RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMIM8 (Homo sapiens)

Ensembl gene IDs: ENSG00000111850

Ensembl transcript IDs: ENST00000229570.9, ENST00000369570.4, ENST00000369572.3, ENST00000392863.6, ENST00000448282.6, ENST00000608353.5, ENST00000608525.5, ENST00000608535.1, ENST00000608868.2

Found 249 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCATATCTCCAGCCTGTTGCAGCCTCTCCTGCTTGGATCTCTGTTaGTTTGCTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTCA +
Preference number: 1 (lower is better)
Translates to: CISPACCSLSCLDLC*FASSRRHTPVGTSS
Trigger: TGAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACAGGCTGGAGATATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 90 bp GTTTTCCTCTTCCATCCGTGCCTCAAACTAGGCAGCTTCCAATGGTaGCCTGGGCTTCAGAAGGTGGCCACTGAGCTGACCTCTAGGCTT +
Preference number: 1 (lower is better)
Translates to: VFLFHPCLKLGSFQW*PGLQKVATELTSRL
Trigger: AAGCCTAGAGGTCAGCTCAGTGGCCACCTTCTGAAGCCCAGGGCACCATTGGAAGCTGCCTAGTTTGAGGCACGGATGGAAGAGGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CCA 90 bp AGTGTTTTCCTCTTCCATCCGTGCCTCAAACTAGGCAGCTTCCAATaGTGCCCTGGGCTTCAGAAGGTGGCCACTGAGCTGACCTCTAGG +
Preference number: 1 (lower is better)
Translates to: SVFLFHPCLKLGSFQ*CPGLQKVATELTSR
Trigger: CCTAGAGGTCAGCTCAGTGGCCACCTTCTGAAGCCCAGGGCACCATTGGAAGCTGCCTAGTTTGAGGCACGGATGGAAGAGGAAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CCA 90 bp TCAGAAGAAGAGCTTCCTCTGACTCCAGCTTTGGCTCTCCTGCCTTaGGATCCCCAACCCACCCCCAAGCACCCTTGTATGCATTCCTCA +
Preference number: 1 (lower is better)
Translates to: SEEELPLTPALALLP*DPQPTPKHPCMHSS
Trigger: TGAGGAATGCATACAAGGGTGCTTGGGGGTGGGTTGGGGATCCCAAGGCAGGAGAGCCAAAGCTGGAGTCAGAGGAAGCTCTTCTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 90 bp ATCTCCAGCCTGTTGCAGCCTCTCCTGCTTGGATCTCTGTTGCTTTaGTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTCATACAT +
Preference number: 1 (lower is better)
Translates to: ISSLLQPLLLGSLLL*FIPEAHSCGHFLIH
Trigger: ATGTATGAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACAGGCTGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 90 bp CTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCCTCTTCCATCCGTaGCTCAAACTAGGCAGCTTCCAATGGTGCCCTGGGCTTCAGAAG +
Preference number: 1 (lower is better)
Translates to: LRKRDVVLSVFLFHP*LKLGSFQWCPGLQK
Trigger: CTTCTGAAGCCCAGGGCACCATTGGAAGCTGCCTAGTTTGAGGCACGGATGGAAGAGGAAAACACTGAGAACAACATCCCTCTTCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR TCA 90 bp CTGCACCTTGTACAGTTTCTGTTGCCCTCCTGCACTGCAATCTCTTaGCAGTTCACGCAACTAATAACTCCTCTGCCACCAAACATCAGC +
Preference number: 1 (lower is better)
Translates to: LHLVQFLLPSCTAIS*QFTQLITPLPPNIS
Trigger: GCTGATGTTTGGTGGCAGAGGAGTTATTAGTTGCGTGAACTGTCAAGAGATTGCAGTGCAGGAGGGCAACAGAAACTGTACAAGGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR GCA 90 bp TTTCCACTTGAGTTCTTTAAGATTTGGACAAACGACTGGTTTCTATaGAACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCA +
Preference number: 1 (lower is better)
Translates to: FPLEFFKIWTNDWFL*NHAGEGHVLSCSFP
Trigger: TGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGTTGCATAGAAACCAGTCGTTTGTCCAAATCTTAAAGAACTCAAGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CCA 90 bp ATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTaGTATATCAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTC +
Preference number: 1 (lower is better)
Translates to: MCFHLQSINILCSIQ*YIKNTVWPWGSVWV
Trigger: GACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTGATATACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 90 bp CTAGTTACTTTGGTTCATTCACATAGATCTTACATGACTCAAGTCTaGACCTTGTACAGTTTCTGTTGCCCTCCTGCACTGCAATCTCTT +
Preference number: 1 (lower is better)
Translates to: LVTLVHSHRSYMTQV*TLYSFCCPPALQSL
Trigger: AAGAGATTGCAGTGCAGGAGGGCAACAGAAACTGTACAAGGTGCAGACTTGAGTCATGTAAGATCTATGTGAATGAACCAAAGTAACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR GCA 90 bp CATTCCTTAGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTaGAGCATACAGTGGTATATCAAGAATACTGTCTGGCCTTGGGGT +
Preference number: 1 (lower is better)
Translates to: HSLAMCFHLQSINIL*SIQWYIKNTVWPWG
Trigger: ACCCCAAGGCCAGACAGTATTCTTGATATACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCTAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 90 bp GCAGCTGTGAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATG +
Preference number: 1 (lower is better)
Translates to: AAVKGQNLRQLSGCN*YLLSSLACSRTRNM
Trigger: CATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTCACAGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
3UTR CAA 90 bp CTGCATATCTCCAGCCTGTTGCAGCCTCTCCTGCTTGGATCTCTGTaGCTTTGCTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTC +
Preference number: 2 (lower is better)
Translates to: LHISSLLQPLLLGSL*LCFIPEAHSCGHFL
Trigger: GAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACAGGCTGGAGATATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CAA 90 bp TATCTCCAGCCTGTTGCAGCCTCTCCTGCTTGGATCTCTGTTGCTTaGCTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTCATACA +
Preference number: 2 (lower is better)
Translates to: YLQPVAASPAWISVA*LHPGGTLLWALPHT
Trigger: TGTATGAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACAGGCTGGAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CAA 90 bp CTGGAAGAACACTCCCCCATGAAGACTCTGCATATCTCCAGCCTGTaGCAGCCTCTCCTGCTTGGATCTCTGTTGCTTTGCTTCATCCCG +
Preference number: 2 (lower is better)
Translates to: LEEHSPMKTLHISSL*QPLLLGSLLLCFIP
Trigger: CGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACAGGCTGGAGATATGCAGAGTCTTCATGGGGGAGTGTTCTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CAA 90 bp TTGAAATTACAGGTTTCAGAAGAAGAGCTTCCTCTGACTCCAGCTTaGGCTCTCCTGCCTTGGGATCCCCAACCCACCCCCAAGCACCCT +
Preference number: 2 (lower is better)
Translates to: LKLQVSEEELPLTPA*ALLPWDPQPTPKHP
Trigger: AGGGTGCTTGGGGGTGGGTTGGGGATCCCAAGGCAGGAGAGCCAAAGCTGGAGTCAGAGGAAGCTCTTCTTCTGAAACCTGTAATTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR GCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCGGCCCCTGGGCCAGGTaGCAGGACAACCAAGGCCAT +
Preference number: 2 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLAGPWAR*QDNQGH
Trigger: ATGGCCTTGGTTGTCCTGGCACCTGGCCCAGGGGCC...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
3UTR-3UTR GCA 90 bp TGCAGCCTCTCCTGCTTGGATCTCTGTTGCTTTGCTTCATCCCGGAGGCACACTAACGACTGGTTTCTATaGAACCACGCAGGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: CSLSCLDLCCFASSRRHTNDWFL*NHAGEG
Trigger: CCCTTCACCTGCGTGGTTGCATAGAAACCAGTCGTT...AGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CCA 90 bp GGAGCTGGAAGAACACTCCCCCATGAAGACTCTGCATATCTCCAGCCTGTTGCAGGAGGCACACTCCTGTaGGCACTTCCTCATACATAC +
Preference number: 2 (lower is better)
Translates to: GAGRTLPHEDSAYLQPVAGGTLL*ALPHTY
Trigger: GTATGTATGAGGAAGTGCCCACAGGAGTGTGCCTCC...TGCAACAGGCTGGAGATATGCAGAGTCTTCATGGGGGAGTGTTCTTCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CCA 90 bp GGGCAGGGAGCTGGAAGAACACTCCCCCATGAAGACTCTGCATATCTCCAGCCTATCAAGAATACTGTCTaGCCTTGGGGTTCAGTTTGG +
Preference number: 2 (lower is better)
Translates to: GQGAGRTLPHEDSAYLQPIKNTV*PWGSVW
Trigger: CCAAACTGAACCCCAAGGCCAGACAGTATTCTTGAT...AGGCTGGAGATATGCAGAGTCTTCATGGGGGAGTGTTCTTCCAGCTCCCTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR TCA 90 bp GAAAAGACATTGAAATTACAGGTTTCAGAAGAAGAGCTTCCTCTGACTCCAGCTGCCCCAGCTGAGGTCTaGGGACAGTGGGTGGATGTG +
Preference number: 2 (lower is better)
Translates to: EKTLKLQVSEEELPLTPAAPAEV*GQWVDV
Trigger: CACATCCACCCACTGTCCTCAGACCTCAGCTGGGGC...AGCTGGAGTCAGAGGAAGCTCTTCTTCTGAAACCTGTAATTTCAATGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR GCA 90 bp GGAGCTGGAAGAACACTCCCCCATGAAGACTCTGCATATCTCCAGCCTGTTGCAGGGCATGTTCTATCTTaGAGCTTTCCATTCCTTAGC +
Preference number: 2 (lower is better)
Translates to: GAGRTLPHEDSAYLQPVAGHVLS*SFPFLS
Trigger: GCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCC...TGCAACAGGCTGGAGATATGCAGAGTCTTCATGGGGGAGTGTTCTTCCAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CCA 90 bp CAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCCCTTGGGGTTCAGTTTaGGTCCTCAGCAGAGGAAGT +
Preference number: 2 (lower is better)
Translates to: QAPLYAFLRKRDVVLSVFPWGSV*VLSRGS
Trigger: ACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGG...GAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR GCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCCAACCAAGGCCATTCTaGTTCTCACCTCCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLAQPRPF*FSPPVG
Trigger: ACCCACTGGAGGTGAGAAGCAGAATGGCCTTGGTTG...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
3UTR-3UTR CCA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTGCTTCTCACCTCCAGTaGGTACTGACCGTAGGGCTA +
Preference number: 2 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTASHLQ*VLTVGL
Trigger: TAGCCCTACGGTCAGTACCCACTGGAGGTGAGAAGC...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR-3UTR CCA 90 bp GAAAAGACATTGAAATTACAGGTTTCAGAAGAAGAGCTTCCTCTGACTCCAGCTAATACTGTCTGGCCTTaGGGTTCAGTTTGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: EKTLKLQVSEEELPLTPANTVWP*GSVWVL
