RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMIM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000214046

Ensembl transcript IDs: ENST00000358726.6, ENST00000397349.6, ENST00000461364.1, ENST00000461488.5, ENST00000463051.5, ENST00000465250.6, ENST00000481671.6, ENST00000487416.7, ENST00000487803.5, ENST00000593404.5, ENST00000593409.5, ENST00000594507.5, ENST00000594662.5, ENST00000597711.5, ENST00000597781.5, ENST00000598278.5, ENST00000599310.5, ENST00000600740.5, ENST00000602194.5, ENST00000627144.2

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCCAGATCTCCTATGTCCTGGAAGCATCTTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGACAGCAACCCCACATTCGGAGTCTC +
Preference number: 1 (lower is better)
Translates to: SPDLLCPGSIFANSH*GGTQTGQQPHIRSL
Trigger: GAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR TCA 90 bp GTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTaGGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCC +
Preference number: 1 (lower is better)
Translates to: VSGGQVQSIFSQPGQ*GSRRMLLPGLTAVA
Trigger: GGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR GCA 90 bp TGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATaGTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAACCGGGA +
Preference number: 1 (lower is better)
Translates to: CRASSANLDSEGVEG*FSLDSLLWPKQEPG
Trigger: TCCCGGTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR CCA 90 bp TCCTGGAAGCATCTTCGCAAACAGCCACTGGGGTGGCACGCAGACTaGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGAC +
Preference number: 1 (lower is better)
Translates to: SWKHLRKQPLGWHAD*TATPHSESQSLRTD
Trigger: GTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 90 bp AGATCTCCTATGTCCTGGAAGCATCTTCGCAAACAGCCACTGGGGTaGCACGCAGACTGGACAGCAACCCCACATTCGGAGTCTCAATCA +
Preference number: 1 (lower is better)
Translates to: RSPMSWKHLRKQPLG*HADWTATPHSESQS
Trigger: TGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR GCA 90 bp TCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAGAAGCAAGCCCCTCGGCGAACACTT +
Preference number: 1 (lower is better)
Translates to: SSTATPCNSQEQQQE*AHQTCQKQAPRRTL
Trigger: AAGTGTTCGCCGAGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR GCA 90 bp TCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTTGGACT +
Preference number: 1 (lower is better)
Translates to: SSTATPCNSQEQQQE*AHQTCQKQAPRAWT
Trigger: AGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR GCA 90 bp CAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATaGCATCCTCCCCAGATCTCCTATGTCCTGGAAGCATCTTCGCAA +
Preference number: 1 (lower is better)
Translates to: QSSWEYITVLVMRVK*HPPQISYVLEASSQ
Trigger: TTGCGAAGATGCTTCCAGGACATAGGAGATCTGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 90 bp AGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGATaGACCCACAGAGGCCAAGAACACCAGATTCTCCCGTCGTGTCTT +
Preference number: 1 (lower is better)
Translates to: RQLFVLSLSGGSIQG*THRGQEHQILPSCL
Trigger: AAGACACGACGGGAGAATCTGGTGTTCTTGGCCTCTGTGGGTCCATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 90 bp CTCAGATCCTCTCTGCCAGGTAGGATACCTTGGCAACAGTCTTCCTaGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCT +
Preference number: 1 (lower is better)
Translates to: LRSSLPGRIPWQQSS*EYITVLVMRVKCHP
Trigger: AGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGTATCCTACCTGGCAGAGAGGATCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
3UTR CCA 90 bp AGTCTCAATCACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATGGACCCACAGAGGCCAAGAACACCA +
Preference number: 1 (lower is better)
Translates to: SLNHSGQTTFCPLSF*GKHTGMDPQRPRTP
Trigger: TGGTGTTCTTGGCCTCTGTGGGTCCATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATTGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 90 bp AGTCTCATACATGCTCTCAGATCCTCTCTGCCAGGTAGGATACCTTaGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGG +
Preference number: 1 (lower is better)
Translates to: SLIHALRSSLPGRIP*QQSSWEYITVLVMR
Trigger: CCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGTATCCTACCTGGCAGAGAGGATCTGAGAGCATGTATGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
3UTR TCA 90 bp CTAGTTGAGCGGTTGGCAAATTTTTCTGGTAAGAGGCCAAACAGGTaGCATTTTCCATTCTGCAGGCCATATGGTCTCTGTGCCACTACT +
Preference number: 1 (lower is better)
Translates to: LVERLANFSGKRPNR*HFPFCRPYGLCATT
Trigger: AGTAGTGGCACAGAGACCATATGGCCTGCAGAATGGAAAATGTCACCTGTTTGGCCTCTTACCAGAAAAATTTGCCAACCGCTCAACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593409.5
3UTR GCA 90 bp AGATACTGCAGTTCACTTAGCCAACTTTCTGCATTGAGACATCCTTaGCAGGGATCCTGTCAGTTATGCGAAGATGCGGCACGAGATAAT +
Preference number: 1 (lower is better)
Translates to: RYCSSLSQLSALRHP*QGSCQLCEDAARDN
Trigger: ATTATCTCGTGCCGCATCTTCGCATAACTGACAGGATCCCTGGCAAGGATGTCTCAATGCAGAAAGTTGGCTAAGTGAACTGCAGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465250.6
3UTR CCA 90 bp GACAGGTCCCTTATAGTATTTAGGTACAACAAGGTCTTTTGTGCTTaGAATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAAC +
Preference number: 1 (lower is better)
Translates to: DRSLIVFRYNKVFCA*NALEKAASPVCEGN
Trigger: GTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATACTATAAGGGACCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465250.6
3UTR-3UTR CCA 90 bp GTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTGGGTGGCACGCAGACTaGACAGCAACCCCACATTCG +
Preference number: 2 (lower is better)
Translates to: VAGKPCTPRRTLFHPPRAGWHAD*TATPHS
Trigger: CGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCC...AGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGAAACAGCCACTGGGGTaGCACGCAGACTGGACAGCA +
Preference number: 2 (lower is better)
Translates to: AHLGEHFSTHHELGLSGKKQPLG*HADWTA
Trigger: TGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTT...CTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGA +
Preference number: 2 (lower is better)
Translates to: GKPCTPRRTLFHPPRAWTFANSH*GGTQTG
Trigger: TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAA...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GGATGTGAAAGCAGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: GCESSLLTGPLAGPRGCQHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...CTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 2 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCRGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000600740.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACTTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGA +
Preference number: 2 (lower is better)
Translates to: ENRDVAGKPCTPRRTLFHFANSH*GGTQTG
Trigger: TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAA...GTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGAGAGCCGAACAGCCTTaGCAACAGTCTTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: AGKPCTPRRTLFHPPRAWRAEQP*QQSSWE
Trigger: TTCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCT...CCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GGATGTGAAAGCAGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: GCESSLLTGPLAGPRGCQRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...CTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 2 (lower is better)
Translates to: AGKPCTPRRTLFHPPRAWSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...CCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR GCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGTGATGAGGGTGAAATaGCATCCTCCCCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVVMRVK*HPPQIS
Trigger: GGAGATCTGGGGAGGATGGCATTTCACCCTCATCAC...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR GCA 90 bp GGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 2 (lower is better)
Translates to: GGMETRHPGKVSSWFHRWEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...CCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR GCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTCTGGTCCCCTTGAATaGCAAGGAACAGAAACCCCT +
Preference number: 2 (lower is better)
Translates to: WETMHTSANTFPPTTSLDSGPLE*QGTETP
Trigger: AGGGGTTTCTGTTCCTTGGCATTCAAGGGGACCAGA...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463051.5
3UTR-3UTR CCA 90 bp ACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGGTGGCACGCAGACTaGACAGCAACCCCACATTCG +
Preference number: 2 (lower is better)
Translates to: TLFHPPRAWTFWEGCRFSGWHAD*TATPHS
Trigger: CGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCC...AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp AGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: SEGVEGCFSLDSLLWPKQHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...CTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
3UTR-3UTR CCA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: DVAGKPCTPRRTLFHPPRGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 2 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000600740.5
ENST00000627144.2
3UTR-3UTR GCA 90 bp GAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAACCGGGATATGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 2 (lower is better)
Translates to: EGCFSLDSLLWPKQEPGYEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...ATATCCCGGTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR CCA 90 bp GAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 2 (lower is better)
Translates to: ENRDVAGKPCTPRRTLFHSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...GTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp GGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGAGATTCGAAAGTATCTaGGGCTCAGCAAGAATTCCC +
Preference number: 2 (lower is better)
Translates to: GGMETRHPGKVSSWFHRWRFESI*GSARIP
Trigger: GGGAATTCTTGCTGAGCCTCAGATACTTTCGAATCT...CCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461488.5
ENST00000463051.5
3UTR-3UTR TCA 90 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 2 (lower is better)
Translates to: TPRRTLFHPPRAWTFWEGSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461488.5
ENST00000463051.5
3UTR-3UTR TCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 2 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR GCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAGTGATGAGGGTGAAATaGCATCCTCCCCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKVMRVK*HPPQIS
Trigger: GGAGATCTGGGGAGGATGGCATTTCACCCTCATCAC...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR GCA 90 bp TCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCAGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 2 (lower is better)
Translates to: SSANLDSEGVEGCFSLDSDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...TGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR-3UTR CCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCGGAAGCATACAGGGATaGACCCACAGAGGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVGSIQG*THRGQE
Trigger: TTCTTGGCCTCTGTGGGTCCATCCCTGTATGCTTCC...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACAGATCTCCTATGTCCTaGAAGCATCTTCGCAAACAG +
Preference number: 2 (lower is better)
Translates to: WETMHTSANTFPPTTSLDRSPMS*KHLRKQ
Trigger: CTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCT...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp ACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: TSANTFPPTTSLDFLGRLGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: TPRRTLFHPPRAWTFWEGGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp TGTGCTTGGAATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCGTAGTTCAGAGTCCATaGCTTGCTCTTGCCATGGGA +
Preference number: 2 (lower is better)
Translates to: CAWNALEKAASPVCEGNPVVQSP*LALAMG
Trigger: TCCCATGGCAAGAGCAAGTCATGGACTCTGAACTAC...GGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR TCA 90 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTAGATTCGAAAGTATCTaGGGCTCAGCAAGAATTCCC +
Preference number: 2 (lower is better)
Translates to: TPRRTLFHPPRAWTFWEGRFESI*GSARIP
Trigger: GGGAATTCTTGCTGAGCCTCAGATACTTTCGAATCT...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461488.5
ENST00000463051.5
3UTR-3UTR CCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
3UTR-3UTR CCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 2 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR-3UTR CCA 90 bp CTCAACAAGCAAATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 2 (lower is better)
Translates to: LNKQITQLWDSAPTPGVSSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...TGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTGCTTGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACACAAGCCCCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTQAPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTG...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR TCA 90 bp TGTGCTTGGAATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCGGTGGGTGGATCATTTaGGGTAAGGAGTTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: CAWNALEKAASPVCEGNPGGWII*GKELRD
Trigger: GTCTCTTAACTCCTTACCTCAAATGATCCACCCACC...GGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR TCA 90 bp CCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACAAGGCAATTTAGTACGTaGAGACTCCAGAGACCTGGG +
Preference number: 2 (lower is better)
Translates to: PTTSLDFLGRLSVFWSKTRQFST*RLQRPG
Trigger: CCCAGGTCTCTGGAGTCTTCACGTACTAAATTGCCT...TGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463051.5
3UTR-3UTR TCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAATCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 2 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000461488.5
ENST00000463051.5
3UTR-3UTR TCA 90 bp TTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 2 (lower is better)
Translates to: FRVHDLLLPWEKARKLVSGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR GCA 90 bp CTTGGAATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCAAAGGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 2 (lower is better)
Translates to: LGMPLKKLPHLFVKGTPKEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...CTTTGGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR GCA 90 bp GTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 2 (lower is better)
Translates to: VHDLLLPWEKARKLVSGGDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...ACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR-3UTR GCA 90 bp TGTGCTTGGAATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCTCAGAGTCCATGACTTaGTCTTGCCATGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: CAWNALEKAASPVCEGNPSESMT*SCHGKR
Trigger: CCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGA...GGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR CCA 90 bp TGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCTGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATG +
Preference number: 2 (lower is better)
Translates to: WQQSSWEYITVLVMRVKCCPLSF*GKHTGM
Trigger: CATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACA...GCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GGGCGTTTCATTTTGGCAACAAAACCAGGATTCCCTTTCAAAGAAGCTTCTGGAAAACAGCCACTGGGGTaGCACGCAGACTGGACAGCA +
Preference number: 2 (lower is better)
Translates to: GRFILATKPGFPFKEASGKQPLG*HADWTA
Trigger: TGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTT...TCCAGAAGCTTCTTTGAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp TCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: STHHELGLSGKVVGFLVKRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp ACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCATCAGACACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: TATPCNSQEQQQECAHQTRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR CCA 90 bp AGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: RKLVSGGQVQSIFSQPGQRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...CTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR-3UTR CCA 90 bp GCAAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: ARKLVSGGQVQSIFSQPGRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR CAA 90 bp CTGAGCCACTGCCCCTGGCCGTTCCTACAATTTCATGTAAGTTCCTaGATCTCCTCACAAGCCTTCTTTGTTCCTAGGCAAGTCTCATAC +
Preference number: 2 (lower is better)
Translates to: LSHCPWPFLQFHVSS*ISSQAFFVPRQVSY
Trigger: GTATGAGACTTGCCTAGGAACAAAGAAGGCTTGTGAGGAGATCAAGGAACTTACATGAAATTGTAGGAACGGCCAGGGGCAGTGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358726.6
3UTR-3UTR GCA 90 bp TTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCAAAGAGAAAGGGAGAGGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 2 (lower is better)
Translates to: LKKLPHLFVKGTPKRKGEDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...CTCTCCCTTTCTCTTTGGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
3UTR-3UTR CCA 90 bp CAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: QTLGEHFSTHHELGLSGKRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...CTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
3UTR-3UTR CCA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCRRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR-3UTR CCA 90 bp AGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: RQRKVSLNIPTTAPHVFCHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...ACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 2 (lower is better)
