RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMPD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166311

Ensembl transcript IDs: ENST00000342245.9, ENST00000526280.1, ENST00000527275.5, ENST00000530395.1, ENST00000531303.5, ENST00000531336.1, ENST00000532367.1, ENST00000533123.5, ENST00000533196.1, ENST00000534405.5

Found 625 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCAGGTGGCGGCACAGAGCAGGGCTGTCAGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCC +
Preference number: 1 (lower is better)
Translates to: IRWRHRAGLSARAES*AQRVARRQGVPQGS
Trigger: GGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCCTGCTCTGTGCCGCCACCTGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 90 bp CAGACTGGCAGCATCAGGTCGCAGCAGCAGTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCA +
Preference number: 1 (lower is better)
Translates to: QTGSIRSQQQYRVPG*AAQAWGDSSCLVCP
Trigger: TGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGCTGCTGCGACCTGATGCTGCCAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR GCA 90 bp CCTGGCTGGGCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAA +
Preference number: 1 (lower is better)
Translates to: PGWAAQAWGDSSCLV*PGQCQLRPLLHGCE
Trigger: TTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGCCCAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR CCA 90 bp ACTTTCCCAAATGTGGGCCCTGGGGCCCTAGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCAG +
Preference number: 1 (lower is better)
Translates to: TFPNVGPGALAKQWP*PQALGLWEAPIWHQ
Trigger: CTGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 90 bp TTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTG +
Preference number: 1 (lower is better)
Translates to: LTDWQHQVAAAVQGS*LGSTGLGRQLLSCL
Trigger: CAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR GCA 90 bp TGTGGGGCTGACAGGATTAAGGCCGATGTAGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATC +
Preference number: 1 (lower is better)
Translates to: CGADRIKADVGSCTG*QEGYSQRPAQSLFI
Trigger: GATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTACATCGGCCTTAATCCTGTCAGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
3UTR TCA 90 bp ATGTGGCCAATTATATGCACTTTGTCTCCTCGATCCTCAGCAGCCTaGAGCTCCCCCACCAGCCACTGGAGCTGTCCTGCGGGATCCGTG +
Preference number: 1 (lower is better)
Translates to: MWPIICTLSPRSSAA*SSPTSHWSCPAGSV
Trigger: CACGGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGAGCTTCAGGCTGCTGAGGATCGAGGAGACAAAGTGCATATAATTGGCCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR GCA 90 bp CACACGGTAACCAGGATTAAGGCCGATGTAGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATC +
Preference number: 1 (lower is better)
Translates to: HTVTRIKADVGSCTG*QEGYSQRPAQSLFI
Trigger: GATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTACATCGGCCTTAATCCTGGTTACCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR CCA 90 bp ACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAGAAACCAGAAGGTCTGGAAAAGTTG +
Preference number: 1 (lower is better)
Translates to: TKSSQTAGRATGLRG*VALMVEKPEGLEKL
Trigger: CAACTTTTCCAGACCTTCTGGTTTCTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR GCA 90 bp AGCCCTGTAGAGAAGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGATGTAGGTCTCATGGTCCAGGACCAC +
Preference number: 1 (lower is better)
Translates to: SPVEKLPVRYGSRYV*LGQIQDVGLMVQDH
Trigger: GTGGTCCTGGACCATGAGACCTACATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCTTCTCTACAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 90 bp ATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTaGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACA +
Preference number: 1 (lower is better)
Translates to: ILGAQGLVLSPDDLA*LNHSSIWAFSPFPT
Trigger: TGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 90 bp TACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACTTTGTCTCCTCGATCCTC +
Preference number: 1 (lower is better)
Translates to: YNSVIIPAPALQTVP*GNVANYMHFVSSIL
Trigger: GAGGATCGAGGAGACAAAGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR CCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTG +
Preference number: 1 (lower is better)
Translates to: VLSPDDLAWLNHSSI*AFSPFPTSRTFPNV
Trigger: CACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CAAAACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QNSGLGHRLWASGRLPSGAVQGS*LGSTGL
Trigger: CAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGC...GCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAACTTAGGTCCCCCACCAGCCACTaGAGCTGTCCTGCGGGATCC +
Preference number: 2 (lower is better)
Translates to: QAWGDSSCLVCPGQCQLRSPTSH*SCPAGS
Trigger: GGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGA...CCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 2 (lower is better)
Translates to: GRELGTKSSQTAGRATGLTGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...GAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp TGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCAGGTGGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: WPWPQALGLWEAPIWHQVADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...CACCTGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: FPGILGAQGLVLSPDDLAYRVPG*AAQAWG
Trigger: GCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTA...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp TGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTGGGAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTT +
Preference number: 2 (lower is better)
Translates to: WAQRVARRQGVPQGSEGGSSCLV*PGQCQL
Trigger: AAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCT...CCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp GCAAAACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: AKQWPWPQALGLWEAPIWVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...CCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp AGAGCAGGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: RAGLSARAESWAQRVARRAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...CCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCCTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 2 (lower is better)
Translates to: FPGILGAQGLVLSPDDLATGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp GGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 2 (lower is better)
Translates to: GLSARAESWAQRVARRQGMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...GCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGGCAGTCTAGCTCCTaGGCACAGGCAGCCAAACCC +
Preference number: 2 (lower is better)
Translates to: GTGSQTPSHIQLNQLQERRQSSS*AQAAKP
Trigger: GGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCT...CCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp GCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAAGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 2 (lower is better)
Translates to: AAQAWGDSSCLVCPGQCQGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...TTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCTGCCCTGGGGGAATGTaGCCAATTATATGCACTTTG +
Preference number: 2 (lower is better)
Translates to: GLSARAESWAQRVARRQGCPGGM*PIICTL
Trigger: CAAAGTGCATATAATTGGCCACATTCCCCCAGGGCA...GCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 2 (lower is better)
Translates to: GLSARAESWAQRVARRQGRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...GCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp GGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGAGCCCTGTAGAGAAGGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: GGRQCVGQPIGFSSPVEKVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...CTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp GGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 2 (lower is better)
Translates to: GLEKLHVAPHAIYQVVPGQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...GCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp GGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 2 (lower is better)
Translates to: GLEKLHVAPHAIYQVVPGGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...GCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp TCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: SGKVACRPACDIPGCARRADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...CCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCATTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 2 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: VNLGLYSMAVKGQQPQGSAVQGS*LGSTGL
Trigger: CAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGC...ACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCATACCTGGCTACAATCCCCCACCAGCCACTaGAGCTGTCCTGCGGGATCC +
Preference number: 2 (lower is better)
Translates to: HECGQRTEQPGCSHTWLQSPTSH*SCPAGS
Trigger: GGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGA...TTGTAGCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR CAA 90 bp GGGTGGGTGGCCCTTATGGTAGAGAAACCAGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGT +
Preference number: 2 (lower is better)
Translates to: GWVALMVEKPEGLEK*HVAPHAIYQVVPGG
Trigger: ACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCTCTACCATAAGGGCCACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 2 (lower is better)
Translates to: FPGILGAQGLVLSPDDLAGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp ATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGTCTACTCCATGGCTGTaGAAGGACAGCAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: MSPRMRYTRLCQAVGSVLSTPWL*KDSSLK
Trigger: CTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGA...CAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCATCTACTCCATGGCTGTaGAAGGACAGCAGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSSTPWL*KDSSLK
Trigger: CTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGA...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp GTGCCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATCATAGAAGAGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: VPGRLQPAAGSESLHHRRVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...TCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 2 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTCCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 2 (lower is better)
Translates to: SPASLGPRDWFFHRMILPPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...AGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GTGCCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATCATAGAAGATTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 2 (lower is better)
Translates to: VPGRLQPAAGSESLHHRRLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...TCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGCTTTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: LGLYSMAVKGQQPQGSLAFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...AGCTAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCAGGCAGTCTAGCTCCTaGGCACAGGCAGCCAAACCC +
Preference number: 2 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFRQSSS*AQAAKP
Trigger: GGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCT...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGAAVQGS*LGSTGL
Trigger: CAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGC...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 2 (lower is better)
Translates to: PASLGPRDWFFHRMILPGLQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...ACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: GLFHPFLHQELSQMWALGPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 2 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACATGTGGCCAATTATATaGACTTTGTCTCCTCGATCC +
Preference number: 2 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDMWPII*TLSPRS
Trigger: GGATCGAGGAGACAAAGTGCATATAATTGGCCACAT...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp TTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGCTCGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LGLYSMAVKGQQPQGSLARYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...AGCTAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGAACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: PVSPASLGPRDWFFHRMINHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 2 (lower is better)
Translates to: QCQLRPLLHGCERTAASRLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...CCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR TCA 90 bp CCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 2 (lower is better)
Translates to: PNPLPYPAKPAPGKEKVLMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...CAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCTGCCCTGGGGGAATGTaGCCAATTATATGCACTTTG +
Preference number: 2 (lower is better)
Translates to: GLEKLHVAPHAIYQVVPGCPGGM*PIICTL
Trigger: CAAAGTGCATATAATTGGCCACATTCCCCCAGGGCA...GCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: DDLAWLNHSSIWAFSPFPAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CAA 90 bp CTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCA +
Preference number: 2 (lower is better)
Translates to: LGAQGLVLSPDDLAW*NHSSIWAFSPFPTS
Trigger: TGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CAA 90 bp ATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTTCCATCTATTaGGTACACACGGTAACCTGCAAGGATGTGGGGCTGACAGGATTA +
Preference number: 2 (lower is better)
Translates to: MVQDHVRAPGVVSIY*VHTVTCKDVGLTGL
Trigger: TAATCCTGTCAGCCCCACATCCTTGCAGGTTACCGTGTGTACCAAATAGATGGAAACTACTCCGGGAGCTCTCACGTGGTCCTGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
3UTR-3UTR GCA 90 bp GAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGATGTGGCCAATTATATaGACTTTGTCTCCTCGATCC +
Preference number: 2 (lower is better)
Translates to: EKLHVAPHAIYQVVPGGRMWPII*TLSPRS
Trigger: GGATCGAGGAGACAAAGTGCATATAATTGGCCACAT...CCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 2 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGAGCCCTGTAGAGAAGGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 2 (lower is better)
Translates to: GGRQCVGQPIGFSSPVEKGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...CTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 2 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 2 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp CTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGATGTATTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 2 (lower is better)
Translates to: LPVRYGSRYVCLGQIQDVFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...TACATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 2 (lower is better)
Translates to: GLEKLHVAPHAIYQVVPGGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...GCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 2 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCACTGGAGCTGTCCTaGGGGATCCGTGGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFPLELS*GIRGVD
Trigger: ATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGG...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGCCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 2 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCTTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 2 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR GCA 90 bp CAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTT +
Preference number: 2 (lower is better)
Translates to: QVSYLYFNRLAASGRSSSSSCLV*PGQCQL
Trigger: AAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCT...ACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp ATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCATACCTGGCTACAATAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: MSVAKELSSQGVLIPGYNNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...ATTGTAGCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CCA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGTTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 2 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp CAGCAGTACAGGGTTCCTGGCTGGGCAGCACAGGCCTaGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: QQYRVPGWAAQA*GDSSCLVCPGQ
Trigger: CTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp CGGCACAGAGCAGGGCTGTCAGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCA +
Preference number: 3 (lower is better)
Translates to: RHRAGLSARAES*AQRVARRQGVP
Trigger: TGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCCTGCTCTGTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp AGCATCAGGTCGCAGCAGCAGTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGCGACAGCTCCTGTCTT +
Preference number: 3 (lower is better)
Translates to: SIRSQQQYRVPG*AAQAWGDSSCL
Trigger: AAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGCTGCTGCGACCTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 3 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 3 (lower is better)
Translates to: YQVVPGGRQCVGQPIGFSVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...CGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCCTGGCACAACCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGCGACAGCTCCTGTCTaGTCTGCCCAGGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: SPASLGPRDWFFHRMILPATAPV*SAQGSV