Trigger: GAGGACCCAAACTGAACCCCAAGGCCAGACAGTATT...AGCTGGAGTCAGAGGAAGCTCTTCTTCTGAAACCTGTAATTTCAATGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CAA 90 bp ACTTTGGTTCATTCACATAGATCTTACATGACTCAAGTCTGCACCTaGTACAGTTTCTGTTGCCCTCCTGCACTGCAATCTCTTGACAGT +
Preference number: 2 (lower is better)
Translates to: TLVHSHRSYMTQVCT*YSFCCPPALQSLDS
Trigger: ACTGTCAAGAGATTGCAGTGCAGGAGGGCAACAGAAACTGTACAAGGTGCAGACTTGAGTCATGTAAGATCTATGTGAATGAACCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR-3UTR CCA 90 bp CAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCCTGTGCAGCATACAGTaGTATATCAAGAATACTGTC +
Preference number: 2 (lower is better)
Translates to: QAPLYAFLRKRDVVLSVFLCSIQ*YIKNTV
Trigger: GACAGTATTCTTGATATACCACTGTATGCTGCACAG...GAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCTTTACGACAGTTGTCTaGTTGCAACTGCTATCTTCT +
Preference number: 2 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLAFTTVV*LQLLSS
Trigger: AGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAA...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
3UTR-3UTR TCA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTCCTTATTTTAGTAGCTaGGTGGAAGGATCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTPYFSS*VEGSFP
Trigger: TGGAAAAGATCCTTCCACTCAGCTACTAAAATAAGG...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR-3UTR GCA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTTTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTA +
Preference number: 2 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTLSGCN*YLLSSL
Trigger: TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAA...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR CCA 72 bp GAGCTTCCTCTGACTCCAGCTTTGGCTCTCCTGCCTTaGGATCCCCAACCCACCCCCAAGCACCCTTGTATG +
Preference number: 3 (lower is better)
Translates to: ELPLTPALALLP*DPQPTPKHPCM
Trigger: CATACAAGGGTGCTTGGGGGTGGGTTGGGGATCCCAAGGCAGGAGAGCCAAAGCTGGAGTCAGAGGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 72 bp TTCCATCCGTGCCTCAAACTAGGCAGCTTCCAATGGTaGCCTGGGCTTCAGAAGGTGGCCACTGAGCTGACC +
Preference number: 3 (lower is better)
Translates to: FHPCLKLGSFQW*PGLQKVATELT
Trigger: GGTCAGCTCAGTGGCCACCTTCTGAAGCCCAGGGCACCATTGGAAGCTGCCTAGTTTGAGGCACGGATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CCA 72 bp CTCTTCCATCCGTGCCTCAAACTAGGCAGCTTCCAATaGTGCCCTGGGCTTCAGAAGGTGGCCACTGAGCTG +
Preference number: 3 (lower is better)
Translates to: LFHPCLKLGSFQ*CPGLQKVATEL
Trigger: CAGCTCAGTGGCCACCTTCTGAAGCCCAGGGCACCATTGGAAGCTGCCTAGTTTGAGGCACGGATGGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CCA 72 bp TCTGCATATCTCCAGCCTGTTGCAGCCTCTCCTGCTTaGATCTCTGTTGCTTTGCTTCATCCCGGAGGCACA +
Preference number: 3 (lower is better)
Translates to: SAYLQPVAASPA*ISVALLHPGGT
Trigger: TGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACAGGCTGGAGATATGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CAA 90 bp GGTTTCAGAAGAAGAGCTTCCTCTGACTCCAGCTTTGGCTCTCCTGCCTTGGGAGCTGAGATCGCGCCATaGCACTCCAGCCAGAATATA +
Preference number: 3 (lower is better)
Translates to: GFRRRASSDSSFGSPALGAEIAP*HSSQNI
Trigger: TATATTCTGGCTGGAGTGCAATGGCGCGATCTCAGC...TCCCAAGGCAGGAGAGCCAAAGCTGGAGTCAGAGGAAGCTCTTCTTCTGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 72 bp AGGGATGTTGTTCTCAGTGTTTTCCTCTTCCATCCGTaGCTCAAACTAGGCAGCTTCCAATGGTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: RDVVLSVFLFHP*LKLGSFQWCPG
Trigger: CCCAGGGCACCATTGGAAGCTGCCTAGTTTGAGGCACGGATGGAAGAGGAAAACACTGAGAACAACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CAA 90 bp CAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCTGGATCTCTGTTGCTTaGCTTCATCCCGGAGGCACA +
Preference number: 3 (lower is better)
Translates to: QAPLYAFLRKRDVVLSVFWISVA*LHPGGT
Trigger: TGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCA...GAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CAA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCACGACAGTTGTCTGGTaGCAACTGCTATCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLATTVVW*QLLSSL
Trigger: GAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGT...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
3UTR GCA 72 bp TTGGTTCATTCACATAGATCTTACATGACTCAAGTCTaGACCTTGTACAGTTTCTGTTGCCCTCCTGCACTG +
Preference number: 3 (lower is better)
Translates to: LVHSHRSYMTQV*TLYSFCCPPAL
Trigger: CAGTGCAGGAGGGCAACAGAAACTGTACAAGGTGCAGACTTGAGTCATGTAAGATCTATGTGAATGAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
3UTR GCA 72 bp GAGTTCTTTAAGATTTGGACAAACGACTGGTTTCTATaGAACCACGCAGGTGAAGGGCATGTTCTATCTTGC +
Preference number: 3 (lower is better)
Translates to: EFFKIWTNDWFL*NHAGEGHVLSC
Trigger: GCAAGATAGAACATGCCCTTCACCTGCGTGGTTGCATAGAAACCAGTCGTTTGTCCAAATCTTAAAGAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CCA 72 bp TTTCCACTTGAGTTCTTTAAGATTTGGACAAACGACTaGTTTCTATGCAACCACGCAGGTGAAGGGCATGTT +
Preference number: 3 (lower is better)
Translates to: FPLEFFKIWTND*FLCNHAGEGHV
Trigger: AACATGCCCTTCACCTGCGTGGTTGCATAGAAACCAGTCGTTTGTCCAAATCTTAAAGAACTCAAGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR-3UTR CAA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCACGACAGTTGTCTGGTaGCAACTGCTATCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGTTVVW*QLLSSL
Trigger: GAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGT...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
3UTR GCA 72 bp GCTGTGAAAGGACAAAATTTACGACAGTTGTCTGGTTaGAACTGCTATCTTCTCTCTTCATTAGCATGTTCT +
Preference number: 3 (lower is better)
Translates to: AVKGQNLRQLSG*NCYLLSSLACS
Trigger: AGAACATGCTAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTCACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
3UTR GCA 72 bp GCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTaGAGCATACAGTGGTATATCAAGAATACTGTCTGG +
Preference number: 3 (lower is better)
Translates to: AMCFHLQSINIL*SIQWYIKNTVW
Trigger: CCAGACAGTATTCTTGATATACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 72 bp ATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTaGTTCCATCTGCAGTCAATAAATATACTGTGCAGC +
Preference number: 3 (lower is better)
Translates to: MFYLAAFHSLAM*FHLQSINILCS
Trigger: GCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCTAAGGAATGGAAAGCTGCAAGATAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR GCA 72 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTAGCATGTTCTAGAACA +
Preference number: 3 (lower is better)
Translates to: KGQNLRQLSGCN*YLLSSLACSRT
Trigger: TGTTCTAGAACATGCTAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
3UTR TCA 72 bp GTGCTGTTATTATTACTTGGTAATATTAATAGCGACTaGAGCAAGACTTCAGAGGTAAGATTTACTACTGAG +
Preference number: 3 (lower is better)
Translates to: VLLLLLGNINSD*SKTSEVRFTTE
Trigger: CTCAGTAGTAAATCTTACCTCTGAAGTCTTGCTTCAGTCGCTATTAATATTACCAAGTAATAATAACAGCAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR TCA 90 bp CAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCGCCCCAGCTGAGGTCTaGGGACAGTGGGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: QEYCLALGFSLGPQQRKSAPAEV*GQWVDV
Trigger: CACATCCACCCACTGTCCTCAGACCTCAGCTGGGGC...GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp CAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCTTGGCTCTCCTGCCTTaGGATCCCCAACCCACCCCC +
Preference number: 4 (lower is better)
Translates to: QEYCLALGFSLGPQQRKSLALLP*DPQPTP
Trigger: GGGGGTGGGTTGGGGATCCCAAGGCAGGAGAGCCAA...GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp ACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTGCGGGTGCAGCCCCAGCTaGGGTCTGAGGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: TQVKGMFYLAAFHSLAMCGCSPS*GLRTVG
Trigger: ACCCACTGTCCTCAGACCTCAGCTGGGGCTGCACCC...GCACATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp TGGACAAACGACTGGTTTCTATGCAACCACGCAGGTGAAGGGCATGTTCTATCTAGGTGGCCACTGAGCTaGCCTCTAGGCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: WTNDWFLCNHAGEGHVLSRWPLS*PLGLQA
Trigger: AGCCTGCAAGCCTAGAGGTCAGCTCAGTGGCCACCT...AGATAGAACATGCCCTTCACCTGCGTGGTTGCATAGAAACCAGTCGTTTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp CAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCGGAGGCACACTCCTGTaGGCACTTCCTCATACATAC +
Preference number: 4 (lower is better)
Translates to: QEYCLALGFSLGPQQRKSGGTLL*ALPHTY
Trigger: GTATGTATGAGGAAGTGCCCACAGGAGTGTGCCTCC...GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCAGGACGCTCCCTCCCTaGGAGGGAGACCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFRTLPP*EGDRQG
Trigger: GCCCTGCCGGTCTCCCTCCCAGGGAGGGAGCGTCCT...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR TCA 90 bp TGCTTTGCTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTCATACATACACTGGGTGGTTCCTTTTTaGATGTTGGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CFASSRRHTPVGTSSYIHWVVPF*MLEAQV
Trigger: CACCTGAGCCTCCAACATTCAAAAAGGAACCACCCA...GTGTATGTATGAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCGCAGAGACGGGAGCGTaGTGGTGCGGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVAETGA*WCGRPG
