RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMOC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198732

Ensembl transcript IDs: ENST00000361956.8, ENST00000381280.4, ENST00000553839.1, ENST00000555917.1, ENST00000557483.1

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTACAGGCAGGCGCCGTCTCCATGTGTGCATGCTTCCTCCAGGCCTaGAAGTGGGGCCAGTGTCTCGTGCAAGGCCCACTCAGCTCCGGC +
Preference number: 1 (lower is better)
Translates to: LQAGAVSMCACFLQA*KWGQCLVQGPLSSG
Trigger: GCCGGAGCTGAGTGGGCCTTGCACGAGACACTGGCCCCACTTTCAGGCCTGGAGGAAGCATGCACACATGGAGACGGCGCCTGCCTGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp TGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATaGACGGACCCTCTGAGAGCCGGTACCTGTGTGGGCTATTCATGG +
Preference number: 1 (lower is better)
Translates to: CTHQCWALWGSGEQE*TDPLRAGTCVGYSW
Trigger: CCATGAATAGCCCACACAGGTACCGGCTCTCAGAGGGTCCGTGCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp GGAGATGGAGGAGTGGAGAGGTCACACCCAATCTGCCCCTGGCACTaGGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGG +
Preference number: 1 (lower is better)
Translates to: GDGGVERSHPICPWH*DSCVSGSLTGRFAG
Trigger: CCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTCAGTGCCAGGGGCAGATTGGGTGTGACCTCTCCACTCCTCCATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp CCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTaGTGCCTGTGGAAAGCTGGGCCGGGATTTCCCTGTAGCTGGGTT +
Preference number: 1 (lower is better)
Translates to: PEGWAAHPRIRGRCL*CLWKAGPGFPCSWV
Trigger: AACCCAGCTACAGGGAAATCCCGGCCCAGCTTTCCACAGGCATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp GGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGTTTCCCTGTTaGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: GASLVGLQGGEEFPC*HRTPQCRLSVLSPP
Trigger: GGGAGGGGACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp GACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTaGAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTC +
Preference number: 1 (lower is better)
Translates to: DSCVSGSLTGRFAGR*RVSLLAPHPSVQAF
Trigger: GAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp AGTGGGGCCAGTGTCTCGTGCAAGGCCCACTCAGCTCCGGCACGTTaGGTTCTCTCATTGGGGCTAATGGGAGAAGGCTTCCTTCCCACC +
Preference number: 1 (lower is better)
Translates to: SGASVSCKAHSAPAR*VLSLGLMGEGFLPT
Trigger: GGTGGGAAGGAAGCCTTCTCCCATTAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGAGTGGGCCTTGCACGAGACACTGGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp TGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCTTGTGGTaGCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTTAGGG +
Preference number: 1 (lower is better)
Translates to: CPEKVVLLPQGQCLW*QRLPDPERVEVLLG
Trigger: CCCTAAAAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp ATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTaGTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTA +
Preference number: 1 (lower is better)
Translates to: IRSCPEKVVLLPQGQ*LWCQRLPDPERVEV
Trigger: TACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp AATTTGCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTaGGCCCTTTGGGGGTCCGGAGAGCAGGAATGCACGGACCCTCTG +
Preference number: 1 (lower is better)
Translates to: NLLRGSLRYWCTHQC*ALWGSGEQECTDPL
Trigger: CAGAGGGTCCGTGCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGCAAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp TCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCTTGTaGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTTA +
Preference number: 1 (lower is better)
Translates to: SCPEKVVLLPQGQCL*CQRLPDPERVEVLL
Trigger: TAAAAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp GATAATTTGCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATaGTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATGCACGGACCCT +
Preference number: 1 (lower is better)
Translates to: DNLLRGSLRYWCTHQ*WALWGSGEQECTDP
Trigger: AGGGTCCGTGCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGCAAATTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp TGTCGGGTTGGAATACAAGATGAGGCCAGATTTGCAAGGGTGATCTaGGGAGGGGACCAGTCCAGGGCTACCCAACCTCCCTCACTGCCA +
Preference number: 1 (lower is better)
Translates to: CRVGIQDEARFARVI*GGDQSRATQPPSLP
Trigger: TGGCAGTGAGGGAGGTTGGGTAGCCCTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACCCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp AGGGATGTCGGGTTGGAATACAAGATGAGGCCAGATTTGCAAGGGTaGTCTGAGGAGGGGACCAGTCCAGGGCTACCCAACCTCCCTCAC +
Preference number: 1 (lower is better)
Translates to: RDVGLEYKMRPDLQG*SEEGTSPGLPNLPH
Trigger: GTGAGGGAGGTTGGGTAGCCCTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACCCGACATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp ATCTCGAAGATCCAAACATCTACAGGCAGGCGCCGTCTCCATGTGTaGATGCTTCCTCCAGGCCTGAAAGTGGGGCCAGTGTCTCGTGCA +
Preference number: 1 (lower is better)
Translates to: ISKIQTSTGRRRLHV*MLPPGLKVGPVSRA
Trigger: TGCACGAGACACTGGCCCCACTTTCAGGCCTGGAGGAAGCATGCACACATGGAGACGGCGCCTGCCTGTAGATGTTTGGATCTTCGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp AACATGGTGGGCACCACTTATGTTACACGGGATGTGGCAGGGCCATaGGCAACGCTGAAGGTTAGGTGTCTGGTGATCCATCCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: NMVGTTYVTRDVAGP*ATLKVRCLVIHPAS
Trigger: GGAGGCAGGATGGATCACCAGACACCTAACCTTCAGCGTTGCCCATGGCCCTGCCACATCCCGTGTAACATAAGTGGTGCCCACCATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp AACCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATaGCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCAGGCGCC +
Preference number: 1 (lower is better)
Translates to: NHTTPPTHTILWETR*LGRSRRSKHLQAGA
Trigger: GGCGCCTGCCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp TGCAAATCCTTTGTGGATAATTTGCTCCGAGGGTCACTAAGATACTaGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAG +
Preference number: 1 (lower is better)
Translates to: CKSFVDNLLRGSLRY*CTHQCWALWGSGEQ
Trigger: CTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGCAAATTATCCACAAAGGATTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp ACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTaGGGAGATCTCGAAGATCCAAACATCTACAGGCAGGCGCCGTCT +
Preference number: 1 (lower is better)
Translates to: TQHHLHTRSCGRQDA*GDLEDPNIYRQAPS
Trigger: AGACGGCGCCTGCCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 90 bp GAACGGGTGGAGGTACTTTTAGGGATGTCGGGTTGGAATACAAGATaGGGCCAGATTTGCAAGGGTGATCTGAGGAGGGGACCAGTCCAG +
Preference number: 1 (lower is better)
Translates to: ERVEVLLGMSGWNTR*GQICKGDLRRGPVQ
Trigger: CTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACCCGACATCCCTAAAAGTACCTCCACCCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp AAATCCTTTGTGGATAATTTGCTCCGAGGGTCACTAAGATACTGGTaGACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAA +
Preference number: 1 (lower is better)
Translates to: KSFVDNLLRGSLRYW*THQCWALWGSGEQE
Trigger: TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGCAAATTATCCACAAAGGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 90 bp ATAGTCCTCCCACCAGAAAAGAACTCGTGGAGTCCGCAGTACAATTaGAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGA +
Preference number: 1 (lower is better)
Translates to: IVLPPEKNSWSPQYN*RTPVFIHKGQSPNR
Trigger: TCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGGTGGGAGGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 90 bp CTAATGGCATGGGGCAATATAGTCCTCCCACCAGAAAAGAACTCGTaGAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAG +
Preference number: 1 (lower is better)
Translates to: LMAWGNIVLPPEKNS*SPQYNCRTPVFIHK
Trigger: CTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGGTGGGAGGACTATATTGCCCCATGCCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCTGGTGCACCCACCAATaGTGGGCCCTTTGGGGGTCC +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAWCTHQ*WALWGS
Trigger: GGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCA...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCGCGGAAGATGCCTGTaGTGCCTGTGGAAAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKARGRCL*CLWKAG
Trigger: CCCAGCTTTCCACAGGCATCACAGGCATCTTCCGCG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTGCACCCACCAATGCTaGGCCCTTTGGGGGTCCGGA +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLCTHQC*ALWGSG
Trigger: TCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 90 bp CCTGGCACTGAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTaGCAGGGAGGTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAG +
Preference number: 2 (lower is better)
Translates to: PGTETAASLGASLVG*QGGEEFPCWHRTPQ
Trigger: CTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTCAGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTAATGCACGGACCCTCTaGGAGCCGGTACCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: HCHHSCLWEGALRATCCSNARTL*EPVPVW
Trigger: CCACACAGGTACCGGCTCTCAGAGGGTCCGTGCATT...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATATCTGCCCCTGGCACTaGGACAGCTGCGTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SDQKAGQPTLESAEDACDICPWH*DSCVSG
Trigger: CCCAGAGACGCAGCTGTCTCAGTGCCAGGGGCAGAT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCTACCAACAAGGTGACTaGCACCTCCCCCAACCCACC +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAYQQGD*HLPQPT
Trigger: GGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTA...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCCTGGACTCTCCACCTaGCCTTGGGTTTTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAPGLST*PWVFCS
Trigger: GGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTCCATCCTGCCTCCCTaGACTCTCCACCTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLSILPP*TLHLPL
Trigger: CAAGGGCAGGTGGAGAGTCCAGGGAGGCAGGATGGA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCGAAGAGTTTCCCTGTTaGCACCGCACCCCTCAGTGC +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAEEFPC*HRTPQC
Trigger: GCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTC...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 90 bp AGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCTaGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTT +
Preference number: 2 (lower is better)
Translates to: RSCPEKVVLLPQGQC*WCQRLPDPERVEVL
Trigger: AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTTGGTGCACCCACCAATaGTGGGCCCTTTGGGGGTCC +
Preference number: 2 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCWCTHQ*WALWGS
Trigger: GGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCA...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGCACCGCACCCCTCAGTaGAGGCTTTCTGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: ETAASLGASLVGLQGGEEHRTPQ*RLSVLS
Trigger: GGACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTG...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTCCCAACCTCCCTCACTaGCACCACAGCTGCTTATGG +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLPNLPH*HHSCLW
Trigger: CCATAAGCAGCTGTGGTGGCAGTGAGGGAGGTTGGG...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTCCATCCTGCCTCCCTaGACTCTCCACCTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: SDQKAGQPTLESAEDACDSILPP*TLHLPL
Trigger: CAAGGGCAGGTGGAGAGTCCAGGGAGGCAGGATGGA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTTTAGCCCAACCTCCCTaGACAAGGCCGAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: HCHHSCLWEGALRATCCSLAQPP*TRPRAK
Trigger: CTTGGCTCTCGGCCTTGTCCAGGGAGGTTGGGCTAA...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATCAATGCTGGGCCCTTTaGGGGTCCGGAGAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: SDQKAGQPTLESAEDACDQCWAL*GSGEQE
Trigger: TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTG...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTCTCAGACCAGAAGGCTaGGCAGCCCACCCTAGAATC +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLLRPEG*AAHPRI
Trigger: GATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGAG...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 90 bp AAGTGGGGCCAGTGTCTCGTGCAAGGCCCACTCAGCTCCGGCACGTaGAGTTCTCTCATTGGGGCTAATGGGAGAAGGCTTCCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: KWGQCLVQGPLSSGT*SSLIGANGRRLPSH
Trigger: GTGGGAAGGAAGCCTTCTCCCATTAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGAGTGGGCCTTGCACGAGACACTGGCCCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGAATGCACGGACCCTCTaGGAGCCGGTACCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGENARTL*EPVPVW