Trigger: GACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGC...AGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR GCA 72 bp GCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTTAGGCCTCTACTCCAT +
Preference number: 3 (lower is better)
Translates to: AAQAWGDSSCLV*PGQCQLRPLLH
Trigger: ATGGAGTAGAGGCCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp GCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 3 (lower is better)
Translates to: AESWAQRVARRQGVPQGSEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...GGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp CAGGGCAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 3 (lower is better)
Translates to: QGSVNLGLYSMAVKGQQPVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...AGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR GCA 72 bp AGCCTGAAGCTCCCCCACCAGCCACTGGAGCTGTCCTaGGGGATCCGTGGAGTTGATCAAGAGCCAGAAGTT +
Preference number: 3 (lower is better)
Translates to: SLKLPHQPLELS*GIRGVDQEPEV
Trigger: AACTTCTGGCTCTTGATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGAGCTTCAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR GCA 72 bp ACCAGGATTAAGGCCGATGTAGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGT +
Preference number: 3 (lower is better)
Translates to: TRIKADVGSCTG*QEGYSQRPAQS
Trigger: ACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTACATCGGCCTTAATCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR GCA 72 bp GACAGGATTAAGGCCGATGTAGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGT +
Preference number: 3 (lower is better)
Translates to: DRIKADVGSCTG*QEGYSQRPAQS
Trigger: ACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTACATCGGCCTTAATCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531303.5
3UTR-3UTR CAA 90 bp TTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGCTGCGACAGCTCCTGTCTaGTCTGCCCAGGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: LGLYSMAVKGQQPQGSLAATAPV*SAQGSV
Trigger: GACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGC...AGCTAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp ATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: MSPRMRYTRLCQAVGSVLAGSVE*IKSQKF
Trigger: GAACTTCTGGCTCTTGATCAACTCCACGGATCCCGC...CAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp CCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 3 (lower is better)
Translates to: PGHRQPNPLPYPAKPAPGEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...TCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp GAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 3 (lower is better)
Translates to: EKVLFPRHPWGPGTGSFTEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...GGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 3 (lower is better)
Translates to: SPASLGPRDWFFHRMILPEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...AGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp GCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGTAGTTTCCATCTATTaGGTACACACGGTAACCTGC +
Preference number: 3 (lower is better)
Translates to: AVSTGRELGTKSSQTAGRVVSIY*VHTVTC
Trigger: GCAGGTTACCGTGTGTACCAAATAGATGGAAACTAC...ACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531303.5
3UTR TCA 72 bp CATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCACAGCAGCATTTGGGC +
Preference number: 3 (lower is better)
Translates to: HPWGPGTGSFTG*SCLVEPQQHLG
Trigger: GCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 3 (lower is better)
Translates to: YQVVPGGRQCVGQPIGFSEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...CGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCCTGGCACAACCTGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp AAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 3 (lower is better)
Translates to: KPAPGKEKVLFPRHPWGPDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...TGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 3 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGCTGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 3 (lower is better)
Translates to: LGLYSMAVKGQQPQGSLAEGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...AGCTAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCAGCAAAACAGTGGCCTaGGCCACAGGCTCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPSKTVA*ATGSGP
Trigger: AGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCT...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR GCA 72 bp GAGAAGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGATGTAGGTCTCATGGTC +
Preference number: 3 (lower is better)
Translates to: EKLPVRYGSRYV*LGQIQDVGLMV
Trigger: GACCATGAGACCTACATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp TTTCTCGAGCCCTGTAGAGAAGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGA +
Preference number: 3 (lower is better)
Translates to: FLEPCREAASAV*LPVCLPGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCTTCTCTACAGGGCTCGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp GCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTaGTTGAACCACAGCAGCATTTGGGCTTTTTCACCC +
Preference number: 3 (lower is better)
Translates to: AQGLVLSPDDLA*LNHSSIWAFSP
Trigger: GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp CATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCATACCTGGCTACAAGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: HECGQRTEQPGCSHTWLQAGSVE*IKSQKF
Trigger: GAACTTCTGGCTCTTGATCAACTCCACGGATCCCGC...TTGTAGCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR CCA 72 bp CAGCTCCAGCTCTTCAGACAGTGCCCTGGGGGAATGTaGCCAATTATATGCACTTTGTCTCCTCGATCCTCA +
Preference number: 3 (lower is better)
Translates to: QLQLFRQCPGGM*PIICTLSPRSS
Trigger: TGAGGATCGAGGAGACAAAGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp CAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 3 (lower is better)
Translates to: QCQLRPLLHGCERTAASRDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...CCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 3 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp CAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTGCGACAGCTCCTGTCTaGTCTGCCCAGGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: QVSYLYFNRLAASGRSSSATAPV*SAQGSV
Trigger: GACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGC...ACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp CCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 3 (lower is better)
Translates to: PAKPAPGKEKVLFPRHPWVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...CCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR GCA 72 bp GGAGTAGTTTCCATCTATTTGGTACACACGGTAACCTaGAAGGATGTGGGGCTGACAGGATTAAGGCCGATG +
Preference number: 3 (lower is better)
Translates to: GVVSIYLVHTVT*KDVGLTGLRPM
Trigger: CATCGGCCTTAATCCTGTCAGCCCCACATCCTTGCAGGTTACCGTGTGTACCAAATAGATGGAAACTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
3UTR-3UTR CAA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 3 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp GTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACTTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: VIIPAPALQTVP*GNVANYMHFVS
Trigger: GGAGACAAAGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
3UTR CCA 72 bp CTGGAGTCCAAGTCTCTTATCTTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCAGCAGTACAGGGTTCC +
Preference number: 3 (lower is better)
Translates to: LESKSLIFILTD*QHQVAAAVQGS
Trigger: GGAACCCTGTACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTGGACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526280.1
ENST00000533123.5
3UTR-3UTR CAA 90 bp GCCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 3 (lower is better)
Translates to: AGSESLHHRRPQIHPHECDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...ACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CCA 72 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCTACATCAAGAACTTTC +
Preference number: 3 (lower is better)
Translates to: PDDLAWLNHSSI*AFSPFPTSRTF
Trigger: GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR-3UTR CAA 90 bp TCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAACCAATTATATGCACTTaGTCTCCTCGATCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: SESLHHRRPQIHPHECGQPIICT*SPRSSA
Trigger: TGCTGAGGATCGAGGAGACAAAGTGCATATAATTGG...TTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR TCA 90 bp ACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTGGGTGGCCTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TKSSQTAGRATGLRGWVASSQVL*RWSGPA
Trigger: TGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGA...GGCCACCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCCCCAGTGCCCACAGGTaGAGCCCAGGAGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NSGLGHRLWASGRLPSGIPSAHR*SPGAGH
Trigger: GTGGCCTGCTCCTGGGCTCCACCTGTGGGCACTGGG...GATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GCAAAACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGTGGGGAGAAAGAGGGTaGGCCTCTGCCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AKQWPWPQALGLWEAPIWWGERG*ASAGAQ
Trigger: CTGGGCTCCGGCAGAGGCTCACCCTCTTTCTCCCCA...CCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAAGGCACCTGGCCGGGATaGGGGCGGCAGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GSLAPGHRQPNPLPYPAKGTWPG*GRQART
Trigger: GGTTCTGGCCTGCCGCCCGCATCCCGGCCAGGTGCC...TTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCCCAGACGGCAGGGCGTaGCACAGGGCTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FPGILGAQGLVLSPDDLAPDGRA*HRAPRV
Trigger: CACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGG...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCCCAGACGGCAGGGCGTaGCACAGGGCTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PVSPASLGPRDWFFHRMIPDGRA*HRAPRV
Trigger: CACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGG...GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATCCAGTATCCGGCACCTaGCCGGGATGCGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDPVSGT*PGCGRQ
Trigger: CTGCCGCCCGCATCCCGGCCAGGTGCCGGATACTGG...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGCAGCTCTGGCGGAGTaGCGCTCCGTAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: APGHRQPNPLPYPAKPAPAALAE*RSVAGH
Trigger: ATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGC...TGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCTGGGGAGAAAGAGGGTaGGCCTCTGCCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPRMRYTRLCQAVGSVLGWGERG*ASAGAQ
Trigger: CTGGGCTCCGGCAGAGGCTCACCCTCTTTCTCCCCA...GCCCAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAGGAAGAGGATGCGGCTaGCAGGGGCACCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGGRGCG*QGHLGL
Trigger: CAGCCCCAGGTGCCCCTGTCAGCCGCATCCTCTTCC...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGGTCCCGTCTTGTCCCTaGTCCCGGCCGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGSQTPSHIQLNQLQERVPSCP*SRPDLG
Trigger: CCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGAC...CCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGAGCCCTGTAGAGAAGGTCCCGTCTTGTCCCTaGTCCCGGCCGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGRQCVGQPIGFSSPVEKVPSCP*SRPDLG
Trigger: CCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGAC...CTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCACCTGGCCGGGATaGGGGCGGCAGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PAKPAPGKEKVLFPRHPWGTWPG*GRQART
Trigger: GGTTCTGGCCTGCCGCCCGCATCCCGGCCAGGTGCC...CCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCACCAGACGGCAGGGCGTaGCACAGGGCTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KPAPGKEKVLFPRHPWGPPDGRA*HRAPRV
Trigger: CACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGG...TGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGACCCAGTGCCCACAGGTaGAGCCCAGGAGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGPSAHR*SPGAGH
Trigger: GTGGCCTGCTCCTGGGCTCCACCTGTGGGCACTGGG...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCACAGGCTCTGGGCCTCTaGGAGGCTCCCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TVALATGSGPLGGSHLASQALGL*EAPIWH
Trigger: ATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTG...TGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTCAGGCTCTGGGCCTCTaGGAGGCTCCCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: AVSTGRELGTKSSQTAGRQALGL*EAPIWH
Trigger: ATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTG...ACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTGGGTGGCCCCCAAATGTGGGCCCTaGGGCCCTAGCAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: TKSSQTAGRATGLRGWVAPKCGP*GPSKTV
Trigger: CACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGG...GGCCACCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCGCAGCTCTGGCGGAGTaGCGCTCCGTAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GAQGLVLSPDDLAWLNHSAALAE*RSVAGH
Trigger: ATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGC...GCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGGCAGCTCTGGCGGAGTaGCGCTCCGTAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLAALAE*RSVAGH
Trigger: ATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGC...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp ACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCAAGATGGGCTCAGCACTaGGCGTCTCCACACCTCCAC +
Preference number: 4 (lower is better)
Translates to: TVALATGSGPLGGSHLASRWAQH*ASPHLH
Trigger: GTGGAGGTGTGGAGACGCTCAGTGCTGAGCCCATCT...TGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGGGAAGAGGATGCGGCTaGCAGGGGCACCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLGRGCG*QGHLGL
Trigger: CAGCCCCAGGTGCCCCTGTCAGCCGCATCCTCTTCC...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDARSWS*RVWCQT
Trigger: TGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGC...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AGAGCAGGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: RAGLSARAESWAQRVARRARSWS*RVWCQT
Trigger: TGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGC...CCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCCTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp ACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTGGGTGGCCGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TKSSQTAGRATGLRGWVAVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...GGCCACCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp ACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGCGGACGATAAGTACCTaGGGGTGCGCAGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: TSSRKGEGPVSPASLGPRRTIST*GCAGLR
Trigger: CCGAAGCCCTGCGCACCCTCAGGTACTTATCGTCCG...CCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526280.1
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGCCACTGGAGCTGTCCTGCGGGATCCGTGGAGTTGATCAAGAGCCAGAAGTTGTCCCGTCTTGTCCCTaGTCCCGGCCGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPLELSCGIRGVDQEPEVVPSCP*SRPDLG
Trigger: CCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGAC...AACTTCTGGCTCTTGATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTGGGCTATGCGATGTAACCTaGCAGGATGGCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WAQRVARRQGVPQGSEGGLCDVT*QDGLGE
Trigger: CTCCCCAAGGCCATCCTGCCAGGTTACATCGCATAG...CCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: GRELGTKSSQTAGRATGLAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...GAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: AVSTGRELGTKSSQTAGRTGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...ACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGCAGCTCTGGCGGAGTaGCGCTCCGTAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VWKSCMSPRMRYTRLCQAAALAE*RSVAGH
Trigger: ATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGC...CGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHADCTA*WPRSPR
Trigger: GCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGC...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: PGHRQPNPLPYPAKPAPGADCTA*WPRSPR
Trigger: GCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGC...TCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTAGATGGGCTCAGCACTaGGCGTCTCCACACCTCCAC +
Preference number: 4 (lower is better)
Translates to: APGKEKVLFPRHPWGPGTRWAQH*ASPHLH
Trigger: GTGGAGGTGTGGAGACGCTCAGTGCTGAGCCCATCT...AGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: PVSPASLGPRDWFFHRMIARSWS*RVWCQT
Trigger: TGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGC...GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SPASLGPRDWFFHRMILPSSQVL*RWSGPA
Trigger: TGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGA...AGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: QERRRSCFPGILGAQGLVSSQVL*RWSGPA
Trigger: TGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGA...AACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GRELGTKSSQTAGRATGLVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...GAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTAAGAGGGTGAGCCTCTaGCGGAGCCCAGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: QERRRSCFPGILGAQGLVKRVSL*RSPENP