Translates to: GRGKFPLISPQLLHMSSVSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...CACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp TTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCAAAGAGAAAGGGAGAGGGTGGGTGGATCATTTaGGGTAAGGAGTTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: LKKLPHLFVKGTPKRKGEGGWII*GKELRD
Trigger: GTCTCTTAACTCCTTACCTCAAATGATCCACCCACC...CTCTCCCTTTCTCTTTGGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
3UTR-3UTR TCA 90 bp AAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 2 (lower is better)
Translates to: KADSETQGFRTWSQCTTSGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000599310.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp GGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGACCCTGTTGGGATGTaGAAGCAGTTTGTTAACAGG +
Preference number: 2 (lower is better)
Translates to: GRGKFPLISPQLLHMSSVDPVGM*KQFVNR
Trigger: CCTGTTAACAAACTGCTTTCACATCCCAACAGGGTC...CACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR GCA 90 bp AAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 2 (lower is better)
Translates to: KVSLNIPTTAPHVFCGNTVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...AGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp CAGGAGCAACAGCAGGAATGCGCTCATCAGACATGTCAGAAGCAAGCCCCACGAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: QEQQQECAHQTCQKQAPRRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR CCA 90 bp ACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: TKGSRQRKVSLNIPTTAPRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
3UTR CAA 90 bp AATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTCCCTTTCAAAGAAGCTTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: NHTVVGFSANPGRFI*ATKPGFPFKEASGK
Trigger: TTTTCCAGAAGCTTCTTTGAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp TATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTGAAAAAGCTGCCTAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACCA +
Preference number: 2 (lower is better)
Translates to: YLGTTRSFVLGMPLKKLPRQRLQ*AKITPP
Trigger: TGGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...AGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR GCA 90 bp TATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTGAAAAAGCTGCCTTCTCCCTGGACTCACTaGTGTGGCCTAAGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: YLGTTRSFVLGMPLKKLPSPWTH*CGLSRN
Trigger: GTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGA...AGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR CCA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACATGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATG +
Preference number: 2 (lower is better)
Translates to: GKFPLISPQLLHMSSVETCPLSF*GKHTGM
Trigger: CATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACA...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp AACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: NHAHLGEHFSTHHELGLSRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...AGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp TCACCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: SPTQKADSETQGFRTWSQHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp ACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: TFPPTTSLDFLGRLSVFWRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...CCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp TTAACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LTKGSRQRKVSLNIPTTARAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...AGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp TATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTGAAAAAGCTGCCTCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: YLGTTRSFVLGMPLKKLPHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...AGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR CCA 90 bp GTCTTGAAAACATTAGCAAGTTCTTTTAGGTCCAGGGTAGATACTGCAGTTCACAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 2 (lower is better)
Translates to: VLKTLASSFRSRVDTAVHKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...GTGAACTGCAGTATCTACCCTGGACCTAAAAGAACTTGCTAATGTTTTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465250.6
3UTR-3UTR CCA 90 bp GGGCGTTTCATTTTGGCAACAAAACCAGGATTCCCTTTCAAAGAAGCTTCTGGAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 2 (lower is better)
Translates to: GRFILATKPGFPFKEASGGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TCCAGAAGCTTCTTTGAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp ACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCTTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 2 (lower is better)
Translates to: TQKADSETQGFRTWSQCTLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...GGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: THHELGLSGKVVGFLVKNRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: VHDLLLPWEKARKLVSGGRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...ACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR-3UTR CCA 90 bp GTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTGCAAGAGCCGAACAGCCTTaGCAACAGTCTTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: VLEHGPNVPHHKITLIPARAEQP*QQSSWE
Trigger: TTCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCT...TGCAGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR GCA 90 bp AGGTCCCTTATAGTATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTTCCATGACTTGCTCTTaGCATGGGAAAAGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: RSLIVFRYNKVFCAWNALSMTCS*HGKRQG
Trigger: TCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGA...AAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATACTATAAGGGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465250.6
3UTR-3UTR CCA 90 bp AGGAATAGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: RNSLPQRHLVIARSNSRNRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...ATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACTATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR CCA 90 bp ACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: TKGSRQRKVSLNIPTTAPRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp AATCACTCTCATTCCTGCAACTGTACAATGAATGGCTCCCAAAGTCATTTTATTCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 2 (lower is better)
Translates to: NHSHSCNCTMNGSQSHFIHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...AATAAAATGACTTTGGGAGCCATTCATTGTACAGTTGCAGGAATGAGAGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR TCA 90 bp ACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCTTACATAAACGCTCCTaGAACCCTTTCAGTAGACAG +
Preference number: 2 (lower is better)
Translates to: TQKADSETQGFRTWSQCTLHKRS*NPFSRQ
Trigger: CTGTCTACTGAAAGGGTTTCAGGAGCGTTTATGTAA...GGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GTTTACCTCCAAGTCAGGATTTCAAAAACCACCAACATTCAGGCTCATTCTTATCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: VYLQVRISKTTNIQAHSYRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...ATAAGAATGAGCCTGAATGTTGGTGGTTTTTGAAATCCTGACTTGGAGGTAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp AGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: RGKFPLISPQLLHMSSVERLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GKFPLISPQLLHMSSVETRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CCA 90 bp TCACCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 2 (lower is better)
Translates to: SPTQKADSETQGFRTWSQRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp GCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: ANLDSEGVEGCFSLDSLLPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...CAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
3UTR CCA 72 bp ATGTCCTGGAAGCATCTTCGCAAACAGCCACTGGGGTaGCACGCAGACTGGACAGCAACCCCACATTCGGAG +
Preference number: 3 (lower is better)
Translates to: MSWKHLRKQPLG*HADWTATPHSE
Trigger: CTCCGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR CCA 72 bp CTCCTATGTCCTGGAAGCATCTTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGACAGCAACCCCACATT +
Preference number: 3 (lower is better)
Translates to: LLCPGSIFANSH*GGTQTGQQPHI
Trigger: AATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp TGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGCAAGCCCCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: CQEVKCRASSANLDSEGVASPTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTGC...TACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR TCA 72 bp GGAATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCTGGGATTCAAGAGCCG +
Preference number: 3 (lower is better)
Translates to: GMEEWRLGIPGK*VPGFIAGIQEP
Trigger: CGGCTCTTGAATCCCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487803.5
ENST00000627144.2
3UTR GCA 72 bp GCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAGAAGCAAGCCCCTCGG +
Preference number: 3 (lower is better)
Translates to: ATPCNSQEQQQE*AHQTCQKQAPR
Trigger: CCGAGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR GCA 72 bp TCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATaGTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAG +
Preference number: 3 (lower is better)
Translates to: SSANLDSEGVEG*FSLDSLLWPKQ
Trigger: CTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR CCA 72 bp GGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCAAGAGCCGAACAGCAC +
Preference number: 3 (lower is better)
Translates to: GMETRHPGKVSS*FHRWDSRAEQH
Trigger: GTGCTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461488.5
ENST00000463051.5
3UTR CCA 72 bp GGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCAAGAGCCGAACAGCCT +
Preference number: 3 (lower is better)
Translates to: GMETRHPGKVSS*FHRWDSRAEQP
Trigger: AGGCTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp ATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACAACCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: ITQLWDSAPTPGVSFWQQPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...TTGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
3UTR TCA 72 bp GGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTaGGGGAGTAGAAGGATGCTTCTCCCTGGACTCACT +
Preference number: 3 (lower is better)
Translates to: GQVQSIFSQPGQ*GSRRMLLPGLT
Trigger: AGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR GCA 72 bp CTGCAACCTCCGCCTCCCAGATTTAAGCAATTCTTGTaGCTCAGCCACCCGAGTAGCTGGGATTATAGGCGT +
Preference number: 3 (lower is better)
Translates to: LQPPPPRFKQFL*LSHPSSWDYRR
Trigger: ACGCCTATAATCCCAGCTACTCGGGTGGCTGAGGCACAAGAATTGCTTAAATCTGGGAGGCGGAGGTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR GCA 72 bp GCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAGAAGCAAGCCCCACGA +
Preference number: 3 (lower is better)
Translates to: ATPCNSQEQQQE*AHQTCQKQAPR
Trigger: TCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR CCA 72 bp TTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGATaGACCCACAGAGGCCAAGAACACCAGATTCTCCCG +
Preference number: 3 (lower is better)
Translates to: FVLSLSGGSIQG*THRGQEHQILP
Trigger: CGGGAGAATCTGGTGTTCTTGGCCTCTGTGGGTCCATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 72 bp GACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAA +
Preference number: 3 (lower is better)
Translates to: DPRRTLFHPPRA*TFWEGCRFSGQ
Trigger: TTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
3UTR-3UTR CAA 90 bp GCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: AGKPCTPRRTLFHPPRAWDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...CCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: THHELGLSGKVVGFLVKNPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp GCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGAAGAATTCCCGGATGTaGTCACCTGTAATCCCAGCT +
Preference number: 3 (lower is better)
Translates to: AHLGEHFSTHHELGLSGKKNSRM*SPVIPA
Trigger: AGCTGGGATTACAGGTGACAACATCCGGGAATTCTT...CTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461488.5
3UTR TCA 72 bp GAACCGGGATATTCAAGAGCACTGCAGAGGAAGCCGTaGCGAGGCAGGTTCACACAGCTGTACAGGAATAGT +
Preference number: 3 (lower is better)
Translates to: EPGYSRALQRKP*RGRFTQLYRNS
Trigger: ACTATTCCTGTACAGCTGTGTGAACCTGCCTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATCCCGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
3UTR CCA 72 bp CACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATGGACCCACAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: HSGQTTFCPLSF*GKHTGMDPQRP
Trigger: TGGCCTCTGTGGGTCCATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 72 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAA +
Preference number: 3 (lower is better)
Translates to: TPRRTLFHPPRA*TFWEGCRFSGQ
Trigger: TTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp GGAAGTAGTTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GSSSESMTCSCHGKRQGSPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...ACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAACTACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
3UTR-3UTR CAA 90 bp GGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GRGKFPLISPQLLHMSSVPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...CACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000602194.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp ACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: TSANTFPPTTSLDFLGRLDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
3UTR GCA 72 bp TGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATaGCATCCTCCCCAGATCTCCTATGTCCTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: WEYITVLVMRVK*HPPQISYVLEA
Trigger: TGCTTCCAGGACATAGGAGATCTGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CCA 72 bp CATGCTCTCAGATCCTCTCTGCCAGGTAGGATACCTTaGCAACAGTCTTCCTGGGAATACATCACGGTCCTT +
Preference number: 3 (lower is better)
Translates to: HALRSSLPGRIP*QQSSWEYITVL
Trigger: AAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGTATCCTACCTGGCAGAGAGGATCTGAGAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
3UTR CCA 72 bp GCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTTaGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAA +
Preference number: 3 (lower is better)
Translates to: AHQTCQKQAPRA*TFWEGCRFSGQ
Trigger: TTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR-3UTR CAA 90 bp ATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCAAAGAGAAAGTGTATTCCCAGCTACTaGGGAGGTAGAGGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: MPLKKLPHLFVKGTPKRKCIPSY*GGRGRR
Trigger: TCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATACA...CTTTCTCTTTGGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR CCA 72 bp TCTCTGCCAGGTAGGATACCTTGGCAACAGTCTTCCTaGGAATACATCACGGTCCTTGTGATGAGGGTGAAA +
Preference number: 3 (lower is better)
Translates to: SLPGRIPWQQSS*EYITVLVMRVK
Trigger: TTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGTATCCTACCTGGCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
3UTR CCA 72 bp GATTCAAGAGCCGAACAGCCTTGGCAACAGTCTTCCTaGGAATACATCACGGTCCTTGTGATGAGGGTGAAA +
Preference number: 3 (lower is better)
Translates to: DSRAEQPWQQSS*EYITVLVMRVK
Trigger: TTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCTTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR CCA 72 bp CTGAGTGGCCAAGCAGACCCACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCT +
Preference number: 3 (lower is better)
Translates to: LSGQADPRAWTF*EGCRFSGQKHS
Trigger: AGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCTTGGCCACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
3UTR-3UTR CAA 90 bp AATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACAGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: NHTVVGFSANPGRFILATDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...TGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACAAGCAGACCCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GKFPLISPQLLHMSSVETSRPTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCT...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
3UTR GCA 72 bp CAGTTATGCGAAGATGCGGCACGAGATAATTCCTCTTaGTGTGATGGTTCGTCCTCAATGACAGGTCCCTTA +
Preference number: 3 (lower is better)
Translates to: QLCEDAARDNSS*CDGSSSMTGPL
Trigger: TAAGGGACCTGTCATTGAGGACGAACCATCACAGCAAGAGGAATTATCTCGTGCCGCATCTTCGCATAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465250.6
3UTR GCA 72 bp AGTTCACTTAGCCAACTTTCTGCATTGAGACATCCTTaGCAGGGATCCTGTCAGTTATGCGAAGATGCGGCA +
Preference number: 3 (lower is better)
Translates to: SSLSQLSALRHP*QGSCQLCEDAA
Trigger: TGCCGCATCTTCGCATAACTGACAGGATCCCTGGCAAGGATGTCTCAATGCAGAAAGTTGGCTAAGTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465250.6
3UTR-3UTR CAA 90 bp TATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTGAAAAAGCTGCCTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: YLGTTRSFVLGMPLKKLPPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...AGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
3UTR-3UTR CAA 90 bp AAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: KKQTQKPKVLEHGPNVPHPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...ATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp AAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTAAGAGCCGAACAGCCTaGGCAACAGTCTTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: KVSLNIPTTAPHVFCGNTKSRTA*ATVFLG