Trigger: CCACACAGGTACCGGCTCTCAGAGGGTCCGTGCATT...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCGGATTTCCCTGTAGCTaGGTTATCACCCCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAGFPCS*VITPAL
Trigger: AAGGGCAGGGGTGATAACCCAGCTACAGGGAAATCC...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGATGTGGCAGGGCCATaGGCAACGCTGAAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSDVAGP*ATLKVR
Trigger: CCTAACCTTCAGCGTTGCCCATGGCCCTGCCACATC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTATGTTACACGGGATGTaGCAGGGCCATGGGCAACGC +
Preference number: 2 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCMLHGM*QGHGQR
Trigger: GCGTTGCCCATGGCCCTGCCACATCCCGTGTAACAT...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGCTATTCATGGGATCTaGACTCCCTTCCTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLAIHGI*TPFLSQ
Trigger: CTGGGAGAGGAAGGGAGTCCAGATCCCATGAATAGC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGGGTCACTAAGATACTaGTGCACCCACCAATGCTGG +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLGSLRY*CTHQCW
Trigger: CCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCATCTGCCCCTGGCACTaGGACAGCTGCGTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTICPWH*DSCVSG
Trigger: CCCAGAGACGCAGCTGTCTCAGTGCCAGGGGCAGAT...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCGCCCATAAGAAAACTTaGGGGAACAGGAAGAACCTC +
Preference number: 2 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAAHKKT*GNRKNL
Trigger: GAGGTTCTTCCTGTTCCCTCAAGTTTTCTTATGGGC...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGTCAGCTCCGGCACGTTaGGTTCTCTCATTGGGGCTA +
Preference number: 2 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGESAPAR*VLSLGL
Trigger: TAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGA...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTCACTAAGATACTGGTaGACCCACCAATGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: SDQKAGQPTLESAEDACDSLRYW*THQCWA
Trigger: GGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGAGCCGGTACCTGTGTaGGCTATTCATGGGATCTGG +
Preference number: 2 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSEPVPV*AIHGIW
Trigger: CCAGATCCCATGAATAGCCCACACAGGTACCGGCTC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGGGGTCACTAAGATACTaGTGCACCCACCAATGCTGG +
Preference number: 2 (lower is better)
Translates to: ETAASLGASLVGLQGGEEGSLRY*CTHQCW
Trigger: CCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCC...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTTGCCTCCCCTCTCATaGGTTATACAGAGTAGATGC +
Preference number: 2 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLLPPLS*VIQSRC
Trigger: GCATCTACTCTGTATAACGCATGAGAGGGGAGGCAA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGGACAGTGCTTGTGGTaGCAACGCCTTCCAGACCCG +
Preference number: 2 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRGQCLW*QRLPDP
Trigger: CGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCAGGTTAGGTGTCTGGTaGTCCATCCTGCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTRLGVW*SILPPW
Trigger: CCAGGGAGGCAGGATGGATCACCAGACACCTAACCT...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTAGGCCGAGAGCCAAGTaGCTTATCAATTTTGACAAC +
Preference number: 2 (lower is better)
Translates to: HCHHSCLWEGALRATCCSRPRAK*LINFDN
Trigger: GTTGTCAAAATTGATAAGTCACTTGGCTCTCGGCCT...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGATGTGGCAGGGCCATaGGCAACGCTGAAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSDVAGP*ATLKVR
Trigger: CCTAACCTTCAGCGTTGCCCATGGCCCTGCCACATC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACCCAGGATAGAGTCCTaGATTTTAGAAAGCTGGACT +
Preference number: 2 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEPRIES*ILESWT
Trigger: AGTCCAGCTTTCTAAAATCCAGGACTCTATCCTGGG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTTGTGTGGGCTATTCATaGGATCTGGACTCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCCVGYS*DLDSLP
Trigger: AGGAAGGGAGTCCAGATCCCATGAATAGCCCACACA...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGAGGTTAGGTGTCTGGTaGTCCATCCTGCCTCCCTGG +
Preference number: 2 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWRLGVW*SILPPW
Trigger: CCAGGGAGGCAGGATGGATCACCAGACACCTAACCT...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGTGACTTATCAATTTTaGCAACTAATGGCATGGGGC +
Preference number: 2 (lower is better)
Translates to: HCHHSCLWEGALRATCCSVTYQF*QLMAWG
Trigger: GCCCCATGCCATTAGTTGTCAAAATTGATAAGTCAC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGGTTGGAATACAAGATaGGGCCAGATTTGCAAGGGT +
Preference number: 2 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSGWNTR*GQICKG
Trigger: ACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAAAAAGTGCAAACATGGTaGGCACCACTTATGTTACAC +
Preference number: 2 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEKVQTW*APLMLH
Trigger: GTGTAACATAAGTGGTGCCCACCATGTTTGCACTTT...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTCCAGAAAAGAACTCGTaGAGTCCGCAGTACAATTGC +
Preference number: 2 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSPEKNS*SPQYNC
Trigger: GCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGG...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCAGAAAAGAACTCGTaGAGTCCGCAGTACAATTGC +
Preference number: 2 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLPEKNS*SPQYNC
Trigger: GCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGAGCCGGTACCTGTGTaGGCTATTCATGGGATCTGG +
Preference number: 2 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYREPVPV*AIHGIW
Trigger: CCAGATCCCATGAATAGCCCACACAGGTACCGGCTC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCAGTCCGCAGTACAATTaGAGGACTCCCGTCTTTATA +
Preference number: 2 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLSPQYN*RTPVFI
Trigger: TATAAAGACGGGAGTCCTGCAATTGTACTGCGGACT...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCAGGAGATGGAGGAGTaGAGAGGTCACACCCAATCT +
Preference number: 2 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRQEMEE*RGHTQS
Trigger: AGATTGGGTGTGACCTCTCCACTCCTCCATCTCCTG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTCCTGGACTCTCCACCTaGCCTTGGGTTTTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSPGLST*PWVFCS
Trigger: GGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGG...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCTTGCCTCCCCTCTCATaGGTTATACAGAGTAGATGC +
Preference number: 2 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTLPPLS*VIQSRC
Trigger: GCATCTACTCTGTATAACGCATGAGAGGGGAGGCAA...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 90 bp TATAGTCCTCCCACCAGAAAAGAACTCGTGGAGTCCGCAGTACAATaGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAG +
Preference number: 2 (lower is better)
Translates to: YSPPTRKELVESAVQ*QDSRLYTQGSVSKQ
Trigger: CTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGGTGGGAGGACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 90 bp CCCAACCTCCCTGGACAAGGCCGAGAGCCAAGTGACTTATCAATTTaGACAACTAATGGCATGGGGCAATATAGTCCTCCCACCAGAAAA +
Preference number: 2 (lower is better)
Translates to: PNLPGQGREPSDLSI*TTNGMGQYSPPTRK
Trigger: TTTTCTGGTGGGAGGACTATATTGCCCCATGCCATTAGTTGTCAAAATTGATAAGTCACTTGGCTCTCGGCCTTGTCCAGGGAGGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGAGGCCGAGAGCCAAGTaGCTTATCAATTTTGACAAC +
Preference number: 2 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRRPRAK*LINFDN
Trigger: GTTGTCAAAATTGATAAGTCACTTGGCTCTCGGCCT...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATAAACAGCAATGCCAATaGCTGTACAAAAGAACTATA +
Preference number: 2 (lower is better)
Translates to: SDQKAGQPTLESAEDACDKQQCQ*LYKRTI
Trigger: TATAGTTCTTTTGTACAGGCATTGGCATTGCTGTTT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAAGTGCAAACATGGTaGGCACCACTTATGTTACAC +
Preference number: 2 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSKVQTW*APLMLH
Trigger: GTGTAACATAAGTGGTGCCCACCATGTTTGCACTTT...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGAATGCAAATCCTTTGTaGATAATTTGCTCCGAGGGT +
Preference number: 2 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRNANPL*IICSEG
Trigger: ACCCTCGGAGCAAATTATCCACAAAGGATTTGCATT...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCTTAAAAGTGCAAACATaGTGGGCACCACTTATGTTA +
Preference number: 2 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTLKVQT*WAPLML
Trigger: TAACATAAGTGGTGCCCACCATGTTTGCACTTTTAA...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR GCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGCAATGCCAATaGCTGTACAAAAGAACTATA +
Preference number: 2 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSKQQCQ*LYKRTI
Trigger: TATAGTTCTTTTGTACAGGCATTGGCATTGCTGTTT...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGTTAAAAGTGCAAACATaGTGGGCACCACTTATGTTA +
Preference number: 2 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWLKVQT*WAPLML
Trigger: TAACATAAGTGGTGCCCACCATGTTTGCACTTTTAA...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp GAGGGGACCAGTCCAGGGCTACCCAACCTCCCTCACTaGCACCACAGCTGCTTATGGGAAGGGGCGCTAAGG +
Preference number: 3 (lower is better)
Translates to: EGTSPGLPNLPH*HHSCLWEGALR
Trigger: CCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTGAGGGAGGTTGGGTAGCCCTGGACTGGTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp GGAGTGGAGAGGTCACACCCAATCTGCCCCTGGCACTaGGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGG +
Preference number: 3 (lower is better)
Translates to: GVERSHPICPWH*DSCVSGSLTGR
Trigger: CCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTCAGTGCCAGGGGCAGATTGGGTGTGACCTCTCCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp TGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTaGTTGTGGTGCCAACGCCTTCCAGACCCGGAACGG +
Preference number: 3 (lower is better)
Translates to: CPEKVVLLPQGQ*LWCQRLPDPER
Trigger: CCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp GAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCTTGTaGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: EKVVLLPQGQCL*CQRLPDPERVE
Trigger: CTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp TGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTaGTGCCTGTGGAAAGCTGGGCCGGGATTTCCCTGT +
Preference number: 3 (lower is better)
Translates to: WAAHPRIRGRCL*CLWKAGPGFPC
Trigger: ACAGGGAAATCCCGGCCCAGCTTTCCACAGGCATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp CTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATaGTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATGC +
Preference number: 3 (lower is better)
Translates to: LRGSLRYWCTHQ*WALWGSGEQEC
Trigger: GCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp AAGGTTGTGCTCCTCCCACAGGGACAGTGCTTGTGGTaGCAACGCCTTCCAGACCCGGAACGGGTGGAGGTA +
Preference number: 3 (lower is better)
Translates to: KVVLLPQGQCLW*QRLPDPERVEV
Trigger: TACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp CTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTaGGGGTCCGGAGAGCAGGAATGCACGGACCCTCTG +
Preference number: 3 (lower is better)
Translates to: LRYWCTHQCWAL*GSGEQECTDPL
Trigger: CAGAGGGTCCGTGCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp CGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTaGGCCCTTTGGGGGTCCGGAGAGCAGGAATGCACG +
Preference number: 3 (lower is better)
Translates to: RGSLRYWCTHQC*ALWGSGEQECT
Trigger: CGTGCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp CCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTaGTCCTCCCACAGGGACAGTGCTTGTGGTGCCAAC +
Preference number: 3 (lower is better)
Translates to: PKTPSDPVPRRL*SSHRDSACGAN
Trigger: GTTGGCACCACAAGCACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp TGCCTGTGGAAAGCTGGGCCGGGATTTCCCTGTAGCTaGGTTATCACCCCTGCCCTTCTAGGGGAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: CLWKAGPGFPCS*VITPALLGEAE
Trigger: TTCTGCCTCCCCTAGAAGGGCAGGGGTGATAACCCAGCTACAGGGAAATCCCGGCCCAGCTTTCCACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTCACTGGTAGGTTaGCAGGGAGGTGAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: HCHHSCLWEGALRATCCSASLVG*QGGEEF
Trigger: AAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp ATCCAAACATCTACAGGCAGGCGCCGTCTCCATGTGTaGATGCTTCCTCCAGGCCTGAAAGTGGGGCCAGTG +
Preference number: 3 (lower is better)
Translates to: IQTSTGRRRLHV*MLPPGLKVGPV
Trigger: CACTGGCCCCACTTTCAGGCCTGGAGGAAGCATGCACACATGGAGACGGCGCCTGCCTGTAGATGTTTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp CTGGTAGGTTTGCAGGGAGGTGAAGAGTTTCCCTGTTaGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: LVGLQGGEEFPC*HRTPQCRLSVL
