, ENST00000412570.5, ENST00000433118.5, ENST00000454468.5, ENST00000680810.1, ENST00000680987.1, ENST00000681660.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGGACAGCAGCCCGTTTaGACTCCTCCAGGGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLGQQPV*TPPGGW Trigger: CCAGCCCCCTGGAGGAGTTCAAACGGGCTGCTGTCC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680987.1 |
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3UTR-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGTATGGCTGGTGTCCTaGGAGGTGGTGAGGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQVWLVS*EVVRGW Trigger: CCAGCCCCTCACCACCTCCCAGGACACCAGCCATAC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412570.5 ENST00000454468.5 |
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3UTR-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGTGGCAGCTACTCCTTTaGTGGGGCCCACCTGCCTTC | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQWQLLL*WGPPAF Trigger: GAAGGCAGGTGGGCCCCAGCAAAGGAGTAGCTGCCA...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGCAATGGCTTGGGGTCTaGGGTGAAGCCCCTGGGCTC | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLQWLGV*GEAPGL Trigger: GAGCCCAGGGGCTTCACCGCAGACCCCAAGCCATTG...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGTATGGCTGGTGTCCTaGGAGGTGGTGAGGGGCTGG | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLVWLVS*EVVRGW Trigger: CCAGCCCCTCACCACCTCCCAGGACACCAGCCATAC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412570.5 ENST00000454468.5 |
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3UTR-3UTR TCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGACAGAGCGTAGCTGTTaGGCCCTGGCAGCTACTCCT | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQTERSC*ALAATP Trigger: AGGAGTAGCTGCCAGGGCTCAACAGCTACGCTCTGT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGTGGCAGCTACTCCTTTaGTGGGGCCCACCTGCCTTC | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLWQLLL*WGPPAF Trigger: GAAGGCAGGTGGGCCCCAGCAAAGGAGTAGCTGCCA...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAACACCATGAGCGCGTaGTTGGGGCTGACCAGGTCT | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQNTMSA*LGLTRS Trigger: AGACCTGGTCAGCCCCAAGCACGCGCTCATGGTGTT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR TCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGACAGAGCGTAGCTGTTaGGCCCTGGCAGCTACTCCT | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLTERSC*ALAATP Trigger: AGGAGTAGCTGCCAGGGCTCAACAGCTACGCTCTGT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR TCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGAACGCCCCTCACAGTaGAGAATCAGGACAGCCACT | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQERPSQ*RIRTAT Trigger: AGTGGCTGTCCTGATTCTTCACTGTGAGGGGCGTTC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAACACCATGAGCGCGTaGTTGGGGCTGACCAGGTCT | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLNTMSA*LGLTRS Trigger: AGACCTGGTCAGCCCCAAGCACGCGCTCATGGTGTT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGGCGTGAACGACTCCTaGTCCTCATCCTGGACACAG | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLGVNDS*SSSWTQ Trigger: CTGTGTCCAGGATGAGGAGCAGGAGTCGTTCACGCC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680987.1 |
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3UTR-3UTR TCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGAACGCCCCTCACAGTaGAGAATCAGGACAGCCACT | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLERPSQ*RIRTAT Trigger: AGTGGCTGTCCTGATTCTTCACTGTGAGGGGCGTTC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR TCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGACAGGAAGTGGCTTCTaGGTGATGAGGCTCAAGGCA | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQTGSGF*VMRLKA Trigger: TGCCTTGAGCCTCATCACTCAGAAGCCACTTCCTGT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412570.5 ENST00000454468.5 |
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3UTR-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGCTCCTGGACAAAGGGTaGCCATTTCTCCGACACACA | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQLLDKG*PFLRHT Trigger: TGTGTGTCGGAGAAATGGGCACCCTTTGTCCAGGAG...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGCCGAGACCATGTCAATaGATTCCAGCCTGGGCAACG | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLPRPCQ*IPAWAT Trigger: CGTTGCCCAGGCTGGAATGCATTGACATGGTCTCGG...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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3UTR-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGAGGGACACAGGAAGTaGCTTCTGAGTGATGAGGCT | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQEGHRK*LLSDEA Trigger: AGCCTCATCACTCAGAAGCCACTTCCTGTGTCCCTC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412570.5 ENST00000454468.5 |