Trigger: TCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCTT...AGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR-3UTR CAA 90 bp GTTTACCTCCAAGTCAGGATTTCAAAAACCACCAACATTCAGGCTCATTCTTATCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 3 (lower is better)
Translates to: VYLQVRISKTTNIQAHSYPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...ATAAGAATGAGCCTGAATGTTGGTGGTTTTTGAAATCCTGACTTGGAGGTAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000627144.2
3UTR TCA 72 bp CGGTTGGCAAATTTTTCTGGTAAGAGGCCAAACAGGTaGCATTTTCCATTCTGCAGGCCATATGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: RLANFSGKRPNR*HFPFCRPYGLC
Trigger: ACAGAGACCATATGGCCTGCAGAATGGAAAATGTCACCTGTTTGGCCTCTTACCAGAAAAATTTGCCAACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593409.5
3UTR-3UTR CAA 90 bp AAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: KKQTQKPKVLEHGPNVPHDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...ATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
3UTR CCA 72 bp CTTATAGTATTTAGGTACAACAAGGTCTTTTGTGCTTaGAATGCCCTTGAAAAAGCTGCCTCACCTGTTTGT +
Preference number: 3 (lower is better)
Translates to: LIVFRYNKVFCA*NALEKAASPVC
Trigger: ACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATACTATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR GCA 90 bp CAAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGGCGCCCCCGCGTCCTaGCTGGCTCTCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QADPRRTLFHPPRAWTFWGAPAS*LALSSQ
Trigger: CTGGGAAGAGAGAGCCAGGCAGGACGCGGGGGCGCC...CCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600740.5
CDS-3UTR CCA 90 bp CGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCCACTCCAACCTGTGCTaGGCTCCCTGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGWETMHTSANTFPPTTSHSNLC*APWTPP
Trigger: GGGAGGAGTCCAGGGAGCCCAGCACAGGTTGGAGTG...GCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461488.5
CDS-3UTR GCA 90 bp GTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATGCGGCGCCCCCGCGTCCTaGCTGGCTCTCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VKCRASSANLDSEGVEGCGAPAS*LALSSQ
Trigger: CTGGGAAGAGAGAGCCAGGCAGGACGCGGGGGCGCC...GCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594662.5
CDS-3UTR GCA 90 bp GCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGCCCTCTCAAGCCCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: AHLGEHFSTHHELGLSGKPSQAL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGGCTTGAGAGGG...CTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463051.5
CDS-3UTR GCA 90 bp GTCAGAAGCAAGCCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTGAGCCGAACAGCCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: VRSKPLGEHFSTHHELGLEPNSL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGGCTC...AAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGGCTTGCTTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR GCA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGGAGCCGAACAGCCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCREPNSL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGGCTC...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000597711.5
ENST00000598278.5
ENST00000602194.5
CDS-3UTR GCA 90 bp AAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGGAGCCGAACAGCCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KQTLGEHFSTHHELGLSGEPNSL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGGCTC...CCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602194.5
CDS-3UTR CCA 90 bp CTGAGTGGCCAAGCAGACCCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTCCCCGAGAGCCAGAATaGGAGGAGCGGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSGQADPRAWTFWEGCRFPREPE*EERGLL
Trigger: CAGGAGACCCCGCTCCTCCCATTCTGGCTCTCGGGG...AAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCTTGGCCACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp GACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: DVAGKPCTPRRTLFHPPRGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp GGCACGCAGACTGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGGGATGTTGTCACCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GTQTGQQPHIRSLNHSGQGCCHL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGTGACAACATCC...CTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp GCCAGGAGCAACAGCAGGAATGCGCTCATCAGACATGTCAGAAGCAAGCCCCTCGGATGTTGTCACCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: ARSNSRNALIRHVRSKPLGCCHL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGTGACAACATCC...GAGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481671.6
CDS-3UTR GCA 90 bp CAAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGGATGTTGTCACCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QADPRRTLFHPPRAWTFWGCCHL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGTGACAACATCC...CCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593404.5
ENST00000600740.5
CDS-3UTR GCA 90 bp AATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCGAAGCGTGCCGCGCATaGGTGAGGTCTCGATGCCGT +
Preference number: 4 (lower is better)
Translates to: NGGMETRHPGKVSSWFHREACRA*VRSRCR
Trigger: ACGGCATCGAGACCTCACGCATGCGCGGCACGCTTC...GCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR CCA 90 bp ACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGGGGTGGCACGCAGACTaGACAGCAACCCCACATTCG +
Preference number: 4 (lower is better)
Translates to: TSANTFPPTTSLDFLGRLGWHAD*TATPHS
Trigger: CGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCC...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGGAGGGTGGCACGCAGACTaGACAGCAACCCCACATTCG +
Preference number: 4 (lower is better)
Translates to: RNGDSASRESEFLVSSLGGWHAD*TATPHS
Trigger: CGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCC...TCCCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: DVAGKPCTPRRTLFHPPRKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...TCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGCCGAACAGCCTGTGCTaGGCTCCCTGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: HFSTHHELGLSGKVVGFLPNSLC*APWTPP
Trigger: GGGAGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGG...CAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000597711.5
ENST00000598278.5
ENST00000602194.5
CDS-3UTR CCA 90 bp AGCAGACCCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAAGGAGCGGGGTCTCCTaGGGGCGGGATTGGGTCACG +
Preference number: 4 (lower is better)
Translates to: SRPTSLDFLGRLSVFWSKRSGVS*GRDWVT
Trigger: CGTGACCCAATCCCGCCCCCAGGAGACCCCGCTCCT...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: WETMHTSANTFPPTTSLDGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: PLGEHFSTHHELGLSGKVGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...AACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp AAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: KQGRGWETMHTSANTFPPGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...GGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp GGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: GGMETRHPGKVSSWFHRWRQRLQ*AKITPP
Trigger: TGGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...CCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGGGCAGGAGAATTGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ANLDSEGVEGCFSLDSLLGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCAATTCTCCTGCC...CAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGGGCAGGAGAATTGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GGMETRHPGKVSSWFHRWGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCAATTCTCCTGCC...CCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GAAAGCAGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGACTCAGCTAGTTTCGAACTCCTaGCCTCAAGTGATCCGCCTA +
Preference number: 4 (lower is better)
Translates to: ESSLLTGPLAGPRGCQTQLVSNS*PQVIRL
Trigger: TAGGCGGATCACTTGAGGTCAGGAGTTCGAAACTAG...CTGAGTCTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTGGATGTTGTCACCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCGCCHL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGTGACAACATCC...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000600740.5
ENST00000627144.2
CDS-3UTR GCA 90 bp AAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCGGATGTTGTCACCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: KTGTWLGNHAHLGEHFSTGCCHL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGTGACAACATCC...GGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGAGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: LGNHAHLGEHFSTHHELGVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...TCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp GCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: AHLGEHFSTHHELGLSGKVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...CTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAGAGCCGAACAGCCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKEPNSL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGGCTC...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000597711.5
ENST00000598278.5
ENST00000602194.5
CDS-3UTR GCA 90 bp GGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTGCGCGCAGCCCCACTTaGCCAATTCTTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: GKPCTPRRTLFHPPRAWTARSPT*PILDHH
Trigger: ATGATGGTCAAGAATTGGGCAAGTGGGGCTGCGCGC...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCAGGCCCCAGTGCTAGATaGAAAGGCAATCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RDVAGKPCTPRRTLFHPPGPSAR*KGNLLE
Trigger: CTCAAGCAGATTGCCTTTCCATCTAGCACTGGGGCC...TGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GCAAGCCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ASPSANTFPPTTSLDFLGHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGGCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CCA 90 bp CCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACACCGAACAGCCTGTGCTaGGCTCCCTGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PTTSLDFLGRLSVFWSKTPNSLC*APWTPP
Trigger: GGGAGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGG...TGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000597711.5
ENST00000598278.5
ENST00000602194.5
CDS-3UTR TCA 90 bp CTGAGTGGCCAAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LSGQADPRRTLFHPPRAWSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...CCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTTGGCCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593404.5
ENST00000600740.5
CDS-3UTR TCA 90 bp AAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: KTGTWLGNHAHLGEHFSTGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...GGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: SEGVEGCFSLDSLLWPKQGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...CTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp TCTTCCACAGCGACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTAGCCAACCTGGACAGTaGGGGAGTAGAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: SSTATPRRTLFHPPRAWTSQPGQ*GSRRML
Trigger: AAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCT...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTCGCTGTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598278.5
CDS-3UTR TCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTGGCAGGAGAATTGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCAATTCTCCTGCC...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR GCA 90 bp TCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAACTGCACTCCAACCTGTaGTGGGCTCCCTGGACTCCT +
Preference number: 4 (lower is better)
Translates to: STHHELGLSGKVVGFLVKLHSNL*WAPWTP
Trigger: AGGAGTCCAGGGAGCCCAGCACAGGTTGGAGTGCAG...TTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461488.5
CDS-3UTR GCA 90 bp GCCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: APRRTLFHPPRAWTFWEGEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR GCA 90 bp GACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGTCTCCCTGGACTCACTaGTGTGGCCTAAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DSEGVEGCFSLDSLLWPKSPWTH*CGLSRN
Trigger: GTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGA...CTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp GAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAATCTCCCTGGACTCACTaGTGTGGCCTAAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EGVEGCFSLDSLLWPKQESPWTH*CGLSRN
Trigger: GTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGA...TTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp CGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTTAAGCAATTCTTGTaGCTCAGCCACCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RGWETMHTSANTFPPTTSFKQFL*LSHPSS
Trigger: GCTACTCGGGTGGCTGAGGCACAAGAATTGCTTAAA...GCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGATGTGAAAGCAGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGTGGCAACAGTCTTCCTaGGAATACATCACGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GCESSLLTGPLAGPRGCQWQQSS*EYITVL
Trigger: AAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA...CTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCATCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: RDVAGKPCTPRRTLFHPPSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...TGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGNHAHLGEHFSTHHELGHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRPSANTFPPTTSLDFLGHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTGAGTGGCCAAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGTCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSGQADPRRTLFHPPRAWSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...CCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTTGGCCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp GAAAGCAGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGACTCAGTCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESSLLTGPLAGPRGCQTQSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...CTGAGTCTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PLGEHFSTHHELGLSGKVKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...AACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CCA 90 bp GCAAGCCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAGTATTCCCAGCTACTTaGGAGGTAGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ASPSANTFPPTTSLDFLGVFPAT*EVEAGE
Trigger: TTCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATAC...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAGCGCCCCACCTCGCTaGGGAGGCCCCGAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHSAPPR*GGPESQ
Trigger: CTGGCTCTCGGGGCCTCCCCAGCGAGGTGGGGCGCT...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp CGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTAGGTCGAGTCTGCAGTaGGCCATGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: RTLFHPPRAWTFWEGCRFRSSLQ*AMIAPL
Trigger: CAGTGGTGCGATCATGGCTCACTGCAGACTCGACCT...AAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461488.5
CDS-3UTR GCA 90 bp AACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: NHAHLGEHFSTHHELGLSVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...AGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCRDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR GCA 90 bp GCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: ANLDSEGVEGCFSLDSLLDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...CAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTTCAATCTCAGCTCACTaGAACCTCCGCCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCSISAH*NLRLPD
Trigger: ATCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATTGA...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp TTAACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTGAGGGTCCCGCCCTCTaGAGGCCAGACCCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LTKGSRQRKVSLNIPTTAEGPAL*RPDPLR
Trigger: CCTAAGGGGGTCTGGCCTGCAGAGGGCGGGACCCTC...AGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR CCA 90 bp ACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGATGGACCCACAGAGGAAACAGCCACTGGGGTaGCACGCAGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: TFCPLSFWGKHTGMDPQRKQPLG*HADWTA
Trigger: TGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTT...CCTCTGTGGGTCCATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAATTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKFANSH*GGTQTG
Trigger: TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAA...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACAATTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: ITQLWDSAPTPGVSFWQQFANSH*GGTQTG
