Pregenerated sensors for SMIM9 (Homo sapiens)
Ensembl gene IDs: ENSG00000203870Ensembl transcript IDs: ENST00000369529.1, ENST00000478043.1, ENST00000578244.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTaGAGAGACCACACTTGCCCTGTTGAATCTTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: ADSKCPTLLESN*RDHTCPVESSS Trigger: ACTAGAAGATTCAACAGGGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCGCTTCTGGGGTTCCATaGACTCCCGCCTTCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCASGVP*TPAFSC Trigger: GCAGCTGAAGGCGGGAGTCCATGGAACCCCAGAAGC...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR TCA 90 bp | CAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCGCCTTCAGCTGCGGCTaGAGAGCTGGTAATCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: QIANAPLFWSPTGETTLAAFSCG*RAGNPS Trigger: GCTAGGATTACCAGCTCTTCAGCCGCAGCTGAAGGC...GGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR TCA 90 bp | CAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCCCTGTGATTACCCCCTaGGCGTGGTTTCGATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: QIANAPLFWSPTGETTLAPVITP*AWFRSC Trigger: ACAGGATCGAAACCACGCTCAGGGGGTAATCACAGG...GGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CCA 90 bp | CAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCATTATCAGCAGCTTCTaGGGTTCCATGGACTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QIANAPLFWSPTGETTLAIISSF*GSMDSR Trigger: GCGGGAGTCCATGGAACCCCAGAAGCTGCTGATAAT...GGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR TCA 90 bp | CAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCGCCATAAGTAATCCCTaGAGTTGTTCAGCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: QIANAPLFWSPTGETTLAAISNP*SCSART Trigger: GGTCCTGGCTGAACAACTTCAGGGATTACTTATGGC...GGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCTTTTGGAGTCCAACTaGAGAGACCACACTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCLLESN*RDHTCP Trigger: AGGGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAG...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCAATGCCCCACTCTTTTaGAGTCCAACTGGAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCNAPLF*SPTGET Trigger: GGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATT...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR GCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCAATCCTAGCTCACTCTaGCAAGGAGAGATGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCNPSSL*QGEMSL Trigger: CAAAGACATCTCTCCTTGGCAGAGTGAGCTAGGATT...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR GCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCTGGAGAGACCACACTTaGCCTGTTGAATCTTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCWRDHT*PVESSS Trigger: ACTAGAAGATTCAACAGGGCAAGTGTGGTCTCTCCA...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCAGTTCTTCAGTGGACTaGATCAACTACAAGAATGGT | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCSSSVD*INYKNG Trigger: ACCATTCTTGTAGTTGATCCAGTCCACTGAAGAACT...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CCA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCTTCTAGTTCTTCAGTaGACTGGATCAACTACAAGA | + |
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Preference number: 4 (lower is better) Translates to: ADSKCPTLLESNWRDHTCLLVLQ*TGSTTR Trigger: TCTTGTAGTTGATCCAGTCCACTGAAGAACTAGAAG...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS TCA 90 bp | TCAGCAGCTTCTGGGGTTCCATGGACTCCCGCCTTCAGCTGCGGCTaGAGAGCTGGTAATCCTAGCTCACTCTGCCAAGGAGAGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: SAASGVPWTPAFSCG*RAGNPSSLCQGEMS Trigger: AGACATCTCTCCTTGGCAGAGTGAGCTAGGATTACCAGCTCTTCAGCCGCAGCTGAAGGCGGGAGTCCATGGAACCCCAGAAGCTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000478043.1 |
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| CDS CCA 90 bp | AGGCAAGTTAGAGAGCATAGCAGAAATCCAATTATCAGCAGCTTCTaGGGTTCCATGGACTCCCGCCTTCAGCTGCGGCTGAAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RQVREHSRNPIISSF*GSMDSRLQLRLKSW Trigger: CCAGCTCTTCAGCCGCAGCTGAAGGCGGGAGTCCATGGAACCCCAGAAGCTGCTGATAATTGGATTTCTGCTATGCTCTCTAACTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000478043.1 |