Trigger: CAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGAGTCCGCAGTACAATaGCAGGACTCCCGTCTTTAT +
Preference number: 3 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLESAVQ*QDSRLY
Trigger: ATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTCCCACCTTTCCACGTaGGGGCAGGGCCACCAGTCA +
Preference number: 3 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRSHLST*GQGHQS
Trigger: TGACTGGTGGCCCTGCCCCAACGTGGAAAGGTGGGA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp GGAATACAAGATGAGGCCAGATTTGCAAGGGTGATCTaGGGAGGGGACCAGTCCAGGGCTACCCAACCTCCC +
Preference number: 3 (lower is better)
Translates to: GIQDEARFARVI*GGDQSRATQPP
Trigger: GGGAGGTTGGGTAGCCCTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGGCCTCATCTTGTATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp AGTGTCTCGTGCAAGGCCCACTCAGCTCCGGCACGTTaGGTTCTCTCATTGGGGCTAATGGGAGAAGGCTTC +
Preference number: 3 (lower is better)
Translates to: SVSCKAHSAPAR*VLSLGLMGEGF
Trigger: GAAGCCTTCTCCCATTAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGAGTGGGCCTTGCACGAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp GTGGATAATTTGCTCCGAGGGTCACTAAGATACTGGTaGACCCACCAATGCTGGGCCCTTTGGGGGTCCGGA +
Preference number: 3 (lower is better)
Translates to: VDNLLRGSLRYW*THQCWALWGSG
Trigger: TCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGCAAATTATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGGCCTCACTGGTAGGTTaGCAGGGAGGTGAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEASLVG*QGGEEF
Trigger: AAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGC...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp GGGTTGGAATACAAGATGAGGCCAGATTTGCAAGGGTaGTCTGAGGAGGGGACCAGTCCAGGGCTACCCAAC +
Preference number: 3 (lower is better)
Translates to: GLEYKMRPDLQG*SEEGTSPGLPN
Trigger: GTTGGGTAGCCCTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp GGCACCACTTATGTTACACGGGATGTGGCAGGGCCATaGGCAACGCTGAAGGTTAGGTGTCTGGTGATCCAT +
Preference number: 3 (lower is better)
Translates to: GTTYVTRDVAGP*ATLKVRCLVIH
Trigger: ATGGATCACCAGACACCTAACCTTCAGCGTTGCCCATGGCCCTGCCACATCCCGTGTAACATAAGTGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCTGCCTGAAGGCCACTaGAATAGGCACAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRLPEGH*NRHSTW
Trigger: CCAGGTGCTGTGCCTATTCAAGTGGCCTTCAGGCAG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp TTTGTGGATAATTTGCTCCGAGGGTCACTAAGATACTaGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: FVDNLLRGSLRY*CTHQCWALWGS
Trigger: GGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGCAAATTATCCACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp CACCTACACACACGATCCTGTGGGAGACAAGATGCCTaGGGAGATCTCGAAGATCCAAACATCTACAGGCAG +
Preference number: 3 (lower is better)
Translates to: HLHTRSCGRQDA*GDLEDPNIYRQ
Trigger: CTGCCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp ACACCACCTACACACACGATCCTGTGGGAGACAAGATaGCTGGGGAGATCTCGAAGATCCAAACATCTACAG +
Preference number: 3 (lower is better)
Translates to: TPPTHTILWETR*LGRSRRSKHLQ
Trigger: CTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CCA 72 bp TGGGGCAATATAGTCCTCCCACCAGAAAAGAACTCGTaGAGTCCGCAGTACAATTGCAGGACTCCCGTCTTT +
Preference number: 3 (lower is better)
Translates to: WGNIVLPPEKNS*SPQYNCRTPVF
Trigger: AAAGACGGGAGTCCTGCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGGTGGGAGGACTATATTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCAGTGACTTATCAATTTaGACAACTAATGGCATGGGG +
Preference number: 3 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLSDLSI*TTNGMG
Trigger: CCCCATGCCATTAGTTGTCAAAATTGATAAGTCACT...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTTTAGGGATGTCGGGTaGGAATACAAGATGAGGCCA +
Preference number: 3 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRFRDVG*EYKMRP
Trigger: TGGCCTCATCTTGTATTCCAACCCGACATCCCTAAA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp GAGGTACTTTTAGGGATGTCGGGTTGGAATACAAGATaGGGCCAGATTTGCAAGGGTGATCTGAGGAGGGGA +
Preference number: 3 (lower is better)
Translates to: EVLLGMSGWNTR*GQICKGDLRRG
Trigger: TCCCCTCCTCAGATCACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACCCGACATCCCTAAAAGTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR GCA 72 bp CCACCAGAAAAGAACTCGTGGAGTCCGCAGTACAATTaGAGGACTCCCGTCTTTATACACAAGGGTCAGTCT +
Preference number: 3 (lower is better)
Translates to: PPEKNSWSPQYN*RTPVFIHKGQS
Trigger: AGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR-3UTR CAA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCTCCTTTGTGGATAATTaGCTCCGAGGGTCACTAAGA +
Preference number: 3 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTSFVDN*LRGSLR
Trigger: TCTTAGTGACCCTCGGAGCAAATTATCCACAAAGGA...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR TCA 72 bp CTGGACAAGGCCGAGAGCCAAGTGACTTATCAATTTTaGCAACTAATGGCATGGGGCAATATAGTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: LDKAESQVTYQF*QLMAWGNIVLP
Trigger: TGGGAGGACTATATTGCCCCATGCCATTAGTTGTCAAAATTGATAAGTCACTTGGCTCTCGGCCTTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAAGCGCGGGCAGCATGGTaGCAGCCAGGCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEARAAW*QPGWAA
Trigger: GGCTGCCCAGCCTGGCTGGCACCATGCTGCCCGCGC...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGCGCGGGCAGCATGGTaGCAGCCAGGCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLARAAW*QPGWAA
Trigger: GGCTGCCCAGCCTGGCTGGCACCATGCTGCCCGCGC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTACCTGGGGCCTGTGGTaGGGTGGCCGCGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSTWGLW*GGREQG
Trigger: CCCCTGCTCGCGGCCACCGCACCACAGGCCCCAGGT...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTGGTGCCAGCCAGGCTaGGCAGCCGGCAGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLWCQPG*AAGSER
Trigger: CCGCTCGCTGCCGGCTGCCCAGCCTGGCTGGCACCA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCGCAGGAGGGGAGCTaGAGCGCGAGCGTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSAQEGS*SASVCS
Trigger: AGAGCACACGCTCGCGCTCCAGCTCCCCTCCTGCGC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGGGCCTGTGGTGCGGTaGCCGCGAGCAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSGPVVR*PRAGDS
Trigger: GCTGTCCCCTGCTCGCGGCCACCGCACCACAGGCCC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTCAGGGGACACAGTCATaGACCGCGCAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSQGTQS*TAQEGS
Trigger: GCTCCCCTCCTGCGCGGTTCATGACTGTGTCCCCTG...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTTGGAGCGCGAGCGTGTaGTCTGCGCGCGGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCWSASV*SARGAS
Trigger: GCTAGCGCCGCGCGCAGAGCACACGCTCGCGCTCCA...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGGGGCCAGTGTCTCGTaGAAGGCCCACTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLGASVS*KAHSAP
Trigger: CGGAGCTGAGTGGGCCTTGCACGAGACACTGGCCCC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCAGCGCGCGGGCAGCATaGTGCCAGCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLSARAA*CQPGWA
Trigger: TGCCCAGCCTGGCTGGCACCATGCTGCCCGCGCGCT...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATGAAACCTGGGGCCTGTaGTGCGGTGGCCGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDETWGL*CGGREQ
Trigger: CTGCTCGCGGCCACCGCACCACAGGCCCCAGGTTTC...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAAGCATCACGTAGCGTGTaGAGGTCCCAGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEASRSV*RSQAAG
Trigger: GCCCGCTGCCTGGGACCTCCACACGCTACGTGATGC...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCTGCACCCACCAATGCTaGGCCCTTTGGGGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKACTHQC*ALWGSG
Trigger: TCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCA...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTGCTTGCTCCAGGGCTTaGGCCCGCTCCAGGCGACAC +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCACSRA*ARSRRH
Trigger: GTGTCGCCTGGAGCGGGCTCAAGCCCTGGAGCAAGC...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATGGTGCACCCACCAATaGTGGGCCCTTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEWCTHQ*WALWGS
Trigger: GGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCA...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCACCGCACCCCTCAGTaGAGGCTTTCTGTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAHRTPQ*RLSVLS
Trigger: GGACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACTGGGCAGAGGGAGCTaGGCCTCAGACCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQELGRGS*ASDQKA
Trigger: AGCCTTCTGGTCTGAGGCGCAGCTCCCTCTGCCCAG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGGCGCAGGAGGGGAGCTaGAGCGCGAGCGTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEAQEGS*SASVCS
Trigger: AGAGCACACGCTCGCGCTCCAGCTCCCCTCCTGCGC...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTGAAACCTGGGGCCTGTaGTGCGGTGGCCGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCETWGL*CGGREQ
Trigger: CTGCTCGCGGCCACCGCACCACAGGCCCCAGGTTTC...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATGCATCACGTAGCGTGTaGAGGTCCCAGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDASRSV*RSQAAG
Trigger: GCCCGCTGCCTGGGACCTCCACACGCTACGTGATGC...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTCCTCCAGGGTGTGGCTaGGGTCTGGCTCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLPPGCG*GLALRT
Trigger: GGTTCTCAGAGCCAGACCCCAGCCACACCCTGGAGG...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATGCACCCACCAATGCTaGGCCCTTTGGGGGTCCGGA +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQECTHQC*ALWGSG
Trigger: TCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCA...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCACCACAGCTGCTTATaGGAAGGGGCGCTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAHHSCL*EGALRA
Trigger: GGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTCAGGGGACACAGTCATaGACCGCGCAGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSQGTQS*TAQEGS
Trigger: GCTCCCCTCCTGCGCGGTTCATGACTGTGTCCCCTG...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTAGCTCCCTGTCCTTaGAGGGGTCATCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGVAPCP*RGHPPL
Trigger: CAGAGGCGGATGACCCCTTCAAGGACAGGGAGCTAC...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCTGGAGCAGTGGAGGTTaGACTGTGGGTCACGGTCAC +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAWSSGG*TVGHGH
Trigger: GTGACCGTGACCCACAGTGCAACCTCCACTGCTCCA...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATCCCTCACGGGGATTCTaGTGGGCCTCTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDPSRGF*WASSRA
Trigger: TGCCCTGGAAGAGGCCCAGCAGAATCCCCGTGAGGG...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGCACCGCACCCCTCAGTaGAGGCTTTCTGTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGHRTPQ*RLSVLS
Trigger: GGACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTG...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGCTGGGCAGAGGGAGCTaGGCCTCAGACCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEELGRGS*ASDQKA
Trigger: AGCCTTCTGGTCTGAGGCGCAGCTCCCTCTGCCCAG...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGGACAGTGCTTGTGGTaGCAACGCCTTCCAGACCCG +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSGQCLW*QRLPDP
Trigger: CGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTCGCCGTCTCCATGTGTaGATGCTTCCTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSRRLHV*MLPPGL
Trigger: CAGGCCTGGAGGAAGCATGCACACATGGAGACGGCG...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGGGCCTGTGGTGCGGTaGCCGCGAGCAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSGPVVR*PRAGDS
Trigger: GCTGTCCCCTGCTCGCGGCCACCGCACCACAGGCCC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTCCATCGAACACCGGCTaGGTCTCCATCGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSPSNTG*VSIVGV
Trigger: GACACCCACGATGGAGACCCAGCCGGTGTTCGATGG...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGTCCATCCTGCCTCCCTaGACTCTCCACCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGSILPP*TLHLPL
Trigger: CAAGGGCAGGTGGAGAGTCCAGGGAGGCAGGATGGA...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCGATGTGGCAGGGCCATaGGCAACGCTGAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKADVAGP*ATLKVR
Trigger: CCTAACCTTCAGCGTTGCCCATGGCCCTGCCACATC...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACCCACCTTTCCACGTTaGGGCAGGGCCACCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEPTFPR*GRATSH