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3UTR-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGCAGAACCTCCAGCTTaGCATGAGGGGACTGCATTT | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQAEPPA*HEGTAF Trigger: AAATGCAGTCCCCTCATGCCAAGCTGGAGGTTCTGC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433118.5 ENST00000454468.5 |
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3UTR-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGCTCCTGGACAAAGGGTaGCCATTTCTCCGACACACA | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLLLDKG*PFLRHT Trigger: TGTGTGTCGGAGAAATGGGCACCCTTTGTCCAGGAG...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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3UTR-3UTR TCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAGCTACTCAAGAGGCTaGGGCAGAAGAATCACTTCA | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLSYSRG*GRRITS Trigger: TGAAGTGATTCTTCTGCCTCAGCCTCTTGAGTAGCT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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3UTR-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAACCAACTTCATCATTaGGCCACCAGGGTCGAGAAA | + |
Preference number: 2 (lower is better) Translates to: AQGECELPELRFAEPEYLNQLHH*ATRVEK Trigger: TTTCTCGACCCTGGTGGCCCAATGATGAAGTTGGTT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412570.5 |
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3UTR-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAGAATCACTTCAATCTaGGAGGTGGAGATTGCAGTG | + |
Preference number: 2 (lower is better) Translates to: GECELPELRFAEPEYLAQRITSI*EVEIAV Trigger: CACTGCAATCTCCACCTCCCAGATTGAAGTGATTCT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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3UTR-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGGGACAGCAGCCCGTTaGAACTCCTCCAGGGGGCTG | + |
Preference number: 3 (lower is better) Translates to: GECELPELRFAEPEYLAQGTAAR*NSSRGL Trigger: CAGCCCCCTGGAGGAGTTCAAACGGGCTGCTGTCCC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680987.1 |
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3UTR-3UTR CAA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGGGACAGCAGCCCGTTaGAACTCCTCCAGGGGGCTG | + |
Preference number: 3 (lower is better) Translates to: AQGECELPELRFAEPEYLGTAAR*NSSRGL Trigger: CAGCCCCCTGGAGGAGTTCAAACGGGCTGCTGTCCC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680987.1 |
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3UTR-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAGGCGTGAACGACTCTaGGTAGGCGTGGAGGGCCTG | + |
Preference number: 3 (lower is better) Translates to: GECELPELRFAEPEYLAQRRERL*VGVEGL Trigger: CAGGCCCTCCACGCCTACCAAGAGTCGTTCACGCCT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454468.5 |
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3UTR-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGGAGTGAGACTCCATTaGGTAGGCGTGGAGGGCCTG | + |
Preference number: 3 (lower is better) Translates to: GECELPELRFAEPEYLAQGVRLH*VGVEGL Trigger: CAGGCCCTCCACGCCTACCAAATGGAGTCTCACTCC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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3UTR-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAAACCAACTTCATCATaGGGCCACCAGGGTCGAGAA | + |
Preference number: 3 (lower is better) Translates to: GECELPELRFAEPEYLAQKPTSS*GHQGRE Trigger: TTCTCGACCCTGGTGGCCCAATGATGAAGTTGGTTT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412570.5 |
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CDS-3UTR TCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGGACAGCAGCCCGTTTaGACTCCTCCAGGGGGCTGG | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQGQQPV*TPPGGW Trigger: CCAGCCCCCTGGAGGAGTTCAAACGGGCTGCTGTCC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGCAATGGCTTGGGGTCTaGGGTGAAGCCCCTGGGCTC | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQQWLGV*GEAPGL Trigger: GAGCCCAGGGGCTTCACCGCAGACCCCAAGCCATTG...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGTGAACTGCCTGAGCTaGGCTTCGCTGAGCCGGAAT | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQVNCLS*ASLSRN Trigger: ATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCAC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAAGGCGAGTGTGAACTaGCTGAGCTGCGCTTCGCTG | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQKASVN*LSCASL Trigger: CAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAGCCCATTGATGATCTaGTACCGCCCCAGGGGCGTA | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQSPLMI*YRPRGV Trigger: TACGCCCCTGGGGCGGTACCAGATCATCAATGGGCT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGTGAACTGCCTGAGCTaGGCTTCGCTGAGCCGGAAT | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLVNCLS*ASLSRN Trigger: ATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCAC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAAGGCGAGTGTGAACTaGCTGAGCTGCGCTTCGCTG | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLKASVN*LSCASL Trigger: CAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGCCGAGACCATGTCAATaGATTCCAGCCTGGGCAACG | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQPRPCQ*IPAWAT Trigger: CGTTGCCCAGGCTGGAATGCATTGACATGGTCTCGG...