Trigger: GCCAGGGCGGCCGCACCATCACGCTCCCGTCTCTGC...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR GCA 90 bp TGCTTTGCTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTCATACATACACAACGACTGGTTTCTATaGAACCACGCAGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CFASSRRHTPVGTSSYIHNDWFL*NHAGEG
Trigger: CCCTTCACCTGCGTGGTTGCATAGAAACCAGTCGTT...GTGTATGTATGAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp GACTGGTTTCTATGCAACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTGGCAGCTTCCAATGGTaGCCTGGGCTTCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: DWFLCNHAGEGHVLSCSFGSFQW*PGLQKV
Trigger: CACCTTCTGAAGCCCAGGGCACCATTGGAAGCTGCC...AAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGTTGCATAGAAACCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp CAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCCCAAGCACCCTTGTATaGATTCCTCAGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QEYCLALGFSLGPQQRKSPSTLV*IPQEEG
Trigger: TCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTGG...GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp CAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCTCTGAGGACAGTGGGTaGATGTGGGGCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QAPLYAFLRKRDVVLSVFSEDSG*MWGREL
Trigger: CAGCTCCCTGCCCCACATCCACCCACTGTCCTCAGA...GAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp CAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCAATACTGTCTGGCCTTaGGGTTCAGTTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QEYCLALGFSLGPQQRKSNTVWP*GSVWVL
Trigger: GAGGACCCAAACTGAACCCCAAGGCCAGACAGTATT...GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp CAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCTTGTGCGCACCCCTCTaGGCCCTGGGCTTTGAAACT +
Preference number: 4 (lower is better)
Translates to: QAPLYAFLRKRDVVLSVFLCAPL*ALGFET
Trigger: AGTTTCAAAGCCCAGGGCTCAGAGGGGTGCGCACAA...GAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp ATCTCTGTTGCTTTGCTTCATCCCGGAGGCACACTCCTGTGGGCACTTCCTCATAAGAACACTCCCCCATaGAGACTCTGCATATCTCCA +
Preference number: 4 (lower is better)
Translates to: ISVALLHPGGTLLWALPHKNTPP*RLCISP
Trigger: TGGAGATATGCAGAGTCTTCATGGGGGAGTGTTCTT...ATGAGGAAGTGCCCACAGGAGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACGGCCCCTGGGCCAGGTaGCAGGACAACCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHGPWAR*QDNQGH
Trigger: ATGGCCTTGGTTGTCCTGGCACCTGGCCCAGGGGCC...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR TCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCTTGTGCGCACCCCTCTaGGCCCTGGGCTTTGAAACT +
Preference number: 4 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLALCAPL*ALGFET
Trigger: AGTTTCAAAGCCCAGGGCTCAGAGGGGTGCGCACAA...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR TCA 90 bp ACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGGGCTTGCAGGCTTCCTaGATTTCTCGTCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TTQVKGMFYLAAFHSLAMGLQAS*ISRQHF
Trigger: GAAGTGCTGACGAGAAATTCAGGAAGCCTGCAAGCC...CATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTGGCCCCTGGGCCAGGTaGCAGGACAACCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFIGPWAR*QDNQGH
Trigger: ATGGCCTTGGTTGTCCTGGCACCTGGCCCAGGGGCC...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp CAAGAATACTGTCTGGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCGGGCATGTTCTATCTTaGAGCTTTCCATTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QEYCLALGFSLGPQQRKSGHVLS*SFPFLS
Trigger: GCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCC...GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp ACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTGCGGATCTCTGTTGCTTTaGTTCATCCCGGAGGCACAC +
Preference number: 4 (lower is better)
Translates to: TQVKGMFYLAAFHSLAMCGSLLL*FIPEAH
Trigger: GTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCC...GCACATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACTCTGTCCTAGGCCCCTaGGCCAGGTGCCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHSVLGP*ARCQDN
Trigger: GTTGTCCTGGCACCTGGCCCAGGGGCCTAGGACAGA...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR CCA 90 bp TGCAGCCTCTCCTGCTTGGATCTCTGTTGCTTTGCTTCATCCCGGAGGCACACTATTTGGACAAACGACTaGTTTCTATGCAACCACGCA +
Preference number: 4 (lower is better)
Translates to: CSLSCLDLCCFASSRRHTIWTND*FLCNHA
Trigger: TGCGTGGTTGCATAGAAACCAGTCGTTTGTCCAAAT...AGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACGACCGGCAGGGCAGCTaGGAAGGGCAGAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHDRQGS*EGQRRE
Trigger: CTCCCGTCTCTGCCCTTCCCAGCTGCCCTGCCGGTC...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608868.2
3UTR CAA 72 bp CAGCATACAGTGGTATATCAAGAATACTGTCTGGCCTaGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QHTVVYQEYCLA*GFSLGPQQRKS
Trigger: GGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTGATATACCACTGTATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACGGCCCCTGGGCCAGGTaGCAGGACAACCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHGPWAR*QDNQGH
Trigger: ATGGCCTTGGTTGTCCTGGCACCTGGCCCAGGGGCC...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp GACTGGTTTCTATGCAACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCTGAGATCGCGCCATTaGACTCCAGCCAGAATATAC +
Preference number: 4 (lower is better)
Translates to: DWFLCNHAGEGHVLSCSFLRSRH*TPARIY
Trigger: GTATATTCTGGCTGGAGTGCAATGGCGCGATCTCAG...AAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGTTGCATAGAAACCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp ACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTTCCTCTTCCATCCGTaGCTCAAACTAGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TTQVKGMFYLAAFHSLAMFLFHP*LKLGSF
Trigger: GAAGCTGCCTAGTTTGAGGCACGGATGGAAGAGGAA...CATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCTTCACCGACTTGGGGTaGGGGTACAGGGAGTCCACG +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFFTDLG*GYREST
Trigger: CGTGGACTCCCTGTACCCGCACCCCAAGTCGGTGAA...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR CCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTTCTGTCCTAGGCCCCTaGGCCAGGTGCCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFISVLGP*ARCQDN
Trigger: GTTGTCCTGGCACCTGGCCCAGGGGCCTAGGACAGA...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTATCTGTCCTAGGCCCCTaGGCCAGGTGCCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLSVLGP*ARCQDN
Trigger: GTTGTCCTGGCACCTGGCCCAGGGGCCTAGGACAGA...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
3UTR CAA 72 bp TGTACAGTTTCTGTTGCCCTCCTGCACTGCAATCTCTaGACAGTTCACGCAACTAATAACTCCTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: CTVSVALLHCNL*TVHATNNSSAT
Trigger: GGTGGCAGAGGAGTTATTAGTTGCGTGAACTGTCAAGAGATTGCAGTGCAGGAGGGCAACAGAAACTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR TCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGATTGTGCGCACCCCTCTaGGCCCTGGGCTTTGAAACT +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARLCAPL*ALGFET
Trigger: AGTTTCAAAGCCCAGGGCTCAGAGGGGTGCGCACAA...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR GCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCGGCCCCTGGGCCAGGTaGCAGGACAACCAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGGPWAR*QDNQGH
Trigger: ATGGCCTTGGTTGTCCTGGCACCTGGCCCAGGGGCC...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTACAGCTTTGGCTCTCCTaGCTTGGGATCCCCAACCCA +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVQLWLS*LGIPNP
Trigger: TGGGTTGGGGATCCCAAGGCAGGAGAGCCAAAGCTG...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTACTTCCAATGGTGCCCTaGGCTTCAGAAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVLPMVP*ASEGGH
Trigger: GTGGCCACCTTCTGAAGCCCAGGGCACCATTGGAAG...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCAGGGAAATGGGCTCTGTaGGGCCAGAGAGCTTCACCG +
Preference number: 4 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSGKWAL*GQRASP
Trigger: CGGTGAAGCTCTCTGGCCCCACAGAGCCCATTTCCC...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR TCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCTGGGTGGTTCCTTTTTaGATGTTGGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLAWVVPF*MLEAQV
Trigger: CACCTGAGCCTCCAACATTCAAAAAGGAACCACCCA...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR CCA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACGCTTCTCACCTCCAGTaGGTACTGACCGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHASHLQ*VLTVGL
Trigger: TAGCCCTACGGTCAGTACCCACTGGAGGTGAGAAGC...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR CCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGAGCTTCTCACCTCCAGTaGGTACTGACCGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARASHLQ*VLTVGL
Trigger: TAGCCCTACGGTCAGTACCCACTGGAGGTGAGAAGC...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR CCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTTCTGTCCTAGGCCCCTaGGCCAGGTGCCAGGACAAC +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFSVLGP*ARCQDN