Trigger: ATGACTGGTGGCCCTGCCCCAACGTGGAAAGGTGGG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGGCTTCCCATCCGGGGTaGCACACCAGCAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEASHPG*HTSSTQ
Trigger: CTGGGTACTGCTGGTGTGTCACCCCGGATGGGAAGC...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCGAACCATGTCAGTGGTaGGAGCATCCAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAEPCQW*EHPVGW
Trigger: CCAGCCTACTGGATGCTCTCACCACTGACATGGTTC...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCTGGGGTCTGGCTCTaGGAACCTCCCACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSAGVWL*EPPTSS
Trigger: ACTGGAGGTGGGAGGTTCTCAGAGCCAGACCCCAGC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTATCTGCCCCTGGCACTaGGACAGCTGCGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSICPWH*DSCVSG
Trigger: CCCAGAGACGCAGCTGTCTCAGTGCCAGGGGCAGAT...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTGGAGCGCGAGCGTGTaGTCTGCGCGCGGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSWSASV*SARGAS
Trigger: GCTAGCGCCGCGCGCAGAGCACACGCTCGCGCTCCA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTTGGAGCAGTGGAGGTTaGACTGTGGGTCACGGTCAC +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSWSSGG*TVGHGH
Trigger: GTGACCGTGACCCACAGTGCAACCTCCACTGCTCCA...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGTTGCATCTACCTCGATaGACCACGCCCAGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEELHLPR*TTPRVG
Trigger: CCCGACCCTGGGCGTGGTGCATCGAGGTAGATGCAA...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCTGGTGCACCCACCAATaGTGGGCCCTTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLWCTHQ*WALWGS
Trigger: GGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCA...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTCTGGGTTATCACCCCTaGCCTTCTAGGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSLGYHP*PSRGGR
Trigger: TCTGCCTCCCCTAGAAGGGCAGGGGTGATAACCCAG...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTCGGCACTTGGCTCGCTaGTACTCACACATGGACTCG +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLRHLAR*YSHMDS
Trigger: CGAGTCCATGTGTGAGTACCAGCGAGCCAAGTGCCG...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCTCCAGGGTGTGGCTaGGGTCTGGCTCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLPPGCG*GLALRT
Trigger: GGTTCTCAGAGCCAGACCCCAGCCACACCCTGGAGG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGATGTTACACGGGATGTaGCAGGGCCATGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGMLHGM*QGHGQR
Trigger: GCGTTGCCCATGGCCCTGCCACATCCCGTGTAACAT...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATTAGCCCAACCTCCCTaGACAAGGCCGAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQELAQPP*TRPRAK
Trigger: CTTGGCTCTCGGCCTTGTCCAGGGAGGTTGGGCTAA...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGAAGAGTTTCCCTGTTaGCACCGCACCCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGEEFPC*HRTPQC
Trigger: GCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTC...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCACACACACGATCCTGTaGGAGACAAGATGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKATHTIL*ETRCLG
Trigger: CCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGT...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 72 bp ACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTaGGGGGTCCGGAGAGCAGGAATGCACGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: TKILVHPPMLGP*GVRRAGMHGPS
Trigger: AGAGGGTCCGTGCATTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 72 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTaGCAGGGAGGTGAAGAGTTTCCCTGTTGGCACCGC +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVG*QGGEEFPCWHR
Trigger: GCGGTGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGGGCACATTCAGGGATaGCAATACCCTCACGGGGAT +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLGHIQG*QYPHGD
Trigger: ATCCCCGTGAGGGTATTGTCATCCCTGAATGTGCCC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCGTAGCTCCCTGTCCTTaGAGGGGTCATCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLVAPCP*RGHPPL
Trigger: CAGAGGCGGATGACCCCTTCAAGGACAGGGAGCTAC...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGTGCTGTCCAGCTGGCTaGAATACCAGTGCACTACCC +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGCCPAG*NTSALP
Trigger: GGGTAGTGCACTGGTATTTCAGCCAGCTGGACAGCA...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCGCGGAAGATGCCTGTaGTGCCTGTGGAAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLRGRCL*CLWKAG
Trigger: CCCAGCTTTCCACAGGCATCACAGGCATCTTCCGCG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTGCCTGAAGGCCACTTaGATAGGCACAGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDCLKAT*IGTAPG
Trigger: CCCAGGTGCTGTGCCTATTCAAGTGGCCTTCAGGCA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACCAGATTTGCAAGGGTaGTCTGAGGAGGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEPDLQG*SEEGTS
Trigger: ACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGTGCTTCCTCCAGGCCTaGAAGTGGGGCCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGECFLQA*KWGQCL
Trigger: GAGACACTGGCCCCACTTTCAGGCCTGGAGGAAGCA...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATCTTCCAGGGCACTCTaGCTCTCCTGGTCACACGAA +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQESSRAL*LSWSHE
Trigger: TTCGTGTGACCAGGAGAGGCAGAGTGCCCTGGAAGA...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATCCTGGACTCTCCACCTaGCCTTGGGTTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDPGLST*PWVFCS
Trigger: GGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGG...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGCCCAACCTCCCTCACTaGCACCACAGCTGCTTATGG +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEPNLPH*HHSCLW
Trigger: CCATAAGCAGCTGTGGTGGCAGTGAGGGAGGTTGGG...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATCTCCCACAGGGACAGTaGTTGTGGTGCCAACGCCTT +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDLPQGQ*LWCQRL
Trigger: AAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAG...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCGCCGTCTCCATGTGTaGATGCTTCCTCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGERRLHV*MLPPGL
Trigger: CAGGCCTGGAGGAAGCATGCACACATGGAGACGGCG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCTGTGGGAGACAAGATaGCTGGGGAGATCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKALWETR*LGRSRR
Trigger: TCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGCACTTATTAGAAACCTaGGGCCTGTGGTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGHLLET*GLWCGG
Trigger: GCCACCGCACCACAGGCCCCAGGTTTCTAATAAGTG...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACACTTATTAGAAACCTaGGGCCTGTGGTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEHLLET*GLWCGG
Trigger: GCCACCGCACCACAGGCCCCAGGTTTCTAATAAGTG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTACCAGCAGTAGCCAGTaGACTGGTGGCATTGCACTG +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSTSSSQ*TGGIAL
Trigger: CAGTGCAATGCCACCAGTCCACTGGCTACTGCTGGT...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGATGTTACACGGGATGTaGCAGGGCCATGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEMLHGM*QGHGQR
Trigger: GCGTTGCCCATGGCCCTGCCACATCCCGTGTAACAT...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGAGCCGGTACCTGTGTaGGCTATTCATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGEPVPV*AIHGIW
Trigger: CCAGATCCCATGAATAGCCCACACAGGTACCGGCTC...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATGAAGAGTTTCCCTGTTaGCACCGCACCCCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDEEFPC*HRTPQC
Trigger: GCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTC...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCAGGAGATGGAGGAGTaGAGAGGTCACACCCAATCT +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAQEMEE*RGHTQS
Trigger: AGATTGGGTGTGACCTCTCCACTCCTCCATCTCCTG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCACCACAGCTGCTTATaGGAAGGGGCGCTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEHHSCL*EGALRA
Trigger: GGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGCAGGGACAGTGCTTGTaGTGCCAACGCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEQGQCL*CQRLPD
Trigger: GTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTG...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTCAGATGGGTTTGGGTTaGGTCCTGGAGCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSQMGLG*VLEQWR
Trigger: CCTCCACTGCTCCAGGACTCAACCCAAACCCATCTG...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTACAAACACAGCTTCCTaGGGCTTCTTGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLTNTAS*GFLACS
Trigger: GGAGCAAGCCAAGAAGCCTCAGGAAGCTGTGTTTGT...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGGAACCATGTCAGTGGTaGGAGCATCCAGTAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEEPCQW*EHPVGW
Trigger: CCAGCCTACTGGATGCTCTCACCACTGACATGGTTC...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTAGGTTAGGTGTCTGGTaGTCCATCCTGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSRLGVW*SILPPW
Trigger: CCAGGGAGGCAGGATGGATCACCAGACACCTAACCT...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTTACCAACAAGGTGACTaGCACCTCCCCCAACCCACC +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCYQQGD*HLPQPT
Trigger: GGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTA...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTTTTGCAAGGGTGATCTaGGGAGGGGACCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSFARVI*GGDQSR
Trigger: CCTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAA...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTCAGCTCCGGCACGTTaGGTTCTCTCATTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDSAPAR*VLSLGL
Trigger: TAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGTGCCCTTGGGTTTTCTaGTCCTTAGACGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEECPWVF*SLDEAS
Trigger: GGACGCCTCGTCTAAGGAGCAGAAAACCCAAGGGCA...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCTGGGTTATCACCCCTaGCCTTCTAGGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLLGYHP*PSRGGR
Trigger: TCTGCCTCCCCTAGAAGGGCAGGGGTGATAACCCAG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCTCCCACAGGGACAGTaGTTGTGGTGCCAACGCCTT +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCLPQGQ*LWCQRL
Trigger: AAGGCGTTGGCACCACAAGCACTGTCCCTGTGGGAG...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGTCCCGAGAAGGTTGTaGTCCTCCCACAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSVPRRL*SSHRDS
Trigger: ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGAC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTAGGCACAGATGGGTTTaGGTTGAGTCCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLRHRWV*VESWSS
Trigger: ACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCT...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACATCAGAGGCACAGATaGGTTTGGGTTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEHQRHR*VWVESW
Trigger: CCAGGACTCAACCCAAACCCATCTGTGCCTCTGATG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCGGCACTTGGCTCGCTaGTACTCACACATGGACTCG +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGERHLAR*YSHMDS
Trigger: CGAGTCCATGTGTGAGTACCAGCGAGCCAAGTGCCG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGTCGGGTCTCGGCACTTaGCTCGCTGGTACTCACACA +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGESGLGT*LAGTHT
Trigger: TGTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGA...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGGTATGGCACTGCACCTaGGTAAAGGAGCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEVWHCT*VKEPSS
Trigger: CGAGGATGGCTCCTTTACCCAGGTGCAGTGCCATAC...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTCGTCGCTCTCACAACTaGGCATCACGTAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSRRSHN*ASRSVW
Trigger: CCACACGCTACGTGATGCCCAGTTGTGAGAGCGACG...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCTGTGTGGGCTATTCATaGGATCTGGACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKACVGYS*DLDSLP
Trigger: AGGAAGGGAGTCCAGATCCCATGAATAGCCCACACA...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACAGGAGATGGAGGAGTaGAGAGGTCACACCCAATCT +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEQEMEE*RGHTQS
Trigger: AGATTGGGTGTGACCTCTCCACTCCTCCATCTCCTG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGGATTTCCCTGTAGCTaGGTTATCACCCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSGFPCS*VITPAL