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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CDS-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAGCCCATTGATGATCTaGTACCGCCCCAGGGGCGTA | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLSPLMI*YRPRGV Trigger: TACGCCCCTGGGGCGGTACCAGATCATCAATGGGCT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR TCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGACAGGAAGTGGCTTCTaGGTGATGAGGCTCAAGGCA | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLTGSGF*VMRLKA Trigger: TGCCTTGAGCCTCATCACTCAGAAGCCACTTCCTGT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412570.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGGGTGTGCAGCTCCTTTaGTGGAAAGTCCTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQGVQLL*WKVLND Trigger: GTCATTGAGGACTTTCCAGCAAAGGAGCTGCACACC...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGCATGGGAAGATGGTGTaGAGCTCCTTTGCTGGAAAG | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQHGKMV*SSFAGK Trigger: CTTTCCAGCAAAGGAGCTGCACACCATCTTCCCATG...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGAGGGACACAGGAAGTaGCTTCTGAGTGATGAGGCT | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLEGHRK*LLSDEA Trigger: AGCCTCATCACTCAGAAGCCACTTCCTGTGTCCCTC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412570.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGTGTCCTGCAAATCTGTaGTTGATGGCAGACGACAGC | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQCPANL*LMADDS Trigger: GCTGTCGTCTGCCATCAACCACAGATTTGCAGGACA...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCAGAACCTCCAGCTTaGCATGAGGGGACTGCATTT | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLAEPPA*HEGTAF Trigger: AAATGCAGTCCCCTCATGCCAAGCTGGAGGTTCTGC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGGTGTGCAGCTCCTTTaGTGGAAAGTCCTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLGVQLL*WKVLND Trigger: GTCATTGAGGACTTTCCAGCAAAGGAGCTGCACACC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGCATGGGAAGATGGTGTaGAGCTCCTTTGCTGGAAAG | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLHGKMV*SSFAGK Trigger: CTTTCCAGCAAAGGAGCTGCACACCATCTTCCCATG...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR GCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGCGAGGACACCATCTTTaGTGGAAAGTCCTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQRGHHL*WKVLND Trigger: GTCATTGAGGACTTTCCAGCAAAGATGGTGTCCTCG...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412570.5 |
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CDS-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAACCAACTTCATCATTaGGCCACCAGGGTCGAGAAA | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQNQLHH*ATRVEK Trigger: TTTCTCGACCCTGGTGGCCCAATGATGAAGTTGGTT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412570.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGTGTCCTGCAAATCTGTaGTTGATGGCAGACGACAGC | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLCPANL*LMADDS Trigger: GCTGTCGTCTGCCATCAACCACAGATTTGCAGGACA...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAGCAAAGGGTATGGCTaGTGTCCTTTGCTGGAAAGT | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQSKGYG*CPLLES Trigger: ACTTTCCAGCAAAGGACACCAGCCATACCCTTTGCT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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CDS-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGATGGCTGGTGTCCTTTaGTGGAAAGTCCTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLMAGVL*WKVLND Trigger: GTCATTGAGGACTTTCCAGCAAAGGACACCAGCCAT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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CDS-3UTR GCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGATCATTGGGCCACTTTaGTGGAAAGTCCTCAATGAC | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLIIGPL*WKVLND Trigger: GTCATTGAGGACTTTCCAGCAAAGTGGCCCAATGAT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454468.5 |
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CDS-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAGAATCACTTCAATCTaGGAGGTGGAGATTGCAGTG | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLRITSI*EVEIAV Trigger: CACTGCAATCTCCACCTCCCAGATTGAAGTGATTCT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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CDS-3UTR CCA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGATTGGGCCACTTTGCTaGAAAGTCCTCAATGACTTT | + |