Trigger: TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAA...TTGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCRSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: KQTLGEHFSTHHELGLSGSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...CCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp ACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TSANTFPPTTSLDFLGRLHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: NHAHLGEHFSTHHELGLSKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...AGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTCAACAAGCAAATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCAAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: LNKQITQLWDSAPTPGVSKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...TGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTGCTTGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: GKPCTPRRTLFHPPRAWTLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTATGTCCTGGAAGCATCTTCGCAAACAGCCACTGGGGTGGCACGCAGACTGGATTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: LCPGSIFANSHWGGTQTGLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCATCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDVAGKPCTPRRTLFHPPSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...TGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGTGGCCAAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SGQADPRRTLFHPPRAWTSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTTGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp AGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SEGVEGCFSLDSLLWPKQKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...CTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp GCGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTTGGACTTTCTGGGAAGAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: ALIRHVRSKPHELGLSGKKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...CTTCCCAGAAAGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR CAA 72 bp CACACCTCGGCGAACACTTTTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HTSANTFPPTTS*DFLGRLSVFWS
Trigger: TGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
3UTR CAA 72 bp AGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RPSANTFPPTTS*DFLGRLSVFWS
Trigger: TGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
3UTR CAA 72 bp GACACCTCGGCGAACACTTTTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: DTSANTFPPTTS*DFLGRLSVFWS
Trigger: TGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598278.5
CDS-3UTR TCA 90 bp GCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGAGATTCGAAAGTATCTaGGGCTCAGCAAGAATTCCC +
Preference number: 4 (lower is better)
Translates to: AGKPCTPRRTLFHPPRAWRFESI*GSARIP
Trigger: GGGAATTCTTGCTGAGCCTCAGATACTTTCGAATCT...CCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CTATGTCCTGGAAGCATCTTCGCAAACAGCCACTGGGGTGGCACGCAGACTGGATCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LCPGSIFANSHWGGTQTGSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp TCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: STHHELGLSGKVVGFLVKGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR TCA 90 bp ACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: TFPPTTSLDFLGRLSVFWGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...CCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTACATAAACGCTCCTaGAACCCTTTCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: RGWETMHTSANTFPPTTSLHKRS*NPFSRQ
Trigger: CTGTCTACTGAAAGGGTTTCAGGAGCGTTTATGTAA...GCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp GGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTGACCCTGTTGGGATGTaGAAGCAGTTTGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: GKPCTPRRTLFHPPRAWTDPVGM*KQFVNR
Trigger: CCTGTTAACAAACTGCTTTCACATCCCAACAGGGTC...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCAGCCAACCTGGACAGTaGGGGAGTAGAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: SLPQRHLVIARSNSRNALSQPGQ*GSRRML
Trigger: AAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCT...GAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp AATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCAGCCAACCTGGACAGTaGGGGAGTAGAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: NGGMETRHPGKVSSWFHRSQPGQ*GSRRML
Trigger: AAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCT...GCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGTAGTTCAGAGTCCATaGCTTGCTCTTGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVVVQSP*LALAMG
Trigger: TCCCATGGCAAGAGCAAGTCATGGACTCTGAACTAC...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR TCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVRQRLQ*AKITPP
Trigger: TGGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGCCAACTTTCTGCATTaGGACATCCTTGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVANFLH*DILARD
Trigger: ATCCCTGGCAAGGATGTCTCAATGCAGAAAGTTGGC...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR TCA 90 bp AAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCTAGTTTCGAACTCCTaGCCTCAAGTGATCCGCCTA +
Preference number: 4 (lower is better)
Translates to: KTGTWLGNHAHLGEHFSTLVSNS*PQVIRL
Trigger: TAGGCGGATCACTTGAGGTCAGGAGTTCGAAACTAG...GGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTCGTGCCGCGCATGCGTaGGGTCTCGATGCCGTAGGG +
Preference number: 4 (lower is better)
Translates to: KVSLNIPTTAPHVFCGNTRAAHA*GLDAVG
Trigger: CCCTACGGCATCGAGACCTCACGCATGCGCGGCACG...AGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR GCA 90 bp CGCAGACTGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAAGTGATGAGGGTGAAATaGCATCCTCCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: RRLDSNPTFGVSITQDRQVMRVK*HPPQIS
Trigger: GGAGATCTGGGGAGGATGGCATTTCACCCTCATCAC...TTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTTCTGGTCCCCTTGAATaGCAAGGAACAGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCSGPLE*QGTETP
Trigger: AGGGGTTTCTGTTCCTTGGCATTCAAGGGGACCAGA...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463051.5
CDS-3UTR GCA 90 bp GACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: DSEGVEGCFSLDSLLWPKDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...CTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp ACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCTCCCTGGACTCACTaGTGTGGCCTAAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TFPPTTSLDFLGRLSVFWSPWTH*CGLSRN
Trigger: GTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGA...CCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR GCA 90 bp GCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTCCATGACTTGCTCTTaGCATGGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ANLDSEGVEGCFSLDSLLSMTCS*HGKRQG
Trigger: TCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGA...CAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTAAGCAATTCTTGTaGCTCAGCCACCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WETMHTSANTFPPTTSLDFKQFL*LSHPSS
Trigger: GCTACTCGGGTGGCTGAGGCACAAGAATTGCTTAAA...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGGATGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATG +
Preference number: 4 (lower is better)
Translates to: RNGDSASRESEFLVSSLGCPLSF*GKHTGM
Trigger: CATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACA...TCCCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGAGGGTGGCACGCAGACTaGACAGCAACCCCACATTCG +
Preference number: 4 (lower is better)
Translates to: TQDRQLFVLSLSGGSIQGGWHAD*TATPHS
Trigger: CGAATGTGGGGTTGCTGTCCAGTCTGCGTGCCACCC...TCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: DSEGVEGCFSLDSLLWPKSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...CTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp ATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGATCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: MHTSANTFPPTTSLDFLGSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: TPRRTLFHPPRAWTFWEGSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LGNHAHLGEHFSTHHELGGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CAAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: QADPRRTLFHPPRAWTFWGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...CCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp AACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NHAHLGEHFSTHHELGLSHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...AGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GAATGCGCTCATCAGACATGTCAGAAGCAAGCCCCTCGGCGAACACTTTTCCACCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ECAHQTCQKQAPRRTLFHHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...GTGGAAAAGTGTTCGCCGAGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: TPRRTLFHPPRAWTFWEGLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: WETMHTSANTFPPTTSLDSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCRSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TTAACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCGAACAGCCTGTGCTaGGCTCCCTGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LTKGSRQRKVSLNIPTTAPNSLC*APWTPP
Trigger: GGGAGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGG...AGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597711.5
ENST00000602194.5
CDS-3UTR CCA 90 bp GAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAACCGGGATATGTATTCCCAGCTACTTaGGAGGTAGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGCFSLDSLLWPKQEPGYVFPAT*EVEAGE
Trigger: TTCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATAC...ATATCCCGGTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CCA 90 bp CGCAGACTGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAAAGAGCCGAACAGCCTTaGCAACAGTCTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RRLDSNPTFGVSITQDRQRAEQP*QQSSWE
Trigger: TTCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCT...TTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTCCGGGCGTTTCATTTTaGCAACAAAACCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: GKPCTPRRTLFHPPRAWTPGVSF*QQNQDS
Trigger: GGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGG...AGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACGCAGACTGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACACAAATCACACAGTTGTaGGATTCAGCGCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: TQTGQQPHIRSLNHSGQTQITQL*DSAPTP
Trigger: CGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTG...TGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAATTCTGCAGGCCATATaGTCTCTGTGCCACTACTCC +
Preference number: 4 (lower is better)
Translates to: MHTSANTFPPTTSLDFLGILQAI*SLCHYS
Trigger: GGAGTAGTGGCACAGAGACCATATGGCCTGCAGAAT...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CCA 90 bp TGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTACAAGCCCCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CQEVKCRASSANLDSEGVQAPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTG...TACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CCA 90 bp AGCAGACCCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAAACAGTGGCGAGGGCTaGGCCAATCGAAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SRPTSLDFLGRLSVFWSKNSGEG*ANRRSR
Trigger: CCTTGACCTTCGATTGGCCCAGCCCTCGCCACTGTT...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599310.5
3UTR CAA 72 bp TCACTGCAACCTCCGCCTCCCAGATTTAAGCAATTCTaGTGCCTCAGCCACCCGAGTAGCTGGGATTATAGG +
Preference number: 4 (lower is better)
Translates to: SLQPPPPRFKQF*CLSHPSSWDYR
Trigger: CCTATAATCCCAGCTACTCGGGTGGCTGAGGCACAAGAATTGCTTAAATCTGGGAGGCGGAGGTTGCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
3UTR CAA 72 bp CGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTaGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSSDMSEASPTS*DFLGRLSVFWS
Trigger: TGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ENRDVAGKPCTPRRTLFHSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...GTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CTGAGTGGCCAAGCAGACCCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LSGQADPRAWTFWEGCRFSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...AAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCTTGGCCACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp GTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: VHDLLLPWEKARKLVSGGGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...ACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp CCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: PTTSLDFLGRLSVFWSKTGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCCCTGCAACTGTACAATaGATGGCTCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: KQGRGWETMHTSANTFPPPATVQ*MAPKVI
Trigger: AATGACTTTGGGAGCCATTCATTGTACAGTTGCAGG...GGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp TTCCCGGATGTTGTCACTCTGGTCCCCTTGAATGCCAAGGAACAGAAACCCCTCAGGCAATTTAGTACGTaGAGACTCCAGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: FPDVVTLVPLNAKEQKPLRQFST*RLQRPG
Trigger: CCCAGGTCTCTGGAGTCTTCACGTACTAAATTGCCT...GAGGGGTTTCTGTTCCTTGGCATTCAAGGGGACCAGAGTGACAACATCCGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463051.5
CDS-3UTR TCA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: THHELGLSGKVVGFLVKNRQRLQ*AKITPP
Trigger: TGGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp GAATGCGCTCATCAGACATGTCAGAAGCAAGCCCCTCGGCGAACACTTTTCCACTGCTTGGAATGCCCTTaGAAAAGCTGCCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: ECAHQTCQKQAPRRTLFHCLECP*KSCLTC
Trigger: ACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCA...GTGGAAAAGTGTTCGCCGAGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp AGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCTGCTTGGAATGCCCTTaGAAAAGCTGCCTCACCTGT +
Preference number: 4 (lower is better)
Translates to: SLPQRHLVIARSNSRNALCLECP*KSCLTC
Trigger: ACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCA...GAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp ACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGCCACAAGGGTACAGATaGTTCCCTGAGTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TFPPTTSLDFLGRLSVFWPQGYR*FPEWLW
Trigger: CCAAAGCCACTCAGGGAATCATCTGTACCCTTGTGG...CCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR GCA 90 bp CAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGATATTCAAGAGCACTaGAGAGGAAGCCGTGACGAG +
Preference number: 4 (lower is better)
Translates to: QEVKCRASSANLDSEGVEDIQEH*RGSRDE
Trigger: CTCGTCACGGCTTCCTCTGCAGTGCTCTTGAATATC...TTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTCCATGACTTGCTCTTaGCATGGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGSMTCS*HGKRQG
Trigger: TCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGA...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR GCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTTCCATGACTTGCTCTTaGCATGGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCSMTCS*HGKRQG
Trigger: TCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGA...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR GCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTTCAGAGTCCATGACTTaGTCTTGCCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCSESMT*SCHGKR
Trigger: CCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGA...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR GCA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTCAGAGTCCATGACTTaGTCTTGCCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGSESMT*SCHGKR
Trigger: CCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGA...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR GCA 90 bp GGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGTGCGTGAGGTCTCGATaGCGTAGGGTTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRGKFPLISPQLLHMSSVCVRSR*RRVSWA
Trigger: TGCCCAGCTAACCCTACGGCATCGAGACCTCACGCA...CACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR CCA 90 bp TCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCATCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: SSANLDSEGVEGCFSLDSSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...TGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp TGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTATCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: CQEVKCRASSANLDSEGVSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...TACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp AAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: KPCTPRRTLFHPPRAWTFSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...GAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: ENRDVAGKPCTPRRTLFHGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...GTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: EGVEGCFSLDSLLWPKQEGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GCAAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ARKLVSGGQVQSIFSQPGHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR CCA 90 bp ACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TFPPTTSLDFLGRLSVFWHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...CCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGATCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGNHAHLGEHFSTHHELGSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...TCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTCCGAACAGCCTGTGCTaGGCTCCCTGGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KVSLNIPTTAPHVFCGNTPNSLC*APWTPP
Trigger: GGGAGGAGTCCAGGGAGCCCAGCACAGGCTGTTCGG...AGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597711.5
ENST00000602194.5
CDS-3UTR CCA 90 bp AGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RKLVSGGQVQSIFSQPGQKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...CTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAGGATGCTTCTCCCTaGACTCACTGCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVKDASP*THCCGL