Trigger: CGGGTTCTCTGGGCTCCGGCAGAGGCTCACCCTCTT...AACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAGCAGCACAGTGGGTCTaGACAGTCAGGGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGAAQWV*TVRVRA
Trigger: GGCACGGACCCTGACTGTGCAGACCCACTGTGCTGC...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGCCTGAAGCTCCCCCACCAGCCACTGGAGCTGTCCTGCGGGATCCGTGGAGTGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QPEAPPPATGAVLRDPWSVPDIM*GDVSCP
Trigger: TGGACAGGAGACATCCCCGCACATGATGTCTGGCAC...ACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGAGCTTCAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000534405.5
CDS-3UTR GCA 90 bp CAAAACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QNSGLGHRLWASGRLPSGGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...GCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTACCAGACGGCAGGGCGTaGCACAGGGCTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: QIQDVGLMVQDHVRAPGVPDGRA*HRAPRV
Trigger: CACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGG...TACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCTTCCTACACGGGGCTaGTTCGTCTGTCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHLPTRG*FVCPVP
Trigger: GGGGACGGGACAGACGAACCAGCCCCGTGTAGGAAG...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAAAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: AAQAWGDSSCLVCPGQCQRVHWH*PQELPH
Trigger: GTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCT...TTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PAPGKEKVLFPRHPWGPGRVHWH*PQELPH
Trigger: GTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCT...CCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCTCCCCCACCAGCCACTaGAGCTGTCCTGCGGGATCC +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFSPTSH*SCPAGS
Trigger: GGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGA...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCAGCACAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAAGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAQAWGDSSCLVCPGQCQARAES*AQRVAR
Trigger: TCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGC...TTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: MSPRMRYTRLCQAVGSVLYRVPG*AAQAWG
Trigger: GCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTA...CAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCTCAAGGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PQGSLAPGHRQPNPLPYPAVQGS*LGSTGL
Trigger: CAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGC...TGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGTGCAGATTGGGCAGGTaGGGTTCCCCCACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQERRRSCFPGILGAQGLCRLGR*GSPTQR
Trigger: TCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCA...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTAGATGGGCTCAGCACTaGGCGTCTCCACACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPASLGPRDWFFHRMILPRWAQH*ASPHLH
Trigger: GTGGAGGTGTGGAGACGCTCAGTGCTGAGCCCATCT...AGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: VSPASLGPRDWFFHRMILARSWS*RVWCQT
Trigger: TGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGC...CAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDSSQVL*RWSGPA
Trigger: TGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGA...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCAGGTGGGGGAGGGAAGCTATTaGCAGGTGTGCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: WPWPQALGLWEAPIWHQVGEGSY*QVCFHG
Trigger: ACCATGAAAGCACACCTGTCAATAGCTTCCCTCCCC...CACCTGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATAAGAGGGTGAGCCTCTaGCGGAGCCCAGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDKRVSL*RSPENP
Trigger: CGGGTTCTCTGGGCTCCGGCAGAGGCTCACCCTCTT...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGAAGAGGGTGAGCCTCTaGCGGAGCCCAGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: YQVVPGGRQCVGQPIGFSKRVSL*RSPENP
Trigger: CGGGTTCTCTGGGCTCCGGCAGAGGCTCACCCTCTT...CGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCCTGGCACAACCTGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGAGCAGGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGGGAGCCGGGGCACTATaGGATGTAACCTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RAGLSARAESWAQRVARRGAGAL*DVTWQD
Trigger: ATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCC...CCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGAGCCCTGTAGAGAAGGCAGCACAGTGGGTCTaGACAGTCAGGGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GGRQCVGQPIGFSSPVEKAAQWV*TVRVRA
Trigger: GGCACGGACCCTGACTGTGCAGACCCACTGTGCTGC...CTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGGCACCTGGCCGGGATaGGGGCGGCAGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWGTWPG*GRQART
Trigger: GGTTCTGGCCTGCCGCCCGCATCCCGGCCAGGTGCC...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCGGCACCTGGCCGGGATaGGGGCGGCAGGCCAGAACC +
Preference number: 4 (lower is better)
Translates to: GFFTLSYIKNFPKCGPWGGTWPG*GRQART
Trigger: GGTTCTGGCCTGCCGCCCGCATCCCGGCCAGGTGCC...GCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LQERRRSCFPGILGAQGLADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGAGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QLQERRRSCFPGILGAQGADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...TCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAACTTAGGGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QAWGDSSCLVCPGQCQLRACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...CCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCCTTCCTACACGGGGCTaGTTCGTCTGTCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFLPTRG*FVCPVP
Trigger: GGGGACGGGACAGACGAACCAGCCCCGTGTAGGAAG...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: LQERRRSCFPGILGAQGLHSRVH*HWPQEL
Trigger: AAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTG...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACAGGGCTCCCAAGCCTTaGCCATCGCTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDRAPKP*PSLHRA
Trigger: GGCTCTATGAAGCGATGGCCAAGGCTTGGGAGCCCT...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGCCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACAGGCTCTGGGCCTCTaGGAGGCTCCCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSQALGL*EAPIWH
Trigger: ATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTG...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PASLGPRDWFFHRMILPGFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...ACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATTTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTGSQTPSHIQLNQLQERAVQGS*LGSTGL
Trigger: CAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGC...CCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GLEKLHVAPHAIYQVVPGADCTA*WPRSPR
Trigger: GCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGC...GCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: SGKVACRPACDIPGCARRADCTA*WPRSPR
Trigger: GCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGC...CCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTCGGGATCCGTGGAGTTaGTCAAGAGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AVSTGRELGTKSSQTAGRRDPWS*SRARSS
Trigger: AGAACTTCTGGCTCTTGATCAACTCCACGGATCCCG...ACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GCAAAACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCA +
Preference number: 4 (lower is better)
Translates to: AKQWPWPQALGLWEAPIWAHGRW*YLQQIA
Trigger: TGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGC...CCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AAGCTCCCCCACCAGCCACTGGAGCTGTCCTGCGGGATCCGTGGAGTTGATCAACAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLPHQPLELSCGIRGVDQQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...TTGATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PASLGPRDWFFHRMILPGQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...ACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EKVLFPRHPWGPGTGSFTADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...GGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGTACACACGGTAACCTaGAAGGATGTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: AVSTGRELGTKSSQTAGRVHTVT*KDVGLT
Trigger: TGTCAGCCCCACATCCTTGCAGGTTACCGTGTGTAC...ACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS-3UTR CCA 90 bp CCTCAAGGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCACCACGCGAGCCACATTaGGTTCCTTCTTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PQGSLAPGHRQPNPLPYPPREPH*VPSSAR
Trigger: TCGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGG...TGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EGPVSPASLGPRDWFFHRRWTMD*HTAGGA
Trigger: AGCACCACCTGCCGTGTGCCAATCCATTGTCCACCT...CCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAAAGAGGTGGACAATaGATTGGCACACGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SARAESWAQRVARRQGVPQRGGQ*IGTRQV
Trigger: CACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTG...TGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGCCAGTATCCGGCACCTaGCCGGGATGCGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWPVSGT*PGCGRQ
Trigger: CTGCCGCCCGCATCCCGGCCAGGTGCCGGATACTGG...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGATCAAAAGGGCCGGCTaGGCCCAGCCCACTCAACAG +
Preference number: 4 (lower is better)
Translates to: GTGSQTPSHIQLNQLQERIKRAG*AQPTQQ
Trigger: CTGTTGAGTGGGCTGGGCCCAGCCGGCCCTTTTGAT...CCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PASLGPRDWFFHRMILPGRVHWH*PQELPH
Trigger: GTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCT...ACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAAGCCAGCGGGAGGAGTaGTTGCCCTCAATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSSQREE*LPSMKG
Trigger: CCCCTTCATTGAGGGCAACCACTCCTCCCGCTGGCT...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGAGCCCTGTAGAGAAGAGCCAGCGGGAGGAGTaGTTGCCCTCAATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GGRQCVGQPIGFSSPVEKSQREE*LPSMKG
Trigger: CCCCTTCATTGAGGGCAACCACTCCTCCCGCTGGCT...CTTCTCTACAGGGCTCGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAGCGGAGACCGGGGTATaGGGAAAGAGCATAGAACCC +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGAETGV*GKSIEP
Trigger: GGGTTCTATGCTCTTTCCCCATACCCCGGTCTCCGC...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTATCCCCCACCAGCCACTaGAGCTGTCCTGCGGGATCC +
Preference number: 4 (lower is better)
Translates to: QIQDVGLMVQDHVRAPGVSPTSH*SCPAGS
Trigger: GGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGA...TACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSTGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: KPAPGKEKVLFPRHPWGPTGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...TGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDARAES*AQRVAR
Trigger: TCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGC...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTGCCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATCATAGAAGACCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VPGRLQPAAGSESLHHRRPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...TCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KPAPGKEKVLFPRHPWGPAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...TGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATTTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGAGGCAGTCTAGCTCCTaGGCACAGGCAGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: VSPASLGPRDWFFHRMILRQSSS*AQAAKP
Trigger: GGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCT...CAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCACCACGCGAGCCACATTaGGTTCCTTCAGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: KPAPGKEKVLFPRHPWGPPREPH*VPSARG
Trigger: ACCTCGGGCTGAAGGAACCCAATGTGGCTCGCGTGG...TGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS-3UTR TCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCTGGGGAGAAAGAGGGTaGGCCTCTGCCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFWGERG*ASAGAQ
Trigger: CTGGGCTCCGGCAGAGGCTCACCCTCTTTCTCCCCA...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTGGAAGAGGATGCGGCTaGCAGGGGCACCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QGLVLSPDDLAWLNHSSIGRGCG*QGHLGL
Trigger: CAGCCCCAGGTGCCCCTGTCAGCCGCATCCTCTTCC...AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTTCCATCGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACA +
Preference number: 4 (lower is better)
Translates to: DVGLMVQDHVRAPGVVSIARSWS*RVWCQT
Trigger: TGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGC...GATGGAAACTACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCCCAATTATATGCACCTaGGGGTGCGCAGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFPIICT*GCAGLR
Trigger: CCGAAGCCCTGCGCACCCTCAGGTGCATATAATTGG...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533123.5
CDS-3UTR GCA 90 bp TCAGACAGTGCCCTGGGGGAATGTGGCCAATTATATGCACTTTGTCTCCTCGATGTCCCGTCTTGTCCCTaGTCCCGGCCGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: SDSALGECGQLYALCLLDVPSCP*SRPDLG
Trigger: CCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGAC...ATCGAGGAGACAAAGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGGGAGCCGGGGCACTATaGGATGTAACCTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GTGSQTPSHIQLNQLQERGAGAL*DVTWQD
Trigger: ATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCC...CCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGGGAGCCGGGGCACTATaGGATGTAACCTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: VSPASLGPRDWFFHRMILGAGAL*DVTWQD
Trigger: ATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCC...CAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGGGAGCCGGGGCACTATaGGATGTAACCTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: YQVVPGGRQCVGQPIGFSGAGAL*DVTWQD
Trigger: ATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCC...CGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCCTGGCACAACCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCA +
Preference number: 4 (lower is better)
Translates to: LQERRRSCFPGILGAQGLAHGRW*YLQQIA
Trigger: TGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGC...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCGAACTTCCTCACAAGTaGTGTGACGGTGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVSPASLGPRDWFFHRMIELPHK*CDGGQG
Trigger: GCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTC...GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: MSPRMRYTRLCQAVGSVLQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...CAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGACGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PGHRQPNPLPYPAKPAPGRYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...TCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATCGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDRYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: MSPRMRYTRLCQAVGSVLACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...CAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGAAGGTCTGGAAAAGTTaGATGTCGCCCCGCATGCGA +
Preference number: 4 (lower is better)
Translates to: LQERRRSCFPGILGAQGLKVWKS*MSPRMR
Trigger: TCGCATGCGGGGCGACATGCAACTTTTCCAGACCTT...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGAAAGGTCTGGAAAAGTTaGATGTCGCCCCGCATGCGA +
Preference number: 4 (lower is better)
Translates to: QLQERRRSCFPGILGAQGKVWKS*MSPRMR
Trigger: TCGCATGCGGGGCGACATGCAACTTTTCCAGACCTT...TCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAACTTAGGAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: QAWGDSSCLVCPGQCQLRSSCLV*PGQCQL
Trigger: AAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCT...CCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCTTCCTACACGGGGCTaGTTCGTCTGTCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LPYPAKPAPGKEKVLFPRLPTRG*FVCPVP
Trigger: GGGGACGGGACAGACGAACCAGCCCCGTGTAGGAAG...CCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCAGCCCATAGGTTTCTCGCCACGCGAGCCACATTaGGTTCCTTCTTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: YQVVPGGRQCVGQPIGFSPREPH*VPSSAR
Trigger: TCGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGG...CGAGAAACCTATGGGCTGCCCAACACACTGCCTACCGCCTGGCACAACCTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: APGHRQPNPLPYPAKPAPRWTMD*HTAGGA
Trigger: AGCACCACCTGCCGTGTGCCAATCCATTGTCCACCT...TGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCCCAGTGCCCACAGGTaGAGCCCAGGAGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GFFTLSYIKNFPKCGPWGPSAHR*SPGAGH
Trigger: GTGGCCTGCTCCTGGGCTCCACCTGTGGGCACTGGG...GCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCAGTATCCGGCACCTaGCCGGGATGCGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFPVSGT*PGCGRQ
Trigger: CTGCCGCCCGCATCCCGGCCAGGTGCCGGATACTGG...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLRVHWH*PQELPH
Trigger: GTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCT...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDRVHWH*PQELPH
Trigger: GTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCT...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: GAQGLVLSPDDLAWLNHSHSRVH*HWPQEL