Trigger: GTTGTCCTGGCACCTGGCCCAGGGGCCTAGGACAGA...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CCA 90 bp CCCCCAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTCTGTGCAGCATACAGTaGTATATCAAGAATACTGTC +
Preference number: 4 (lower is better)
Translates to: PPSTLVCIPQEEGCCSQCLCSIQ*YIKNTV
Trigger: GACAGTATTCTTGATATACCACTGTATGCTGCACAG...ACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAGGTGAGTACGGGAAATaGGCTCTGTGGGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLGEYGK*ALWGQR
Trigger: TCTCTGGCCCCACAGAGCCCATTTCCCGTACTCACC...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR TCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTAAAGAAGAGCTTCCTCTaGCTCCAGCTTTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVKKSFL*LQLWLS
Trigger: GGAGAGCCAAAGCTGGAGTCAGAGGAAGCTCTTCTT...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTCTGGAGCCCGCAAGGTaGGTACGGGAAATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFLEPAR*VREMGS
Trigger: AGAGCCCATTTCCCGTACTCACCTTGCGGGCTCCAG...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR GCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACAACCAAGGCCATTCTaGTTCTCACCTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARQPRPF*FSPPVG
Trigger: ACCCACTGGAGGTGAGAAGCAGAATGGCCTTGGTTG...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR GCA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACCAACCAAGGCCATTCTaGTTCTCACCTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHQPRPF*FSPPVG
Trigger: ACCCACTGGAGGTGAGAAGCAGAATGGCCTTGGTTG...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR GCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCCCTGGCTGTGCAATCTaGCCCACTCTTATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLAPGCAI*PTLISS
Trigger: AGAAGAAATAAGAGTGGGGCAGATTGCACAGCCAGG...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608353.5
CDS-3UTR CCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTGCTTCTCACCTCCAGTaGGTACTGACCGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFIASHLQ*VLTVGL
Trigger: TAGCCCTACGGTCAGTACCCACTGGAGGTGAGAAGC...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTACCTTGGGGTTCAGTTTaGGTCCTCAGCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVPWGSV*VLSRGS
Trigger: ACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGG...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCAGAGCTTCACCGACTTaGGGTGCGGGTACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVRASPT*GAGTGS
Trigger: ACTCCCTGTACCCGCACCCCAAGTCGGTGAAGCTCT...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR CCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTACTTCTGTCCATCCTCTaGAGCCCGCAAGGTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLLLSIL*SPQGEY
Trigger: GTACTCACCTTGCGGGCTCCAGAGGATGGACAGAAG...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR TCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTTTGTGCGCACCCCTCTaGGCCCTGGGCTTTGAAACT +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFLCAPL*ALGFET
Trigger: AGTTTCAAAGCCCAGGGCTCAGAGGGGTGCGCACAA...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTAATGCAACCACGCAGGTaGAGGGCATGTTCTATCTTG +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVMQPRR*RACSIL
Trigger: CAAGATAGAACATGCCCTTCACCTGCGTGGTTGCAT...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR GCA 90 bp CGGGTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCCGACAGTTGTCTGGTTaGAACTGCTATCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVQNPCKKDLNSIRQNLARQLSG*NCYLLS
Trigger: AGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCG...GGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGACCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTACAACCAAGGCCATTCTaGTTCTCACCTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLQPRPF*FSPPVG
Trigger: ACCCACTGGAGGTGAGAAGCAGAATGGCCTTGGTTG...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGAGTTGCCCTCCTGCACTaGAATCTCTTGACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARVALLH*NLLTVH
Trigger: GTGAACTGTCAAGAGATTGCAGTGCAGGAGGGCAAC...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTATGCTTGGATCTCTGTTaGTTTGCTTCATCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVCLDLC*FASSRR
Trigger: CCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCA...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp ACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGCTCTTTCTCTTTGGGTaGTTCCTTTTTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: TTQVKGMFYLAAFHSLAMLFLFG*FLFECW
Trigger: CCAACATTCAAAAAGGAACCACCCAAAGAGAAAGAG...CATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448282.6
3UTR CAA 72 bp CATTCACATAGATCTTACATGACTCAAGTCTGCACCTaGTACAGTTTCTGTTGCCCTCCTGCACTGCAATCT +
Preference number: 4 (lower is better)
Translates to: HSHRSYMTQVCT*YSFCCPPALQS
Trigger: AGATTGCAGTGCAGGAGGGCAACAGAAACTGTACAAGGTGCAGACTTGAGTCATGTAAGATCTATGTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR TCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTTGGGTGGTTCCTTTTTaGATGTTGGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFIWVVPF*MLEAQV
Trigger: CACCTGAGCCTCCAACATTCAAAAAGGAACCACCCA...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR GCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACCAACCAAGGCCATTCTaGTTCTCACCTCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHQPRPF*FSPPVG
Trigger: ACCCACTGGAGGTGAGAAGCAGAATGGCCTTGGTTG...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAGTTGCCCTCCTGCACTaGAATCTCTTGACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLVALLH*NLLTVH
Trigger: GTGAACTGTCAAGAGATTGCAGTGCAGGAGGGCAAC...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTATGTTGCAGCCTCTCCTaGTTGGATCTCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVCCSLS*LDLCCF
Trigger: AAAGCAACAGAGATCCAAGCAGGAGAGGCTGCAACA...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTGCTTCTCACCTCCAGTaGGTACTGACCGTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFASHLQ*VLTVGL
Trigger: TAGCCCTACGGTCAGTACCCACTGGAGGTGAGAAGC...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCTTAATCAGGCACCCCTaGCTGTGCAATCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGLIRHP*LCNLPH
Trigger: GTGGGGCAGATTGCACAGCCAGGGGTGCCTGATTAA...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000608353.5
CDS-3UTR TCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTGGGTGGTTCCTTTTTaGATGTTGGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVWVVPF*MLEAQV
Trigger: CACCTGAGCCTCCAACATTCAAAAAGGAACCACCCA...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CCA 90 bp GAAAAGACATTGAAATTACAGGTTTCAGAAGAAGAGCTTCCTCTGACTCCAGCTATCAAGAATACTGTCTaGCCTTGGGGTTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: EKTLKLQVSEEELPLTPAIKNTV*PWGSVW
Trigger: CCAAACTGAACCCCAAGGCCAGACAGTATTCTTGAT...AGCTGGAGTCAGAGGAAGCTCTTCTTCTGAAACCTGTAATTTCAATGTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCTGGGTGGTTCCTTTTTaGATGTTGGAGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGWVVPF*MLEAQV
Trigger: CACCTGAGCCTCCAACATTCAAAAAGGAACCACCCA...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATATGCCACGCAAAGTaGAAGAGTTACCAATCCGAA +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFICHAK*KSYQSE
Trigger: TTCGGATTGGTAACTCTTTCACTTTGCGTGGCATAT...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGATCTGTGGAAAAAGAATaGGATAATGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARSVEKE*DNGCSC
Trigger: ACAGCTGCAGCCATTATCTCATTCTTTTTCCACAGA...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGATGCACTGCAATCTCTTaGCAGTTCACGCAACTAATA +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARCTAIS*QFTQLI
Trigger: TATTAGTTGCGTGAACTGTCAAGAGATTGCAGTGCA...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTAACTTTCACGACAGCTaGACCGGCATAATTCATCTT +
Preference number: 4 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTNFHDS*TGIIHL
Trigger: AAGATGAATTATGCCGGTGCAGCTGTCGTGAAAGTT...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCAACTTTCACGACAGCTaGACCGGCATAATTCATCTT +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFNFHDS*TGIIHL
Trigger: AAGATGAATTATGCCGGTGCAGCTGTCGTGAAAGTT...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTTTGTACAGTTTCTGTTaGCCTCCTGCACTGCAATCT +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFILYSFC*PPALQS
Trigger: AGATTGCAGTGCAGGAGGGCAACAGAAACTGTACAA...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp CAAGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCGAGTTCTTTAAGATTTaGACAAACGACTGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: QAPLYAFLRKRDVVLSVFEFFKI*TNDWFL
Trigger: TAGAAACCAGTCGTTTGTCCAAATCTTAAAGAACTC...GAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR TCA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCAATATGCCACGCAAAGTaGAAGAGTTACCAATCCGAA +
Preference number: 4 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSICHAK*KSYQSE
Trigger: TTCGGATTGGTAACTCTTTCACTTTGCGTGGCATAT...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTATATGCCACGCAAAGTaGAAGAGTTACCAATCCGAA +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFIICHAK*KSYQSE