Trigger: TAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTT...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR CCA 90 bp AATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCGTATTCCCAGCTACTTaGGAGGTAGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NGGMETRHPGKVSSWFHRVFPAT*EVEAGE
Trigger: TTCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATAC...GCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CCA 90 bp AGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGGACCGGGCGTTTCATTTTaGCAACAAAACCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RNGDSASRESEFLVSSLGPGVSF*QQNQDS
Trigger: GGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGG...TCCCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAATCCTGGGGGCGGGATTaGGTCACGCGTTCGAAGCGT +
Preference number: 4 (lower is better)
Translates to: RGKFPLISPQLLHMSSVESWGRD*VTRSKR
Trigger: ACGCTTCGAACGCGTGACCCAATCCCGCCCCCAGGA...TTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp GAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAAAGATTCGAAAGTATCTaGGGCTCAGCAAGAATTCCC +
Preference number: 4 (lower is better)
Translates to: EGVEGCFSLDSLLWPKQERFESI*GSARIP
Trigger: GGGAATTCTTGCTGAGCCTCAGATACTTTCGAATCT...TTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp CTCAACAAGCAAATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LNKQITQLWDSAPTPGVSSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...TGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTGCTTGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: NGGMETRHPGKVSSWFHRSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...GCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000594662.5
ENST00000597781.5
ENST00000599310.5
ENST00000600740.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTCAAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: HDLLLPWEKARKLVSGGQGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TTGACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp AGGAATAGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: RNSLPQRHLVIARSNSRNGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...ATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp AAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCTTACATAAACGCTCCTaGAACCCTTTCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: KQGRGWETMHTSANTFPPLHKRS*NPFSRQ
Trigger: CTGTCTACTGAAAGGGTTTCAGGAGCGTTTATGTAA...GGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCCCTGCAACTGTACAATaGATGGCTCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVPATVQ*MAPKVI
Trigger: AATGACTTTGGGAGCCATTCATTGTACAGTTGCAGG...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp TCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAGTAGTTCAGAGTCCATaGCTTGCTCTTGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: STHHELGLSGKVVGFLVKVVQSP*LALAMG
Trigger: TCCCATGGCAAGAGCAAGTCATGGACTCTGAACTAC...TTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR TCA 90 bp CATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTCAAAGGCAGAGGTTGCAGTaGGCCAAGATCACACCACCA +
Preference number: 4 (lower is better)
Translates to: HDLLLPWEKARKLVSGGQRQRLQ*AKITPP
Trigger: TGGTGGTGTGATCTTGGCTCACTGCAACCTCTGCCT...TTGACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp AGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGCAGGAGAATTGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RVHDLLLPWEKARKLVSGGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCAATTCTCCTGCC...TCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATGCGGTGGGTGGATCATTTaGGGTAAGGAGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: VKCRASSANLDSEGVEGCGGWII*GKELRD
Trigger: GTCTCTTAACTCCTTACCTCAAATGATCCACCCACC...GCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp AGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCGGTGGGTGGATCATTTaGGGTAAGGAGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLPQRHLVIARSNSRNALGGWII*GKELRD
Trigger: GTCTCTTAACTCCTTACCTCAAATGATCCACCCACC...GAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACTCATGGCCTCCAAAATaGATCCTAGGTTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ENRDVAGKPCTPRRTLFHSWPPK*ILGFSS
Trigger: GCTGGAAAAACCTAGGATTCATTTTGGAGGCCATGA...GTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp TGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCTCTCAGATCCTCTCTaGCAGGTAGGATACCTTGGC +
Preference number: 4 (lower is better)
Translates to: WQQSSWEYITVLVMRVKCLSDPL*QVGYLG
Trigger: GCCAAGGTATCCTACCTGGCAGAGAGGATCTGAGAG...GCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR GCA 90 bp TGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCATCAGACATGTCAGAAGCAATCTCCCTGGACTCACTaGTGTGGCCTAAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: CNSQEQQQECAHQTCQKQSPWTH*CGLSRN
Trigger: GTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGA...TTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR GCA 90 bp AATGCGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTTGGACTTTCTGGGTCCATGACTTGCTCTTaGCATGGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: NALIRHVRSKPHELGLSGSMTCS*HGKRQG
Trigger: TCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGA...CCCAGAAAGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
CDS-3UTR GCA 90 bp TCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCATCAGAGTCCATGACTTaGTCTTGCCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSANLDSEGVEGCFSLDSSESMT*SCHGKR
Trigger: CCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGA...TGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp GAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAACCGGGATATGTCCAGGGTAGATACTaGAGTTCACTTAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: EGCFSLDSLLWPKQEPGYVQGRY*SSLSQL
Trigger: AAGTTGGCTAAGTGAACTGCAGTATCTACCCTGGAC...ATATCCCGGTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR CCA 90 bp ACCTTGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAGGCCCCAGTGCTAGATaGAAAGGCAATCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TLATVFLGIHHGPCDEGEGPSAR*KGNLLE
Trigger: CTCAAGCAGATTGCCTTTCCATCTAGCACTGGGGCC...TTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CCA 90 bp TTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCTCCCCATGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATG +
Preference number: 4 (lower is better)
Translates to: FLGIHHGPCDEGEMPSSPCPLSF*GKHTGM
Trigger: CATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACA...TGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTAAACAGCCACTGGGGTaGCACGCAGACTGGACAGCA +
Preference number: 4 (lower is better)
Translates to: RQRKVSLNIPTTAPHVFCKQPLG*HADWTA
Trigger: TGCTGTCCAGTCTGCGTGCCACCCCAGTGGCTGTTT...ACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GCCATCCTCCCCAGATCTCCTATGTCCTGGAAGCATCTTCGCAAACAGCCACTGAGATCTCCTATGTCCTaGAAGCATCTTCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: AILPRSPMSWKHLRKQPLRSPMS*KHLRKQ
Trigger: CTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCT...CAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCTGGGGAGGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCTCCCCAGATCCAGGTAGGATACCTTaGCAACAGTCTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LGIHHGPCDEGEMPSSPDPGRIP*QQSSWE
Trigger: TTCCCAGGAAGACTGTTGCCAAGGTATCCTACCTGG...ATCTGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CCA 90 bp TCTGGTCCCCTTGAATGCCAAGGAACAGAAACCCCTCCGAGGGAAGGCAATTTATCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: SGPLECQGTETPPREGNLSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...TAAATTGCCTTCCCTCGGAGGGGTTTCTGTTCCTTGGCATTCAAGGGGACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463051.5
CDS-3UTR CCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: NHAHLGEHFSTHHELGLSGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...AGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: SLPQRHLVIARSNSRNALGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...GAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CCA 90 bp AATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NGGMETRHPGKVSSWFHRRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...GCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000594662.5
ENST00000597781.5
ENST00000599310.5
ENST00000600740.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: RTLFHPPRAWTFWEGCRFLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...AAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACATTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: NHTVVGFSANPGRFILATLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...TGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGATCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: MHTSANTFPPTTSLDFLGSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TPRRTLFHPPRAWTFWEGSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTATTCCCAGCTACTTaGGAGGTAGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HFSTHHELGLSGKVVGFLVFPAT*EVEAGE
Trigger: TTCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATAC...CAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CCA 90 bp ACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTCAAATCACACAGTTGTaGGATTCAGCGCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: TLFHPPRAWTFWEGCRFSQITQL*DSAPTP
Trigger: CGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTG...AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACCAAATCACACAGTTGTaGGATTCAGCGCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: THHELGLSGKVVGFLVKNQITQL*DSAPTP
Trigger: CGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTG...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAACAGGCTGGAGTGCAATaGTGCAATCTCGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKQAGVQ*CNLGSS
Trigger: TGATGAACCGAGATTGCACCATTGCACTCCAGCCTG...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACACACACAAAGGGGTGTaGCCAGATTCTAATACAACT +
Preference number: 4 (lower is better)
Translates to: WETMHTSANTFPPTTSLDTHKGV*PDSNTT
Trigger: AGTTGTATTAGAATCTGGCCACACCCCTTTGTGTGT...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CCA 90 bp AAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCAATCGAAGGTCAAGGCTaGGAGGGTCCCGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KADSETQGFRTWSQCTTSIEGQG*EGPALC
Trigger: GCAGAGGGCGGGACCCTCCCAGCCTTGACCTTCGAT...TGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp AAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCAGATTCGAAAGTATCTaGGGCTCAGCAAGAATTCCC +
Preference number: 4 (lower is better)
Translates to: KPCTPRRTLFHPPRAWTFRFESI*GSARIP
Trigger: GGGAATTCTTGCTGAGCCTCAGATACTTTCGAATCT...GAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AAATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KSHSCGIQRQPRAFHFGNSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...GTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTTTACATAAACGCTCCTaGAACCCTTTCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCLHKRS*NPFSRQ
Trigger: CTGTCTACTGAAAGGGTTTCAGGAGCGTTTATGTAA...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCGACCCTGTTGGGATGTaGAAGCAGTTTGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVDPVGM*KQFVNR
Trigger: CCTGTTAACAAACTGCTTTCACATCCCAACAGGGTC...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AATGGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCCCTGCAACTGTACAATaGATGGCTCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: NGGMETRHPGKVSSWFHRPATVQ*MAPKVI
Trigger: AATGACTTTGGGAGCCATTCATTGTACAGTTGCAGG...GCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCCCTGCAACTGTACAATaGATGGCTCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: KPCTPRRTLFHPPRAWTFPATVQ*MAPKVI
Trigger: AATGACTTTGGGAGCCATTCATTGTACAGTTGCAGG...GAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTAGTTCAGAGTCCATaGCTTGCTCTTGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTVVQSP*LALAMG
Trigger: TCCCATGGCAAGAGCAAGTCATGGACTCTGAACTAC...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp CGCAGACTGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAATCATGGCCTCCAAAATaGATCCTAGGTTTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRLDSNPTFGVSITQDRQSWPPK*ILGFSS
Trigger: GCTGGAAAAACCTAGGATTCATTTTGGAGGCCATGA...TTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCAGTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp GGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGCACTTGCCCAATTCTTaGCCATCATTTATTGAGCTA +
Preference number: 4 (lower is better)
Translates to: GGMETRHPGKVSSWFHRWHLPNS*PSFIEL
Trigger: TAGCTCAATAAATGATGGTCAAGAATTGGGCAAGTG...CCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp TGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAACTTTTTGGTGATGAGGGTGAAATaGCATCCTCCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: WTATPHSESQSLRTDNFLVMRVK*HPPQIS
Trigger: GGAGATCTGGGGAGGATGGCATTTCACCCTCATCAC...CAAAAAGTTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTACAAGCCAATCCTTCTaGTCAGATCTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCTSQSF*SDLWIE
Trigger: TTCTATCCAGAGATCTGAGCAGAAGGATTGGCTTGT...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp GCAAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGATCCATGACTTGCTCTTaGCATGGGAAAAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ARKLVSGGQVQSIFSQPGSMTCS*HGKRQG
Trigger: TCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGA...TCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp GCAAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGATCAGAGTCCATGACTTaGTCTTGCCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: ARKLVSGGQVQSIFSQPGSESMT*SCHGKR
Trigger: CCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGA...TCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp AAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCACGCGTTCGAAGCGTaGCGCGCATGCGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KKQTQKPKVLEHGPNVPHHAFEA*RACVRS
Trigger: AGACCTCACGCATGCGCGGCACGCTTCGAACGCGTG...ATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR GCA 90 bp CAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAATCATCAGCAACGTCCTaGAGAGGGAGAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: QEVKCRASSANLDSEGVESSATS*RGRITV
Trigger: AACTGTAATTCTCCCTCTGCAGGACGTTGCTGATGA...TTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594662.5
CDS-3UTR CCA 90 bp TCACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGGAAGCATACAGGGATaGACCCACAGAGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLRTDNFLSSLFLGEAYRGSIQG*THRGQE
Trigger: TTCTTGGCCTCTGTGGGTCCATCCCTGTATGCTTCC...CCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTTGTCCTCTCTCTTTCTaGGGGAAGCATACAGGGATG +
Preference number: 4 (lower is better)
Translates to: TLFHPPRAWTFWEGCRFSCPLSF*GKHTGM
Trigger: CATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACA...AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AATCACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACATTCGCAAACAGCCACTaGGGTGGCACGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: NHSGQTTFCPLSFWGKHTFANSH*GGTQTG
Trigger: TCCAGTCTGCGTGCCACCCCAGTGGCTGTTTGCGAA...TGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: PTTSLDFLGRLSVFWSKTSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...TGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: HFSTHHELGLSGKVVGFLGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...CAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VAGKPCTPRRTLFHPPRARLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...AGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NHTVVGFSANPGRFILATRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CAATCACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: QSLRTDNFLSSLFLGEAYKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...GTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTTTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: TLFHPPRAWTFWEGCRFSLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGCAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: PSANTFPPTTSLDFLGRLQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593404.5
CDS-3UTR CCA 90 bp GGAGGAATGGAGACTCGGCATCCCGGGAAAGTGAGTTCCTGGTTTCATCGCTGGCAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: GGMETRHPGKVSSWFHRWQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...CCAGCGATGAAACCAGGAACTCACTTTCCCGGGATGCCGAGTCTCCATTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACAAATCACACAGTTGTaGGATTCAGCGCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: TKGSRQRKVSLNIPTTAPQITQL*DSAPTP
Trigger: CGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTG...TGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGAATAGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATCAAGCCCCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RNSLPQRHLVIARSNSRNQAPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTG...ATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
3UTR CAA 72 bp GTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTCCCTTTCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VVGFSANPGRFI*ATKPGFPFKEA