Trigger: AAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTG...GCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAGGGCTCCCAAGCCTTaGCCATCGCTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFRAPKP*PSLHRA
Trigger: GGCTCTATGAAGCGATGGCCAAGGCTTGGGAGCCCT...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: KPAPGKEKVLFPRHPWGPAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...TGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLARAES*AQRVAR
Trigger: TCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGC...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPYPAKPAPGKEKVLFPRPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...CCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GAGAAGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EKLPVRYGSRYVCLGQIQAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...CTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCCAAATGTGGGCCCTaGGGCCCTAGCAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: RRRSCFPGILGAQGLVLSPKCGP*GPSKTV
Trigger: CACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGG...TGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGCTTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LGLYSMAVKGQQPQGSLASSQVL*RWSGPA
Trigger: TGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGA...AGCTAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCCGGGATCCGTGGAGTTaGTCAAGAGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: FPGILGAQGLVLSPDDLARDPWS*SRARSS
Trigger: AGAACTTCTGGCTCTTGATCAACTCCACGGATCCCG...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCGCAGCACAGTGGGTCTaGACAGTCAGGGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFAAQWV*TVRVRA
Trigger: GGCACGGACCCTGACTGTGCAGACCCACTGTGCTGC...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTGCAGCACAGTGGGTCTaGACAGTCAGGGTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: VNLGLYSMAVKGQQPQGSAAQWV*TVRVRA
Trigger: GGCACGGACCCTGACTGTGCAGACCCACTGTGCTGC...ACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSPASLGPRDWFFHRMILVPDIM*GDVSCP
Trigger: TGGACAGGAGACATCCCCGCACATGATGTCTGGCAC...CAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: EKLHVAPHAIYQVVPGGRGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...CCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGSSCLV*PGQCQL
Trigger: AAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCT...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATTGTAACCTGGCAGGATaGCCTTGGGGAGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDCNLAG*PWGERG
Trigger: CCCTCTTTCTCCCCAAGGCCATCCTGCCAGGTTACA...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACTATGCGATGTAACCTaGCAGGATGGCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSLAPGHRQPNPLPYPAKLCDVT*QDGLGE
Trigger: CTCCCCAAGGCCATCCTGCCAGGTTACATCGCATAG...TTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCACAAAGAGGTGGACAATaGATTGGCACACGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: APGHRQPNPLPYPAKPAPQRGGQ*IGTRQV
Trigger: CACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTG...TGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCCAAAGAGGTGGACAATaGATTGGCACACGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EKVLFPRHPWGPGTGSFTQRGGQ*IGTRQV
Trigger: CACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTG...GGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCATCATCCTCAAAGAGGTaGACAATGGATTGGCACACG +
Preference number: 4 (lower is better)
Translates to: TVALATGSGPLGGSHLASSSSKR*TMDWHT
Trigger: CGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGA...TGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGTCCCCCACCAGCCACTaGAGCTGTCCTGCGGGATCC +
Preference number: 4 (lower is better)
Translates to: GLFHPFLHQELSQMWALGSPTSH*SCPAGS
Trigger: GGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGA...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 4 (lower is better)
Translates to: QLQERRRSCFPGILGAQGLQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...TCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GAGAAGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: EKLPVRYGSRYVCLGQIQAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...CTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PAKPAPGKEKVLFPRHPWARAES*AQRVAR
Trigger: TCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGC...CCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGATGGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SCQCGMAPGMFAWVRFRMARAES*AQRVAR
Trigger: TCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGC...CATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAACCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GSVNLGLYSMAVKGQQPQPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...TTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLFHPFLHQELSQMWALGYRVPG*AAQAWG
Trigger: GCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTA...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGLVLSPDDLAWLNHSSIYRVPG*AAQAWG
Trigger: GCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTA...AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR CAA 72 bp AAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGTGTGTTGGGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KSCMSPRMRYTR*CQAVGSVLGSP
Trigger: TGGGCTGCCCAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTATGCAGATTGGGCAGGTaGGGTTCCCCCACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QIQDVGLMVQDHVRAPGVCRLGR*GSPTQR
Trigger: TCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCA...TACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTTCCATCTGCAGATTGGGCAGGTaGGGTTCCCCCACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: DVGLMVQDHVRAPGVVSICRLGR*GSPTQR
Trigger: TCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCA...GATGGAAACTACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTGGAAGAGGATGCGGCTaGCAGGGGCACCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DDLAWLNHSSIWAFSPFPGRGCG*QGHLGL
Trigger: CAGCCCCAGGTGCCCCTGTCAGCCGCATCCTCTTCC...AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: PGHRQPNPLPYPAKPAPGMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...TCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: FPGILGAQGLVLSPDDLAMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAATCTACTCCATGGCTGTaGAAGGACAGCAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GSLAPGHRQPNPLPYPAKSTPWL*KDSSLK
Trigger: CTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGA...TTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCA +
Preference number: 4 (lower is better)
Translates to: VSPASLGPRDWFFHRMILAHGRW*YLQQIA
Trigger: TGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGC...CAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PAKPAPGKEKVLFPRHPWVPDIM*GDVSCP
Trigger: TGGACAGGAGACATCCCCGCACATGATGTCTGGCAC...CCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAAAAGGTCTGGAAAAGTTaGATGTCGCCCCGCATGCGA +
Preference number: 4 (lower is better)
Translates to: GSLAPGHRQPNPLPYPAKKVWKS*MSPRMR
Trigger: TCGCATGCGGGGCGACATGCAACTTTTCCAGACCTT...TTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCTTCCTACACGGGGCTaGTTCGTCTGTCCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GFFTLSYIKNFPKCGPWGLPTRG*FVCPVP
Trigger: GGGGACGGGACAGACGAACCAGCCCCGTGTAGGAAG...GCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGATGCTATGCGATGTAACCTaGCAGGATGGCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SCQCGMAPGMFAWVRFRMLCDVT*QDGLGE
Trigger: CTCCCCAAGGCCATCCTGCCAGGTTACATCGCATAG...CATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGTCATCCTCAAAGAGGTaGACAATGGATTGGCACACG +
Preference number: 4 (lower is better)
Translates to: LQERRRSCFPGILGAQGLSSSKR*TMDWHT
Trigger: CGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGA...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCCCAGTATCCGGCACCTaGCCGGGATGCGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPPVSGT*PGCGRQ
Trigger: CTGCCGCCCGCATCCCGGCCAGGTGCCGGATACTGG...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATCCACATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCATACCTGGCATCAAAAGGGCCGGCTaGGCCCAGCCCACTCAACAG +
Preference number: 4 (lower is better)
Translates to: IHMSVAKELSSQGVLIPGIKRAG*AQPTQQ
Trigger: CTGTTGAGTGGGCTGGGCCCAGCCGGCCCTTTTGAT...GCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATACAGGTGTGCTTTCATaGTTACCCACAGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDTGVLS*LPTAGY
Trigger: GTACCCTGCTGTGGGTAACCATGAAAGCACACCTGT...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCACAGGTGTGCTTTCATaGTTACCCACAGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: EKVLFPRHPWGPGTGSFTTGVLS*LPTAGY
Trigger: GTACCCTGCTGTGGGTAACCATGAAAGCACACCTGT...GGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGGGCTCCCAAGCCTTaGCCATCGCTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: SDSGCRSHGPGPRESSRSRAPKP*PSLHRA
Trigger: GGCTCTATGAAGCGATGGCCAAGGCTTGGGAGCCCT...ACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTTCCATCGCGGAGACCGGGGTATaGGGAAAGAGCATAGAACCC +
Preference number: 4 (lower is better)
Translates to: DVGLMVQDHVRAPGVVSIAETGV*GKSIEP
Trigger: GGGTTCTATGCTCTTTCCCCATACCCCGGTCTCCGC...GATGGAAACTACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCGGCCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTCCCCCACCAGCCACTaGAGCTGTCCTGCGGGATCC +
Preference number: 4 (lower is better)
Translates to: AAGSESLHHRRPQIHPHESPTSH*SCPAGS
Trigger: GGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGA...CTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 4 (lower is better)
Translates to: FPGILGAQGLVLSPDDLALQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 4 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHLQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SDSGCRSHGPGPRESSRSAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...ACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VNLGLYSMAVKGQQPQGSTGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...ACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PAPGKEKVLFPRHPWGPGNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...CCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGACCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCACCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: APGHRQPNPLPYPAKPAPPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...TGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTAGGCAGTCTAGCTCCTaGGCACAGGCAGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: VNLGLYSMAVKGQQPQGSRQSSS*AQAAKP
Trigger: GGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCT...ACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTGCCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATCATAGAAGATCTACTCCATGGCTGTaGAAGGACAGCAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: VPGRLQPAAGSESLHHRRSTPWL*KDSSLK
Trigger: CTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGA...TCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAGTCCCGTCTTGTCCCTaGTCCCGGCCGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTAAFGLFHPFLHQELSQVPSCP*SRPDLG
Trigger: CCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGAC...TTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCACTGGAGCTGTCCTaGGGGATCCGTGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFPLELS*GIRGVD
Trigger: ATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGG...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342245.9
ENST00000534405.5
CDS-3UTR CCA 90 bp CCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTCATCCTCAAAGAGGTaGACAATGGATTGGCACACG +
Preference number: 4 (lower is better)
Translates to: PASLGPRDWFFHRMILPGSSSKR*TMDWHT
Trigger: CGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGA...ACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGACAGGTGTGCTTTCATaGTTACCCACAGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GTGSQTPSHIQLNQLQERTGVLS*LPTAGY
Trigger: GTACCCTGCTGTGGGTAACCATGAAAGCACACCTGT...CCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCAGCCAGCGGGAGGAGTaGTTGCCCTCAATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGASQREE*LPSMKG
Trigger: CCCCTTCATTGAGGGCAACCACTCCTCCCGCTGGCT...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAAGCCAGCGGGAGGAGTaGTTGCCCTCAATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: NLGLYSMAVKGQQPQGSLSQREE*LPSMKG
Trigger: CCCCTTCATTGAGGGCAACCACTCCTCCCGCTGGCT...TAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 4 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFLQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PVSPASLGPRDWFFHRMIRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: QGLVLSPDDLAWLNHSSITGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCCAAATGTGGGCCCTaGGGCCCTAGCAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: PYPAKPAPGKEKVLFPRHPKCGP*GPSKTV
Trigger: CACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGG...ATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSSRKGEGPVSPASLGPRNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...CCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGCCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 4 (lower is better)
Translates to: RSGKVACRPACDIPGCARLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...CCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 4 (lower is better)
Translates to: SDSGCRSHGPGPRESSRSLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...ACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTTGCCCTGGGGGAATGTaGCCAATTATATGCACCTTT +
Preference number: 4 (lower is better)
Translates to: SPASLGPRDWFFHRMILPCPGGM*PIICTF
Trigger: AAAGGTGCATATAATTGGCCACATTCCCCCAGGGCA...AGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526280.1
CDS-3UTR TCA 90 bp TCTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCAGCTCTGGCGGAGTaGCGCTCCGTAGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SHTWLQFGNNSSSSSSDSAALAE*RSVAGH
Trigger: ATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGC...ACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GCCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTTGGGGAGAAAGAGGGTaGGCCTCTGCCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGSESLHHRRPQIHPHECWGERG*ASAGAQ
Trigger: CTGGGCTCCGGCAGAGGCTCACCCTCTTTCTCCCCA...ACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: GLEKLHVAPHAIYQVVPGGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...GCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTCGGACGATAAGTACCTaGGGGTGCGCAGGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFRTIST*GCAGLR
Trigger: CCGAAGCCCTGCGCACCCTCAGGTACTTATCGTCCG...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526280.1
ENST00000534405.5
CDS-3UTR GCA 90 bp GATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTAAGAGGGTGAGCCTCTaGCGGAGCCCAGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: DDLAWLNHSSIWAFSPFPKRVSL*RSPENP
Trigger: CGGGTTCTCTGGGCTCCGGCAGAGGCTCACCCTCTT...AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGGGAGCCGGGGCACTATaGGATGTAACCTGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLFHPFLHQELSQMWALGGAGAL*DVTWQD
Trigger: ATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCC...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTGAACTTCCTCACAAGTaGTGTGACGGTGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VNLGLYSMAVKGQQPQGSELPHK*CDGGQG
Trigger: GCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTC...ACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGCCACTGGAGCTGTCCTaGGGGATCCGTGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWPLELS*GIRGVD
Trigger: ATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGG...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAACTTAGGATGTGGCCAATTATATaGACTTTGTCTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: QAWGDSSCLVCPGQCQLRMWPII*TLSPRS
Trigger: GGATCGAGGAGACAAAGTGCATATAATTGGCCACAT...CCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342245.9
ENST00000534405.5
CDS-3UTR GCA 90 bp TCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGCAGTGTGTTGGGCATGTGGCCAATTATATaGACTTTGTCTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: SPRMRYTRLCQAVGSVLGMWPII*TLSPRS
Trigger: GGATCGAGGAGACAAAGTGCATATAATTGGCCACAT...GCCCAACACACTGCCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLFHPFLHQELSQMWALGQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLFHPFLHQELSQMWALGADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCAGACGGCAGGGCGTaGCACAGGGCTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFPDGRA*HRAPRV
Trigger: CACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGG...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGCCAGACGGCAGGGCGTaGCACAGGGCTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMPDGRA*HRAPRV
Trigger: CACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGG...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATCCACATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCATACCTGGCAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IHMSVAKELSSQGVLIPGRWTMD*HTAGGA