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| CDS-3UTR CAA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCAAATGCCCCACTCTTTaGGAGTCCAACTGGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: ADSKCPTLLESNWRDHTCKCPTL*ESNWRD Trigger: GTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTT...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CAA 90 bp | CAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCCAAGGAGAGATGTCTTaGTCCGTAGGTCTTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: QIANAPLFWSPTGETTLAQGEMS*SVGLST Trigger: TGTGGAAAGACCTACGGACAAAGACATCTCTCCTTG...GGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS CCA 90 bp | ACTGGAGAGACCACACTTGCCCTGTTGAATCTTCTAGTTCTTCAGTaGACTGGATCAACTACAAGAATGGTGAAGCAGCAGAGGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: TGETTLALLNLLVLQ*TGSTTRMVKQQRIP Trigger: GGGGATCCTCTGCTGCTTCACCATTCTTGTAGTTGATCCAGTCCACTGAAGAACTAGAAGATTCAACAGGGCAAGTGTGGTCTCTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS-3UTR CAA 90 bp | GCAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCACCACACTTGCCCTGTaGAATCTTCTAGTTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ADSKCPTLLESNWRDHTCTTLAL*NLLVLQ Trigger: CTGAAGAACTAGAAGATTCAACAGGGCAAGTGTGGT...GCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS GCA 90 bp | AGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTaGCCTGTTGAATCTTCTAGTTCTTCAGTGGACTGGATCAACTAC | + |
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Preference number: 5 (lower is better) Translates to: SKCPTLLESNWRDHT*PVESSSSSVDWINY Trigger: GTAGTTGATCCAGTCCACTGAAGAACTAGAAGATTCAACAGGGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000578244.1 |
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| CDS-3UTR CAA 90 bp | CAGATAGCAAATGCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCCTTTCCACAGAAACTTaGTCTGAAAATGGACTTAGG | + |
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Preference number: 5 (lower is better) Translates to: QIANAPLFWSPTGETTLALSTET*SENGLR Trigger: CCTAAGTCCATTTTCAGACAAAGTTTCTGTGGAAAG...GGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGCATTTGCTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369529.1 |
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| CDS TCA 72 bp | TCTGGGGTTCCATGGACTCCCGCCTTCAGCTGCGGCTaGAGAGCTGGTAATCCTAGCTCACTCTGCCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGVPWTPAFSCG*RAGNPSSLCQG Trigger: TCCTTGGCAGAGTGAGCTAGGATTACCAGCTCTTCAGCCGCAGCTGAAGGCGGGAGTCCATGGAACCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000478043.1 |
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| CDS CCA 72 bp | AGAGAGCATAGCAGAAATCCAATTATCAGCAGCTTCTaGGGTTCCATGGACTCCCGCCTTCAGCTGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: REHSRNPIISSF*GSMDSRLQLRL Trigger: CAGCCGCAGCTGAAGGCGGGAGTCCATGGAACCCCAGAAGCTGCTGATAATTGGATTTCTGCTATGCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000478043.1 |
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| CDS GCA 72 bp | CCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTaGCCTGTTGAATCTTCTAGTTCTTCAGTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: PTLLESNWRDHT*PVESSSSSVDW Trigger: CCAGTCCACTGAAGAACTAGAAGATTCAACAGGGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000578244.1 |
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| CDS CAA 90 bp | GCCCCACTCTTTTGGAGTCCAACTGGAGAGACCACACTTGCCCTGTaGAATCTTCTAGTTCTTCAGTGGACTGGATCAACTACAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: APLFWSPTGETTLAL*NLLVLQWTGSTTRM Trigger: CATTCTTGTAGTTGATCCAGTCCACTGAAGAACTAGAAGATTCAACAGGGCAAGTGTGGTCTCTCCAGTTGGACTCCAAAAGAGTGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369529.1 ENST00000578244.1 |
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| CDS CAA 72 bp | AGTTTCTGTAGGTTAGTTTTGGAGTGGATGATGAGATaGGAGTCATGTATCTGCTGGGACTGCAGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: SFCRLVLEWMMR*ESCICWDCSHL Trigger: CAGATGACTGCAGTCCCAGCAGATACATGACTCCAATCTCATCATCCACTCCAAAACTAACCTACAGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478043.1 |
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| CDS TCA 72 bp | TTCAGTGGACTGGATCAACTACAAGAATGCTCATTCTaGTGTAAGTTAAGTTCTCCTCCACAAGGTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: FSGLDQLQECSF*CKLSSPPQGDS Trigger: TGAATCACCTTGTGGAGGAGAACTTAACTTACATCAGAATGAGCATTCTTGTAGTTGATCCAGTCCACTGAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000578244.1 |
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