Trigger: TTCGGATTGGTAACTCTTTCACTTTGCGTGGCATAT...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACCCTTATTTTAGTAGCTaGGTGGAAGGATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHPYFSS*VEGSFP
Trigger: TGGAAAAGATCCTTCCACTCAGCTACTAAAATAAGG...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATGCACTGCAATCTCTTaGCAGTTCACGCAACTAATA +
Preference number: 4 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSCTAIS*QFTQLI
Trigger: TATTAGTTGCGTGAACTGTCAAGAGATTGCAGTGCA...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR TCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTCACATAGATCTTACATaGCTCAAGTCTGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFIHIDLT*LKSAPC
Trigger: ACAAGGTGCAGACTTGAGTCATGTAAGATCTATGTG...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAACTTTCACGACAGCTaGACCGGCATAATTCATCTT +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFINFHDS*TGIIHL
Trigger: AAGATGAATTATGCCGGTGCAGCTGTCGTGAAAGTT...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTGTACAGTTTCTGTTaGCCTCCTGCACTGCAATCT +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVLYSFC*PPALQS
Trigger: AGATTGCAGTGCAGGAGGGCAACAGAAACTGTACAA...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACTTTTCACAGCTTTGTaGTTGACTGACTCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARLFTAL*LTDSSY
Trigger: GTAACTAGAGTCAGTCAAGCACAAAGCTGTGAAAAG...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTCTCTTTCTCTTTGGGTaGTTCCTTTTTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTLFLFG*FLFECW
Trigger: CCAACATTCAAAAAGGAACCACCCAAAGAGAAAGAG...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACTCTTTCTCTTTGGGTaGTTCCTTTTTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARLFLFG*FLFECW
Trigger: CCAACATTCAAAAAGGAACCACCCAAAGAGAAAGAG...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR CCA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTTTTACGACAGTTGTCTaGTTGCAACTGCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTFTTVV*LQLLSS
Trigger: AGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAA...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCTTTACGACAGTTGTCTaGTTGCAACTGCTATCTTCT +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFFTTVV*LQLLSS
Trigger: AGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAA...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACATATGCCACGCAAAGTaGAAGAGTTACCAATCCGAA +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHICHAK*KSYQSE
Trigger: TTCGGATTGGTAACTCTTTCACTTTGCGTGGCATAT...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACTCTGTGGAAAAAGAATaGGATAATGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHSVEKE*DNGCSC
Trigger: ACAGCTGCAGCCATTATCTCATTCTTTTTCCACAGA...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCATGCCAGGGAGAACATaGACATTTCCTTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVMPGRT*TFPLQV
Trigger: TACTTGCAAAGGAAATGTTCATGTTCTCCCTGGCAT...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACATGCCAGGGAGAACATaGACATTTCCTTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHMPGRT*TFPLQV
Trigger: TACTTGCAAAGGAAATGTTCATGTTCTCCCTGGCAT...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGAAATATTAATAGCGACTaGAGCAAGACTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARNINSD*SKTSEV
Trigger: TACCTCTGAAGTCTTGCTTCAGTCGCTATTAATATT...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR TCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCCACATAGATCTTACATaGCTCAAGTCTGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVHIDLT*LKSAPC
Trigger: ACAAGGTGCAGACTTGAGTCATGTAAGATCTATGTG...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR TCA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGATCAACAAAGAAAGGATaGAAACATCAACACATAGGC +
Preference number: 4 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARSTKKG*KHQHIG
Trigger: GCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGA...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCTTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFLSGCN*YLLSSL
Trigger: TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAA...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR GCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTACTTTTCACAGCTTTGTaGTTGACTGACTCTAGTTAC +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLLFTAL*LTDSSY
Trigger: GTAACTAGAGTCAGTCAAGCACAAAGCTGTGAAAAG...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATGACGCTCACTCTGTaGAAAAAGAATGAGATAATG +
Preference number: 4 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFMTLTL*KKNEIM
Trigger: CATTATCTCATTCTTTTTCCACAGAGTGAGCGTCAT...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTTCTGTGGAAAAAGAATaGGATAATGGCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFSVEKE*DNGCSC
Trigger: ACAGCTGCAGCCATTATCTCATTCTTTTTCCACAGA...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCATGCCAGGGAGAACATaGACATTTCCTTTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGMPGRT*TFPLQV
Trigger: TACTTGCAAAGGAAATGTTCATGTTCTCCCTGGCAT...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACCCTTATTTTAGTAGCTaGGTGGAAGGATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHPYFSS*VEGSFP
Trigger: TGGAAAAGATCCTTCCACTCAGCTACTAAAATAAGG...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCAAATATTAATAGCGACTaGAGCAAGACTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSNINSD*SKTSEV
Trigger: TACCTCTGAAGTCTTGCTTCAGTCGCTATTAATATT...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTATTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLLSGCN*YLLSSL
Trigger: TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAA...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR GCA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSLSGCN*YLLSSL
Trigger: TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAA...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR GCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTACATGACTCAAGTCTaGACCTTGTACAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVYMTQV*TLYSFC
Trigger: ACAGAAACTGTACAAGGTGCAGACTTGAGTCATGTA...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACCTCTTTCTCTTTGGGTaGTTCCTTTTTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHLFLFG*FLFECW
Trigger: CCAACATTCAAAAAGGAACCACCCAAAGAGAAAGAG...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAACTACTAATCCCATTTaGATGTTTTCCGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLTTNPI*MFSASY
Trigger: ATATGAGGCGGAAAACATCCAAATGGGATTAGTAGT...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CCA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTATGACGCTCACTCTGTaGAAAAAGAATGAGATAATG +
Preference number: 4 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFIMTLTL*KKNEIM
Trigger: CATTATCTCATTCTTTTTCCACAGAGTGAGCGTCAT...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR TCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCCCTTATTTTAGTAGCTaGGTGGAAGGATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGPYFSS*VEGSFP
Trigger: TGGAAAAGATCCTTCCACTCAGCTACTAAAATAAGG...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCAATATTAATAGCGACTaGAGCAAGACTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVNINSD*SKTSEV
Trigger: TACCTCTGAAGTCTTGCTTCAGTCGCTATTAATATT...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR GCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCTACATGACTCAAGTCTaGACCTTGTACAGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGYMTQV*TLYSFC
Trigger: ACAGAAACTGTACAAGGTGCAGACTTGAGTCATGTA...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCCTCTTTCTCTTTGGGTaGTTCCTTTTTGAATGTTGG +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGLFLFG*FLFECW
Trigger: CCAACATTCAAAAAGGAACCACCCAAAGAGAAAGAG...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CCA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACACTACTAATCCCATTTaGATGTTTTCCGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: LLSSLACSRTRNMILYTHTTNPI*MFSASY
Trigger: ATATGAGGCGGAAAACATCCAAATGGGATTAGTAGT...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CCA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCACTACTAATCCCATTTaGATGTTTTCCGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: SSLACSRTRNMILYTHKVTTNPI*MFSASY
Trigger: ATATGAGGCGGAAAACATCCAAATGGGATTAGTAGT...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CCA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAAACAAAAAGGCCTGCTaGCATATAAACTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLNKKAC*HINFKR
Trigger: TCTTTTGAAGTTTATATGCCAGCAGGCCTTTTTGTT...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCAATATTAATAGCGACTaGAGCAAGACTTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGNINSD*SKTSEV
Trigger: TACCTCTGAAGTCTTGCTTCAGTCGCTATTAATATT...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR TCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTTCAACAAAGAAAGGATaGAAACATCAACACATAGGC +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFSTKKG*KHQHIG