Preference number: 4 (lower is better) Translates to: GECELPELRFAEPEYLAQIGPLC*KVLNDF Trigger: AAAGTCATTGAGGACTTTCCAGCAAAGTGGCCCAAT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454468.5 |
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CDS-3UTR CCA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGGACACCATCTTTGCTaGAAAGTCCTCAATGACTTT | + |
Preference number: 4 (lower is better) Translates to: AQGECELPELRFAEPEYLGHHLC*KVLNDF Trigger: AAAGTCATTGAGGACTTTCCAGCAAAGATGGTGTCC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412570.5 |
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CDS TCA 90 bp | TCCGCCATGCCACTCCCGGCTCCTAGAGCGCCGCTCAGCACACCGTaGGCGCCCAATAACTGTTGGGCTTCAATGACGCCGCGGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: SAMPLPAPRAPLSTP*APNNCWASMTPRRR Trigger: CCGCCTCCGCGGCGTCATTGAAGCCCAACAGTTATTGGGCGCTCACGGTGTGCTGAGCGGCGCTCTAGGAGCCGGGAGTGGCATGGCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409031.5 |
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CDS-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGCTGTTGCCCAGGGACTaGGTAGGCGTGGAGGGCCTG | + |
Preference number: 5 (lower is better) Translates to: GECELPELRFAEPEYLAQLLPRD*VGVEGL Trigger: CAGGCCCTCCACGCCTACCAAGTCCCTGGGCAACAG...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000680987.1 |
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CDS-3UTR CAA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAGGCGTGAACGACTCTaGGTAGGCGTGGAGGGCCTG | + |
Preference number: 5 (lower is better) Translates to: AQGECELPELRFAEPEYLRRERL*VGVEGL Trigger: CAGGCCCTCCACGCCTACCAAGAGTCGTTCACGCCT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000454468.5 ENST00000680810.1 |
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CDS-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAACCTTCGCAGCCCATaGATGATCTGGTACCGCCCC | + |
Preference number: 5 (lower is better) Translates to: GECELPELRFAEPEYLAQNLRSP*MIWYRP Trigger: GGGGCGGTACCAGATCATCAATGGGCTGCGAAGGTT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CAA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGGAGTGAGACTCCATTaGGTAGGCGTGGAGGGCCTG | + |
Preference number: 5 (lower is better) Translates to: AQGECELPELRFAEPEYLGVRLH*VGVEGL Trigger: CAGGCCCTCCACGCCTACCAAATGGAGTCTCACTCC...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433118.5 |
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CDS-3UTR CAA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAACCTTCGCAGCCCATaGATGATCTGGTACCGCCCC | + |
Preference number: 5 (lower is better) Translates to: AQGECELPELRFAEPEYLNLRSP*MIWYRP Trigger: GGGGCGGTACCAGATCATCAATGGGCTGCGAAGGTT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412570.5 ENST00000433118.5 ENST00000454468.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CAA 90 bp | GCCCAAGGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGAAACCAACTTCATCATaGGGCCACCAGGGTCGAGAA | + |
Preference number: 5 (lower is better) Translates to: AQGECELPELRFAEPEYLKPTSS*GHQGRE Trigger: TTCTCGACCCTGGTGGCCCAATGATGAAGTTGGTTT...CAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412570.5 ENST00000680810.1 ENST00000680987.1 |
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CDS-3UTR CAA 90 bp | GGCGAGTGTGAACTGCCTGAGCTGCGCTTCGCTGAGCCGGAATATCTGGCGCAGAAACCAACTTCATCATaGGGCCACTTTGCTGGAAAG | + |
Preference number: 5 (lower is better) Translates to: GECELPELRFAEPEYLAQKPTSS*GHFAGK Trigger: CTTTCCAGCAAAGTGGCCCAATGATGAAGTTGGTTT...CTGCGCCAGATATTCCGGCTCAGCGAAGCGCAGCTCAGGCAGTTCACACTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454468.5 |
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CDS TCA 72 bp | CCACTCCCGGCTCCTAGAGCGCCGCTCAGCACACCGTaGGCGCCCAATAACTGTTGGGCTTCAATGACGCCG | + |
Preference number: 6 (lower is better) Translates to: PLPAPRAPLSTP*APNNCWASMTP Trigger: CGGCGTCATTGAAGCCCAACAGTTATTGGGCGCTCACGGTGTGCTGAGCGGCGCTCTAGGAGCCGGGAGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409031.5 |
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CDS CCA 72 bp | TTGAAAGAGGCATTTACCGAGCGCCCAATGTATGCCTaGCACTGGGCTGGGTGCTGCCACCTAAGCGAGCAC | + |
Preference number: 6 (lower is better) Translates to: LKEAFTERPMYA*HWAGCCHLSEH Trigger: GTGCTCGCTTAGGTGGCAGCACCCAGCCCAGTGCCAGGCATACATTGGGCGCTCGGTAAATGCCTCTTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409031.5 |
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CDS CAA 72 bp | CAAAGGGTATGGCTGGTGTCCTGTAGTCCCAGCTACTaGGGACTGAGCCAGGAGAATCACTTGAAGCAGAGA | + |
Preference number: 6 (lower is better) Translates to: QRVWLVSCSPSY*GLSQENHLKQR Trigger: TCTCTGCTTCAAGTGATTCTCCTGGCTCAGTCCCAAGTAGCTGGGACTACAGGACACCAGCCATACCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681660.1 |