Trigger: AAGGGCAGGGGTGATAACCCAGCTACAGGGAAATCC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCTCAGACCAGAAGGCTaGGCAGCCCACCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCLRPEG*AAHPRI
Trigger: GATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGAG...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCTCAGACCAGAAGGCTaGGCAGCCCACCCTAGAATC +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGELRPEG*AAHPRI
Trigger: GATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGAG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCAGGGACAGTGCTTGTaGTGCCAACGCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEQGQCL*CQRLPD
Trigger: GTCTGGAAGGCGTTGGCACCACAAGCACTGTCCCTG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATACACACACGATCCTGTaGGAGACAAGATGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDTHTIL*ETRCLG
Trigger: CCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGCTTCCCATCCGGGGTaGCACACCAGCAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSASHPG*HTSSTQ
Trigger: CTGGGTACTGCTGGTGTGTCACCCCGGATGGGAAGC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATGTCATCTTTCCTTCCTaGGTTACCCTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDVIFPS*VTLAQG
Trigger: CCCTTGAGCCAGGGTAACTCAGGAAGGAAAGATGAC...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCTGAGTTAATGGCCTaGACCATGTCAGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSAELMA*TMSVVR
Trigger: TCTCACCACTGACATGGTTCAGGCCATTAACTCAGC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTTCCAGTGGGCGCTGCTaGGTTAATGGCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSSSGRC*VNGLNH
Trigger: ATGGTTCAGGCCATTAACTCAGCAGCGCCCACTGGA...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCTCTTCACGTAGCGCTTaGAGGGCTTCATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLSSRSA*RASSPA
Trigger: AGCGGGAGATGAAGCCCTTCAAGCGCTACGTGAAGA...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTTCTTCACGTAGCGCTTaGAGGGCTTCATCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSSSRSA*RASSPA
Trigger: AGCGGGAGATGAAGCCCTTCAAGCGCTACGTGAAGA...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATAGGTTTGCAGGGAGGTaGAGAGTTTCCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDRFAGR*RVSLLA
Trigger: TGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCATCTGCCCCTGGCACTaGGACAGCTGCGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSICPWH*DSCVSG
Trigger: CCCAGAGACGCAGCTGTCTCAGTGCCAGGGGCAGAT...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAATCTGGCCAGCATCTTTaGATCTACCTCGATGCACCA +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQESGQHL*IYLDAP
Trigger: TGGTGCATCGAGGTAGATGCAAAGATGCTGGCCAGA...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCCCTCACGGGGATTCTaGTGGGCCTCTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRPSRGF*WASSRA
Trigger: TGCCCTGGAAGAGGCCCAGCAGAATCCCCGTGAGGG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGTGCCCTTGGGTTTTCTaGTCCTTAGACGAGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGECPWVF*SLDEAS
Trigger: GGACGCCTCGTCTAAGGAGCAGAAAACCCAAGGGCA...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTTGGTGCCAGCCAGGCTaGGCAGCCGGCAGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSWCQPG*AAGSER
Trigger: CCGCTCGCTGCCGGCTGCCCAGCCTGGCTGGCACCA...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCTTCCTGAGTTACCCTaGCTCAAGGGCTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGELPELP*LKGLSV
Trigger: CACCGACAAGCCCTTGAGCCAGGGTAACTCAGGAAG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCTTCCTGAGTTACCCTaGCTCAAGGGCTTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLLPELP*LKGLSV
Trigger: CACCGACAAGCCCTTGAGCCAGGGTAACTCAGGAAG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCTGGTGGCATTGCACTaGCTTATAGAGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCLVALH*LIESPR
Trigger: CCTGGGGGACTCTATAAGCCAGTGCAATGCCACCAG...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTGTGTGGGCTATTCATaGGATCTGGACTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLCVGYS*DLDSLP
Trigger: AGGAAGGGAGTCCAGATCCCATGAATAGCCCACACA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 72 bp CAGTGTCTCGTGCAAGGCCCACTCAGCTCCGGCACGTaGAGTTCTCTCATTGGGGCTAATGGGAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QCLVQGPLSSGT*SSLIGANGRRL
Trigger: AAGCCTTCTCCCATTAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGAGTGGGCCTTGCACGAGACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTACAAACACAGCTTCCTaGGGCTTCTTGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSTNTAS*GFLACS
Trigger: GGAGCAAGCCAAGAAGCCTCAGGAAGCTGTGTTTGT...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGGTCATCTTTCCTTCCTaGGTTACCCTGGCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEVIFPS*VTLAQG
Trigger: CCCTTGAGCCAGGGTAACTCAGGAAGGAAAGATGAC...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGGCTGGGGTCTGGCTCTaGGAACCTCCCACCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWAGVWL*EPPTSS
Trigger: ACTGGAGGTGGGAGGTTCTCAGAGCCAGACCCCAGC...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAAGCTCAGGCAGTGAAATaGCCTTGTCTTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEAQAVK*PCLCSG
Trigger: ACCTGAACAAAGACAAGGTCATTTCACTGCCTGAGC...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCAATGCACGGACCCTCTaGGAGCCGGTACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTNARTL*EPVPVW
Trigger: CCACACAGGTACCGGCTCTCAGAGGGTCCGTGCATT...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTAGGTTTGCAGGGAGGTaGAGAGTTTCCCTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCRFAGR*RVSLLA
Trigger: TGCCAACAGGGAAACTCTTCACCTCCCTGCAAACCT...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGCCCATAAGAAAACTTaGGGGAACAGGAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLAHKKT*GNRKNL
Trigger: GAGGTTCTTCCTGTTCCCTCAAGTTTTCTTATGGGC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGGTTGGAATACAAGATaGGGCCAGATTTGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSGWNTR*GQICKG
Trigger: ACCCTTGCAAATCTGGCCTCATCTTGTATTCCAACC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTTCACTAAGATACTGGTaGACCCACCAATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSSLRYW*THQCWA
Trigger: GGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGA...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCGGACAGTGCTTGTGGTaGCAACGCCTTCCAGACCCG +
Preference number: 4 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTGQCLW*QRLPDP
Trigger: CGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCTGTGGGAGACAAGATaGCTGGGGAGATCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCLWETR*LGRSRR
Trigger: TCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAG...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGATCCTCGCCACACTCTaGGACAAACACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEILATL*DKHSFL
Trigger: CAGGAAGCTGTGTTTGTCCCAGAGTGTGGCGAGGAT...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCTCTCCACCTGCCCTTaGGTTTTCTGCTCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLLSTCP*VFCSLD
Trigger: GTCTAAGGAGCAGAAAACCCAAGGGCAGGTGGAGAG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTGCTATTCATGGGATCTaGACTCCCTTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCAIHGI*TPFLSQ
Trigger: CTGGGAGAGGAAGGGAGTCCAGATCCCATGAATAGC...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCGCTATTCATGGGATCTaGACTCCCTTCCTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLAIHGI*TPFLSQ
Trigger: CTGGGAGAGGAAGGGAGTCCAGATCCCATGAATAGC...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCCCACCTTTCCACGTTaGGGCAGGGCCACCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRPTFPR*GRATSH
Trigger: ATGACTGGTGGCCCTGCCCCAACGTGGAAAGGTGGG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCAGATGGGTTTGGGTTaGGTCCTGGAGCAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRQMGLG*VLEQWR
Trigger: CCTCCACTGCTCCAGGACTCAACCCAAACCCATCTG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTATAGAGTTGGGGCTGTaGTTTCATCTCCATCGAACA +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSIELGL*FHLHRT
Trigger: TGTTCGATGGAGATGAAATCACAGCCCCAACTCTAT...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGGCTGAGTTAATGGCCTaGACCATGTCAGTGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEAELMA*TMSVVR
Trigger: TCTCACCACTGACATGGTTCAGGCCATTAACTCAGC...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGGCTCAGGCAGTGAAATaGCCTTGTCTTTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEAQAVK*PCLCSG
Trigger: ACCTGAACAAAGACAAGGTCATTTCACTGCCTGAGC...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCGTGACTTATCAATTTTaGCAACTAATGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAVTYQF*QLMAWG
Trigger: GCCCCATGCCATTAGTTGTCAAAATTGATAAGTCAC...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTAGGCCGAGAGCCAAGTaGCTTATCAATTTTGACAAC +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLRPRAK*LINFDN
Trigger: GTTGTCAAAATTGATAAGTCACTTGGCTCTCGGCCT...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGAATGCACGGACCCTCTaGGAGCCGGTACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWNARTL*EPVPVW
Trigger: CCACACAGGTACCGGCTCTCAGAGGGTCCGTGCATT...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTACCAACAAGGTGACTaGCACCTCCCCCAACCCACC +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSYQQGD*HLPQPT
Trigger: GGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTTCTGGCCAGCATCTTTaGATCTACCTCGATGCACCA +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSSGQHL*IYLDAP
Trigger: TGGTGCATCGAGGTAGATGCAAAGATGCTGGCCAGA...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCCTGGACTCTCCACCTaGCCTTGGGTTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRPGLST*PWVFCS
Trigger: GGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCACTGCCACCACAGCTaGTTATGGGAAGGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRHCHHS*LWEGAL
Trigger: TAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGTCCCGAGAAGGTTGTaGTCCTCCCACAGGGACAGT +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRVPRRL*SSHRDS
Trigger: ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGAC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCTCGGGTCTCGGCACTTaGCTCGCTGGTACTCACACA +
Preference number: 4 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTSGLGT*LAGTHT
Trigger: TGTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGA...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGAGGCGACACTTGCTCTaGCCAGCATCTTTGCATCTA +
Preference number: 4 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGERRHLL*PASLHL
Trigger: TAGATGCAAAGATGCTGGCCAGAGCAAGTGTCGCCT...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCGTCGCTCTCACAACTaGGCATCACGTAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRRRSHN*ASRSVW
Trigger: CCACACGCTACGTGATGCCCAGTTGTGAGAGCGACG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGTCCATCCTGCCTCCCTaGACTCTCCACCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWSILPP*TLHLPL
Trigger: CAAGGGCAGGTGGAGAGTCCAGGGAGGCAGGATGGA...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCAAAGTGCAAACATGGTaGGCACCACTTATGTTACAC +
Preference number: 4 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKAKVQTW*APLMLH
Trigger: GTGTAACATAAGTGGTGCCCACCATGTTTGCACTTT...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGCCAGAAAAGAACTCGTaGAGTCCGCAGTACAATTGC +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEPEKNS*SPQYNC
Trigger: GCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGG...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTTAGCCCAACCTCCCTaGACAAGGCCGAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSLAQPP*TRPRAK
Trigger: CTTGGCTCTCGGCCTTGTCCAGGGAGGTTGGGCTAA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGATAGAGTTGGGGCTGTaGTTTCATCTCCATCGAACA +
Preference number: 4 (lower is better)
Translates to: ETAASLGASLVGLQGGEEIELGL*FHLHRT
Trigger: TGTTCGATGGAGATGAAATCACAGCCCCAACTCTAT...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGGGCACATTCAGGGATaGCAATACCCTCACGGGGAT +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRGHIQG*QYPHGD
Trigger: ATCCCCGTGAGGGTATTGTCATCCCTGAATGTGCCC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTCCAGTGGGCGCTGCTaGGTTAATGGCCTGAACCAT +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSSSGRC*VNGLNH