Trigger: GCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGA...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR GCA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTTTGTCTGGTTGCAACTaGTATCTTCTCTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: SLACSRTRNMILYTHKVFLSGCN*YLLSSL
Trigger: TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAA...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCATGACGCTCACTCTGTaGAAAAAGAATGAGATAATG +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGMTLTL*KKNEIM
Trigger: CATTATCTCATTCTTTTTCCACAGAGTGAGCGTCAT...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
3UTR CAA 72 bp TGTAGTCACTCTGTAAAAAGTATCATAGTCAGGTACTaGTTCCTAAAATTCAGTATGATTCTTTCCACACAC +
Preference number: 4 (lower is better)
Translates to: CSHSVKSIIVRY*FLKFSMILSTH
Trigger: GTGTGTGGAAAGAATCATACTGAATTTTAGGAACAAGTACCTGACTATGATACTTTTTACAGAGTGACTACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CCA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCAACAAAAAGGCCTGCTaGCATATAAACTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGNKKAC*HINFKR
Trigger: TCTTTTGAAGTTTATATGCCAGCAGGCCTTTTTGTT...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS CCA 90 bp TCCATCCTCTGGAGCCCGCAAGGTGAGTACGGGAAATGGGCTCTGTaGGGCCAGAGAGCTTCACCGACTTGGGGTGCGGGTACAGGGAGT +
Preference number: 5 (lower is better)
Translates to: SILWSPQGEYGKWAL*GQRASPTWGAGTGS
Trigger: ACTCCCTGTACCCGCACCCCAAGTCGGTGAAGCTCTCTGGCCCCACAGAGCCCATTTCCCGTACTCACCTTGCGGGCTCCAGAGGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS-3UTR CAA 90 bp TGCAGCCTCTCCTGCTTGGATCTCTGTTGCTTTGCTTCATCCCGGAGGCACACTGCTGAGATCGCGCCATaGCACTCCAGCCAGAATATA +
Preference number: 5 (lower is better)
Translates to: CSLSCLDLCCFASSRRHTAEIAP*HSSQNI
Trigger: TATATTCTGGCTGGAGTGCAATGGCGCGATCTCAGC...AGTGTGCCTCCGGGATGAAGCAAAGCAACAGAGATCCAAGCAGGAGAGGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS CCA 90 bp TCTAGGCTGTTTACCTCGGCCTATTCCTGCTACCCTATGCCTGCTTaGCTACAGCACAGCCATGTTCCTTACACTCTCCAAACCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SRLFTSAYSCYPMPA*LQHSHVPYTLQTCP
Trigger: GGGACAGGTTTGGAGAGTGTAAGGAACATGGCTGTGCTGTAGCCAAGCAGGCATAGGGTAGCAGGAATAGGCCGAGGTAAACAGCCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS TCA 90 bp TGTGGGGCAGGGAGCTGGAAGAACACTGGAGAGACAGCAGGTAAATaGGACATGGCTTTATTCAGCAGCCCCTTCACAGGGTCAGTGTTA +
Preference number: 5 (lower is better)
Translates to: CGAGSWKNTGETAGK*DMALFSSPFTGSVL
Trigger: TAACACTGACCCTGTGAAGGGGCTGCTGAATAAAGCCATGTCTCATTTACCTGCTGTCTCTCCAGTGTTCTTCCAGCTCCCTGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS TCA 90 bp GATTTATTATCTTTTTCTTCTGTCCATCCTCTGGAGCCCGCAAGGTaGGTACGGGAAATGGGCTCTGTGGGGCCAGAGAGCTTCACCGAC +
Preference number: 5 (lower is better)
Translates to: DLLSFSSVHPLEPAR*VREMGSVGPESFTD
Trigger: GTCGGTGAAGCTCTCTGGCCCCACAGAGCCCATTTCCCGTACTCACCTTGCGGGCTCCAGAGGATGGACAGAAGAAAAAGATAATAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS GCA 90 bp TATTACTGCCTGTGTACTGCCCTTTCTGCAGACCACAGAAGGCCCTaGAGAAGAAAATTCAGTCCTCCTCAATGGGATGCAAGACCCTCC +
Preference number: 5 (lower is better)
Translates to: YYCLCTALSADHRRP*RRKFSPPQWDARPS
Trigger: GGAGGGTCTTGCATCCCATTGAGGAGGACTGAATTTTCTTCTGCAGGGCCTTCTGTGGTCTGCAGAAAGGGCAGTACACAGGCAGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS-3UTR CAA 90 bp AGCACCCTTGTATGCATTCCTCAGGAAGAGGGATGTTGTTCTCAGTGTTTTCCTCCTCTGACTCCAGCTTaGGCTCTCCTGCCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: STLVCIPQEEGCCSQCFPPLTPA*ALLPWD
Trigger: ATCCCAAGGCAGGAGAGCCAAAGCTGGAGTCAGAGG...AGGAAAACACTGAGAACAACATCCCTCTTCCTGAGGAATGCATACAAGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS TCA 90 bp TATTCAGAGAAGCCTTTCCAGCCAAGCCTCCCACTCTTGTGCAAGTaGTCACTTCCTCATTTGGACGCCCATTGCACTCTCTGCAGACTT +
Preference number: 5 (lower is better)
Translates to: YSEKPFQPSLPLLCK*SLPHLDAHCTLCRL
Trigger: AAGTCTGCAGAGAGTGCAATGGGCGTCCAAATGAGGAAGTGATCACTTGCACAAGAGTGGGAGGCTTGGCTGGAAAGGCTTCTCTGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS GCA 90 bp CAAACACTAGTGGCTGAGAGCCAGGTGGGGAGCTGCTCTATGTTATaGCTACATGGCTGTGACTATATAAGACACAGGACTGTGCACTTG +
Preference number: 5 (lower is better)
Translates to: QTLVAESQVGSCSML*LHGCDYIRHRTVHL
Trigger: CAAGTGCACAGTCCTGTGTCTTATATAGTCACAGCCATGTAGGCATAACATAGAGCAGCTCCCCACCTGGCTCTCAGCCACTAGTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 90 bp GCAGACCACAGAAGGCCCTGCAGAAGAAAATTCAGTCCTCCTCAATaGGATGCAAGACCCTCCTGCAACTGGCCTCTGTTTATCTCTAAA +
Preference number: 5 (lower is better)
Translates to: ADHRRPCRRKFSPPQ*DARPSCNWPLFISK
Trigger: TTTAGAGATAAACAGAGGCCAGTTGCAGGAGGGTCTTGCATCCCATTGAGGAGGACTGAATTTTCTTCTGCAGGGCCTTCTGTGGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS-3UTR CAA 90 bp AGCAATGTGCTTCCATCTGCAGTCAATAAATATACTGTGCAGCATACAGTGGTATTTGGCTCTCCTGCCTaGGGATCCCCAACCCACCCC +
Preference number: 5 (lower is better)
Translates to: SNVLPSAVNKYTVQHTVVFGSPA*GSPTHP
Trigger: GGGGTGGGTTGGGGATCCCAAGGCAGGAGAGCCAAA...TACCACTGTATGCTGCACAGTATATTTATTGACTGCAGATGGAAGCACATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CAA 90 bp ACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTGCGAATACTGTCTGGCCTaGGGGTTCAGTTTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: TQVKGMFYLAAFHSLAMCEYCLA*GFSLGP
Trigger: AGGACCCAAACTGAACCCCAAGGCCAGACAGTATTC...GCACATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS TCA 90 bp CACAGGGTCAGTGTTACATTTATACACTACACAAACACTAGTGGCTaGGAGCCAGGTGGGGAGCTGCTCTATGTTATGCCTACATGGCTG +
Preference number: 5 (lower is better)
Translates to: HRVSVTFIHYTNTSG*EPGGELLYVMPTWL
Trigger: CAGCCATGTAGGCATAACATAGAGCAGCTCCCCACCTGGCTCTCAGCCACTAGTGTTTGTGTAGTGTATAAATGTAACACTGACCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS GCA 90 bp CCACAGGCAAAGCTGATAATATTACTGCCTGTGTACTGCCCTTTCTaGAGACCACAGAAGGCCCTGCAGAAGAAAATTCAGTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PQAKLIILLPVYCPF*RPQKALQKKIQSSS
Trigger: TGAGGAGGACTGAATTTTCTTCTGCAGGGCCTTCTGTGGTCTGCAGAAAGGGCAGTACACAGGCAGTAATATTATCAGCTTTGCCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS-3UTR CAA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAGAGAGCTTCACCGACTaGGGGTGCGGGTACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLESFTD*GCGYRE
Trigger: CTCCCTGTACCCGCACCCCAAGTCGGTGAAGCTCTC...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS TCA 90 bp CAAACCTGTCCCACTCTCTGCATTCTTTATGGGATGAATTGGCATTaGTTTAATAGCTGGCTCAAACCTGATCCCACTTCCCCCACTCCC +
Preference number: 5 (lower is better)
Translates to: QTCPTLCILYGMNWH*FNSWLKPDPTSPTP
Trigger: GGGAGTGGGGGAAGTGGGATCAGGTTTGAGCCAGCTATTAAATCAATGCCAATTCATCCCATAAAGAATGCAGAGAGTGGGACAGGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS GCA 90 bp TGCTCTCACTCAGGCAGGTTATGGGAATCTCCTAACTGTATTATCTaGTTCCAGGCTGGGGCACTCCCACAGGCAAAGCTGATAATATTA +
Preference number: 5 (lower is better)
Translates to: CSHSGRLWESPNCII*FQAGALPQAKLIIL
Trigger: TAATATTATCAGCTTTGCCTGTGGGAGTGCCCCAGCCTGGAAGCAGATAATACAGTTAGGAGATTCCCATAACCTGCCTGAGTGAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS-3UTR CAA 90 bp ACCACGCAGGTGAAGGGCATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTTGGGTGGTTCCTTTTaGAATGTTGGAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: TTQVKGMFYLAAFHSLAMLGGSF*NVGGSG
Trigger: ACCTGAGCCTCCAACATTCAAAAAGGAACCACCCAA...CATTGCTAAGGAATGGAAAGCTGCAAGATAGAACATGCCCTTCACCTGCGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS GCA 90 bp TTATACACTACACAAACACTAGTGGCTGAGAGCCAGGTGGGGAGCTaGTCTATGTTATGCCTACATGGCTGTGACTATATAAGACACAGG +
Preference number: 5 (lower is better)
Translates to: LYTTQTLVAESQVGS*SMLCLHGCDYIRHR
Trigger: CCTGTGTCTTATATAGTCACAGCCATGTAGGCATAACATAGAGCAGCTCCCCACCTGGCTCTCAGCCACTAGTGTTTGTGTAGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 90 bp ATACTGTGCAGCATACAGTGGTATATCAAGAATACTGTCTGGCCTTaGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCTTTATGGTCT +
Preference number: 5 (lower is better)
Translates to: ILCSIQWYIKNTVWP*GSVWVLSRGSPLWS
Trigger: AGACCATAAAGGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTGATATACCACTGTATGCTGCACAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CAA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTCTTGTACAGTTTCTGTaGCCCTCCTGCACTGCAATC +
Preference number: 5 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTLVQFL*PSCTAI
Trigger: GATTGCAGTGCAGGAGGGCAACAGAAACTGTACAAG...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS TCA 90 bp ACCCCTACTGCACCTGAACTCAAATTTTCAAATGATCCGCACCTTTaGGCATACTGTGCTTTAGCTGAGGCAACCTCCTTTAATTGGATT +
Preference number: 5 (lower is better)
Translates to: TPTAPELKFSNDPHL*AYCALAEATSFNWI
Trigger: AATCCAATTAAAGGAGGTTGCCTCAGCTAAAGCACAGTATGCTCAAAGGTGCGGATCATTTGAAAATTTGAGTTCAGGTGCAGTAGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS TCA 90 bp CTTACACTCTCCAAACCTGTCCCACTCTCTGCATTCTTTATGGGATaGATTGGCATTGATTTAATAGCTGGCTCAAACCTGATCCCACTT +
Preference number: 5 (lower is better)
Translates to: LTLSKPVPLSAFFMG*IGIDLIAGSNLIPL