Trigger: AGCTTCTTTGAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CTCATACATGCTCTCAGATCCTCTCTGCCAGGTAGGATACCTTGGCAACAGTCTTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: LIHALRSSLPGRIPWQQSSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...AGACTGTTGCCAAGGTATCCTACCTGGCAGAGAGGATCTGAGAGCATGTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR TCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACATCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp TCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCTCCCCAGGAAAGGCAATCTGCTTaGGTTTTCTCAGCACAATCA +
Preference number: 4 (lower is better)
Translates to: SWEYITVLVMRVKCHPPQERQSA*VFSAQS
Trigger: TGATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTC...CTGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAGGCATCCCGGGAAAGTaGGTTCCTGGTTTCATCGCT +
Preference number: 4 (lower is better)
Translates to: RGKFPLISPQLLHMSSVEGIPGK*VPGFIA
Trigger: AGCGATGAAACCAGGAACTCACTTTCCCGGGATGCC...TTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTCAAGTAGTTCAGAGTCCATaGCTTGCTCTTGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: HDLLLPWEKARKLVSGGQVVQSP*LALAMG
Trigger: TCCCATGGCAAGAGCAAGTCATGGACTCTGAACTAC...TTGACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp AAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGGTGGGTGGATCATTTaGGGTAAGGAGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KEVSVRRSSAEHLQPTWTGGWII*GKELRD
Trigger: GTCTCTTAACTCCTTACCTCAAATGATCCACCCACC...TGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp TGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAATGGTTCGTCCTCAATaGCAGGTCCCTTATAGTATT +
Preference number: 4 (lower is better)
Translates to: CQEVKCRASSANLDSEGVMVRPQ*QVPYSI
Trigger: AATACTATAAGGGACCTGTCATTGAGGACGAACCAT...TACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR GCA 90 bp GGAAGTAGTTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: GSSSESMTCSCHGKRQGSEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...ACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAACTACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR GCA 90 bp TGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCATCAGACATGTCAGAAGCAAGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: CNSQEQQQECAHQTCQKQEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...TTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR GCA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGTCTCCCTGGACTCACTaGTGTGGCCTAAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLSPWTH*CGLSRN
Trigger: GTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGA...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp AAAGGCAAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTCAGAGTCCATGACTTaGTCTTGCCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KGKEVSVRRSSAEHLQPTSESMT*SCHGKR
Trigger: CCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGA...GGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR GCA 90 bp CACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGCGAGATAATTCCTCTTaGTGTGATGGTTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: HFSTHHELGLSGKVVGFLRDNSS*CDGSSS
Trigger: TGAGGACGAACCATCACAGCAAGAGGAATTATCTCG...CAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR GCA 90 bp ATTTTCCATTCTGCAGGCCATATGGTCTCTGTGCCACTACTCCACTTTGAAGTTTGGCCCAGGCTGGAGTaGAATGGTGCAATCTCGGTT +
Preference number: 4 (lower is better)
Translates to: IFHSAGHMVSVPLLHFEVWPRLE*NGAISV
Trigger: AACCGAGATTGCACCATTGCACTCCAGCCTGGGCCA...AACTTCAAAGTGGAGTAGTGGCACAGAGACCATATGGCCTGCAGAATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CCA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTGGCCCCAGTGCTAGATaGAAAGGCAATCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HHELGLSGKVVGFLVKNIGPSAR*KGNLLE
Trigger: CTCAAGCAGATTGCCTTTCCATCTAGCACTGGGGCC...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACCTTGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAATGGCAACAGTCTTCCTaGGAATACATCACGGTCCTT +
Preference number: 4 (lower is better)
Translates to: TLATVFLGIHHGPCDEGEWQQSS*EYITVL
Trigger: AAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA...TTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CCA 90 bp CAATCACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACCTGAGCCACTGCCCCTaGCCGTTCCTACAATTTCAT +
Preference number: 4 (lower is better)
Translates to: QSLRTDNFLSSLFLGEAYLSHCP*PFLQFH
Trigger: ATGAAATTGTAGGAACGGCCAGGGGCAGTGGCTCAG...GTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CCA 90 bp AAGCAGACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KQTLGEHFSTHHELGLSGRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...CCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp CCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PSANTFPPTTSLDFLGRLRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp GACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DPRRTLFHPPRAWTFWEGRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CCA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: WETMHTSANTFPPTTSLDRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: THHELGLSGKVVGFLVKNRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: HHELGLSGKVVGFLVKNIHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAATCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCTCCCCATCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FLGIHHGPCDEGEMPSSPSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...TGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCCAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: LGEHFSTHHELGLSGKVVQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...GACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: ENRDVAGKPCTPRRTLFHQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...GTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCCGGGCGTTTCATTTTaGCAACAAAACCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: WQQSSWEYITVLVMRVKCPGVSF*QQNQDS
Trigger: GGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGG...GCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTCAAATCACACAGTTGTaGGATTCAGCGCCAACCCCG +
Preference number: 4 (lower is better)
Translates to: QGRGKFPLISPQLLHMSSQITQL*DSAPTP
Trigger: CGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTG...AGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTTGCCGTAGGGTTAGCTaGGCAGCAATTCCTACTCAC +
Preference number: 4 (lower is better)
Translates to: QGRGKFPLISPQLLHMSSCRRVS*AAIPTH
Trigger: GTGAGTAGGAATTGCTGCCCAGCTAACCCTACGGCA...AGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp CACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGAGATTCGAAAGTATCTaGGGCTCAGCAAGAATTCCC +
Preference number: 4 (lower is better)
Translates to: HSGQTTFCPLSFWGKHTGRFESI*GSARIP
Trigger: GGGAATTCTTGCTGAGCCTCAGATACTTTCGAATCT...CCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAATTACATAAACGCTCCTaGAACCCTTTCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKLHKRS*NPFSRQ
Trigger: CTGTCTACTGAAAGGGTTTCAGGAGCGTTTATGTAA...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACAAAATTACATAAACGCTCCTaGAACCCTTTCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: HTVVGFSANPGRFILATKLHKRS*NPFSRQ
Trigger: CTGTCTACTGAAAGGGTTTCAGGAGCGTTTATGTAA...TTTTGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR TCA 90 bp ACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAACTTTTTGTCCTCTCTCGACCCTGTTGGGATGTaGAAGCAGTTTGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: TPHSESQSLRTDNFLSSLDPVGM*KQFVNR
Trigger: CCTGTTAACAAACTGCTTTCACATCCCAACAGGGTC...GAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGAGCCAACCTGGACAGTaGGGGAGTAGAAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLSQPGQ*GSRRML
Trigger: AAGCATCCTTCTACTCCCTCACTGTCCAGGTTGGCT...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTGTAGTTCAGAGTCCATaGCTTGCTCTTGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: HHELGLSGKVVGFLVKNIVVQSP*LALAMG
Trigger: TCCCATGGCAAGAGCAAGTCATGGACTCTGAACTAC...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR TCA 90 bp ATGCCCTTGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACCCCAAAGAGAAAGGGTGGGTGGATCATTTaGGGTAAGGAGTTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: MPLKKLPHLFVKGTPKRKGGWII*GKELRD
Trigger: GTCTCTTAACTCCTTACCTCAAATGATCCACCCACC...CTTTCTCTTTGGGGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp CTCAACAAGCAAATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCACACTTGCCCAATTCTTaGCCATCATTTATTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LNKQITQLWDSAPTPGVSHLPNS*PSFIEL
Trigger: TAGCTCAATAAATGATGGTCAAGAATTGGGCAAGTG...TGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTGCTTGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp ATTTTCCATTCTGCAGGCCATATGGTCTCTGTGCCACTACTCCACTTTGAAGTTGTACAGATGATTCCCTaGGTGGCTTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IFHSAGHMVSVPLLHFEVVQMIP*VALGGK
Trigger: CTTCCCTCCCAAAGCCACTCAGGGAATCATCTGTAC...AACTTCAAAGTGGAGTAGTGGCACAGAGACCATATGGCCTGCAGAATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR GCA 90 bp CCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: PTQKADSETQGFRTWSQCVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...ACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp ACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: TQKADSETQGFRTWSQCTVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...GGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp AAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCAGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: KADSETQGFRTWSQCTTSVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...TGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCACAAGCCAATCCTTCTaGTCAGATCTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVTSQSF*SDLWIE
Trigger: TTCTATCCAGAGATCTGAGCAGAAGGATTGGCTTGT...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp TTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGAGCAACAGCAGGAATaGGCTCATCAGACATGTCAG +
Preference number: 4 (lower is better)
Translates to: FRVHDLLLPWEKARKLVSEQQQE*AHQTCQ
Trigger: CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTC...TGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR GCA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTGGATCCTGTCAGTTATaGGAAGATGCGGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: HHELGLSGKVVGFLVKNIGSCQL*EDAARD
Trigger: ATCTCGTGCCGCATCTTCGCATAACTGACAGGATCC...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR GCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATGCGCGCAGCCCCACTTaGCCAATTCTTGACCATCAT +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHARSPT*PILDHH
Trigger: ATGATGGTCAAGAATTGGGCAAGTGGGGCTGCGCGC...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCAGATCTCCTATGTCCTaGAAGCATCTTCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: WQQSSWEYITVLVMRVKCRSPMS*KHLRKQ
Trigger: CTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCT...GCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TQDRQLFVLSLSGGSIQGGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DSEGVEGCFSLDSLLWPKRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...CTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp GGAAGTAGTTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSSSESMTCSCHGKRQGSRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...ACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAACTACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GKFPLISPQLLHMSSVETHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACTCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: THHELGLSGKVVGFLVKNSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTATCCTAAAGCAACAGTaGCGAGGGCTGGGCCAATCG +
Preference number: 4 (lower is better)
Translates to: PTQKADSETQGFRTWSQCILKQQ*RGLGQS
Trigger: CGATTGGCCCAGCCCTCGCCACTGTTGCTTTAGGAT...ACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp TTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCATCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: FRVHDLLLPWEKARKLVSSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...TGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR TCA 90 bp GGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGCCTGCAACTGTACAATaGATGGCTCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: GRGKFPLISPQLLHMSSVPATVQ*MAPKVI
Trigger: AATGACTTTGGGAGCCATTCATTGTACAGTTGCAGG...CACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR GCA 90 bp AAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTTCAATCTCAGCTCACTaGAACCTCCGCCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KVSLNIPTTAPHVFCGNTSISAH*NLRLPD
Trigger: ATCTGGGAGGCGGAGGTTGCAGTGAGCTGAGATTGA...AGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTGGAAGCATACAGGGATaGACCCACAGAGGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PTQKADSETQGFRTWSQCGSIQG*THRGQE
Trigger: TTCTTGGCCTCTGTGGGTCCATCCCTGTATGCTTCC...ACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTTGGCAACAGTCTTCCTaGGAATACATCACGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RQRKVSLNIPTTAPHVFCWQQSS*EYITVL
Trigger: AAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA...ACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: FRVHDLLLPWEKARKLVSGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp AGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RQRKVSLNIPTTAPHVFCRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...ACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATTTTGGCAACAACAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: ITQLWDSAPTPGVSFWQQQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...TTGTTGCCAAAATGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000627144.2
3UTR CAA 72 bp CATTCGGAGTCTCAATCACTCAGGACAGACAACTTTTaGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGAT +
Preference number: 4 (lower is better)
Translates to: HSESQSLRTDNF*SSLFLGEAYRD
Trigger: ATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATTGAGACTCCGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
3UTR CAA 72 bp TGCCCCTGGCCGTTCCTACAATTTCATGTAAGTTCCTaGATCTCCTCACAAGCCTTCTTTGTTCCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: CPWPFLQFHVSS*ISSQAFFVPRQ
Trigger: TTGCCTAGGAACAAAGAAGGCTTGTGAGGAGATCAAGGAACTTACATGAAATTGTAGGAACGGCCAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR TCA 90 bp TGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAACTTTTTGGAAAGGCAATCTGCTTaGGTTTTCTCAGCACAATCA +
Preference number: 4 (lower is better)
Translates to: WTATPHSESQSLRTDNFLERQSA*VFSAQS
Trigger: TGATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTC...CAAAAAGTTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR GCA 90 bp GGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGACAAGCCAATCCTTCTaGTCAGATCTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: GRGKFPLISPQLLHMSSVTSQSF*SDLWIE
Trigger: TTCTATCCAGAGATCTGAGCAGAAGGATTGGCTTGT...CACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTTCATCAGCAACGTCCTaGAGAGGGAGAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: HHELGLSGKVVGFLVKNISSATS*RGRITV
Trigger: AACTGTAATTCTCCCTCTGCAGGACGTTGCTGATGA...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600740.5
CDS-3UTR CCA 90 bp AAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: KVSLNIPTTAPHVFCGNTSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...AGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TTAACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: LTKGSRQRKVSLNIPTTAGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...AGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GKFPLISPQLLHMSSVETGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000594662.5
ENST00000597711.5
ENST00000597781.5
ENST00000598278.5
ENST00000599310.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAACGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: RGKFPLISPQLLHMSSVERAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...TTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GTTTACCTCCAAGTCAGGATTTCAAAAACCACCAACATTCAGGCTCATTCTTATAAACAGGGACGTGGCTaGGAAACCATGCACACCTCG +
Preference number: 4 (lower is better)
Translates to: VYLQVRISKTTNIQAHSYKQGRG*ETMHTS
Trigger: CGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTT...ATAAGAATGAGCCTGAATGTTGGTGGTTTTTGAAATCCTGACTTGGAGGTAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATTTGAAAACAGGGACGTaGCTGGGAAACCATGCACAC +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHLKTGT*LGNHAH
Trigger: GTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAA...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACATCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKFPLISPQLLHMSSVETSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTTCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RQRKVSLNIPTTAPHVFCSTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...ACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTTCCACATGTCTTCTGTaGAAACACTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HHELGLSGKVVGFLVKNISTCLL*KHFTRN
Trigger: GTTCCTGGTGAAGTGTTTCCACAGAAGACATGTGGA...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATAGAGCCGAACAGCCTTaGCAACAGTCTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KKQTQKPKVLEHGPNVPHRAEQP*QQSSWE
Trigger: TTCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCT...ATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCTTCCCTGAGTGGCTTTaGGAGGGAAGGGACACCTTG +