Trigger: ATGGTTCAGGCCATTAACTCAGCAGCGCCCACTGGA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTGCTGTCCAGCTGGCTaGAATACCAGTGCACTACCC +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRCCPAG*NTSALP
Trigger: GGGTAGTGCACTGGTATTTCAGCCAGCTGGACAGCA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAAGTGACTTATCAATTTTaGCAACTAATGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: RYWCTHQCWALWGSGEQEVTYQF*QLMAWG
Trigger: GCCCCATGCCATTAGTTGTCAAAATTGATAAGTCAC...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGTGTTACCAACAAGGTaGCTGACACCTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSVLPTR*LTPPPT
Trigger: GGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACAC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGTGTTACCAACAAGGTaGCTGACACCTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRVLPTR*LTPPPT
Trigger: GGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACAC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGTGCCTGAAGGCCACTTaGATAGGCACAGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWCLKAT*IGTAPG
Trigger: CCCAGGTGCTGTGCCTATTCAAGTGGCCTTCAGGCA...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTCAGCTCCGGCACGTTaGGTTCTCTCATTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSSAPAR*VLSLGL
Trigger: TAGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTGGACTCGTAGGACCTaGCATCAGAGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSWTRRT*HQRHRW
Trigger: CCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCTTGCCTCCCCTCTCATaGGTTATACAGAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLLPPLS*VIQSRC
Trigger: GCATCTACTCTGTATAACGCATGAGAGGGGAGGCAA...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGCACTGCCACCACAGCTaGTTATGGGAAGGGGCGCTA +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWHCHHS*LWEGAL
Trigger: TAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTGGGGCCAGTGTCTCGTaGAAGGCCCACTCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSGASVS*KAHSAP
Trigger: CGGAGCTGAGTGGGCCTTGCACGAGACACTGGCCCC...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGTATGGCACTGCACCTaGGTAAAGGAGCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRVWHCT*VKEPSS
Trigger: CGAGGATGGCTCCTTTACCCAGGTGCAGTGCCATAC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCCTGGTGGCATTGCACTaGCTTATAGAGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSLVALH*LIESPR
Trigger: CCTGGGGGACTCTATAAGCCAGTGCAATGCCACCAG...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTAAAGTGCAAACATGGTaGGCACCACTTATGTTACAC +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLKVQTW*APLMLH
Trigger: GTGTAACATAAGTGGTGCCCACCATGTTTGCACTTT...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATCCCAGGATAGAGTCCTaGATTTTAGAAAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SDQKAGQPTLESAEDACDPRIES*ILESWT
Trigger: AGTCCAGCTTTCTAAAATCCAGGACTCTATCCTGGG...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCTTCAGCTCAGGCAGTaGAATGACCTTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCLQLRQ*NDLVFV
Trigger: AACAAAGACAAGGTCATTTCACTGCCTGAGCTGAAG...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGTCTTCCAGGGCACTCTaGCTCTCCTGGTCACACGAA +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWSSRAL*LSWSHE
Trigger: TTCGTGTGACCAGGAGAGGCAGAGTGCCCTGGAAGA...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTAGTCCGCAGTACAATTaGAGGACTCCCGTCTTTATA +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSSPQYN*RTPVFI
Trigger: TATAAAGACGGGAGTCCTGCAATTGTACTGCGGACT...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTCCTGTCCCCTCCCCTaGTTAGATATTAAATATCTA +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLSCPLP*LDIKYL
Trigger: TAGATATTTAATATCTAAGCAGGGGAGGGGACAGGA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGTTTGGGTTGAGTCCTaGAGCAGTGGAGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSVWVES*SSGGCT
Trigger: AGTGCAACCTCCACTGCTCCAGGACTCAACCCAAAC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGAGGCACAGATGGGTTTaGGTTGAGTCCTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRRHRWV*VESWSS
Trigger: ACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCT...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGGCTGGTACTCACACATaGACTCGTAGGACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRAGTHT*TRRTCH
Trigger: ATGGCAGGTCCTACGAGTCCATGTGTGAGTACCAGC...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGACCAGCAGTAGCCAGTaGACTGGTGGCATTGCACTG +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWTSSSQ*TGGIAL
Trigger: CAGTGCAATGCCACCAGTCCACTGGCTACTGCTGGT...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGGGTCACTAAGATACTaGTGCACCCACCAATGCTGG +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSGSLRY*CTHQCW
Trigger: CCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCTCAAGGGCTTGTCGGTaGCTGAACCTGAACATACAG +
Preference number: 4 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTSRACR*LNLNIQ
Trigger: CTGTATGTTCAGGTTCAGTCACCGACAAGCCCTTGA...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTCAAGGGCTTGTCGGTaGCTGAACCTGAACATACAG +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRSRACR*LNLNIQ
Trigger: CTGTATGTTCAGGTTCAGTCACCGACAAGCCCTTGA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTTGCTTCCTCCAGGCCTaGAAGTGGGGCCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSCFLQA*KWGQCL
Trigger: GAGACACTGGCCCCACTTTCAGGCCTGGAGGAAGCA...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTTTGCATCTACCTCGATaGACCACGCCCAGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSLHLPR*TTPRVG
Trigger: CCCGACCCTGGGCGTGGTGCATCGAGGTAGATGCAA...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGCATCAGAGGCACAGATaGGTTTGGGTTGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWHQRHR*VWVESW
Trigger: CCAGGACTCAACCCAAACCCATCTGTGCCTCTGATG...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGGCTGGTACTCACACATaGACTCGTAGGACCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWAGTHT*TRRTCH
Trigger: ATGGCAGGTCCTACGAGTCCATGTGTGAGTACCAGC...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAGGCGACACTTGCTCTaGCCAGCATCTTTGCATCTA +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSRRHLL*PASLHL
Trigger: TAGATGCAAAGATGCTGGCCAGAGCAAGTGTCGCCT...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGATCCTCGCCACACTCTaGGACAAACACAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWILATL*DKHSFL
Trigger: CAGGAAGCTGTGTTTGTCCCAGAGTGTGGCGAGGAT...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTCCATCGAACACCGGCTaGGTCTCCATCGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSPSNTG*VSIVGV
Trigger: GACACCCACGATGGAGACCCAGCCGGTGTTCGATGG...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTTAAAAGTGCAAACATaGTGGGCACCACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLLKVQT*WAPLML
Trigger: TAACATAAGTGGTGCCCACCATGTTTGCACTTTTAA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTCAATGCTGGGCCCTTTaGGGGTCCGGAGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSQCWAL*GSGEQE
Trigger: TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTG...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
3UTR CAA 72 bp CCCACCAGAAAAGAACTCGTGGAGTCCGCAGTACAATaGCAGGACTCCCGTCTTTATACACAAGGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PTRKELVESAVQ*QDSRLYTQGSV
Trigger: GACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTTTTGCAAGGGTGATCTaGGGAGGGGACCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSFARVI*GGDQSR
Trigger: CCTGGACTGGTCCCCTCCTCAGATCACCCTTGCAAA...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTAAACAGCAATGCCAATaGCTGTACAAAAGAACTATA +
Preference number: 4 (lower is better)
Translates to: HCHHSCLWEGALRATCCSKQQCQ*LYKRTI
Trigger: TATAGTTCTTTTGTACAGGCATTGGCATTGCTGTTT...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGAAACAGCAATGCCAATaGCTGTACAAAAGAACTATA +
Preference number: 4 (lower is better)
Translates to: APRVTKILVHPPMLGPLGKQQCQ*LYKRTI
Trigger: TATAGTTCTTTTGTACAGGCATTGGCATTGCTGTTT...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTTGCCTCCCCTCTCATaGGTTATACAGAGTAGATGC +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSLPPLS*VIQSRC
Trigger: GCATCTACTCTGTATAACGCATGAGAGGGGAGGCAA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTGATGTGGCAGGGCCATaGGCAACGCTGAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSDVAGP*ATLKVR
Trigger: CCTAACCTTCAGCGTTGCCCATGGCCCTGCCACATC...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTAATGCAAATCCTTTGTaGATAATTTGCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSNANPL*IICSEG
Trigger: ACCCTCGGAGCAAATTATCCACAAAGGATTTGCATT...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCTTCAGCTCAGGCAGTaGAATGACCTTGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRLQLRQ*NDLVFV
Trigger: AACAAAGACAAGGTCATTTCACTGCCTGAGCTGAAG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGGCCCATAAGAAAACTTaGGGGAACAGGAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWAHKKT*GNRKNL
Trigger: GAGGTTCTTCCTGTTCCCTCAAGTTTTCTTATGGGC...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR TCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTCCAGATTTGCAAGGGTaGTCTGAGGAGGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSPDLQG*SEEGTS
Trigger: ACTGGTCCCCTCCTCAGATCACCCTTGCAAATCTGG...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTTGGACTCGTAGGACCTaGCATCAGAGGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSWTRRT*HQRHRW
Trigger: CCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCA...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCCCCAGGATAGAGTCCTaGATTTTAGAAAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSPRIES*ILESWT
Trigger: AGTCCAGCTTTCTAAAATCCAGGACTCTATCCTGGG...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTTCACTAAGATACTGGTaGACCCACCAATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSSLRYW*THQCWA
Trigger: GGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGA...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTGGATTTCCCTGTAGCTaGGTTATCACCCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSGFPCS*VITPAL
Trigger: AAGGGCAGGGGTGATAACCCAGCTACAGGGAAATCC...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGTCCTGTCCCCTCCCCTaGTTAGATATTAAATATCTA +
Preference number: 4 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWSCPLP*LDIKYL
Trigger: TAGATATTTAATATCTAAGCAGGGGAGGGGACAGGA...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTTAAAAGTGCAAACATaGTGGGCACCACTTATGTTA +
Preference number: 4 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRLKVQT*WAPLML
Trigger: TAACATAAGTGGTGCCCACCATGTTTGCACTTTTAA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTCCAGAAAAGAACTCGTaGAGTCCGCAGTACAATTGC +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSPEKNS*SPQYNC
Trigger: GCAATTGTACTGCGGACTCCACGAGTTCTTTTCTGG...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR GCA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTAGTCCGCAGTACAATTaGAGGACTCCCGTCTTTATA +
Preference number: 4 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSSPQYN*RTPVFI
Trigger: TATAAAGACGGGAGTCCTGCAATTGTACTGCGGACT...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGCCAATGCTGGGCCCTTaGGGGGTCCGGAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: APRVTKILVHPPMLGPLGPMLGP*GVRRAG
Trigger: TCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGG...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGGCGCTAAGGGCCACTaGCTGCTCTGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLGAKGH*LLCLKA
Trigger: GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTCTGAGGCTTCTTGGCTaGCTCCAGGGCTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLLRLLG*LQGLSP
Trigger: CGGGCTCAAGCCCTGGAGCAAGCCAAGAAGCCTCAG...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTTCCCACCTTTCCACGTaGGGGCAGGGCCACCAGTCA +
Preference number: 5 (lower is better)
Translates to: HCHHSCLWEGALRATCCSSHLST*GQGHQS
Trigger: TGACTGGTGGCCCTGCCCCAACGTGGAAAGGTGGGA...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTTCCCACCTTTCCACGTaGGGGCAGGGCCACCAGTCA +
Preference number: 5 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLSHLST*GQGHQS
Trigger: TGACTGGTGGCCCTGCCCCAACGTGGAAAGGTGGGA...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS CCA 90 bp TGCATCTACCTCGATGCACCACGCCCAGGGTCGGGTCTCGGCACTTaGCTCGCTGGTACTCACACATGGACTCGTAGGACCTGCCATCAG +
Preference number: 5 (lower is better)
Translates to: CIYLDAPRPGSGLGT*LAGTHTWTRRTCHQ