Trigger: AAGTGGGATCAGGTTTGAGCCAGCTATTAAATCAATGCCAATTCATCCCATAAAGAATGCAGAGAGTGGGACAGGTTTGGAGAGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 90 bp ATAAATATACTGTGCAGCATACAGTGGTATATCAAGAATACTGTCTaGCCTTGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: INILCSIQWYIKNTV*PWGSVWVLSRGSPL
Trigger: TAAAGGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTGATATACCACTGTATGCTGCACAGTATATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS-3UTR CAA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTTTGGGTGGTTCCTTTTaGAATGTTGGAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTLGGSF*NVGGSG
Trigger: ACCTGAGCCTCCAACATTCAAAAAGGAACCACCCAA...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGATTGGGTGGTTCCTTTTaGAATGTTGGAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARLGGSF*NVGGSG
Trigger: ACCTGAGCCTCCAACATTCAAAAAGGAACCACCCAA...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608525.5
CDS-3UTR CAA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCACTTGTACAGTTTCTGTaGCCCTCCTGCACTGCAATC +
Preference number: 5 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSLVQFL*PSCTAI
Trigger: GATTGCAGTGCAGGAGGGCAACAGAAACTGTACAAG...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTACTCAAGTCTGCACCTaGTACAGTTTCTGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTTQVCT*YSFCCP
Trigger: AGGGCAACAGAAACTGTACAAGGTGCAGACTTGAGT...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS GCA 90 bp ACCCAGCCCGAATTAATTCTTTCTGAATCAACTTCTGGTTGTGGCTaGTATCTTAGTTTCACCTCCATCATTGGTTTGGACTGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: TQPELILSESTSGCG*YLSFTSIIGLDCCS
Trigger: AGAACAACAGTCCAAACCAATGATGGAGGTGAAACTAAGATAGCAGCCACAACCAGAAGTTGATTCAGAAAGAATTAATTCGGGCTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS-3UTR CAA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTGGGTGGTTCCTTTTaGAATGTTGGAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSLGGSF*NVGGSG
Trigger: ACCTGAGCCTCCAACATTCAAAAAGGAACCACCCAA...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CAA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTACGACAGTTGTCTGGTaGCAACTGCTATCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFITTVVW*QLLSSL
Trigger: GAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGT...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CAA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTAACGACAGTTGTCTGGTaGCAACTGCTATCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLTTVVW*QLLSSL
Trigger: GAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGT...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CAA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACTGCACTGCAATCTCTaGACAGTTCACGCAACTAAT +
Preference number: 5 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARLHCNL*TVHATN
Trigger: ATTAGTTGCGTGAACTGTCAAGAGATTGCAGTGCAG...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp AAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCAACTCAAGTCTGCACCTaGTACAGTTTCTGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: KGQNLRQLSGCNCYLLSSTQVCT*YSFCCP
Trigger: AGGGCAACAGAAACTGTACAAGGTGCAGACTTGAGT...TGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS GCA 90 bp TGTGCCACTGATTCTTGTGTCTGTATATTCATGCCCCACAACTACTaGTTCCATTTCTATTGGTCTATAGTGAAAAGGCTAGTGCTCTAT +
Preference number: 5 (lower is better)
Translates to: CATDSCVCIFMPHNY*FHFYWSIVKRLVLY
Trigger: ATAGAGCACTAGCCTTTTCACTATAGACCAATAGAAATGGAAGCAGTAGTTGTGGGGCATGAATATACAGACACAAGAATCAGTGGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS-3UTR CAA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACTTGGGTGGTTCCTTTTaGAATGTTGGAGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LLSSLACSRTRNMILYTHLGGSF*NVGGSG
Trigger: ACCTGAGCCTCCAACATTCAAAAAGGAACCACCCAA...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CAA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACCTACTTTTCACAGCTTaGTGCTTGACTGACTCTAGT +
Preference number: 5 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHLLFTA*CLTDSS
Trigger: ACTAGAGTCAGTCAAGCACAAAGCTGTGAAAAGTAG...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp CAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACACCAAAATTTACGACAGTaGTCTGGTTGCAACTGCTAT +
Preference number: 5 (lower is better)
Translates to: QNPCKKDLNSIRQNLARHQNLRQ*SGCNCY
Trigger: ATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTG...GTGTCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CAA 90 bp GAAAGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCCAAAATTTACGACAGTaGTCTGGTTGCAACTGCTAT +
Preference number: 5 (lower is better)
Translates to: ERTKFTTVVWLQLLSSLFQNLRQ*SGCNCY
Trigger: ATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTG...GAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
ENST00000608868.2
CDS-3UTR CAA 90 bp GTCCAGAACCCTTGTAAGAAAGATTTGAATTCTATAAGGCAGAATCTGGCCAGACAAAATTTACGACAGTaGTCTGGTTGCAACTGCTAT +
Preference number: 5 (lower is better)
Translates to: VQNPCKKDLNSIRQNLARQNLRQ*SGCNCY
Trigger: ATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTG...TCTGGCCAGATTCTGCCTTATAGAATTCAAATCTTTCTTACAAGGGTTCTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CAA 90 bp AGGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTCTACTTTTCACAGCTTaGTGCTTGACTGACTCTAGT +
Preference number: 5 (lower is better)
Translates to: RTKFTTVVWLQLLSSLFILLFTA*CLTDSS
Trigger: ACTAGAGTCAGTCAAGCACAAAGCTGTGAAAAGTAG...AATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp TTCAACAAAGAAAGGATGAAAACATCAACACATAGGCAGGCAGCTGTTGACACTCACTATAAAAACTACTaGTCAGAGCCAACTCAGTTT +
Preference number: 5 (lower is better)
Translates to: FNKERMKTSTHRQAAVDTHYKNY*SEPTQF
Trigger: AAACTGAGTTGGCTCTGACAAGTAGTTTTTATAGTG...AGTGTCAACAGCTGCCTGCCTATGTGTTGATGTTTTCATCCTTTCTTTGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp TCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCTTTCTGCACTGCAATCTCTaGACAGTTCACGCAACTAAT +
Preference number: 5 (lower is better)
Translates to: SLACSRTRNMILYTHKVFLHCNL*TVHATN
Trigger: ATTAGTTGCGTGAACTGTCAAGAGATTGCAGTGCAG...AAAGACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp GGACAAAATTTACGACAGTTGTCTGGTTGCAACTGCTATCTTCTCTCTTCATTATTCACAGCTTTGTGCTaGACTGACTCTAGTTACTTT +
Preference number: 5 (lower is better)
Translates to: GQNLRQLSGCNCYLLSSLFTALC*TDSSYF
Trigger: AAAGTAACTAGAGTCAGTCAAGCACAAAGCTGTGAA...TAATGAAGAGAGAAGATAGCAGTTGCAACCAGACAACTGTCGTAAATTTTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp CTTCTCTCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACTTCACAGCTTTGTGCTaGACTGACTCTAGTTACTTT +
Preference number: 5 (lower is better)
Translates to: LLSSLACSRTRNMILYTHFTALC*TDSSYF
Trigger: AAAGTAACTAGAGTCAGTCAAGCACAAAGCTGTGAA...GTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGAGAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229570.9
ENST00000392863.6
CDS-3UTR CAA 90 bp TCTTCATTAGCATGTTCTAGAACAAGAAACATGATACTGTACACTCACAAGGTCCACTATAAAAACTACTaGTCAGAGCCAACTCAGTTT +
Preference number: 5 (lower is better)
Translates to: SSLACSRTRNMILYTHKVHYKNY*SEPTQF
Trigger: AAACTGAGTTGGCTCTGACAAGTAGTTTTTATAGTG...GACCTTGTGAGTGTACAGTATCATGTTTCTTGTTCTAGAACATGCTAATGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000608353.5
CDS-3UTR CAA 90 bp TGTCAGAGCCAACTCAGTTTCTCATATCTCATATTTTTAATATTGACTTCAGGCGGGTATTTGCTTCATTaGTTTCTCTCTGGTAAAATG +
Preference number: 5 (lower is better)
Translates to: CQSQLSFSYLIFLILTSGGYLLH*FLSGKM
Trigger: CATTTTACCAGAGAGAAACAAATGAAGCAAATACCC...GCCTGAAGTCAATATTAAAAATATGAGATATGAGAAACTGAGTTGGCTCTGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608353.5
CDS CCA 72 bp TGGAGCCCGCAAGGTGAGTACGGGAAATGGGCTCTGTaGGGCCAGAGAGCTTCACCGACTTGGGGTGCGGGT +
Preference number: 6 (lower is better)
Translates to: WSPQGEYGKWAL*GQRASPTWGAG
Trigger: ACCCGCACCCCAAGTCGGTGAAGCTCTCTGGCCCCACAGAGCCCATTTCCCGTACTCACCTTGCGGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS GCA 72 bp CCCAAACTGGAGTTCAGTGGAAGGACCTCAGCTCACTaGAACCTCCCCTGCCTGAACTCAAGCCATCCTCCC +
Preference number: 6 (lower is better)
Translates to: PKLEFSGRTSAH*NLPCLNSSHPP
Trigger: GGGAGGATGGCTTGAGTTCAGGCAGGGGAGGTTGCAGTGAGCTGAGGTCCTTCCACTGAACTCCAGTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS TCA 72 bp AAGCCTTTCCAGCCAAGCCTCCCACTCTTGTGCAAGTaGTCACTTCCTCATTTGGACGCCCATTGCACTCTC +
Preference number: 6 (lower is better)
Translates to: KPFQPSLPLLCK*SLPHLDAHCTL
Trigger: GAGAGTGCAATGGGCGTCCAAATGAGGAAGTGATCACTTGCACAAGAGTGGGAGGCTTGGCTGGAAAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS TCA 72 bp GGGAGCTGGAAGAACACTGGAGAGACAGCAGGTAAATaGGACATGGCTTTATTCAGCAGCCCCTTCACAGGG +
Preference number: 6 (lower is better)
Translates to: GSWKNTGETAGK*DMALFSSPFTG
Trigger: CCCTGTGAAGGGGCTGCTGAATAAAGCCATGTCTCATTTACCTGCTGTCTCTCCAGTGTTCTTCCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CAA 72 bp GTTTACCTCGGCCTATTCCTGCTACCCTATGCCTGCTaGGCTACAGCACAGCCATGTTCCTTACACTCTCCA +
Preference number: 6 (lower is better)
Translates to: VYLGLFLLPYAC*ATAQPCSLHSP