Preference number: 4 (lower is better)
Translates to: TQKPKVLEHGPNVPHHKIFPEWL*EGRDTL
Trigger: CAAGGTGTCCCTTCCCTCCCAAAGCCACTCAGGGAA...GATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593409.5
3UTR CAA 72 bp TTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTaGAAAAAGCTGCCTCACCTGTTTGTGAAGGGAACC +
Preference number: 4 (lower is better)
Translates to: LGTTRSFVLGMP*KKLPHLFVKGT
Trigger: GGTTCCCTTCACAAACAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR TCA 90 bp CATGCAGAACATCATGAAGATGTTCCACAGGGCGATGAAGATTCGAAAGTATCTTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: HAEHHEDVPQGDEDSKVSSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...AGATACTTTCGAATCTTCATCGCCCTGTGGAACATCTTCATGATGTTCTGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461488.5
ENST00000463051.5
CDS-3UTR TCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATTCATGCAGAACATCATaGAGATGTTCCACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHSCRTS*RCSTGR
Trigger: TCGCCCTGTGGAACATCTTCATGATGTTCTGCATGA...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGAAAGGCAATCTGCTTaGGTTTTCTCAGCACAATCA +
Preference number: 4 (lower is better)
Translates to: QGRGKFPLISPQLLHMSSERQSA*VFSAQS
Trigger: TGATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTC...AGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATGACCCTGTTGGGATGTaGAAGCAGTTTGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHDPVGM*KQFVNR
Trigger: CCTGTTAACAAACTGCTTTCACATCCCAACAGGGTC...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp AAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTGTGGCTGGGAAACCATaGACACCTCGGCGAACACTT +
Preference number: 4 (lower is better)
Translates to: KVLEHGPNVPHHKITLIPVAGKP*TPRRTL
Trigger: AAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC...AGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AGGTCCCTTATAGTATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: RSLIVFRYNKVFCAWNALSWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...AAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATACTATAAGGGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR CCA 90 bp AAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTTGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: KFPLISPQLLHMSSVETLGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...AAGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PTTSLDFLGRLSVFWSKTRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATCGAGCTTGGACTTTCTaGGAAGGTTGTCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHRAWTF*EGCRFS
Trigger: AGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCG...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCCACCCACCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: TQKPKVLEHGPNVPHHKIHPPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTG...GATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTCCGGGCGTTTCATTTTaGCAACAAAACCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: PTQKADSETQGFRTWSQCPGVSF*QQNQDS
Trigger: GGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGG...ACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCCCGGGCGTTTCATTTTaGCAACAAAACCAGGATTCC +
Preference number: 4 (lower is better)
Translates to: TQKADSETQGFRTWSQCTPGVSF*QQNQDS
Trigger: GGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGG...GGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTGCAGCAGACCCACGAGCTTaGACTTTCTGGGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: VLEHGPNVPHHKITLIPAADPRA*TFWEGC
Trigger: ACAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGC...TGCAGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR TCA 90 bp TTAACAAAGGGGTCAAGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTGCCACTACTCCACTTTaGAGTTATAGTATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LTKGSRQRKVSLNIPTTAATTPL*SYSMEV
Trigger: AACCTCCATACTATAACTTCAAAGTGGAGTAGTGGC...AGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCTTGACCCCTTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CCA 90 bp AAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCAAGATCTCCTATGTCCTaGAAGCATCTTCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: KADSETQGFRTWSQCTTSRSPMS*KHLRKQ
Trigger: CTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCT...TGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTTCCTGGTTTCATCGCTaGGATTCAAGAGCCGAACAG +
Preference number: 4 (lower is better)
Translates to: PKVLEHGPNVPHHKITLISWFHR*DSRAEQ
Trigger: CTGTTCGGCTCTTGAATCCCAGCGATGAAACCAGGA...AATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGAAGTAGTTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSSESMTCSCHGKRQGSRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...ACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAACTACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR TCA 90 bp GTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTGCAGACCCTGTTGGGATGTaGAAGCAGTTTGTTAACAGG +
Preference number: 4 (lower is better)
Translates to: VLEHGPNVPHHKITLIPADPVGM*KQFVNR
Trigger: CCTGTTAACAAACTGCTTTCACATCCCAACAGGGTC...TGCAGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR GCA 90 bp AAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACACTTACAAGCCAATCCTTCTaGTCAGATCTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: KFPLISPQLLHMSSVETLTSQSF*SDLWIE
Trigger: TTCTATCCAGAGATCTGAGCAGAAGGATTGGCTTGT...AAGTGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTGCAGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: VLEHGPNVPHHKITLIPAGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...TGCAGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp ACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCGGGAAAGTGAGTTCCTaGTTTCATCGCTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: TQKPKVLEHGPNVPHHKIGKVSS*FHRWDS
Trigger: TGAATCCCAGCGATGAAACCAGGAACTCACTTTCCC...GATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp TTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: FRVHDLLLPWEKARKLVSRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...TGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CCA 90 bp AAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTTCTATACAGGAAGGCTaGTGTCTCTGTTACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KVLEHGPNVPHHKITLIPSIQEG*CLCYRW
Trigger: CCACCTGTAACAGAGACACCAGCCTTCCTGTATAGA...AGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp CCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTCAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: PTQKADSETQGFRTWSQCQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...ACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATCAAGGTTTTAGAACATaGTCCCAATGTACCACATCA +
Preference number: 4 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHQGFRT*SQCTTS
Trigger: TGATGTGGTACATTGGGACCATGTTCTAAAACCTTG...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp GGGCGTTTCATTTTGGCAACAAAACCAGGATTCCCTTTCAAAGAAGCTTCTGGACAAAAGGACTCAGGTTaGAAATTGACTTCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: GRFILATKPGFPFKEASGQKDSG*KLTSWL
Trigger: TAACCAAGAAGTCAATTTCCAACCTGAGTCCTTTTG...TCCAGAAGCTTCTTTGAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR TCA 90 bp AATCACTCTCATTCCTGCAACTGTACAATGAATGGCTCCCAAAGTCATTTTATTCCTGCAACTGTACAATaGATGGCTCCCAAAGTCATT +
Preference number: 4 (lower is better)
Translates to: NHSHSCNCTMNGSQSHFIPATVQ*MAPKVI
Trigger: AATGACTTTGGGAGCCATTCATTGTACAGTTGCAGG...AATAAAATGACTTTGGGAGCCATTCATTGTACAGTTGCAGGAATGAGAGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR GCA 90 bp CCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTACAAGCCAATCCTTCTaGTCAGATCTCTGGATAGAA +
Preference number: 4 (lower is better)
Translates to: PKVLEHGPNVPHHKITLITSQSF*SDLWIE
Trigger: TTCTATCCAGAGATCTGAGCAGAAGGATTGGCTTGT...AATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR TCA 90 bp CCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTTTGATTAACCACACTTaGAAATGGGAGGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: PKVLEHGPNVPHHKITLILINHT*KWEGRF
Trigger: AAATCTTCCCTCCCATTTTCAAGTGTGGTTAATCAA...AATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CCA 90 bp CCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PKVLEHGPNVPHHKITLIRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...AATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTAGGTTGTCGGTTTTCTaGTCAAAAACATTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KVLEHGPNVPHHKITLIPRLSVF*SKTFLK
Trigger: CTTCAAGAATGTTTTTGACCAGAAAACCGACAACCT...AGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CCA 90 bp AAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTCAAAAGGACTCAGGTTaGAAATTGACTTCTTGGTTA +
Preference number: 4 (lower is better)
Translates to: KVLEHGPNVPHHKITLIPQKDSG*KLTSWL
Trigger: TAACCAAGAAGTCAATTTCCAACCTGAGTCCTTTTG...AGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS GCA 90 bp GAGCGGGGTCTCCTGGGGGCGGGATTGGGTCACGCGTTCGAAGCGTaGCGCGCATGCGTGAGGTCTCGATGCCGTAGGGTTAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ERGLLGAGLGHAFEA*RACVRSRCRRVSWA
Trigger: TGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATCCCGCCCCCAGGAGACCCCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS GCA 90 bp CTCCTGGGGGCGGGATTGGGTCACGCGTTCGAAGCGTGCCGCGCATaGGTGAGGTCTCGATGCCGTAGGGTTAGCTGGGCAGCAATTCCT +
Preference number: 5 (lower is better)
Translates to: LLGAGLGHAFEACRA*VRSRCRRVSWAAIP
Trigger: AGGAATTGCTGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATCCCGCCCCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS TCA 90 bp TGGGGGCGGGATTGGGTCACGCGTTCGAAGCGTGCCGCGCATGCGTaGGGTCTCGATGCCGTAGGGTTAGCTGGGCAGCAATTCCTACTC +
Preference number: 5 (lower is better)
Translates to: WGRDWVTRSKRAAHA*GLDAVGLAGQQFLL
Trigger: GAGTAGGAATTGCTGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATCCCGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS CCA 90 bp GAGGGAGGGGAGAGGAGCACAAGCCGACCAATCCTAAAGCAACAGTaGCGAGGGCTGGGCCAATCGAAGGTCAAGGCTGGGAGGGTCCCG +
Preference number: 5 (lower is better)
Translates to: EGGERSTSRPILKQQ*RGLGQSKVKAGRVP
Trigger: CGGGACCCTCCCAGCCTTGACCTTCGATTGGCCCAGCCCTCGCCACTGTTGCTTTAGGATTGGTCGGCTTGTGCTCCTCTCCCCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS GCA 90 bp TTGGGTCACGCGTTCGAAGCGTGCCGCGCATGCGTGAGGTCTCGATaGCGTAGGGTTAGCTGGGCAGCAATTCCTACTCACTTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LGHAFEACRACVRSR*RRVSWAAIPTHFLG
Trigger: CCCCAGAAAGTGAGTAGGAATTGCTGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR CAA 90 bp CGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RGWETMHTSANTFPPTTSPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...GCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAACCGGGATATCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: EGCFSLDSLLWPKQEPGYPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...ATATCCCGGTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR CAA 90 bp CCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGGTAGAGGCAGGAGAATaGCATGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PSANTFPPTTSLDFLGRLVEAGE*HEPGRQ
Trigger: CTGCCTCCCAGGTTCATGCAATTCTCCTGCCTCTAC...CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CAA 90 bp AGCAAGCCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGGTGCTTGGAATGCCCTaGAAAAAGCTGCCTCACCTG +
Preference number: 5 (lower is better)
Translates to: SKPLGEHFSTHHELGLSGVLGMP*KKLPHL
Trigger: CAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCAC...CCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGGCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CAA 90 bp TGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACAAGAGCCGAACAGCCTaGGCAACAGTCTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: WETMHTSANTFPPTTSLDKSRTA*ATVFLG
Trigger: TCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCTT...GTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp AAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCGAGGGAAGGGACACCTaGGGATTCTCCATCACACCC +
Preference number: 5 (lower is better)
Translates to: KTGTWLGNHAHLGEHFSTEGRDT*GFSITP
Trigger: GGGTGTGATGGAGAATCCCAAGGTGTCCCTTCCCTC...GGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CAA 90 bp CAGGAGCAACAGCAGGAATGCGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCAAGCCCCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: QEQQQECAHQTCQKQAPRASPTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTGC...TCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp GTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAAGGATGCCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: VKCRASSANLDSEGVEGCPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...GCATCCTTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR CAA 90 bp ATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAGGATGTGAAAGCAGTTaGTTAACAGGGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: MHTSANTFPPTTSLDFLGGCESS*LTGPLA
Trigger: GGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GACAGTGAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGGTAGAGGCAGGAGAATaGCATGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: DSEGVEGCFSLDSLLWPKVEAGE*HEPGRQ
Trigger: CTGCCTCCCAGGTTCATGCAATTCTCCTGCCTCTAC...CTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp AGTTTGTTAACAGGGCCCCTGGCCGGGCCCAGAGGCTGTCAGACTCAGCAAGTACCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTC +
Preference number: 5 (lower is better)
Translates to: SLLTGPLAGPRGCQTQQVPGRFI*ATKPGF
Trigger: GAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGG...TACTTGCTGAGTCTGACAGCCTCTGGGCCCGGCCAGGGGCCCTGTTAACAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp AATGCGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTTGGACTTTCTGGGGCAAGCCCCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: NALIRHVRSKPHELGLSGASPTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGGGCTTGC...CCCAGAAAGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp TCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAACCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: STHHELGLSGKVVGFLVKPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...TTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGGTCACTCTGGTCCCCTaGAATGCCAAGGAACAGAAA +
Preference number: 5 (lower is better)
Translates to: RRTLFHPPRAWTFWEGCRVTLVP*NAKEQK
Trigger: TTTCTGTTCCTTGGCATTCAAGGGGACCAGAGTGAC...CCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463051.5
CDS-3UTR CAA 90 bp GCAAGCCCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGATTCAGAGTCCATGACTaGCTCTTGCCATGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: ASPSANTFPPTTSLDFLGFRVHD*LLPWEK
Trigger: CTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA...TCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CAA 90 bp GAGGGAGTAGAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAATGTATTCCCAGCTACTaGGGAGGTAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: EGVEGCFSLDSLLWPKQECIPSY*GGRGRR
Trigger: TCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATACA...TTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTCTACTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp GAAGGATGCTTCTCCCTGGACTCACTGCTGTGGCCTAAGCAGGAACCGGGATATGTGCTTGGAATGCCCTaGAAAAAGCTGCCTCACCTG +
Preference number: 5 (lower is better)
Translates to: EGCFSLDSLLWPKQEPGYVLGMP*KKLPHL
Trigger: CAGGTGAGGCAGCTTTTTCAAGGGCATTCCAAGCAC...ATATCCCGGTTCCTGCTTAGGCCACAGCAGTGAGTCCAGGGAGAAGCATCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CAA 90 bp CTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTC +
Preference number: 5 (lower is better)
Translates to: LGNHAHLGEHFSTHHELGPGRFI*ATKPGF
Trigger: GAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGG...TCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TTTGAAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCAAGAATTCCCGGATGTaGTCACCTGTGCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: FENRDVAGKPCTPRRTLFKNSRM*SPVLGS
Trigger: GGAGCCCAGCACAGGTGACAACATCCGGGAATTCTT...GAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: DVAGKPCTPRRTLFHPPRDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...TCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCCACCACGAGCTGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: VAGKPCTPRRTLFHPPRADFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...AGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACACCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: PTTSLDFLGRLSVFWSKTPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...TGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAGGATGTGAAAGCAGTTaGTTAACAGGGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKGCESS*LTGPLA
Trigger: GGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCGGATGTGAAAGCAGTTaGTTAACAGGGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: FSTHHELGLSGKVVGFLVGCESS*LTGPLA
Trigger: GGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC...GACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCTCCCCAGATAAGAGCCGAACAGCCTaGGCAACAGTCTTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LGIHHGPCDEGEMPSSPDKSRTA*ATVFLG