Trigger: AGCACCACCTGCCGTGTGCCAATCCATTGTCCACCT...GCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATTCATCCTCAAAGAGGTaGACAATGGATTGGCACACG +
Preference number: 4 (lower is better)
Translates to: SCFPGILGAQGLVLSPDDSSSKR*TMDWHT
Trigger: CGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGA...ATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 4 (lower is better)
Translates to: VWKSCMSPRMRYTRLCQALQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...CGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: PAPGKEKVLFPRHPWGPGGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...CCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTCAGGCTCTGGGCCTCTaGGAGGCTCCCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFQALGL*EAPIWH
Trigger: ATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTG...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 4 (lower is better)
Translates to: IQDVGLMVQDHVRAPGVVLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...AACTACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGAGTCCAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCTACAGGGTTCCTGGCTaGGCAGCACAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVQVSYLYFNRLAASGRSYRVPG*AAQAWG
Trigger: GCCCCAGGCCTGTGCTGCCCAGCCAGGAACCCTGTA...GCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
3UTR CAA 72 bp GACCACGTGAGAGCTCCCGGAGTAGTTTCCATCTATTaGGTACACACGGTAACCTGCAAGGATGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DHVRAPGVVSIY*VHTVTCKDVGL
Trigger: CAGCCCCACATCCTTGCAGGTTACCGTGTGTACCAAATAGATGGAAACTACTCCGGGAGCTCTCACGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS-3UTR TCA 90 bp CAGCTCTTCAGACAGTGCCCTGGGGGAATGTGGCCAATTATATGCACTTTGTCTTGCAGATTGGGCAGGTaGGGTTCCCCCACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: QLFRQCPGGMWPIICTLSCRLGR*GSPTQR
Trigger: TCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCA...AGACAAAGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CCAGGGTGTTCTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTAGATGGGCTCAGCACTaGGCGTCTCCACACCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGCSHTWLQFGNNSSSSSRWAQH*ASPHLH
Trigger: GTGGAGGTGTGGAGACGCTCAGTGCTGAGCCCATCT...AGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAGAACACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGATGAGAGATGTTCCAAGATaGGAAAATGTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SCQCGMAPGMFAWVRFRMRDVPR*ENVPVP
Trigger: GGGCACTGGGACATTTTCTCATCTTGGAACATCTCT...CATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTATGTGGCCAATTATATaGACTTTGTCTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: PASLGPRDWFFHRMILPGMWPII*TLSPRS
Trigger: GGATCGAGGAGACAAAGTGCATATAATTGGCCACAT...ACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: WAFSPFPTSRTFPNVGPGGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...CCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTGCCGATGTAGGTAGTTaGACTGGGTGCCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFADVGS*TGCQEG
Trigger: GCCTTCCTGGCACCCAGTGCAACTACCTACATCGGC...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: IQDVGLMVQDHVRAPGVVGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...AACTACTCCGGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFSSCLV*PGQCQL
Trigger: AAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCT...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCCAGTGCCCACAGGTaGAGCCCAGGAGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LNHSSIWAFSPFPTSRTFPSAHR*SPGAGH
Trigger: GTGGCCTGCTCCTGGGCTCCACCTGTGGGCACTGGG...GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGACAGGTGTGCTTTCATaGTTACCCACAGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LPYPAKPAPGKEKVLFPRTGVLS*LPTAGY
Trigger: GTACCCTGCTGTGGGTAACCATGAAAGCACACCTGT...CCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGCTGCCAGTGCGGTATGGCTCCCGGTATGTTTGCCTGGGTCAGATTCAGGATGTGCCCTGGGGGAATGTaGCCAATTATATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: SCQCGMAPGMFAWVRFRMCPGGM*PIICTL
Trigger: CAAAGTGCATATAATTGGCCACATTCCCCCAGGGCA...CATCCTGAATCTGACCCAGGCAAACATACCGGGAGCCATACCGCACTGGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PAKPAPGKEKVLFPRHPWRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...CCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCCCATCTGGCATCAGGTaGCGGCACAGAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPPSGIR*RHRAGL
Trigger: CAGCCCTGCTCTGTGCCGCCACCTGATGCCAGATGG...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGCAAAACAGTGGCCTTaGCCACAGGCTCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGFFTLSYIKNFPKCGPWAKQWP*PQALGL
Trigger: GAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGC...CCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGTTTCCATCTATTTGGTACACACGGTAACCTGCAAGGATGTGGGGCTGACAGGCCCAAATGTGGGCCCTaGGGCCCTAGCAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: SFHLFGTHGNLQGCGADRPKCGP*GPSKTV
Trigger: CACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGG...CCTGTCAGCCCCACATCCTTGCAGGTTACCGTGTGTACCAAATAGATGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS-3UTR CCA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 4 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCTGGGGAGAAAGAGGGTaGGCCTCTGCCGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LNHSSIWAFSPFPTSRTFWGERG*ASAGAQ
Trigger: CTGGGCTCCGGCAGAGGCTCACCCTCTTTCTCCCCA...GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTTGCAGATTGGGCAGGTaGGGTTCCCCCACCCAAAGA +
Preference number: 4 (lower is better)
Translates to: DDLAWLNHSSIWAFSPFPCRLGR*GSPTQR
Trigger: TCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCA...AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTGGGGAGGGAAGCTATTaGCAGGTGTGCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: QGLVLSPDDLAWLNHSSIGEGSY*QVCFHG
Trigger: ACCATGAAAGCACACCTGTCAATAGCTTCCCTCCCC...AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGGGGAGGGAAGCTATTaGCAGGTGTGCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWGEGSY*QVCFHG
Trigger: ACCATGAAAGCACACCTGTCAATAGCTTCCCTCCCC...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGTCCAGGACCACGTGAGAGCTCCCGGAGTAGTTTCCATCTATTTGGTACACACATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: GPGPRESSRSSFHLFGTHMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...GTGTGTACCAAATAGATGGAAACTACTCCGGGAGCTCTCACGTGGTCCTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGTCTACTCCATGGCTGTaGAAGGACAGCAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWSTPWL*KDSSLK
Trigger: CTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGA...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp AACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTTCTACTCCATGGCTGTaGAAGGACAGCAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: NPLPYPAKPAPGKEKVLFSTPWL*KDSSLK
Trigger: CTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGA...AAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCA +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWAHGRW*YLQQIA
Trigger: TGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGC...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTGAACTTCCTCACAAGTaGTGTGACGGTGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFELPHK*CDGGQG
Trigger: GCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTC...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGCCACTGGAGCTGTCCTaGGGGATCCGTGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LGFFTLSYIKNFPKCGPWPLELS*GIRGVD
Trigger: ATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGG...CCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: DDLAWLNHSSIWAFSPFPGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: NLGLYSMAVKGQQPQGSLGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...TAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp AGTTTCCATCTATTTGGTACACACGGTAACCTGCAAGGATGTGGGGCTGACAGGCGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SFHLFGTHGNLQGCGADRRYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...CCTGTCAGCCCCACATCCTTGCAGGTTACCGTGTGTACCAAATAGATGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS-3UTR GCA 90 bp CTCAAATTCATCCACATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCCGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKFIHMSVAKELSSQGVLRYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...GAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCATGTGGCCAATTATATaGACCTTTCTTTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKVLFPRHPWGPGTGSFTMWPII*TFLFPS
Trigger: GGAAGGGAAAAGAAAGGTGCATATAATTGGCCACAT...GGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526280.1
CDS-3UTR CCA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFRWTMD*HTAGGA
Trigger: AGCACCACCTGCCGTGTGCCAATCCATTGTCCACCT...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WAFSPFPTSRTFPNVGPGRWTMD*HTAGGA
Trigger: AGCACCACCTGCCGTGTGCCAATCCATTGTCCACCT...CCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGGACCACGTGAGAGCTCCCGGAGTAGTTTCCATCTATTTGGTACACACGGTACAAAGAGGTGGACAATaGATTGGCACACGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QDHVRAPGVVSIYLVHTVQRGGQ*IGTRQV
Trigger: CACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTG...TACCGTGTGTACCAAATAGATGGAAACTACTCCGGGAGCTCTCACGTGGTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCATCAAAAGGGCCGGCTaGGCCCAGCCCACTCAACAG +
Preference number: 4 (lower is better)
Translates to: AFGLFHPFLHQELSQMWAIKRAG*AQPTQQ
Trigger: CTGTTGAGTGGGCTGGGCCCAGCCGGCCCTTTTGAT...GGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: IPGYNSVIIPAPALQTVPHSRVH*HWPQEL
Trigger: AAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTG...GGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGCAGTCTAGCTACAGGTGTGCTTTCATaGTTACCCACAGCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: LGLYSMAVKGQQPQGSLATGVLS*LPTAGY
Trigger: GTACCCTGCTGTGGGTAACCATGAAAGCACACCTGT...AGCTAGACTGCCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGCGGAGACCGGGGTATaGGGAAAGAGCATAGAACCC +
Preference number: 4 (lower is better)
Translates to: LGFFTLSYIKNFPKCGPWAETGV*GKSIEP
Trigger: GGGTTCTATGCTCTTTCCCCATACCCCGGTCTCCGC...CCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: FPGILGAQGLVLSPDDLAGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...GGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PNPLPYPAKPAPGKEKVLRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...CAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCGCACGGGCAGAGAGCTaGGCACAAAGAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: IPGYNSVIIPAPALQTVPARAES*AQRVAR
Trigger: TCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGC...GGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTCCCAAATGTGGGCCCTaGGGCCCTAGCAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFPKCGP*GPSKTV
Trigger: CACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGG...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTGCAGTACAGGGTTCCTaGCTGGGCAGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QVSYLYFNRLAASGRSSSAVQGS*LGSTGL
Trigger: CAGGCCTGTGCTGCCCAGCCAGGAACCCTGTACTGC...ACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFADCTA*WPRSPR
Trigger: GCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKVPDIM*GDVSCP
Trigger: TGGACAGGAGACATCCCCGCACATGATGTCTGGCAC...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFVPDIM*GDVSCP
Trigger: TGGACAGGAGACATCCCCGCACATGATGTCTGGCAC...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCCAGCTCTTCAGACAGTaGCCTGGGGGAATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPQLFRQ*PGGMWP
Trigger: TGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTG...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: WAFSPFPTSRTFPNVGPGGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...CCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CCAGGGTGTTCTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTCGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PGCSHTWLQFGNNSSSSSRYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...AGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAGAACACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCGCATGTCGCCCCGCATaGGATATACCAGGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSESLHHRRPQIHPHECGACRPA*DIPGCA
Trigger: GGCACAACCTGGTATATCGCATGCGGGGCGACATGC...GCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCCACGCGAGCCACATTaGGTTCCTTCTTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: AFGLFHPFLHQELSQMWAPREPH*VPSSAR
Trigger: TCGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGG...GGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCACGCGAGCCACATTaGGTTCCTTCTTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LIPGYNSVIIPAPALQTVPREPH*VPSSAR
Trigger: TCGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGG...CACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCAAAGAGGTGGACAATaGATTGGCACACGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFQRGGQ*IGTRQV
Trigger: CACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTG...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AGCCAGCGGCCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTAT +
Preference number: 4 (lower is better)
Translates to: SQRPAQSLFIIEDLKFIHLQTVP*GNVANY
Trigger: ATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAG...GTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCAGGCTCTGGGCCTCTaGGAGGCTCCCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFQALGL*EAPIWH
Trigger: ATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTG...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTCAGGCTCTGGGCCTCTaGGAGGCTCCCATCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QQHLGFFTLSYIKNFPKCQALGL*EAPIWH
Trigger: ATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTG...ACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGGGCAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGSVNLGLYSMAVKGQQPNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...AGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTGCCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATCATAGAAGATTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPGRLQPAAGSESLHHRRFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...TCTTCTATGATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
3UTR CAA 72 bp GCCCTTATGGTAGAGAAACCAGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCGATATACCAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ALMVEKPEGLEK*HVAPHAIYQVV
Trigger: CACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCTCTACCATAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTGGGGAGGGAAGCTATTaGCAGGTGTGCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFGEGSY*QVCFHG
Trigger: ACCATGAAAGCACACCTGTCAATAGCTTCCCTCCCC...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTCGGGATCCGTGGAGTTaGTCAAGAGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFRDPWS*SRARSS
Trigger: AGAACTTCTGGCTCTTGATCAACTCCACGGATCCCG...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR TCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCGTGTGGCCAAAGAACTaGGCAGCCAGGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPVWPKN*AARVFS
Trigger: TGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACAC...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTATGCGATGTAACCTaGCAGGATGGCCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AFGLFHPFLHQELSQMWALCDVT*QDGLGE
Trigger: CTCCCCAAGGCCATCCTGCCAGGTTACATCGCATAG...GGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTATCAAAAGGGCCGGCTaGGCCCAGCCCACTCAACAG +
Preference number: 4 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFIKRAG*AQPTQQ
Trigger: CTGTTGAGTGGGCTGGGCCCAGCCGGCCCTTTTGAT...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGAGCCAGCGGGAGGAGTaGTTGCCCTCAATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMSQREE*LPSMKG
Trigger: CCCCTTCATTGAGGGCAACCACTCCTCCCGCTGGCT...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAAGGGCTCCCAAGCCTTaGCCATCGCTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: TTAAFGLFHPFLHQELSQRAPKP*PSLHRA
Trigger: GGCTCTATGAAGCGATGGCCAAGGCTTGGGAGCCCT...TTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCTGGAGTCCAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGGGCTCCCAAGCCTTaGCCATCGCTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGVQVSYLYFNRLAASGRRAPKP*PSLHRA
Trigger: GGCTCTATGAAGCGATGGCCAAGGCTTGGGAGCCCT...GCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTGGACTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526280.1
ENST00000533123.5
CDS-3UTR CCA 90 bp TCCAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGCGGAGACCGGGGTATaGGGAAAGAGCATAGAACCC +
Preference number: 4 (lower is better)
Translates to: SKSLIFILTDWQHQVAAAAETGV*GKSIEP
Trigger: GGGTTCTATGCTCTTTCCCCATACCCCGGTCTCCGC...TGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342245.9
ENST00000534405.5
CDS-3UTR CCA 90 bp GTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: VWKSCMSPRMRYTRLCQAGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...CGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGARNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGAGAAACCAGAAGGTCTaGAAAAGTTGCATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWRNQKV*KSCMSP