Trigger: TGGAGAGTGTAAGGAACATGGCTGTGCTGTAGCCAAGCAGGCATAGGGTAGCAGGAATAGGCCGAGGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS TCA 72 bp TCACAGCACGAAATAAGGTTGTTGTGCGCACCCCTCTaGGCCCTGGGCTTTGAAACTCTTTCTCTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: SQHEIRLLCAPL*ALGFETLSLWV
Trigger: CACCCAAAGAGAAAGAGTTTCAAAGCCCAGGGCTCAGAGGGGTGCGCACAACAACCTTATTTCGTGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229570.9
ENST00000392863.6
ENST00000448282.6
ENST00000608353.5
ENST00000608525.5
ENST00000608868.2
CDS TCA 72 bp GGTGGGGAGCTGCTCTATGTTATGCCTACATGGCTGTaGCTATATAAGACACAGGACTGTGCACTTGCACCC +
Preference number: 6 (lower is better)
Translates to: GGELLYVMPTWL*LYKTQDCALAP
Trigger: GGGTGCAAGTGCACAGTCCTGTGTCTTATATAGTCACAGCCATGTAGGCATAACATAGAGCAGCTCCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS GCA 72 bp GCCCTGCAGAAGAAAATTCAGTCCTCCTCAATGGGATaGAAGACCCTCCTGCAACTGGCCTCTGTTTATCTC +
Preference number: 6 (lower is better)
Translates to: ALQKKIQSSSMG*KTLLQLASVYL
Trigger: GAGATAAACAGAGGCCAGTTGCAGGAGGGTCTTGCATCCCATTGAGGAGGACTGAATTTTCTTCTGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS GCA 72 bp GTGGCTGAGAGCCAGGTGGGGAGCTGCTCTATGTTATaGCTACATGGCTGTGACTATATAAGACACAGGACT +
Preference number: 6 (lower is better)
Translates to: VAESQVGSCSML*LHGCDYIRHRT
Trigger: AGTCCTGTGTCTTATATAGTCACAGCCATGTAGGCATAACATAGAGCAGCTCCCCACCTGGCTCTCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 72 bp AGAAGGCCCTGCAGAAGAAAATTCAGTCCTCCTCAATaGGATGCAAGACCCTCCTGCAACTGGCCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: RRPCRRKFSPPQ*DARPSCNWPLF
Trigger: AAACAGAGGCCAGTTGCAGGAGGGTCTTGCATCCCATTGAGGAGGACTGAATTTTCTTCTGCAGGGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 72 bp TTTACCTCGGCCTATTCCTGCTACCCTATGCCTGCTTaGCTACAGCACAGCCATGTTCCTTACACTCTCCAA +
Preference number: 6 (lower is better)
Translates to: FTSAYSCYPMPA*LQHSHVPYTLQ
Trigger: TTGGAGAGTGTAAGGAACATGGCTGTGCTGTAGCCAAGCAGGCATAGGGTAGCAGGAATAGGCCGAGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 72 bp GGAAGAACACTGGAGAGACAGCAGGTAAATGAGACATaGCTTTATTCAGCAGCCCCTTCACAGGGTCAGTGT +
Preference number: 6 (lower is better)
Translates to: GRTLERQQVNET*LYSAAPSQGQC
Trigger: ACACTGACCCTGTGAAGGGGCTGCTGAATAAAGCCATGTCTCATTTACCTGCTGTCTCTCCAGTGTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS GCA 72 bp ACACAAACACTAGTGGCTGAGAGCCAGGTGGGGAGCTaGTCTATGTTATGCCTACATGGCTGTGACTATATA +
Preference number: 6 (lower is better)
Translates to: TQTLVAESQVGS*SMLCLHGCDYI
Trigger: TATATAGTCACAGCCATGTAGGCATAACATAGAGCAGCTCCCCACCTGGCTCTCAGCCACTAGTGTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CCA 72 bp AGTCCTCCTCAATGGGATGCAAGACCCTCCTGCAACTaGCCTCTGTTTATCTCTAAACCTGCACTGTTCAAT +
Preference number: 6 (lower is better)
Translates to: SPPQWDARPSCN*PLFISKPALFN
Trigger: ATTGAACAGTGCAGGTTTAGAGATAAACAGAGGCCAGTTGCAGGAGGGTCTTGCATCCCATTGAGGAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CAA 90 bp TATACTGTGCAGCATACAGTGGTATATCAAGAATACTGTCTGGCCTaGGGGTTCAGTTTGGGTCCTCAGCAGAGGAAGTCCTTTATGGTC +
Preference number: 6 (lower is better)
Translates to: YTVQHTVVYQEYCLA*GFSLGPQQRKSFMV
Trigger: GACCATAAAGGACTTCCTCTGCTGAGGACCCAAACTGAACCCCAAGGCCAGACAGTATTCTTGATATACCACTGTATGCTGCACAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448282.6
CDS CCA 72 bp GTGGCTGCTATCTTAGTTTCACCTCCATCATTGGTTTaGACTGTTGTTCTGGGTTCTGTGCTTCAGCAATCC +
Preference number: 6 (lower is better)
Translates to: VAAILVSPPSLV*TVVLGSVLQQS
Trigger: GGATTGCTGAAGCACAGAACCCAGAACAACAGTCCAAACCAATGATGGAGGTGAAACTAAGATAGCAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS CAA 72 bp CTGGTTGTGGCTGCTATCTTAGTTTCACCTCCATCATaGGTTTGGACTGTTGTTCTGGGTTCTGTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: LVVAAILVSPPS*VWTVVLGSVLQ
Trigger: CTGAAGCACAGAACCCAGAACAACAGTCCAAACCAATGATGGAGGTGAAACTAAGATAGCAGCCACAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS CAA 90 bp ACTTCTGGTTGTGGCTGCTATCTTAGTTTCACCTCCATCATTGGTTaGGACTGTTGTTCTGGGTTCTGTGCTTCAGCAATCCTGATATCC +
Preference number: 6 (lower is better)
Translates to: TSGCGCYLSFTSIIG*DCCSGFCASAILIS
Trigger: GGATATCAGGATTGCTGAAGCACAGAACCCAGAACAACAGTCCAAACCAATGATGGAGGTGAAACTAAGATAGCAGCCACAACCAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS TCA 72 bp AGTGTTACATTTATACACTACACAAACACTAGTGGCTaGGAGCCAGGTGGGGAGCTGCTCTATGTTATGCCT +
Preference number: 6 (lower is better)
Translates to: SVTFIHYTNTSG*EPGGELLYVMP
Trigger: AGGCATAACATAGAGCAGCTCCCCACCTGGCTCTCAGCCACTAGTGTTTGTGTAGTGTATAAATGTAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CAA 72 bp TGTGGCTGCTATCTTAGTTTCACCTCCATCATTGGTTaGGACTGTTGTTCTGGGTTCTGTGCTTCAGCAATC +
Preference number: 6 (lower is better)
Translates to: CGCYLSFTSIIG*DCCSGFCASAI
Trigger: GATTGCTGAAGCACAGAACCCAGAACAACAGTCCAAACCAATGATGGAGGTGAAACTAAGATAGCAGCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS TCA 72 bp GCACCTGAACTCAAATTTTCAAATGATCCGCACCTTTaGGCATACTGTGCTTTAGCTGAGGCAACCTCCTTT +
Preference number: 6 (lower is better)
Translates to: APELKFSNDPHL*AYCALAEATSF
Trigger: AAAGGAGGTTGCCTCAGCTAAAGCACAGTATGCTCAAAGGTGCGGATCATTTGAAAATTTGAGTTCAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS TCA 72 bp AGGTACACTGCTGAGCTTTCTACTGAATCCATGTCATaGCCCTGTGGACCAGGTGCAATTATTATCCTCATT +
Preference number: 6 (lower is better)
Translates to: RYTAELSTESMS*PCGPGAIIILI
Trigger: AATGAGGATAATAATTGCACCTGGTCCACAGGGTCATGACATGGATTCAGTAGAAAGCTCAGCAGTGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS GCA 72 bp CCTACCTTGAATGTGCTCAGAACACTTCCATTAGCCTaGAGTTGGGCAAAATCCTCTAACACAAAGCCTATT +
Preference number: 6 (lower is better)
Translates to: PTLNVLRTLPLA*SWAKSSNTKPI
Trigger: AATAGGCTTTGTGTTAGAGGATTTTGCCCAACTGCAGGCTAATGGAAGTGTTCTGAGCACATTCAAGGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS TCA 72 bp TCCAAACCTGTCCCACTCTCTGCATTCTTTATGGGATaGATTGGCATTGATTTAATAGCTGGCTCAAACCTG +
Preference number: 6 (lower is better)
Translates to: SKPVPLSAFFMG*IGIDLIAGSNL
Trigger: CAGGTTTGAGCCAGCTATTAAATCAATGCCAATTCATCCCATAAAGAATGCAGAGAGTGGGACAGGTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CAA 72 bp AGTTGTACTGGCCAAATGTGGCTAGAGGCTACCGTATaGGACAGTGACAATATAGAACATTTCCATCATTGT +
Preference number: 6 (lower is better)
Translates to: SCTGQMWLEATV*DSDNIEHFHHC
Trigger: ACAATGATGGAAATGTTCTATATTGTCACTGTCCAATACGGTAGCCTCTAGCCACATTTGGCCAGTACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369570.4
CDS CAA 90 bp GGTGGTTCCTTTTTGAATGTTGGAGGCTCAGGTGCTGAAGACATCTaGATCAATGATGATTTATTATCTTTTTCTTCTGTCCATCCTCTG +
Preference number: 6 (lower is better)
Translates to: GGSFLNVGGSGAEDI*INDDLLSFSSVHPL
Trigger: CAGAGGATGGACAGAAGAAAAAGATAATAAATCATCATTGATCAAGATGTCTTCAGCACCTGAGCCTCCAACATTCAAAAAGGAACCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608868.2
CDS GCA 72 bp ATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTaGTTCCATCTGCAGTCAATAAATATACTTTCGCGG +
Preference number: 6 (lower is better)
Translates to: MFYLAAFHSLAM*FHLQSINILSR
Trigger: CCGCGAAAGTATATTTATTGACTGCAGATGGAAGCACATTGCTAAGGAATGGAAAGCTGCAAGATAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369572.3
CDS GCA 72 bp ATGTTCTATCTTGCAGCTTTCCATTCCTTAGCAATGTaGTTCCATCTGCAGTCAATAAATATACTCCACAGG +
Preference number: 6 (lower is better)
Translates to: MFYLAAFHSLAM*FHLQSINILHR
Trigger: CCTGTGGAGTATATTTATTGACTGCAGATGGAAGCACATTGCTAAGGAATGGAAAGCTGCAAGATAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS GCA 72 bp GAATTAATTCTTTCTGAATCAACTTCTGGTTGTGGCTaGTATCTTAGTTTCACCTCCATCATTGGTTTGGAC +
Preference number: 6 (lower is better)
Translates to: ELILSESTSGCG*YLSFTSIIGLD
Trigger: GTCCAAACCAATGATGGAGGTGAAACTAAGATAGCAGCCACAACCAGAAGTTGATTCAGAAAGAATTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS GCA 72 bp GATTCTTGTGTCTGTATATTCATGCCCCACAACTACTaGTTCCATTTCTATTGGTCTATAGTGAAAAGGCTA +
Preference number: 6 (lower is better)
Translates to: DSCVCIFMPHNY*FHFYWSIVKRL
Trigger: TAGCCTTTTCACTATAGACCAATAGAAATGGAAGCAGTAGTTGTGGGGCATGAATATACAGACACAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS CAA 72 bp CTATTGGTCTATAGTGAAAAGGCTAGTGCTCTATCATaGCATTTATTGTCAGAATGTCTCCAGATATCCTTG +
Preference number: 6 (lower is better)
Translates to: LLVYSEKASALS*HLLSECLQISL
Trigger: CAAGGATATCTGGAGACATTCTGACAATAAATGCAATGATAGAGCACTAGCCTTTTCACTATAGACCAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS CAA 90 bp CTTCCATTTCTATTGGTCTATAGTGAAAAGGCTAGTGCTCTATCATaGCATTTATTGTCAGAATGTCTCCAGATATCCTTGCTGCTTATT +
Preference number: 6 (lower is better)
Translates to: LPFLLVYSEKASALS*HLLSECLQISLLLI
Trigger: AATAAGCAGCAAGGATATCTGGAGACATTCTGACAATAAATGCAATGATAGAGCACTAGCCTTTTCACTATAGACCAATAGAAATGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608535.1
CDS CAA 72 bp TATAGTGAAAAGGCTAGTGCTCTATCATTGCATTTATaGTCAGAATGTCTCCAGATATCCTTGCTGCTTATT +
Preference number: 6 (lower is better)
Translates to: YSEKASALSLHL*SECLQISLLLI
Trigger: AATAAGCAGCAAGGATATCTGGAGACATTCTGACAATAAATGCAATGATAGAGCACTAGCCTTTTCACTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608535.1