Trigger: TCCCAGGAAGACTGTTGCCAAGGCTGTTCGGCTCTT...ATCTGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp AAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATCTCCTGGGGGCGGGATaGGGTCACGCGTTCGAAGCG +
Preference number: 5 (lower is better)
Translates to: KQTQKPKVLEHGPNVPHHLLGAG*GHAFEA
Trigger: CGCTTCGAACGCGTGACCCAATCCCGCCCCCAGGAG...ATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS TCA 90 bp ACCATCAGGTGGGTCACCCTGGAGAAGGAGACTAAGAGACGACAGTaGAAGGAAAGGGCAGGCTGGACTCACACAATCATGCAGAACATC +
Preference number: 5 (lower is better)
Translates to: TIRWVTLEKETKRRQ*KERAGWTHTIMQNI
Trigger: GATGTTCTGCATGATTGTGTGAGTCCAGCCTGCCCTTTCCTTTCACTGTCGTCTCTTAGTCTCCTTCTCCAGGGTGACCCACCTGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461364.1
CDS-3UTR CAA 90 bp TGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCAAGAATTCCCGGATGTaGTCACCTGTGCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: WQQSSWEYITVLVMRVKCKNSRM*SPVLGS
Trigger: GGAGCCCAGCACAGGTGACAACATCCGGGAATTCTT...GCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGATGGACAAGAATTCCCGGATGTaGTCACCTGTGCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GQTTFCPLSFWGKHTGMDKNSRM*SPVLGS
Trigger: GGAGCCCAGCACAGGTGACAACATCCGGGAATTCTT...GTCCATCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GACCCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: DPRRTLFHPPRAWTFWEGDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...ACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593404.5
ENST00000600740.5
ENST00000602194.5
CDS-3UTR CAA 90 bp AGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGTATTCCCAGCTACTaGGGAGGTAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: RKLVSGGQVQSIFSQPGQCIPSY*GGRGRR
Trigger: TCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATACA...CTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp AAAACAGGGACGTGGCTGGGAAACCATGCACACCTCGGCGAACACTTTTCCACCGGAAAGGCAATCTGCTaGAGTTTTCTCAGCACAATC +
Preference number: 5 (lower is better)
Translates to: KTGTWLGNHAHLGEHFSTGKAIC*SFLSTI
Trigger: GATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTCC...GGTGGAAAAGTGTTCGCCGAGGTGTGCATGGTTTCCCAGCCACGTCCCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: GEHFSTHHELGLSGKVVGDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...ACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CCTCGGCGAACACTTTTCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: PRRTLFHPPRAWTFWEGCDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...ACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGAAAAGTGTTCGCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCACCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: FRVHDLLLPWEKARKLVSPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...TGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000598278.5
CDS-3UTR CAA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: HHELGLSGKVVGFLVKNIPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CGGGCGTTTCATTTTGGCAACAAAACCAGGATTCCCTTTCAAAGAAGCTTCTGGCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RAFHFGNKTRIPFQRSFWPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...CCAGAAGCTTCTTTGAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TGGACAGCAACCCCACATTCGGAGTCTCAATCACTCAGGACAGACAACTTTTTGGGATGTGAAAGCAGTTaGTTAACAGGGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: WTATPHSESQSLRTDNFLGCESS*LTGPLA
Trigger: GGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC...CAAAAAGTTGTCTGTCCTGAGTGATTGAGACTCCGAATGTGGGGTTGCTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTGGACAGTGAGGGAGTAGAATTCAGAGTCCATGACTaGCTCTTGCCATGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: QEVKCRASSANLDSEGVEFRVHD*LLPWEK
Trigger: CTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA...TTCTACTCCCTCACTGTCCAGGTTGGCTGAAGATGCTCTGCACTTGACCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CAA 90 bp AATGCGCTCATCAGACATGTCAGAAGCAAGCCCCACGAGCTTGGACTTTCTGGGTTCAGAGTCCATGACTaGCTCTTGCCATGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: NALIRHVRSKPHELGLSGFRVHD*LLPWEK
Trigger: CTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA...CCCAGAAAGTCCAAGCTCGTGGGGCTTGCTTCTGACATGTCTGATGAGCGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp TCCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAACCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTC +
Preference number: 5 (lower is better)
Translates to: STHHELGLSGKVVGFLVKPGRFI*ATKPGF
Trigger: GAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGG...TTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAATGCCATCCTCCCCACCTCACAAGCCTTCTTaGTTCCTAGGCAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: FLGIHHGPCDEGEMPSSPPHKPS*FLGKSH
Trigger: ATGAGACTTGCCTAGGAACAAAGAAGGCTTGTGAGG...TGGGGAGGATGGCATTTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CAA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGCCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGGAAACAAAGAATTCCCGGATGTaGTCACCTGTGCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GKFPLISPQLLHMSSVETKNSRM*SPVLGS
Trigger: GGAGCCCAGCACAGGTGACAACATCCGGGAATTCTT...TGTTTCCACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000599310.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CCACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: PPTTSLDFLGRLSVFWSKDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp ACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCATCAGACAGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: TATPCNSQEQQQECAHQTDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...TGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp TCACCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAACCACCCACCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SPTQKADSETQGFRTWSQPPTTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGTGG...TTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGGGATGTGAAAGCAGTTaGTTAACAGGGCCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLGCESS*LTGPLA
Trigger: GGCCAGGGGCCCTGTTAACAAACTGCTTTCACATCC...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp AAAGGCAAGGAAGTTAGTGTCAGGAGGTCAAGTGCAGAGCATCTTCAGCCAACCTTCAGAGTCCATGACTaGCTCTTGCCATGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: KGKEVSVRRSSAEHLQPTFRVHD*LLPWEK
Trigger: CTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA...GGTTGGCTGAAGATGCTCTGCACTTGACCTCCTGACACTAACTTCCTTGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CAA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGGTAGAGGCAGGAGAATaGCATGAACCTGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLVEAGE*HEPGRQ
Trigger: CTGCCTCCCAGGTTCATGCAATTCTCCTGCCTCTAC...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTTGTATTCCCAGCTACTaGGGAGGTAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: HHELGLSGKVVGFLVKNICIPSY*GGRGRR
Trigger: TCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATACA...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465250.6
ENST00000481671.6
CDS-3UTR CAA 90 bp AGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAAGCCAACTTTCTGCATaGAGACATCCTTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: RVHDLLLPWEKARKLVSGSQLSA*RHPCQG
Trigger: TCCCTGGCAAGGATGTCTCAATGCAGAAAGTTGGCT...TCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465250.6
CDS-3UTR CAA 90 bp GCCATCCTCCCCAGATCTCCTATGTCCTGGAAGCATCTTCGCAAACAGCCACTGTCAAAAGGACTCAGGTaGGAAATTGACTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: AILPRSPMSWKHLRKQPLSKGLR*EIDFLV
Trigger: AACCAAGAAGTCAATTTCCAACCTGAGTCCTTTTGA...CAGTGGCTGTTTGCGAAGATGCTTCCAGGACATAGGAGATCTGGGGAGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp ACCTTGGCAACAGTCTTCCTGGGAATACATCACGGTCCTTGTGATGAGGGTGAAGGAAAGGCAATCTGCTaGAGTTTTCTCAGCACAATC +
Preference number: 5 (lower is better)
Translates to: TLATVFLGIHHGPCDEGEGKAIC*SFLSTI
Trigger: GATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTCC...TTCACCCTCATCACAAGGACCGTGATGTATTCCCAGGAAGACTGTTGCCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CAA 90 bp ACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGCGCTCATCAGACATGTCAGGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: TPCNSQEQQQECAHQTCQDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...CTGACATGTCTGATGAGCGCATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp ACCCACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: THHELGLSGKVVGFLVKNDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...GTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000461488.5
ENST00000463051.5
ENST00000465250.6
ENST00000481671.6
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000598278.5
ENST00000600740.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp GGAAGTAGTTCAGAGTCCATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTTCAGAGTCCATGACTaGCTCTTGCCATGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: GSSSESMTCSCHGKRQGSFRVHD*LLPWEK
Trigger: CTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAA...ACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATGGACTCTGAACTACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CAA 90 bp ACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTCTTGTGTATTCCCAGCTACTaGGGAGGTAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: TSLDFLGRLSVFWSKTFLCIPSY*GGRGRR
Trigger: TCTCCTGCCTCTACCTCCCAAGTAGCTGGGAATACA...CAAGAATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp CTCAACAAGCAAATCACACAGTTGTGGGATTCAGCGCCAACCCCGGGCGTTTCATCAAAAGGACTCAGGTaGGAAATTGACTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LNKQITQLWDSAPTPGVSSKGLR*EIDFLV
Trigger: AACCAAGAAGTCAATTTCCAACCTGAGTCCTTTTGA...TGAAACGCCCGGGGTTGGCGCTGAATCCCACAACTGTGTGATTTGCTTGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TATTTAGGTACAACAAGGTCTTTTGTGCTTGGAATGCCCTTGAAAAAGCTGCCTAAGAATTCCCGGATGTaGTCACCTGTGCTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: YLGTTRSFVLGMPLKKLPKNSRM*SPVLGS
Trigger: GGAGCCCAGCACAGGTGACAACATCCGGGAATTCTT...AGGCAGCTTTTTCAAGGGCATTCCAAGCACAAAAGACCTTGTTGTACCTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481671.6
CDS-3UTR CAA 90 bp ACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGCATACAGGGAGGAAAGGCAATCTGCTaGAGTTTTCTCAGCACAATC +
Preference number: 5 (lower is better)
Translates to: TQDRQLFVLSLSGGSIQGGKAIC*SFLSTI
Trigger: GATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTCC...TCCCTGTATGCTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp AGGAATAGTCTTCCACAGCGACACCTTGTAATAGCCAGGAGCAACAGCAGGAATGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: RNSLPQRHLVIARSNSRNDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...ATTCCTGCTGTTGCTCCTGGCTATTACAAGGTGTCGCTGTGGAAGACTATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
CDS-3UTR CAA 90 bp CATGACTTGCTCTTGCCATGGGAAAAGGCAAGGAAGTTAGTGTCAGGAGGTCAAGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: HDLLLPWEKARKLVSGGQDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...TTGACCTCCTGACACTAACTTCCTTGCCTTTTCCCATGGCAAGAGCAAGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000465250.6
ENST00000481671.6
ENST00000594662.5
ENST00000597781.5
ENST00000598278.5
CDS-3UTR CAA 90 bp CACCACGAGCTTGGACTTTCTGGGAAGGTTGTCGGTTTTCTGGTCAAAAACATTAAGAATTCCCGGATGTaGTCACCTGTAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: HHELGLSGKVVGFLVKNIKNSRM*SPVIPA
Trigger: AGCTGGGATTACAGGTGACAACATCCGGGAATTCTT...AATGTTTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTCCAAGCTCGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461488.5
CDS-3UTR CAA 90 bp AGGCAGAGGAAAGTTTCCCTTAATATCCCCACAACTGCTCCACATGTCTTCTGTGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: RQRKVSLNIPTTAPHVFCDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...ACAGAAGACATGTGGAGCAGTTGTGGGGATATTAAGGGAAACTTTCCTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000602194.5
ENST00000627144.2
CDS-3UTR CAA 90 bp ACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCCCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTC +
Preference number: 5 (lower is better)
Translates to: TQKADSETQGFRTWSQCTPGRFI*ATKPGF
Trigger: GAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGG...GGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp TCACCTACTCAAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAACCCGGGCGTTTCATTTaGGCAACAAAACCAGGATTC +
Preference number: 5 (lower is better)
Translates to: SPTQKADSETQGFRTWSQPGRFI*ATKPGF
Trigger: GAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGG...TTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTTGAGTAGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000627144.2
CDS-3UTR CAA 90 bp CCCAAGGTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTAGCAGACCCACGAGCTaGGACTTTCTGGGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: PKVLEHGPNVPHHKITLISRPTS*DFLGRL
Trigger: CAACCTTCCCAGAAAGTCCAAGCTCGTGGGTCTGCT...AATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAACCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS-3UTR CAA 90 bp AGTCTCAATCACTCAGGACAGACAACTTTTTGTCCTCTCTCTTTCTGGGGGAAGTTTCATGTAAGTTCCTaGATCTCCTCACAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLNHSGQTTFCPLSFWGKFHVSS*ISSQAF
Trigger: GAAGGCTTGTGAGGAGATCAAGGAACTTACATGAAA...CTTCCCCCAGAAAGAGAGAGGACAAAAAGTTGTCTGTCCTGAGTGATTGAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358726.6
CDS-3UTR CAA 90 bp AAAGGAAACTCTACCACTGACTCTTTTCTTTCTCATGGCCTCCAAAATGAATCCGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: KGNSTTDSFLSHGLQNESDFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...GGATTCATTTTGGAGGCCATGAGAAAGAAAAGAGTCAGTGGTAGAGTTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487803.5
ENST00000627144.2
CDS-3UTR CAA 90 bp AAAAAGCAGACTCAGAAACCCAAGGTTTTAGAACATGGTCCCAATGTACCACATACCCTAGTTGAGCGGTaGGCAAATTTTTCTGGTAAG +
Preference number: 5 (lower is better)
Translates to: KKQTQKPKVLEHGPNVPHTLVER*ANFSGK
Trigger: CTTACCAGAAAAATTTGCCAACCGCTCAACTAGGGT...ATGTGGTACATTGGGACCATGTTCTAAAACCTTGGGTTTCTGAGTCTGCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593409.5
CDS-3UTR CAA 90 bp GTTTTAGAACATGGTCCCAATGTACCACATCATAAAATCACTCTCATTCCTGCAGACTTTCTGGGAAGGTaGTCGGTTTTCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: VLEHGPNVPHHKITLIPADFLGR*SVFWSK
Trigger: TTTTGACCAGAAAACCGACAACCTTCCCAGAAAGTC...TGCAGGAATGAGAGTGATTTTATGATGTGGTACATTGGGACCATGTTCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000487416.7
ENST00000487803.5
ENST00000593404.5
ENST00000593409.5
ENST00000597711.5
ENST00000599310.5
ENST00000627144.2
CDS CAA 72 bp CCAGAATGGGAGGAGCGGGGTCTCCTGGGGGCGGGATaGGGTCACGCGTTCGAAGCGTGCCGCGCATGCGTG +
Preference number: 6 (lower is better)
Translates to: PEWEERGLLGAG*GHAFEACRACV
Trigger: CACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATCCCGCCCCCAGGAGACCCCGCTCCTCCCATTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS GCA 72 bp CTCCTGGGGGCGGGATTGGGTCACGCGTTCGAAGCGTaGCGCGCATGCGTGAGGTCTCGATGCCGTAGGGTT +
Preference number: 6 (lower is better)
Translates to: LLGAGLGHAFEA*RACVRSRCRRV
Trigger: AACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATCCCGCCCCCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS GCA 72 bp GCGGGATTGGGTCACGCGTTCGAAGCGTGCCGCGCATaGGTGAGGTCTCGATGCCGTAGGGTTAGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: AGLGHAFEACRA*VRSRCRRVSWA
Trigger: TGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATCCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS TCA 72 bp GATTGGGTCACGCGTTCGAAGCGTGCCGCGCATGCGTaGGGTCTCGATGCCGTAGGGTTAGCTGGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: DWVTRSKRAAHA*GLDAVGLAGQQ
Trigger: TTGCTGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGCGTGACCCAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS GCA 72 bp GCGTTCGAAGCGTGCCGCGCATGCGTGAGGTCTCGATaGCGTAGGGTTAGCTGGGCAGCAATTCCTACTCAC +
Preference number: 6 (lower is better)
Translates to: AFEACRACVRSR*RRVSWAAIPTH
Trigger: GTGAGTAGGAATTGCTGCCCAGCTAACCCTACGGCATCGAGACCTCACGCATGCGCGGCACGCTTCGAACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS CCA 72 bp GAGAGGAGCACAAGCCGACCAATCCTAAAGCAACAGTaGCGAGGGCTGGGCCAATCGAAGGTCAAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: ERSTSRPILKQQ*RGLGQSKVKAG
Trigger: CCCAGCCTTGACCTTCGATTGGCCCAGCCCTCGCCACTGTTGCTTTAGGATTGGTCGGCTTGTGCTCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599310.5
CDS GCA 72 bp TCTTTTTCCGTTTACAAAGTGGCCCGACAGTGCGGGTaGAGGGCGGAAGGTCCGCGGTGGGGCTATTTCTTG +
Preference number: 6 (lower is better)
Translates to: SFSVYKVARQCG*RAEGPRWGYFL
Trigger: CAAGAAATAGCCCCACCGCGGACCTTCCGCCCTGCACCCGCACTGTCGGGCCACTTTGTAAACGGAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397349.6
CDS TCA 72 bp TTTCTTGGGGGATGGGGCTTAAGCTCTCCAGGAAGGTaGACAGAGGGACAACCAAGGAACGGAGAGTATGGG +
Preference number: 6 (lower is better)
Translates to: FLGGWGLSSPGR*TEGQPRNGEYG
Trigger: CCCATACTCTCCGTTCCTTGGTTGTCCCTCTGTTCACCTTCCTGGAGAGCTTAAGCCCCATCCCCCAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397349.6
CDS GCA 72 bp AGAGTTATGGCCCCAGTGCTAGATGGAAAGGCAATCTaGTTGAGTTTTCTCAGCACAATCATGCAGAACATC +
Preference number: 6 (lower is better)
Translates to: RVMAPVLDGKAI*LSFLSTIMQNI
Trigger: GATGTTCTGCATGATTGTGCTGAGAAAACTCAAGCAGATTGCCTTTCCATCTAGCACTGGGGCCATAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358726.6
ENST00000487803.5
ENST00000594507.5
ENST00000627144.2