Trigger: CTGATGGCAGGTCCTACGAGTCCATGTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGACCCTGGGCGTGGTGCATCGAGGTAGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS-3UTR CAA 90 bp AGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGGTCCGGAGAGCAGGAACGCTCCAGGCGACACTaGCTCTGGCCAGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: RYWCTHQCWALWGSGEQERSRRH*LWPASL
Trigger: CAAAGATGCTGGCCAGAGCAAGTGTCGCCTGGAGCG...TTCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTCCGCCTCTGTAGTCTaGGCCCTGGCGTCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDSASVV*ALASLS
Trigger: TGAGAGCGACGCCAGGGCCAAGACTACAGAGGCGGA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGGCGCTAAGGGCCACTaGCTGCTCTGCCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSGAKGH*LLCLKA
Trigger: GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGGTCGGGTCTCGGCACTaGGCTCGCTGGTACTCACAC +
Preference number: 5 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEVGSRH*ARWYSH
Trigger: GTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGAC...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATCGCTCCAGGCGACACTaGCTCTGGCCAGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDRSRRH*LWPASL
Trigger: CAAAGATGCTGGCCAGAGCAAGTGTCGCCTGGAGCG...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCTGAGGCTTCTTGGCTaGCTCCAGGGCTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGELRLLG*LQGLSP
Trigger: CGGGCTCAAGCCCTGGAGCAAGCCAAGAAGCCTCAG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTCCCTGGCTCAAGGGCTaGTCGGTGACTGAACCTGAA +
Preference number: 5 (lower is better)
Translates to: HCHHSCLWEGALRATCCSPWLKG*SVTEPE
Trigger: TTCAGGTTCAGTCACCGACAAGCCCTTGAGCCAGGG...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCTCCGCCTCTGTAGTCTaGGCCCTGGCGTCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLSASVV*ALASLS
Trigger: TGAGAGCGACGCCAGGGCCAAGACTACAGAGGCGGA...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGCCTGAAGGCCCGCCGGGCACATTTCTaGGGCTTGGCTTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QLLMGRGAKGHLLLCLKARRAHF*GLAFFF
Trigger: GAAGAAGAAAGCCAAGCCCAAGAAATGTGCCCGGCG...GGCCTTCAGGCAGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTCCTGTCCCGAGAAGGTaGTGCTCCTCCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCPVPRR*CSSHRD
Trigger: GTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGG...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTCTCAGCTCCGGCACGTaGAGTTCTCTCATTGGGGCT +
Preference number: 5 (lower is better)
Translates to: HCHHSCLWEGALRATCCSLSSGT*SSLIGA
Trigger: AGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGAG...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATACGAGGCGTCCTTCTTaGCTAACACCCAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDTRRPS*LTPRQP
Trigger: GGGCTGCCTGGGTGTTAGCAAAGAAGGACGCCTCGT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381280.4
CDS-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTCTCTGGCCAGCATCTTaGCATCTACCTCGATGCACC +
Preference number: 5 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLLWPAS*HLPRCT
Trigger: GGTGCATCGAGGTAGATGCAAAGATGCTGGCCAGAG...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCGGCTTGCTCCAGGGCTaGAGCCCGCTCCAGGCGACA +
Preference number: 5 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSGLLQG*SPLQAT
Trigger: TGTCGCCTGGAGCGGGCTCAAGCCCTGGAGCAAGCC...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGAGGCGTCCTACTTCTTaGCTAACACCCAGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ETAASLGASLVGLQGGEERRPTS*LTPRQP
Trigger: GGGCTGCCTGGGTGTTAGCAAAGAAGTAGGACGCCT...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361956.8
CDS-3UTR CAA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGCCACAGGGACAGTGCTaGTGGTGCCAACGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGEPQGQC*WCQRLP
Trigger: TGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGG...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCTaGTGGTGCCAACGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLPQGQC*WCQRLP
Trigger: TGGAAGGCGTTGGCACCACAAGCACTGTCCCTGTGG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS GCA 90 bp CTCGGCACTTGGCTCGCTGGTACTCACACATGGACTCGTAGGACCTaGCATCAGAGGCACAGATGGGTTTGGGTTGAGTCCTGGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LGTWLAGTHTWTRRT*HQRHRWVWVESWSS
Trigger: ACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCATGTGTGAGTACCAGCGAGCCAAGTGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS CCA 90 bp AGTATGGCACTGCACCTGGGTAAAGGAGCCATCCTCGCCACACTCTaGGACAAACACAGCTTCCTGAGGCTTCTTGGCTTGCTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SMALHLGKGAILATL*DKHSFLRLLGLLQG
Trigger: GCCCTGGAGCAAGCCAAGAAGCCTCAGGAAGCTGTGTTTGTCCCAGAGTGTGGCGAGGATGGCTCCTTTACCCAGGTGCAGTGCCATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATACAGATGGGTTTGGGTaGAGTCCTGGAGCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDTDGFG*SPGAVE
Trigger: CTCCACTGCTCCAGGACTCAACCCAAACCCATCTGT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGGGCTTGCTCCAGGGCTaGAGCCCGCTCCAGGCGACA +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWGLLQG*SPLQAT
Trigger: TGTCGCCTGGAGCGGGCTCAAGCCCTGGAGCAAGCC...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTAGTGGACTGGTGGCATaGCACTGGCTTATAGAGTCC +
Preference number: 5 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLSGLVA*HWLIES
Trigger: GGACTCTATAAGCCAGTGCAATGCCACCAGTCCACT...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCCAATGCTGGGCCCTTaGGGGGTCCGGAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRPMLGP*GVRRAG
Trigger: TCCTGCTCTCCGGACCCCCAAAGGGCCCAGCATTGG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CCTCCTTTAGCCCAAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCTCAGCTCCGGCACGTaGAGTTCTCTCATTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PPLAQDPIRSCPEKVVLLLSSGT*SSLIGA
Trigger: AGCCCCAATGAGAGAACTCAACGTGCCGGAGCTGAG...GAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTTGGGCTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS GCA 90 bp CAGAGGCACAGATGGGTTTGGGTTGAGTCCTGGAGCAGTGGAGGTTaGACTGTGGGTCACGGTCACTTATTAGAAACCTGGGGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: QRHRWVWVESWSSGG*TVGHGHLLETWGLW
Trigger: CCACAGGCCCCAGGTTTCTAATAAGTGACCGTGACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS GCA 90 bp GATCCATCCTGCCTCCCTGGACTCTCCACCTGCCCTTGGGTTTTCTaGTCCTTAGACGAGGCGTCCTACTTCTTTGCTAACACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: DPSCLPGLSTCPWVF*SLDEASYFFANTQA
Trigger: TGCCTGGGTGTTAGCAAAGAAGTAGGACGCCTCGTCTAAGGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGGGAGGCAGGATGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361956.8
CDS CCA 90 bp GGTACTCACACATGGACTCGTAGGACCTGCCATCAGAGGCACAGATaGGTTTGGGTTGAGTCCTGGAGCAGTGGAGGTTGCACTGTGGGT +
Preference number: 5 (lower is better)
Translates to: GTHTWTRRTCHQRHR*VWVESWSSGGCTVG
Trigger: ACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCATGTGTGAGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS-3UTR CAA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTACAGATGGGTTTGGGTaGAGTCCTGGAGCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCTDGFG*SPGAVE
Trigger: CTCCACTGCTCCAGGACTCAACCCAAACCCATCTGT...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTGGCTTCATCTCCCGCTaGTTAATGTCGTTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: HCHHSCLWEGALRATCCSGFISR*LMSLLL
Trigger: TAGCAGCAACGACATTAACAAGCGGGAGATGAAGCC...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGCCTGTCCCGAGAAGGTaGTGCTCCTCCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRPVPRR*CSSHRD
Trigger: GTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGG...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATATGTCGTTGCTGCTATaGCTGTCCAGCTGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDMSLLL*LSSWLK
Trigger: TTTCAGCCAGCTGGACAGCAATAGCAGCAACGACAT...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGGGCTTCATCTCCCGCTaGTTAATGTCGTTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: ETAASLGASLVGLQGGEEGFISR*LMSLLL
Trigger: TAGCAGCAACGACATTAACAAGCGGGAGATGAAGCC...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GGACAGTGCTTGTGGTGCCAACGCCTTCCAGACCCGGAACGGGTGGAGGTACTTGGCAGTGAAATGACCTaGTCTTTGTTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: GQCLWCQRLPDPERVEVLGSEMT*SLFRSQ
Trigger: CTGTGACCTGAACAAAGACAAGGTCATTTCACTGCC...AAGTACCTCCACCCGTTCCGGGTCTGGAAGGCGTTGGCACCACAAGCACTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CCACACAACACCACCTACACACACGATCCTGTGGGAGACAAGATGCCTGGGGAGACTCTCCACCTGCCCTaGGGTTTTCTGCTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: PHNTTYTHDPVGDKMPGETLHLP*GFLLLR
Trigger: TCTAAGGAGCAGAAAACCCAAGGGCAGGTGGAGAGT...CTCCCCAGGCATCTTGTCTCCCACAGGATCGTGTGTGTAGGTGGTGTTGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGGAGTCCGCAGTACAATaGCAGGACTCCCGTCTTTAT +
Preference number: 5 (lower is better)
Translates to: ETAASLGASLVGLQGGEEESAVQ*QDSRLY
Trigger: ATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTGCCTCACTGGTAGGTTaGCAGGGAGGTGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSASLVG*QGGEEF
Trigger: AAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGC...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp CACTGCCACCACAGCTGCTTATGGGAAGGGGCGCTAAGGGCCACTTGCTGCTCTTTTAGGGATGTCGGGTaGGAATACAAGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HCHHSCLWEGALRATCCSFRDVG*EYKMRP
Trigger: TGGCCTCATCTTGTATTCCAACCCGACATCCCTAAA...AGAGCAGCAAGTGGCCCTTAGCGCCCCTTCCCATAAGCAGCTGTGGTGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS CCA 90 bp CGTAGGACCTGCCATCAGAGGCACAGATGGGTTTGGGTTGAGTCCTaGAGCAGTGGAGGTTGCACTGTGGGTCACGGTCACTTATTAGAA +
Preference number: 5 (lower is better)
Translates to: RRTCHQRHRWVWVES*SSGGCTVGHGHLLE
Trigger: TTCTAATAAGTGACCGTGACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS-3UTR CAA 90 bp GTGAAGAGTTTCCCTGTTGGCACCGCACCCCTCAGTGCAGGCTTTCTGTCCTGTATGTCGTTGCTGCTATaGCTGTCCAGCTGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: VKSFPVGTAPLSAGFLSCMSLLL*LSSWLK
Trigger: TTTCAGCCAGCTGGACAGCAATAGCAGCAACGACAT...ACAGGACAGAAAGCCTGCACTGAGGGGTGCGGTGCCAACAGGGAAACTCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTTTAGGGATGTCGGGTaGGAATACAAGATGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDFRDVG*EYKMRP
Trigger: TGGCCTCATCTTGTATTCCAACCCGACATCCCTAAA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GAGACAGCTGCGTCTCTGGGAGCCTCACTGGTAGGTTTGCAGGGAGGTGAAGAGTTGGTGTTGTTCAGTTaGGAGTCCTTGATCACCAAG +
Preference number: 5 (lower is better)
Translates to: ETAASLGASLVGLQGGEELVLFS*ESLITK
Trigger: CTTGGTGATCAAGGACTCCAAACTGAACAACACCAA...CTCTTCACCTCCCTGCAAACCTACCAGTGAGGCTCCCAGAGACGCAGCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCAGACCAGAAGGCTGGGCAGCCCACCCTAGAATCCGCGGAAGATGCCTGTGATTCCTTTGTGGATAATTaGCTCCGAGGGTCACTAAGA +
Preference number: 5 (lower is better)
Translates to: SDQKAGQPTLESAEDACDSFVDN*LRGSLR
Trigger: TCTTAGTGACCCTCGGAGCAAATTATCCACAAAGGA...ATCACAGGCATCTTCCGCGGATTCTAGGGTGGGCTGCCCAGCCTTCTGGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGCTGCCTGAAGGCCACTaGAATAGGCACAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWLPEGH*NRHSTW
Trigger: CCAGGTGCTGTGCCTATTCAAGTGGCCTTCAGGCAG...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS GCA 90 bp CAGAGGCACAGATGGGTTTGGGTTGAGTCCTGGAGCAGTGGAGGTTaGACTGTGGGTCACGGTCACTTATTAGAAACATGTTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: QRHRWVWVESWSSGG*TVGHGHLLETCLWS
Trigger: GGACCACAAACATGTTTCTAATAAGTGACCGTGACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555917.1
CDS-3UTR CAA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTGTCGGGTCTCGGCACTaGGCTCGCTGGTACTCACAC +
Preference number: 5 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSVGSRH*ARWYSH
Trigger: GTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGAC...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGAGTGGACTGGTGGCATaGCACTGGCTTATAGAGTCC +
Preference number: 5 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRSGLVA*HWLIES
Trigger: GGACTCTATAAGCCAGTGCAATGCCACCAGTCCACT...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGCGCCGGGCACATTTCTaGGGCTTGGCTTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWRRAHF*GLAFFF
Trigger: GAAGAAGAAAGCCAAGCCCAAGAAATGTGCCCGGCG...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGACTCTCCACCTGCCCTaGGGTTTTCTGCTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRTLHLP*GFLLLR