Trigger: GGGCGACATGCAACTTTTCCAGACCTTCTGGTTTCT...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCACAGGGCTCCGAGGGTaGGTGGCCCTTATGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LNHSSIWAFSPFPTSRTFTGLRG*VALMVE
Trigger: CTCTACCATAAGGGCCACCCACCCTCGGAGCCCTGT...GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGGAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: QCQLRPLLHGCERTAASRNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...CCTTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCATACCTGGCTACAATCCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: MSVAKELSSQGVLIPGYNPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...ATTGTAGCCAGGTATGAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAATTTCCCCGGCATCCTTaGGGCCCAGGGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SESLHHRRPQIHPHECGQFPRHP*GPGTGS
Trigger: AGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAA...TTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTAGGCAGTCTAGCTCCTaGGCACAGGCAGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: QQHLGFFTLSYIKNFPKCRQSSS*AQAAKP
Trigger: GGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCT...ACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
3UTR CAA 72 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGGGCTTTTTCACCCTTT +
Preference number: 4 (lower is better)
Translates to: QGLVLSPDDLAW*NHSSIWAFSPF
Trigger: AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
3UTR CAA 72 bp GACCACGTGAGAGCTCCCGGAGTAGTTTCCATCTATTaGGTACACACGGTAACCAGGATTAAGGCCGATGTA +
Preference number: 4 (lower is better)
Translates to: DHVRAPGVVSIY*VHTVTRIKADV
Trigger: TACATCGGCCTTAATCCTGGTTACCGTGTGTACCAAATAGATGGAAACTACTCCGGGAGCTCTCACGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: LGFFTLSYIKNFPKCGPWMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...CCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTGAACTTCCTCACAAGTaGTGTGACGGTGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTELPHK*CDGGQG
Trigger: GCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTC...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTCCACTGGAGCTGTCCTaGGGGATCCGTGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QQHLGFFTLSYIKNFPKCPLELS*GIRGVD
Trigger: ATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGG...ACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR GCA 90 bp CAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QQHLGFFTLSYIKNFPKCGSCTG*QEGYSQ
Trigger: CTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACC...ACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGCTCCCGGTATGTTTaGCTGGGTCAGATTCAGGAT +
Preference number: 4 (lower is better)
Translates to: IEDLKFIHMSVAKELSSQGSRYV*LGQIQD
Trigger: ATCCTGAATCTGACCCAGGCAAACATACCGGGAGCC...CTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GGTGTTCTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGAAGGTCTGGAAAAGTTaGATGTCGCCCCGCATGCGA +
Preference number: 4 (lower is better)
Translates to: GVLIPGYNSVIIPAPALQKVWKS*MSPRMR
Trigger: TCGCATGCGGGGCGACATGCAACTTTTCCAGACCTT...CTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAAAGAACTGAGCAGCCAGAGCTCCTGTCTTGTCTaGCCAGGGCAGTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: IEDLKFIHMSVAKELSSQSSCLV*PGQCQL
Trigger: AAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCT...CTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: LNHSSIWAFSPFPTSRTFHSRVH*HWPQEL
Trigger: AAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTG...GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: QQHLGFFTLSYIKNFPKCHSRVH*HWPQEL
Trigger: AAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTG...ACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGTGCCCTGGGGGAATGTaGCCAATTATATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: WAFSPFPTSRTFPNVGPGCPGGM*PIICTL
Trigger: CAAAGTGCATATAATTGGCCACATTCCCCCAGGGCA...CCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGCTGCCAGTGCGGTATaGCTCCCGGTATGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QQHLGFFTLSYIKNFPKCAASAV*LPVCLP
Trigger: AGGCAAACATACCGGGAGCCATACCGCACTGGCAGC...ACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGCCCAAATGTGGGCCCTaGGGCCCTAGCAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMPKCGP*GPSKTV
Trigger: CACTGTTTTGCTAGGGCCCCAGGGCCCACATTTGGG...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTTTGGGGCCCAGGGACTaGTTCTTTCACCGGATGATC +
Preference number: 4 (lower is better)
Translates to: QVSYLYFNRLAASGRSSSLGPRD*FFHRMI
Trigger: GATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAA...ACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TCTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTCGGGATCCGTGGAGTTaGTCAAGAGCCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SHTWLQFGNNSSSSSSDSRDPWS*SRARSS
Trigger: AGAACTTCTGGCTCTTGATCAACTCCACGGATCCCG...ACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GGAGTCCAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: GVQVSYLYFNRLAASGRSGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...GCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTGGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
CDS-3UTR TCA 90 bp CCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: PAQSLFIIEDLKFIHMSVGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...CACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAAAGAACTGAGCAGCGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCA +
Preference number: 4 (lower is better)
Translates to: IIEDLKFIHMSVAKELSSAHGRW*YLQQIA
Trigger: TGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGC...GCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGAACTTCCTCACAAGTaGTGTGACGGTGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFELPHK*CDGGQG
Trigger: GCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGCGATATACCAGGTTGTaGCAGGCGGTAGGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMRYTRL*QAVGSV
Trigger: CACACTGCCTACCGCCTGGCACAACCTGGTATATCG...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCCCGGATGATCTTGCCTaGTTGAACCACAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPPDDLA*LNHSSI
Trigger: AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp AACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTTTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: NPLPYPAKPAPGKEKVLFFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...AAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTTTTCTTTTCCCTTCCTaGGTTTCCACGGACGATAAG +
Preference number: 4 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFFLFPS*VSTDDK
Trigger: CTTATCGTCCGTGGAAACCCAGGAAGGGAAAAGAAA...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000526280.1
ENST00000534405.5
CDS-3UTR TCA 90 bp GCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCAGAGATGTTCCAAGATaGGAAAATGTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AFGLFHPFLHQELSQMWARDVPR*ENVPVP
Trigger: GGGCACTGGGACATTTTCTCATCTTGGAACATCTCT...GGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGGGGAGGGAAGCTATTaGCAGGTGTGCTTTCATGGT +
Preference number: 4 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFGEGSY*QVCFHG
Trigger: ACCATGAAAGCACACCTGTCAATAGCTTCCCTCCCC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp ACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGATCTTGCCTGGTTaGACCACAGCAGCATTTGGG +
Preference number: 4 (lower is better)
Translates to: TTAAFGLFHPFLHQELSQMILPG*TTAAFG
Trigger: CCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCAT...TTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp ACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAGGTTCTTTCACCGGATaGTCTTGCCTGGTTGAACCA +
Preference number: 4 (lower is better)
Translates to: TTAAFGLFHPFLHQELSQGSFTG*SCLVEP
Trigger: TGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACC...TTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTCATCCTCAAAGAGGTaGACAATGGATTGGCACACG +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPSSSKR*TMDWHT
Trigger: CGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGA...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR TCA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTAGAGATGTTCCAAGATaGGAAAATGTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTRDVPR*ENVPVP
Trigger: GGGCACTGGGACATTTTCTCATCTTGGAACATCTCT...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAATGCCCTGGGGGAATGTaGCCAATTATATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: TTAAFGLFHPFLHQELSQCPGGM*PIICTL
Trigger: CAAAGTGCATATAATTGGCCACATTCCCCCAGGGCA...TTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCAACCACAGCAGCATTTaGGCTTTTTCACCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSESLHHRRPQIHPHECGNHSSI*AFSPFP
Trigger: AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTT...GCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGTGTTCTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGTTTCTTTTCCCTTCCTaGGTTTCCACGGACGATAAG +
Preference number: 4 (lower is better)
Translates to: GVLIPGYNSVIIPAPALQFLFPS*VSTDDK
Trigger: CTTATCGTCCGTGGAAACCCAGGAAGGGAAAAGAAA...CTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534405.5
CDS-3UTR TCA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGAGAGATGTTCCAAGATaGGAAAATGTCCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMRDVPR*ENVPVP
Trigger: GGGCACTGGGACATTTTCTCATCTTGGAACATCTCT...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR GCA 90 bp ACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGCCAATTATATaGACTTTGTCTCCTCGATCC +
Preference number: 4 (lower is better)
Translates to: TTAAFGLFHPFLHQELSQMWPII*TLSPRS
Trigger: GGATCGAGGAGACAAAGTGCATATAATTGGCCACAT...TTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CCA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp GGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCGGGTGTTCTCATACCTaGCTACAATTCGGTAATAAT +
Preference number: 4 (lower is better)
Translates to: GSESLHHRRPQIHPHECGGCSHT*LQFGNN
Trigger: ATTATTACCGAATTGTAGCCAGGTATGAGAACACCC...GCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp TTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCTTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LNHSSIWAFSPFPTSRTFFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CCA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTTTATTTTAACAGACTaGCAGCATCAGGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMFILTD*QHQVAA
Trigger: TGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAA...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS GCA 90 bp CCCATCCAAAGGAGTCCGGGGGCTCCGGCGGTCCCGTCTTGTCCCTaGTCCCGGCCGGACCTGGGGCAGCTCTGGCGGAGTGACGCTCCG +
Preference number: 5 (lower is better)
Translates to: PIQRSPGAPAVPSCP*SRPDLGQLWRSDAP
Trigger: CGGAGCGTCACTCCGCCAGAGCTGCCCCAGGTCCGGCCGGGAGCAGGGACAAGACGGGACCGCCGGAGCCCCCGGACTCCTTTGGATGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000533196.1
ENST00000534405.5
CDS GCA 90 bp GGATGCGGGCGGCAGGCCAGAACCCCGGCGGCAGCACAGTGGGTCTaGACAGTCAGGGTCCGTGCCCTCCAGGTAGTCATGATCCCAGTG +
Preference number: 5 (lower is better)
Translates to: GCGRQARTPAAAQWV*TVRVRALQVVMIPV
Trigger: CACTGGGATCATGACTACCTGGAGGGCACGGACCCTGACTGTGCAGACCCACTGTGCTGCCGCCGGGGTTCTGGCCTGCCGCCCGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACTCCGGCGGTCCCGTCTaGTCCCTGCTCCCGGCCGGA +
Preference number: 5 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHSGGPV*SLLPAG
Trigger: TCCGGCCGGGAGCAGGGACAAGACGGGACCGCCGGA...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGAGGGTGGGGCGACAGCTCCTGTCTaGTCTGCCCAGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: WAQRVARRQGVPQGSEGGATAPV*SAQGSV
Trigger: GACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGC...CCCACCCTCGGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCACAGGGCTCCGCGACAGCTCCTGTCTaGTCTGCCCAGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: AESWAQRVARRQGVPQGSATAPV*SAQGSV
Trigger: GACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGC...GGAGCCCTGTGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGCTCCGTAGCGGGGCATaGTCGCGCTTCCTACACGGG +
Preference number: 5 (lower is better)
Translates to: EGPVSPASLGPRDWFFHRLRSGA*SRFLHG
Trigger: CCCGTGTAGGAAGCGCGACAATGCCCCGCTACGGAG...CCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCAGGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: QWPWPQALGLWEAPIWHQEVDNG*AHGRWC
Trigger: GCACCACCTGCCGTGTGCCAATCCATTGTCCACCTC...CTGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGAGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: QLQERRRSCFPGILGAQGVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...TCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: LQERRRSCFPGILGAQGLVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: SSRKGEGPVSPASLGPRDVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...GTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTCCCACGCGAGCCACATaGGGTTCCTTCAGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: APGKEKVLFPRHPWGPGTPTRAT*GSFSPR
Trigger: CCTCGGGCTGAAGGAACCCAATGTGGCTCGCGTGGG...AGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS TCA 90 bp CAGGGTACACTGGCACTGGCCCCAGGAACTTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCAGTTGGTCCTGACGAGTCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: QGTLALAPGTSSQVL*RWSGPAVGPDESGA
Trigger: GGCACCAGACTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGGCCTGGGGCGACAGCTCCTGTCTTGTCTGCCCAGGGCAGTGTCAACTTAGGCCCACGCGAGCCACATaGGGTTCCTTCTTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: QAWGDSSCLVCPGQCQLRPTRAT*GSFFSP
Trigger: CGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGGG...CCTAAGTTGACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGCCCCAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AGGGCTGTCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: RAVSTGRELGTKSSQTAGSRLHS*MATEPT
Trigger: CGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCT...CCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGACAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: EKVLFPRHPWGPGTGSFTGQGPQ*VLTSLV
Trigger: CACCAGACTCGTCAGGACCAACTGCGGGCCCTGACC...GGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS GCA 90 bp CACAGCAGGGTACACTGGCACTGGCCCCAGGAACTTCCTCACAAGTaGTGTGACGGTGGTCAGGGCCCGCAGTTGGTCCTGACGAGTCTG +
Preference number: 5 (lower is better)
Translates to: HSRVHWHWPQELPHK*CDGGQGPQLVLTSL
Trigger: CAGACTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp CCCACCCAAAGACATCTCGGAGCCGGGGCACTATGCGATGTAACCTaGCAGGATGGCCTTGGGGAGAAAGAGGGTGAGCCTCTGCCGGAG +
Preference number: 5 (lower is better)
Translates to: PTQRHLGAGALCDVT*QDGLGEKEGEPLPE
Trigger: CTCCGGCAGAGGCTCACCCTCTTTCTCCCCAAGGCCATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCCGAGATGTCTTTGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFGQGPQ*VLTSLV
Trigger: CACCAGACTCGTCAGGACCAACTGCGGGCCCTGACC...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAAAACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 5 (lower is better)
Translates to: QNSGLGHRLWASGRLPSGEGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...GCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGAAGCAAAACAGTGGCCTaGGCCACAGGCTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: QLQERRRSCFPGILGAQGSKTVA*ATGSGP
Trigger: AGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCT...TCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTGGGTCAGATTCAGGATGTAGGTCTCATGGTCCAGGACCACGTGAGAGCTCCCCTCCGTAGCGGGGCATaGTCGCGCTTCCTACACGGG +
Preference number: 5 (lower is better)
Translates to: LGQIQDVGLMVQDHVRAPLRSGA*SRFLHG
Trigger: CCCGTGTAGGAAGCGCGACAATGCCCCGCTACGGAG...GGGAGCTCTCACGTGGTCCTGGACCATGAGACCTACATCCTGAATCTGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCATGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: SARAESWAQRVARRQGVPWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...TGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PAPGKEKVLFPRHPWGPGMRYTR*CQAVGS
Trigger: ACTGCCTACCGCCTGGCACAACCTGGTATATCGCAT...CCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 5 (lower is better)
Translates to: LQERRRSCFPGILGAQGLEGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS TCA 90 bp TTCCTCACAAGTGCTGTGACGGTGGTCAGGGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACATCATGTGCGGGGATGTCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: FLTSAVTVVRARSWS*RVWCQTSCAGMSPV
Trigger: GACAGGAGACATCCCCGCACATGATGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS GCA 90 bp CAGGGCCCGCAGTTGGTCCTGACGAGTCTGGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCAGTACACCATATCAAAAGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: QGPQLVLTSLVPDIM*GDVSCPVHHIKRAG
Trigger: GCCGGCCCTTTTGATATGGTGTACTGGACAGGAGACATCCCCGCACATGATGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS GCA 90 bp CAAGGAGCAAGGGTAACTCCAGGGAGGGGCCACACATCCTGCCCATaGTTTGCAGGCTCTGGCTCCAACCTCCTTCCCCTATCCCACCAA +
Preference number: 5 (lower is better)
Translates to: QGARVTPGRGHTSCP*FAGSGSNLLPLSHQ