Trigger: TCTAAGGAGCAGAAAACCCAAGGGCAGGTGGAGAGT...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GCTCCGAGGGTCACTAAGATACTGGTGCACCCACCAATGCTGGGCCCTTTGGGGTCTGAATTTCTTATGTaGGTGTTGTTCAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: APRVTKILVHPPMLGPLGSEFLM*VLFSLE
Trigger: CTCCAAACTGAACAACACCAACATAAGAAATTCAGA...CCCCAAAGGGCCCAGCATTGGTGGGTGCACCAGTATCTTAGTGACCCTCGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGGCCTCACTGGTAGGTTaGCAGGGAGGTGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWASLVG*QGGEEF
Trigger: AAACTCTTCACCTCCCTGCAAACCTACCAGTGAGGC...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCGGCAGTGAAATGACCTaGTCTTTGTTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTGSEMT*SLFRSQ
Trigger: CTGTGACCTGAACAAAGACAAGGTCATTTCACTGCC...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGGAGTCCGCAGTACAATaGCAGGACTCCCGTCTTTAT +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWESAVQ*QDSRLY
Trigger: ATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp AAGACCCCATCAGATCCTGTCCCGAGAAGGTTGTGCTCCTCCCACAGGGACAGTAGTGACTTATCAATTTaGACAACTAATGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: KTPSDPVPRRLCSSHRDSSDLSI*TTNGMG
Trigger: CCCCATGCCATTAGTTGTCAAAATTGATAAGTCACT...ACTGTCCCTGTGGGAGGAGCACAACCTTCTCGGGACAGGATCTGATGGGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCAAACAGAAGTCTGCCTGAAGGCCACTaGAATAGGCACAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: YNCRTPVFIHKGQSPNRSLPEGH*NRHSTW
Trigger: CCAGGTGCTGTGCCTATTCAAGTGGCCTTCAGGCAG...ACTTCTGTTTGGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp GAGTCCGCAGTACAATTGCAGGACTCCCGTCTTTATACACAAGGGTCAGTCTCCTTGGTGTTGTTCAGTTaGGAGTCCTTGATCACCAAG +
Preference number: 5 (lower is better)
Translates to: ESAVQLQDSRLYTQGSVSLVLFS*ESLITK
Trigger: CTTGGTGATCAAGGACTCCAAACTGAACAACACCAA...GGAGACTGACCCTTGTGTATAAAGACGGGAGTCCTGCAATTGTACTGCGGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTCCTTTGTGGATAATTaGCTCCGAGGGTCACTAAGA +
Preference number: 5 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRSFVDN*LRGSLR
Trigger: TCTTAGTGACCCTCGGAGCAAATTATCCACAAAGGA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS TCA 90 bp GTAACCTCAGACTTCTTAATAGTCATTTTTCAAAGTCTGAGGCATTaGGGCTTCAGCTCTCTCCCACATCCACTCCTCCCAGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: VTSDFLIVIFQSLRH*GFSSLPHPLLPVPL
Trigger: GAGGGGAACTGGGAGGAGTGGATGTGGGAGAGAGCTGAAGCCTCAATGCCTCAGACTTTGAAAAATGACTATTAAGAAGTCTGAGGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557483.1
CDS-3UTR CAA 90 bp AACAACTTTAGTGTTACCAACAAGGTGACTGACACCTCCCCCAACCCACCCACCTTCAGTTTGGAGTCCTaGATCACCAAGTGTTTAATC +
Preference number: 5 (lower is better)
Translates to: NNFSVTNKVTDTSPNPPTFSLES*ITKCLI
Trigger: GATTAAACACTTGGTGATCAAGGACTCCAAACTGAA...GGTGGGTGGGTTGGGGGAGGTGTCAGTCACCTTGTTGGTAACACTAAAGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGTTCAGTTTGGAGTCCTaGATCACCAAGTGTTTAATC +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWFSLES*ITKCLI
Trigger: GATTAAACACTTGGTGATCAAGGACTCCAAACTGAA...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp TCCTGTGGGAGACAAGATGCCTGGGGAGATCTCGAAGATCCAAACATCTACAGGTCTGAATTTCTTATGTaGGTGTTGTTCAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: SCGRQDAWGDLEDPNIYRSEFLM*VLFSLE
Trigger: CTCCAAACTGAACAACACCAACATAAGAAATTCAGA...CCTGTAGATGTTTGGATCTTCGAGATCTCCCCAGGCATCTTGTCTCCCACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS-3UTR CAA 90 bp ACACAAGGGTCAGTCTCCAAACAGAAGTTTAGTAGGCCCAGGATAGAGTCCTGGAGTGACTTATCAATTTaGACAACTAATGGCATGGGG +
Preference number: 5 (lower is better)
Translates to: TQGSVSKQKFSRPRIESWSDLSI*TTNGMG
Trigger: CCCCATGCCATTAGTTGTCAAAATTGATAAGTCACT...CCAGGACTCTATCCTGGGCCTACTAAACTTCTGTTTGGAGACTGACCCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS TCA 90 bp GACAGAGTGAGACTCCATATAAGTGCATTTATCCTTATGACGCTCTaGAAAGTCGGTATGTTAAAGTTACAGTCTGTGGGCCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: DRVRLHISAFILMTL*KVGMLKLQSVGLKV
Trigger: GACTTTGAGGCCCACAGACTGTAACTTTAACATACCGACTTTTCAGAGCGTCATAAGGATAAATGCACTTATATGGAGTCTCACTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555917.1
CDS GCA 72 bp GGGCCTGTGGTGCGGTGGCCGCGAGCAGGGGACAGCTaGACCAACACCAGCAGCAAGTGGGGCGTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPVVRWPRAGDS*TNTSSKWGVSR
Trigger: CCTGCTCACGCCCCACTTGCTGCTGGTGTTGGTGCAGCTGTCCCCTGCTCGCGGCCACCGCACCACAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS CCA 72 bp CGGTCACTTATTAGAAACCTGGGGCCTGTGGTGCGGTaGCCGCGAGCAGGGGACAGCTGCACCAACACCAGC +
Preference number: 6 (lower is better)
Translates to: RSLIRNLGPVVR*PRAGDSCTNTS
Trigger: GCTGGTGTTGGTGCAGCTGTCCCCTGCTCGCGGCCACCGCACCACAGGCCCCAGGTTTCTAATAAGTGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS CCA 72 bp CTCGATGCACCACGCCCAGGGTCGGGTCTCGGCACTTaGCTCGCTGGTACTCACACATGGACTCGTAGGACC +
Preference number: 6 (lower is better)
Translates to: LDAPRPGSGLGT*LAGTHTWTRRT
Trigger: GGTCCTACGAGTCCATGTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGACCCTGGGCGTGGTGCATCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS CAA 90 bp CTCGCCACACTCTGGGACAAACACAGCTTCCTGAGGCTTCTTGGCTaGCTCCAGGGCTTGAGCCCGCTCCAGGCGACACTTGCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LATLWDKHSFLRLLG*LQGLSPLQATLALA
Trigger: GGCCAGAGCAAGTGTCGCCTGGAGCGGGCTCAAGCCCTGGAGCAAGCCAAGAAGCCTCAGGAAGCTGTGTTTGTCCCAGAGTGTGGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
CDS GCA 72 bp CACTTGCTCTGGCCAGCATCTTTGCATCTACCTCGATaGACCACGCCCAGGGTCGGGTCTCGGCACTTGGCT +
Preference number: 6 (lower is better)
Translates to: HLLWPASLHLPR*TTPRVGSRHLA
Trigger: AGCCAAGTGCCGAGACCCGACCCTGGGCGTGGTGCATCGAGGTAGATGCAAAGATGCTGGCCAGAGCAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
CDS GCA 72 bp CTTGCTCCAGGGCTTGAGCCCGCTCCAGGCGACACTTaGTCTGGCCAGCATCTTTGCATCTACCTCGATGCA +
Preference number: 6 (lower is better)
Translates to: LAPGLEPAPGDT*SGQHLCIYLDA
Trigger: TGCATCGAGGTAGATGCAAAGATGCTGGCCAGAGCAAGTGTCGCCTGGAGCGGGCTCAAGCCCTGGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
CDS CCA 72 bp TCGGGTCTCGGCACTTGGCTCGCTGGTACTCACACATaGACTCGTAGGACCTGCCATCAGAGGCACAGATGG +
Preference number: 6 (lower is better)
Translates to: SGLGTWLAGTHT*TRRTCHQRHRW
Trigger: CCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCATGTGTGAGTACCAGCGAGCCAAGTGCCGAGACCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS CAA 72 bp CTCTGGGACAAACACAGCTTCCTGAGGCTTCTTGGCTaGCTCCAGGGCTTGAGCCCGCTCCAGGCGACACTT +
Preference number: 6 (lower is better)
Translates to: LWDKHSFLRLLG*LQGLSPLQATL
Trigger: AAGTGTCGCCTGGAGCGGGCTCAAGCCCTGGAGCAAGCCAAGAAGCCTCAGGAAGCTGTGTTTGTCCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
CDS CAA 90 bp CATGGACTCGTAGGACCTGCCATCAGAGGCACAGATGGGTTTGGGTaGAGTCCTGGAGCAGTGGAGGTTGCACTGTGGGTCACGGTCACT +
Preference number: 6 (lower is better)
Translates to: HGLVGPAIRGTDGFG*SPGAVEVALWVTVT
Trigger: AGTGACCGTGACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS CCA 72 bp GTTGGGGCTGTGATTTCATCTCCATCGAACACCGGCTaGGTCTCCATCGTGGGTGTCGGCTTAGACCCGTCA +
Preference number: 6 (lower is better)
Translates to: VGAVISSPSNTG*VSIVGVGLDPS
Trigger: TGACGGGTCTAAGCCGACACCCACGATGGAGACCCAGCCGGTGTTCGATGGAGATGAAATCACAGCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS CAA 72 bp GTAGGACCTGCCATCAGAGGCACAGATGGGTTTGGGTaGAGTCCTGGAGCAGTGGAGGTTGCACTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: VGPAIRGTDGFG*SPGAVEVALWV
Trigger: GACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS CAA 72 bp TTCTTCCCTTCTGGACAGCCTGGTAGCTCCCTGTCCTaGAAGGGGTCATCCGCCTCTGTAGTCTTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: FFPSGQPGSSLS*KGSSASVVLAL
Trigger: CAGGGCCAAGACTACAGAGGCGGATGACCCCTTCAAGGACAGGGAGCTACCAGGCTGTCCAGAAGGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS GCA 72 bp TGGCTCGCTGGTACTCACACATGGACTCGTAGGACCTaGCATCAGAGGCACAGATGGGTTTGGGTTGAGTCC +
Preference number: 6 (lower is better)
Translates to: WLAGTHTWTRRT*HQRHRWVWVES
Trigger: GGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCATGTGTGAGTACCAGCGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS GCA 72 bp TGCCTCCCTGGACTCTCCACCTGCCCTTGGGTTTTCTaGTCCTTAGACGAGGCGTCCTTCTTTGCTAACACC +
Preference number: 6 (lower is better)
Translates to: CLPGLSTCPWVF*SLDEASFFANT
Trigger: GGTGTTAGCAAAGAAGGACGCCTCGTCTAAGGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGGGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381280.4
CDS CCA 72 bp ACATGGACTCGTAGGACCTGCCATCAGAGGCACAGATaGGTTTGGGTTGAGTCCTGGAGCAGTGGAGGTTGC +
Preference number: 6 (lower is better)
Translates to: TWTRRTCHQRHR*VWVESWSSGGC
Trigger: GCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCTGTGCCTCTGATGGCAGGTCCTACGAGTCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361956.8
ENST00000381280.4
ENST00000553839.1
ENST00000555917.1
CDS GCA 72 bp TGCCTCCCTGGACTCTCCACCTGCCCTTGGGTTTTCTaGTCCTTAGACGAGGCGTCCTACTTCTTTGCTAAC +
Preference number: 6 (lower is better)
Translates to: CLPGLSTCPWVF*SLDEASYFFAN
Trigger: GTTAGCAAAGAAGTAGGACGCCTCGTCTAAGGAGCAGAAAACCCAAGGGCAGGTGGAGAGTCCAGGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361956.8
CDS GCA 72 bp AGATGGGTTTGGGTTGAGTCCTGGAGCAGTGGAGGTTaGACTGTGGGTCACGGTCACTTATTAGAAACCTGG +
Preference number: 6 (lower is better)
Translates to: RWVWVESWSSGG*TVGHGHLLETW
Trigger: CCAGGTTTCTAATAAGTGACCGTGACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS CAA 72 bp GGCTTCATCTCCCGCTTGTTAATGTCGTTGCTGCTATaGCTGTCCAGCTGGCTGAAATACCAGTGCACTACC +
Preference number: 6 (lower is better)
Translates to: GFISRLLMSLLL*LSSWLKYQCTT
Trigger: GGTAGTGCACTGGTATTTCAGCCAGCTGGACAGCAATAGCAGCAACGACATTAACAAGCGGGAGATGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS GCA 72 bp AGATGGGTTTGGGTTGAGTCCTGGAGCAGTGGAGGTTaGACTGTGGGTCACGGTCACTTATTAGAAACATGT +
Preference number: 6 (lower is better)
Translates to: RWVWVESWSSGG*TVGHGHLLETC
Trigger: ACATGTTTCTAATAAGTGACCGTGACCCACAGTGCAACCTCCACTGCTCCAGGACTCAACCCAAACCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555917.1
CDS CCA 72 bp ATAAAACTCCACTCACCTTTCCTTCCTGAGTTACCCTaGCTCAAGGGCTTGTCGGTGACTGAACCTGAACAT +
Preference number: 6 (lower is better)
Translates to: IKLHSPFLPELP*LKGLSVTEPEH
Trigger: ATGTTCAGGTTCAGTCACCGACAAGCCCTTGAGCCAGGGTAACTCAGGAAGGAAAGGTGAGTGGAGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553839.1
CDS CAA 72 bp TCACCTTTCCTTCCTGAGTTACCCTGGCTCAAGGGCTaGTCGGTGACTGAACCTGAACATACAGGAGTTTTA +
Preference number: 6 (lower is better)
Translates to: SPFLPELPWLKG*SVTEPEHTGVL
Trigger: TAAAACTCCTGTATGTTCAGGTTCAGTCACCGACAAGCCCTTGAGCCAGGGTAACTCAGGAAGGAAAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553839.1
CDS CAA 90 bp TGTAACCTCAGACTTCTTAATAGTCATTTTTCAAAGTCTGAGGCATaGAGGCTTCAGCTCTCTCCCACATCCACTCCTCCCAGTTCCCCT +
Preference number: 6 (lower is better)
Translates to: CNLRLLNSHFSKSEA*RLQLSPTSTPPSSP
Trigger: AGGGGAACTGGGAGGAGTGGATGTGGGAGAGAGCTGAAGCCTCAATGCCTCAGACTTTGAAAAATGACTATTAAGAAGTCTGAGGTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557483.1
CDS GCA 72 bp TATGTTAAAGTTACAGTCTGTGGGCCTCAAAGTCTATaGTCTTTCCACCACACCACGTGGAAGGGAACCATC +
Preference number: 6 (lower is better)
Translates to: YVKVTVCGPQSL*SFHHTTWKGTI
Trigger: GATGGTTCCCTTCCACGTGGTGTGGTGGAAAGAGCATAGACTTTGAGGCCCACAGACTGTAACTTTAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555917.1
CDS CAA 72 bp TCATCTTTCCTTCCTGAGTTACCCTGGCTCAAGGGCTaGTCGGTGACTGAACCTGAACATACAGGAGTTTTA +
Preference number: 6 (lower is better)
Translates to: SSFLPELPWLKG*SVTEPEHTGVL
Trigger: TAAAACTCCTGTATGTTCAGGTTCAGTCACCGACAAGCCCTTGAGCCAGGGTAACTCAGGAAGGAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361956.8
ENST00000381280.4
CDS TCA 72 bp GACTTCTTAATAGTCATTTTTCAAAGTCTGAGGCATTaGGGCTTCAGCTCTCTCCCACATCCACTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: DFLIVIFQSLRH*GFSSLPHPLLP
Trigger: TGGGAGGAGTGGATGTGGGAGAGAGCTGAAGCCTCAATGCCTCAGACTTTGAAAAATGACTATTAAGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557483.1
CDS CAA 72 bp AGACTTCTTAATAGTCATTTTTCAAAGTCTGAGGCATaGAGGCTTCAGCTCTCTCCCACATCCACTCCTCCC +
Preference number: 6 (lower is better)
Translates to: RLLNSHFSKSEA*RLQLSPTSTPP
Trigger: GGGAGGAGTGGATGTGGGAGAGAGCTGAAGCCTCAATGCCTCAGACTTTGAAAAATGACTATTAAGAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557483.1