Trigger: TTGGTGGGATAGGGGAAGGAGGTTGGAGCCAGAGCCTGCAAAGCATGGGCAGGATGTGTGGCCCCTCCCTGGAGTTACCCTTGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531336.1
CDS-3UTR CAA 90 bp ACAGTGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCATTCTTCAGCCCGAGGTaGATGGCGGTGAATAGACCT +
Preference number: 5 (lower is better)
Translates to: TVALATGSGPLGGSHLASFFSPR*MAVNRP
Trigger: AGGTCTATTCACCGCCATCAACCTCGGGCTGAAGAA...TGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAAGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GSLAPGHRQPNPLPYPAKEVDNG*AHGRWC
Trigger: GCACCACCTGCCGTGTGCCAATCCATTGTCCACCTC...TTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLEVDNG*AHGRWC
Trigger: GCACCACCTGCCGTGTGCCAATCCATTGTCCACCTC...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFEVDNG*AHGRWC
Trigger: GCACCACCTGCCGTGTGCCAATCCATTGTCCACCTC...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGGGGGAGGGAAGCTATaGACAGGTGTGCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LQERRRSCFPGILGAQGLGGGKL*TGVLSW
Trigger: CCATGAAAGCACACCTGTCAATAGCTTCCCTCCCCC...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCAGCAAAACAGTGGCCTaGGCCACAGGCTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KEKVLFPRHPWGPGTGSFSKTVA*ATGSGP
Trigger: AGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCT...GAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGGCCTTGGCCACAGGCTCTGGGCCTCTGGGAGGCTCCCATCTGGCATCAGGTGGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: WPWPQALGLWEAPIWHQVEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...CACCTGATGCCAGATGGGAGCCTCCCAGAGGCCCAGAGCCTGTGGCCAAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGTCCTTCAGCCCGAGGTaGATGGCGGTGAATAGACCT +
Preference number: 5 (lower is better)
Translates to: LQERRRSCFPGILGAQGLSFSPR*MAVNRP
Trigger: AGGTCTATTCACCGCCATCAACCTCGGGCTGAAGGA...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS TCA 90 bp ATTGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGCGAGCCACATTGGGTTCCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: IGTRQVVLSSADCTA*WPRSPREPHWVPSA
Trigger: GGCTGAAGGAACCCAATGTGGCTCGCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS GCA 90 bp GCCTCACTCACCAGGATTAAGGCCGATGTAGGTAGTTGCACTGGGTaGCAGGAAGGCTACAGCCAGCGGCCGGCTCAGAGTCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: ASLTRIKADVGSCTG*QEGYSQRPAQSLFI
Trigger: GATGAAGAGACTCTGAGCCGGCCGCTGGCTGTAGCCTTCCTGGCACCCAGTGCAACTACCTACATCGGCCTTAATCCTGGTGAGTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531336.1
ENST00000532367.1
CDS CCA 90 bp GACAGGTGTGCTTTCATGGTTACCCACAGCAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCACAAGTGCTGTGACGGTGGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: DRCAFMVTHSRVHWH*PQELPHKCCDGGQG
Trigger: GCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTGGGTAACCATGAAAGCACACCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGCTATCTTCAGCAGATaGCACAGCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: LQERRRSCFPGILGAQGLAIFSR*HSLMAT
Trigger: CGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGC...CAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHMRYTR*CQAVGS
Trigger: ACTGCCTACCGCCTGGCACAACCTGGTATATCGCAT...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TCAGCACGGGCAGAGAGCTGGGCACAAAGAGTAGCCAGACGGCAGGGCGTGCCAGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: SARAESWAQRVARRQGVPDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...TGGCACGCCCTGCCGTCTGGCTACTCTTTGTGCCCAGCTCTCTGCCCGTGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGGGCAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTGCGACAGCTCCTGTCTaGTCTGCCCAGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: QGSVNLGLYSMAVKGQQPATAPV*SAQGSV
Trigger: GACACTGCCCTGGGCAGACAAGACAGGAGCTGTCGC...AGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCCTCCGTAGCGGGGCATaGTCGCGCTTCCTACACGGG +
Preference number: 5 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGALRSGA*SRFLHG
Trigger: CCCGTGTAGGAAGCGCGACAATGCCCCGCTACGGAG...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATTTCTTCAGCCCGAGGTaGATGGCGGTGAATAGACCT +
Preference number: 5 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDFFSPR*MAVNRP
Trigger: AGGTCTATTCACCGCCATCAACCTCGGGCTGAAGAA...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCTCAAGGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTATCTTCAGCAGATaGCACAGCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: PQGSLAPGHRQPNPLPYPAIFSR*HSLMAT
Trigger: CGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGC...TGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342245.9
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTGCTATCTTCAGCAGATaGCACAGCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: QERRRSCFPGILGAQGLVAIFSR*HSLMAT
Trigger: CGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGC...AACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: GLFHPFLHQELSQMWALGGQGPQ*VLTSLV
Trigger: CACCAGACTCGTCAGGACCAACTGCGGGCCCTGACC...CCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGGGGGGAGGGAAGCTATaGACAGGTGTGCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLGGGKL*TGVLSW
Trigger: CCATGAAAGCACACCTGTCAATAGCTTCCCTCCCCC...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GILGAQGLVLSPDDLAWLMRYTR*CQAVGS
Trigger: ACTGCCTACCGCCTGGCACAACCTGGTATATCGCAT...CAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCAAACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGAGCAAAACAGTGGCCTaGGCCACAGGCTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PNPLPYPAKPAPGKEKVLSKTVA*ATGSGP
Trigger: AGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCT...CAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: GLVLSPDDLAWLNHSSIWVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS TCA 90 bp ATTGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGCGAGCCACATTGGGTTCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: IGTRQVVLSSADCTA*WPRSPREPHWVPSS
Trigger: TGAAGAAGGAACCCAATGTGGCTCGCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCAAATTCATCCACATGAGTGTGGCCAAAGAACTGAGCAGCCAGGGTGTTCTCGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: LKFIHMSVAKELSSQGVLGQGPQ*VLTSLV
Trigger: CACCAGACTCGTCAGGACCAACTGCGGGCCCTGACC...GAGAACACCCTGGCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGGGGAGGGAAGCTATaGACAGGTGTGCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: PAKPAPGKEKVLFPRHPWGGGKL*TGVLSW
Trigger: CCATGAAAGCACACCTGTCAATAGCTTCCCTCCCCC...CCAAGGATGCCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCGGTAGGTGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: EKLHVAPHAIYQVVPGGRWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...CCTACCGCCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCCCCGGGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 5 (lower is better)
Translates to: LPYPAKPAPGKEKVLFPREGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...CCGGGGAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCAGCAAAACAGTGGCCTaGGCCACAGGCTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFSKTVA*ATGSGP
Trigger: AGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCT...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGAGAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GEGPVSPASLGPRDWFFHEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...GTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS GCA 90 bp GTCATCCTCAAAGAGGTGGACAATGGATTGGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCACAGCTTGATGGCCACGGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: VILKEVDNGLAHGRW*YLQQIAQLDGHGAH
Trigger: GTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp GCTATTGACAGGTGTGCTTTCATGGTTACCCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTTCCTCACAAGTGCTGTGACGGTGGT +
Preference number: 5 (lower is better)
Translates to: AIDRCAFMVTHSRVH*HWPQELPHKCCDGG
Trigger: ACCACCGTCACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTGGGTAACCATGAAAGCACACCTGTCAATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GAAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 5 (lower is better)
Translates to: EGPVSPASLGPRDWFFHRVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...CCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCAGTCTAGCTCCTGGGCACAGGCAGCCAAACCCCCTCCCATATCCAGCTAAAGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: GSLAPGHRQPNPLPYPAKDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...TTTAGCTGGATATGGGAGGGGGTTTGGCTGCCTGTGCCCAGGAGCTAGACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp CATGTCATCCTCAAAGAGGTGGACAATGGATTGGCACACGGCAGGTaGTGCTATCTTCAGCAGATTGCACAGCTTGATGGCCACGGAGCC +
Preference number: 5 (lower is better)
Translates to: HVILKEVDNGLAHGR*CYLQQIAQLDGHGA
Trigger: GGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp AGCACTGAGCGTCTCCACACCTCCACCATGTCATCCTCAAAGAGGTaGACAATGGATTGGCACACGGCAGGTGGTGCTATCTTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: STERLHTSTMSSSKR*TMDWHTAGGAIFSR
Trigger: TCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGGTGTGGAGACGCTCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGATCCAATTATATGCACTTaGTCTCCTCGATCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSCFPGILGAQGLVLSPDPIICT*SPRSSA
Trigger: TGCTGAGGATCGAGGAGACAAAGTGCATATAATTGG...ATCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AAGGTCCTGTTTCCCCGGCATCCTTGGGGCCCAGGGACTGGTTCTTTCACCGGAGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 5 (lower is better)
Translates to: KVLFPRHPWGPGTGSFTGVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...TCCGGTGAAAGAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAACAGGACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 5 (lower is better)
Translates to: QGLVLSPDDLAWLNHSSIEGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGTTTCCCCGGCATCCTaGGGGCCCAGGGACTGGTTC +
Preference number: 5 (lower is better)
Translates to: PAQSLFIIEDLKFIHMSVVSPAS*GPRDWF
Trigger: GAACCAGTCCCTGGGCCCCAAGGATGCCGGGGAAAC...CACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp CTCCACACCTCCACCATGTCATCCTCAAAGAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTTG +
Preference number: 5 (lower is better)
Translates to: LHTSTMSSSKRWTMD*HTAGGAIFSRLHSL
Trigger: CAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGGTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp AGCGTCTCCACACCTCCACCATGTCATCCTCAAAGAGGTGGACAATaGATTGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACA +
Preference number: 5 (lower is better)
Translates to: SVSTPPPCHPQRGGQ*IGTRQVVLSSADCT
Trigger: TGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGGTGTGGAGACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GTAGTTTCCATCTATTTGGTACACACGGTAACCAGGATTAAGGCCGATGTAGGTCTCCGTAGCGGGGCATaGTCGCGCTTCCTACACGGG +
Preference number: 5 (lower is better)
Translates to: VVSIYLVHTVTRIKADVGLRSGA*SRFLHG
Trigger: CCCGTGTAGGAAGCGCGACAATGCCCCGCTACGGAG...ACCTACATCGGCCTTAATCCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCCCACGCGAGCCACATaGGGTTCCTTCTTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: GSESLHHRRPQIHPHECGPTRAT*GSFFSP
Trigger: CGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGGG...GCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCCCCACGCGAGCCACATaGGGTTCCTTCTTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPPTRAT*GSFFSP
Trigger: CGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGGG...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: DDLAWLNHSSIWAFSPFPSRLHS*MATEPT
Trigger: CGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCT...AGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: VLSPDDLAWLNHSSIWAFSRLHS*MATEPT
Trigger: CGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCT...AAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTG +
Preference number: 5 (lower is better)
Translates to: QVSYLYFNRLAASGRSSSGQGPQ*VLTSLV
Trigger: CACCAGACTCGTCAGGACCAACTGCGGGCCCTGACC...ACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCGGGGGAGGGAAGCTATaGACAGGTGTGCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPGGGKL*TGVLSW
Trigger: CCATGAAAGCACACCTGTCAATAGCTTCCCTCCCCC...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGAAGSVE*IKSQKF
Trigger: GAACTTCTGGCTCTTGATCAACTCCACGGATCCCGC...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCTGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGAWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAGGGACTGGTTCTTTCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: QGLVLSPDDLAWLNHSSIWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...AATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGAAAGAACCAGTCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGAMRYTR*CQAVGS
Trigger: ACTGCCTACCGCCTGGCACAACCTGGTATATCGCAT...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TCACCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SPDDLAWLNHSSIWAFSPMRYTR*CQAVGS
Trigger: ACTGCCTACCGCCTGGCACAACCTGGTATATCGCAT...GGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTATGCGATATACCAGGTaGTGCCAGGCGGTAGGCAGT +
Preference number: 5 (lower is better)
Translates to: NPLPYPAKPAPGKEKVLFMRYTR*CQAVGS
Trigger: ACTGCCTACCGCCTGGCACAACCTGGTATATCGCAT...AAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 5 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFEGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGGAATGTGGCCAATTATATGCACTTTGTCTCCTCGATCCTCAGCAGCCTGAAGGAAGGTCTGGAAAAGTaGCATGTCGCCCCGCATGCG +
Preference number: 5 (lower is better)
Translates to: GNVANYMHFVSSILSSLKEGLEK*HVAPHA
Trigger: CGCATGCGGGGCGACATGCAACTTTTCCAGACCTTC...CTTCAGGCTGCTGAGGATCGAGGAGACAAAGTGCATATAATTGGCCACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS CCA 90 bp TACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACCTGAGGGTGCGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: YNSVIIPAPALQTVP*GNVANYMHLRVRRA
Trigger: AGCCCTGCGCACCCTCAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533123.5
CDS CCA 90 bp CCCCAATTCTCCACCATGTCATCCTCAAAGAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTTG +
Preference number: 5 (lower is better)
Translates to: PQFSTMSSSKRWTMD*HTAGGAIFSRLHSL
Trigger: CAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGAATTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS-3UTR CAA 90 bp TGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTCCCACGCGAGCCACATaGGGTTCCTTCTTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: WLNHSSIWAFSPFPTSRTPTRAT*GSFFSP
Trigger: CGGGCTGAAGAAGGAACCCAATGTGGCTCGCGTGGG...AGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: HLGFFTLSYIKNFPKCGPSRLHS*MATEPT
Trigger: CGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCT...GGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: AFGLFHPFLHQELSQMWAEVDNG*AHGRWC
Trigger: GCACCACCTGCCGTGTGCCAATCCATTGTCCACCTC...GGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: WAFSPFPTSRTFPNVGPGAGSVE*IKSQKF
Trigger: GAACTTCTGGCTCTTGATCAACTCCACGGATCCCGC...CCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGTGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: WAFSPFPTSRTFPNVGPGWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...CCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GGCAGTGTCAACTTAGGCCTCTACTCCATGGCTGTGAAAGGACAGCAGCCTCAAGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: GSVNLGLYSMAVKGQQPQDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...TTGAGGCTGCTGTCCTTTCACAGCCATGGAGTAGAGGCCTAAGTTGACACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS GCA 90 bp CTCCAGCTCTTCAGACAGTGCCCTGGGGGAATGTGGCCAATTATATaGACCTTTCTTTTCCCTTCCTGGGTTTCCACGGACGATAAGTAC +
Preference number: 5 (lower is better)
Translates to: LQLFRQCPGGMWPII*TFLFPSWVSTDDKY
Trigger: GTACTTATCGTCCGTGGAAACCCAGGAAGGGAAAAGAAAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526280.1
CDS-3UTR CAA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKAGSVE*IKSQKF
Trigger: GAACTTCTGGCTCTTGATCAACTCCACGGATCCCGC...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CAA 90 bp AGGTCTGGAAAAGTTGCATGTCGCCCCGCATGCGATATACCAGGTTGTGCCAGGCCAATTATATGCACTTaGTCTCCTCGATCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSGKVACRPACDIPGCARPIICT*SPRSSA
Trigger: TGCTGAGGATCGAGGAGACAAAGTGCATATAATTGG...CCTGGCACAACCTGGTATATCGCATGCGGGGCGACATGCAACTTTTCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GTAGTTTCCATCTATTTGGTACACACGGTAACCAGGATTAAGGCCGATGTAGGTAGCAAAACAGTGGCCTaGGCCACAGGCTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: VVSIYLVHTVTRIKADVGSKTVA*ATGSGP
Trigger: AGGCCCAGAGCCTGTGGCCAAGGCCACTGTTTTGCT...ACCTACATCGGCCTTAATCCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGTGGGCCCTGGGGCCGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: AFSPFPTSRTFPNVGPGADDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...GGCCCCAGGGCCCACATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGTTCTTCAGCCCGAGGTaGATGGCGGTGAATAGACCT +
Preference number: 5 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKFFSPR*MAVNRP
Trigger: AGGTCTATTCACCGCCATCAACCTCGGGCTGAAGAA...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: LNHSSIWAFSPFPTSRTFSRLHS*MATEPT
Trigger: CGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCT...GAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CTCATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGGGGGGAGGGAAGCTATaGACAGGTGTGCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LIPGYNSVIIPAPALQTVGGGKL*TGVLSW
Trigger: CCATGAAAGCACACCTGTCAATAGCTTCCCTCCCCC...CACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTATGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp ACCCCCTCCCATATCCAGCTAAACCAGCTCCAGGAAAGGAGAAGGTCCTGTTTCGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 5 (lower is better)
Translates to: TPSHIQLNQLQERRRSCFVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...GAAACAGGACCTTCTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CAAGTCTCTTATCTTTATTTTAACAGACTGGCAGCATCAGGTCGCAGCAGCAGTTGGCTCCCGGTATGTTaGCCTGGGTCAGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: QVSYLYFNRLAASGRSSSWLPVC*PGSDSG
Trigger: TCCTGAATCTGACCCAGGCAAACATACCGGGAGCCA...ACTGCTGCTGCGACCTGATGCTGCCAGTCTGTTAAAATAAAGATAAGAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp ATACCTGGCTACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: IPGYNSVIIPAPALQTVPDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...GGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTAGCCAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp CCGGATGATCTTGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCAATTATATGCACTTaGTCTCCTCGATCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PDDLAWLNHSSIWAFSPFPIICT*SPRSSA
Trigger: TGCTGAGGATCGAGGAGACAAAGTGCATATAATTGG...AAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS CCA 90 bp TACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACCTTTCTTTTCCCTTCCTG +
Preference number: 5 (lower is better)
Translates to: YNSVIIPAPALQTVP*GNVANYMHLSFPFL
Trigger: CAGGAAGGGAAAAGAAAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526280.1
CDS-3UTR CAA 90 bp TCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAATTCTTCAGCCCGAGGTaGATGGCGGTGAATAGACCT +
Preference number: 5 (lower is better)
Translates to: SESLHHRRPQIHPHECGQFFSPR*MAVNRP
Trigger: AGGTCTATTCACCGCCATCAACCTCGGGCTGAAGAA...TTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGCTATCTTCAGCAGATaGCACAGCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFAIFSR*HSLMAT
Trigger: CGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGGCTATCTTCAGCAGATaGCACAGCTTGATGGCCACG +
Preference number: 5 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMAIFSR*HSLMAT
Trigger: CGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGC...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGCCAATTATATGCACTTaGTCTCCTCGATCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKPIICT*SPRSSA
Trigger: TGCTGAGGATCGAGGAGACAAAGTGCATATAATTGG...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS-3UTR CAA 90 bp TGCCTGGTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 5 (lower is better)
Translates to: CLVEPQQHLGFFTLSYIKVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...CTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAACCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp ATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCCAAAGAACTGAGCAGCGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: IIEDLKFIHMSVAKELSSEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...GCTGCTCAGTTCTTTGGCCACACTCATGTGGATGAATTTGAGGTCTTCTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 90 bp TACAATTCGGTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACCTAGTAGGGAGAATTAAG +
Preference number: 5 (lower is better)
Translates to: YNSVIIPAPALQTVP*GNVANYMHLVGRIK
Trigger: CTTAATTCTCCCTACTAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTACCGAATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532367.1
CDS-3UTR CAA 90 bp GGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGGCGTAGTTTCCATCTATTaGGTACACACGGTAACCAGG +
Preference number: 5 (lower is better)
Translates to: GSESLHHRRPQIHPHECGVVSIY*VHTVTR
Trigger: CCTGGTTACCGTGTGTACCAAATAGATGGAAACTAC...GCCACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp ACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTCCCAAATGGAACCACAGCAGCATTaGGGCTTTTTCACCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TAAFGLFHPFLHQELSQMEPQQH*GFFTLS
Trigger: GGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTC...CATTTGGGAAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GTTGAACCACAGCAGCATTTGGGCTTTTTCACCCTTTCCTACATCAAGAACTTTGATGATCTTGCCTGGTaGAACCACAGCAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: VEPQQHLGFFTLSYIKNFDDLAW*NHSSIW
Trigger: CCAAATGCTGCTGTGGTTCAACCAGGCAAGATCATC...AAAGTTCTTGATGTAGGAAAGGGTGAAAAAGCCCAAATGCTGCTGTGGTTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS-3UTR CAA 90 bp GCCGGCTCAGAGTCTCTTCATCATAGAAGACCTCAAATTCATCCACATGAGTGTGTAGTTTCCATCTATTaGGTACACACGGTAACCTGC +
Preference number: 5 (lower is better)
Translates to: AGSESLHHRRPQIHPHECVVSIY*VHTVTC
Trigger: GCAGGTTACCGTGTGTACCAAATAGATGGAAACTAC...ACACTCATGTGGATGAATTTGAGGTCTTCTATGATGAAGAGACTCTGAGCCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS TCA 72 bp CTGCTCCCGGCCGGACCTGGGGCAGCTCTGGCGGAGTaGCGCTCCGTAGCGGGGCATTGTCGCGCTTCCTAC +
Preference number: 6 (lower is better)
Translates to: LLPAGPGAALAE*RSVAGHCRASY
Trigger: GTAGGAAGCGCGACAATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGCCCCAGGTCCGGCCGGGAGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000533196.1
ENST00000534405.5
CDS TCA 72 bp GCCGGGGACACCCGATTACCCTTCTCTGTAGTCGGCTaGCTGCTCCGCGGCCGGCCGCAAAGCAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: AGDTRLPFSVVG*LLRGRPQSSSA
Trigger: GGCGGAGCTGCTTTGCGGCCGGCCGCGGAGCAGTCAGCCGACTACAGAGAAGGGTAATCGGGTGTCCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533196.1
CDS CCA 72 bp GTCACACTTGCTGTATTCGCCCCAGTATCCGGCACCTaGCCGGGATGCGGGCGGCAGGCCAGAACCCCGGCG +
Preference number: 6 (lower is better)
Translates to: VTLAVFAPVSGT*PGCGRQARTPA
Trigger: CGCCGGGGTTCTGGCCTGCCGCCCGCATCCCGGCCAGGTGCCGGATACTGGGGCGAATACAGCAAGTGTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS GCA 72 bp CGGCAGGCCAGAACCCCGGCGGCAGCACAGTGGGTCTaGACAGTCAGGGTCCGTGCCCTCCAGGTAGTCATG +
Preference number: 6 (lower is better)
Translates to: RQARTPAAAQWV*TVRVRALQVVM
Trigger: CATGACTACCTGGAGGGCACGGACCCTGACTGTGCAGACCCACTGTGCTGCCGCCGGGGTTCTGGCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp GCAGGGCTTCGGCAGGCAGCCAGGGCTCCCAAGCCTTaGCCATCGCTTCATAGAGCCAGCGGGAGGAGTGGT +
Preference number: 6 (lower is better)
Translates to: AGLRQAARAPKP*PSLHRASGRSG
Trigger: ACCACTCCTCCCGCTGGCTCTATGAAGCGATGGCCAAGGCTTGGGAGCCCTGGCTGCCTGCCGAAGCCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS CAA 72 bp GGCAGCTCTGGCGGAGTGACGCTCCGTAGCGGGGCATaGTCGCGCTTCCTACACGGGGCTGGTTCGTCTGTC +
Preference number: 6 (lower is better)
Translates to: GSSGGVTLRSGA*SRFLHGAGSSV
Trigger: GACAGACGAACCAGCCCCGTGTAGGAAGCGCGACAATGCCCCGCTACGGAGCGTCACTCCGCCAGAGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000533196.1
ENST00000534405.5
CDS TCA 72 bp CTGGCACTGGCCCCAGGAACTTCCTCACAAGTGCTGTaGCGGTGGTCAGGGCCCGCAGTTGGTCCTGACGAG +
Preference number: 6 (lower is better)
Translates to: LALAPGTSSQVL*RWSGPAVGPDE
Trigger: CTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS TCA 72 bp AGTGCTGTGACGGTGGTCAGGGCCCGCAGTTGGTCCTaGCGAGTCTGGTGCCAGACATCATGTGCGGGGATG +
Preference number: 6 (lower is better)
Translates to: SAVTVVRARSWS*RVWCQTSCAGM
Trigger: CATCCCCGCACATGATGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS GCA 72 bp AGGGTAACTCCAGGGAGGGGCCACACATCCTGCCCATaGTTTGCAGGCTCTGGCTCCAACCTCCTTCCCCTA +
Preference number: 6 (lower is better)
Translates to: RVTPGRGHTSCP*FAGSGSNLLPL
Trigger: TAGGGGAAGGAGGTTGGAGCCAGAGCCTGCAAAGCATGGGCAGGATGTGTGGCCCCTCCCTGGAGTTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531336.1
CDS CCA 72 bp GTCTCCTGTCCAGTACACCATATCAAAAGGGCCGGCTaGGCCCAGCCCACTCAACAGGCTCTCCAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: VSCPVHHIKRAG*AQPTQQALQGP
Trigger: AGGACCCTGGAGAGCCTGTTGAGTGGGCTGGGCCCAGCCGGCCCTTTTGATATGGTGTACTGGACAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS CAA 72 bp CCTCACAAGTGCTGTGACGGTGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTGCCAGACATCATGTGC +
Preference number: 6 (lower is better)
Translates to: PHKCCDGGQGPQ*VLTSLVPDIMC
Trigger: GCACATGATGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACTTGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS CAA 90 bp CAGGAACTTCCTCACAAGTGCTGTGACGGTGGTCAGGGCCCGCAGTaGGTCCTGACGAGTCTGGTGCCAGACATCATGTGCGGGGATGTC +
Preference number: 6 (lower is better)
Translates to: QELPHKCCDGGQGPQ*VLTSLVPDIMCGDV
Trigger: GACATCCCCGCACATGATGTCTGGCACCAGACTCGTCAGGACCAACTGCGGGCCCTGACCACCGTCACAGCACTTGTGAGGAAGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS TCA 72 bp CGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTTaGTGGCCACGGAGCCCACGCGAGCCACATTGGGTT +
Preference number: 6 (lower is better)
Translates to: RQVVLSSADCTA*WPRSPREPHWV
Trigger: AACCCAATGTGGCTCGCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp AGACATCTCGGAGCCGGGGCACTATGCGATGTAACCTaGCAGGATGGCCTTGGGGAGAAAGAGGGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: RHLGAGALCDVT*QDGLGEKEGEP
Trigger: AGGCTCACCCTCTTTCTCCCCAAGGCCATCCTGCCAGGTTACATCGCATAGTGCCCCGGCTCCGAGATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CAA 72 bp ACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACGCGAGCCACATTGGGT +
Preference number: 6 (lower is better)
Translates to: TAGGAIFSRLHS*MATEPTRATLG
Trigger: ACCCAATGTGGCTCGCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CAA 90 bp GATTGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACGCGAGCCACATTGGGTTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: DWHTAGGAIFSRLHS*MATEPTRATLGSFS
Trigger: GCTGAAGGAACCCAATGTGGCTCGCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS CAA 90 bp GATTGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTaGATGGCCACGGAGCCCACGCGAGCCACATTGGGTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: DWHTAGGAIFSRLHS*MATEPTRATLGSFF
Trigger: GAAGAAGGAACCCAATGTGGCTCGCGTGGGCTCCGTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp GCTTTCATGGTTACCCACAGCAGGGTACACTGGCACTaGCCCCAGGAACTTCCTCACAAGTGCTGTGACGGT +
Preference number: 6 (lower is better)
Translates to: AFMVTHSRVHWH*PQELPHKCCDG
Trigger: ACCGTCACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTGGGTAACCATGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS CAA 72 bp TCCTTCAGCCCGAGGTTGATGGCGGTGAATAGACCTTaGCAGATTGGGCAGGTGAGGTTCCCCCACCCAAAG +
Preference number: 6 (lower is better)
Translates to: SFSPRLMAVNRP*QIGQVRFPHPK
Trigger: CTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCAAAGGTCTATTCACCGCCATCAACCTCGGGCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS CAA 90 bp TTGGGTTCCTTCTTCAGCCCGAGGTTGATGGCGGTGAATAGACCTTaGCAGATTGGGCAGGTGAGGTTCCCCCACCCAAAGACATCTCGG +
Preference number: 6 (lower is better)
Translates to: LGSFFSPRLMAVNRP*QIGQVRFPHPKTSR
Trigger: CCGAGATGTCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCAAAGGTCTATTCACCGCCATCAACCTCGGGCTGAAGAAGGAACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CAA 90 bp ACATTGGGTTCCTTCAGCCCGAGGTTGATGGCGGTGAATAGACCTTaGCAGATTGGGCAGGTGAGGTTCCCCCACCCAAAGACATCTCGG +
Preference number: 6 (lower is better)
Translates to: TLGSFSPRLMAVNRP*QIGQVRFPHPKTSR
Trigger: CCGAGATGTCTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCAAAGGTCTATTCACCGCCATCAACCTCGGGCTGAAGGAACCCAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527275.5
CDS CCA 72 bp AGGTGTGCTTTCATGGTTACCCACAGCAGGGTACACTaGCACTGGCCCCAGGAACTTCCTCACAAGTGCTGT +
Preference number: 6 (lower is better)
Translates to: RCAFMVTHSRVH*HWPQELPHKCC
Trigger: ACAGCACTTGTGAGGAAGTTCCTGGGGCCAGTGCCAGTGTACCCTGCTGTGGGTAACCATGAAAGCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS CAA 72 bp TTCTTCAGCCCGAGGTTGATGGCGGTGAATAGACCTTaGCAGATTGGGCAGGTGAGGTTCCCCCACCCAAAG +
Preference number: 6 (lower is better)
Translates to: FFSPRLMAVNRP*QIGQVRFPHPK
Trigger: CTTTGGGTGGGGGAACCTCACCTGCCCAATCTGCAAAGGTCTATTCACCGCCATCAACCTCGGGCTGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS TCA 72 bp CCAGCCACTGGAGCTGTCCTGCGGGATCCGTGGAGTTaGTCAAGAGCCAGAAGTTCTCACGGGAACAAAAAT +
Preference number: 6 (lower is better)
Translates to: PATGAVLRDPWS*SRARSSHGNKN
Trigger: ATTTTTGTTCCCGTGAGAACTTCTGGCTCTTGATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS CAA 72 bp ACCAGCCACTGGAGCTGTCCTGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTCTCACGGGAACAAAAA +
Preference number: 6 (lower is better)
Translates to: TSHWSCPAGSVE*IKSQKFSREQK
Trigger: TTTTTGTTCCCGTGAGAACTTCTGGCTCTTGATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS CAA 90 bp AGCTCCCCCACCAGCCACTGGAGCTGTCCTGCGGGATCCGTGGAGTaGATCAAGAGCCAGAAGTTCTCACGGGAACAAAAATTCATATTG +
Preference number: 6 (lower is better)
Translates to: SSPTSHWSCPAGSVE*IKSQKFSREQKFIL
Trigger: CAATATGAATTTTTGTTCCCGTGAGAACTTCTGGCTCTTGATCAACTCCACGGATCCCGCAGGACAGCTCCAGTGGCTGGTGGGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000534405.5
CDS GCA 72 bp AAAGAGGTGGACAATGGATTGGCACACGGCAGGTGGTaGTATCTTCAGCAGATTGCACAGCTTGATGGCCAC +
Preference number: 6 (lower is better)
Translates to: KEVDNGLAHGRW*YLQQIAQLDGH
Trigger: GTGGCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS GCA 72 bp CAGTTGGTCCTGACGAGTCTGGTGCCAGACATCATGTaGGGGGATGTCTCCTGTCCAGTACACCATATCAAA +
Preference number: 6 (lower is better)
Translates to: QLVLTSLVPDIM*GDVSCPVHHIK
Trigger: TTTGATATGGTGTACTGGACAGGAGACATCCCCGCACATGATGTCTGGCACCAGACTCGTCAGGACCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342245.9
ENST00000526280.1
ENST00000527275.5
ENST00000530395.1
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp CTCAAAGAGGTGGACAATGGATTGGCACACGGCAGGTaGTGCTATCTTCAGCAGATTGCACAGCTTGATGGC +
Preference number: 6 (lower is better)
Translates to: LKEVDNGLAHGR*CYLQQIAQLDG
Trigger: GCCATCAAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp ACACCTCCACCATGTCATCCTCAAAGAGGTGGACAATaGATTGGCACACGGCAGGTGGTGCTATCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: TPPPCHPQRGGQ*IGTRQVVLSSA
Trigger: TGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp CAGCTCCAGCTCTTCAGACAGTGCCCTGGGGGAATGTaGCCAATTATATGCACCTTTCTTTTCCCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: QLQLFRQCPGGM*PIICTFLFPSW
Trigger: CCAGGAAGGGAAAAGAAAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526280.1
CDS CAA 90 bp TCTCCACACCTCCACCATGTCATCCTCAAAGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTT +
Preference number: 6 (lower is better)
Translates to: SPHLHHVILKEVDNG*AHGRWCYLQQIAQL
Trigger: AAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGGTGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000533123.5
ENST00000534405.5
CDS CAA 90 bp CCCCCAATTCTCCACCATGTCATCCTCAAAGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGCTATCTTCAGCAGATTGCACAGCTT +
Preference number: 6 (lower is better)
Translates to: PPILHHVILKEVDNG*AHGRWCYLQQIAQL
Trigger: AAGCTGTGCAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGAATTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS GCA 72 bp TTCAGACAGTGCCCTGGGGGAATGTGGCCAATTATATaGACCTTTCTTTTCCCTTCCTGGGTTTCCACGGAC +
Preference number: 6 (lower is better)
Translates to: FRQCPGGMWPII*TFLFPSWVSTD
Trigger: GTCCGTGGAAACCCAGGAAGGGAAAAGAAAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526280.1
CDS CCA 72 bp TCCACCATGTCATCCTCAAAGAGGTGGACAATGGATTaGCACACGGCAGGTGGTGCTATCTTCAGCAGATTG +
Preference number: 6 (lower is better)
Translates to: STMSSSKRWTMD*HTAGGAIFSRL
Trigger: CAATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp GTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACCTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: VIIPAPALQTVP*GNVANYMHLRV
Trigger: CACCCTCAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533123.5
CDS CAA 72 bp CTCCACCATGTCATCCTCAAAGAGGTGGACAATGGATaGGCACACGGCAGGTGGTGCTATCTTCAGCAGATT +
Preference number: 6 (lower is better)
Translates to: LHHVILKEVDNG*AHGRWCYLQQI
Trigger: AATCTGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342245.9
ENST00000527275.5
ENST00000531303.5
ENST00000533123.5
ENST00000534405.5
CDS CCA 72 bp AATTCTCCACCATGTCATCCTCAAAGAGGTGGACAATaGATTGGCACACGGCAGGTGGTGCTATCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: NSPPCHPQRGGQ*IGTRQVVLSSA
Trigger: TGCTGAAGATAGCACCACCTGCCGTGTGCCAATCCATTGTCCACCTCTTTGAGGATGACATGGTGGAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531303.5
CDS CCA 72 bp GTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACCTAGTAGGG +
Preference number: 6 (lower is better)
Translates to: VIIPAPALQTVP*GNVANYMHLVG
Trigger: CCCTACTAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532367.1
CDS CCA 72 bp GTAATAATTCCAGCTCCAGCTCTTCAGACAGTGCCCTaGGGGAATGTGGCCAATTATATGCACCTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: VIIPAPALQTVP*GNVANYMHLSF
Trigger: AAAAGAAAGGTGCATATAATTGGCCACATTCCCCCAGGGCACTGTCTGAAGAGCTGGAGCTGGAATTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526280.1