RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMIM41 (Homo sapiens)

Ensembl gene IDs: ENSG00000284791

Ensembl transcript IDs: ENST00000546390.2

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCCGCTTCGGGTAAGGGGTCGGGACCGCAGCAGCCGTCGGGCATaGTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACC +
Preference number: 1 (lower is better)
Translates to: APLRVRGRDRSSRRA*SGPLGVRGCLEAAT
Trigger: GGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGGCTGCTGCGGTCCCGACCCCTTACCCGAAGCGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546390.2
3UTR CCA 90 bp TTCTTCTCTTCTCTCCTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTaGGGCGCGCCGCTTCGGGTAAGGGGTCGGGACCGCAGCAGCCGT +
Preference number: 1 (lower is better)
Translates to: FFSSLLSSSLLLLSV*GAPLRVRGRDRSSR
Trigger: ACGGCTGCTGCGGTCCCGACCCCTTACCCGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAGGAGAGAAGAGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
3UTR-3UTR CCA 90 bp GTGTGGGGCGCGCCGCTTCGGGTAAGGGGTCGGGACCGCAGCAGCCGTCGGGCAGAGTCAGGGGCTGCCTaGAGGCCGCGACCACCGAGC +
Preference number: 2 (lower is better)
Translates to: VWGAPLRVRGRDRSSRRAESGAA*RPRPPS
Trigger: GCTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTC...TGCCCGACGGCTGCTGCGGTCCCGACCCCTTACCCGAAGCGGCGCGCCCCACAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546390.2
3UTR GCA 72 bp CGTCGGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTaGCTGGAGGCCGCGACCACCGAGCGCAGCCGGGCG +
Preference number: 3 (lower is better)
Translates to: RRACSGPLGVRG*LEAATTERSRA
Trigger: CGCCCGGCTGCGCTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
3UTR GCA 72 bp CGGGTAAGGGGTCGGGACCGCAGCAGCCGTCGGGCATaGTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: RVRGRDRSSRRA*SGPLGVRGCLE
Trigger: CTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGGCTGCTGCGGTCCCGACCCCTTACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546390.2
3UTR CCA 72 bp TCTCTCCTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTaGGGCGCGCCGCTTCGGGTAAGGGGTCGGGACCGC +
Preference number: 3 (lower is better)
Translates to: SLLSSSLLLLSV*GAPLRVRGRDR
Trigger: GCGGTCCCGACCCCTTACCCGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAGGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR TCA 90 bp GCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACCACCGAGGCCGCGGCGCCCGCCTaGGAGCCGTTCATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACSGPLGVRGCLEAATTEAAAPA*EPFMLQ
Trigger: CTGGAGCATGAACGGCTCTCAGGCGGGCGCCGCGGC...CTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR GCA 90 bp GGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACCACCGATGCTCCAGCGCCGGCTaGCCAGATGTGGCGGGATCG +
Preference number: 4 (lower is better)
Translates to: GMLRTARSQGLPGGRDHRCSSAG*PDVAGS
Trigger: CGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCA...TCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR GCA 90 bp GGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACCACCGAAGCAGCCGTCGGGCATaGTCCGGACCGCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GMLRTARSQGLPGGRDHRSSRRA*SGPLGV
Trigger: GACTCCGAGCGGTCCGGAGCATGCCCGACGGCTGCT...TCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR CCA 90 bp GTGTGGGGCGCGCCGCTTCGGGTAAGGGGTCGGGACCGCAGCAGCCGTCGGGCACCGGCTGCCCAGATGTaGCGGGATCGCCAGATGTGC +
Preference number: 4 (lower is better)
Translates to: VWGAPLRVRGRDRSSRRAPAAQM*RDRQMC
Trigger: GCACATCTGGCGATCCCGCCACATCTGGGCAGCCGG...TGCCCGACGGCTGCTGCGGTCCCGACCCCTTACCCGAAGCGGCGCGCCCCACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR CCA 90 bp GCCGTCGGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGAGGCGGCGACGCCGACTaGTTACAGCAGGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVGHAPDRSESGAAWRPRGGDAD*LQQELS
Trigger: GCTGAGCTCCTGCTGTAACCAGTCGGCGTCGCCGCC...TCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR GCA 90 bp GCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACCACCGAGCCTGAGAGCCGTTCATaGTCCAGCGCCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ACSGPLGVRGCLEAATTEPESRS*SSAGCP
Trigger: TGGGCAGCCGGCGCTGGAGCATGAACGGCTCTCAGG...CTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR CCA 90 bp GCCGTCGGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACTTCTCCTCTCTGTGTaGGGCGCGCCGCTTCGGGTA +
Preference number: 4 (lower is better)
Translates to: AVGHAPDRSESGAAWRPRLLLSV*GAPLRV
Trigger: TACCCGAAGCGGCGCGCCCCACACAGAGAGGAGAAG...TCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR TCA 90 bp CCGTCGGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTGGAGGCCGCGACCCGTTCTGGATCCTCTaGGGTTCTCTTCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PSGMLRTARSQGLPGGRDPFWIL*GSLLSS
Trigger: AGAGGAGAGAAGAGAACCTCAGAGGATCCAGAACGG...GTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR GCA 90 bp TTCTCTCCTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTGGGGCGCGCCGCTTCGTCGCGGGACGCGCGCTaGTCGCGGGTCAGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: FSPLLFSSSPLCVGRAASSRDAR*SRVSSA
Trigger: AGCGCTGCTGACCCGCGAGCAGCGCGCGTCCCGCGA...CGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAGGAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR GCA 90 bp CTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTGGGGCGCGCCGCTTCGGGTAAGGCTCGGAGTCAGGGGCTaGCTGGAGGCCGCGACCACC +
Preference number: 4 (lower is better)
Translates to: LSSSLLLLSVWGAPLRVRLGVRG*LEAATT
Trigger: GGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAG...CCTTACCCGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR CCA 90 bp TTCTCTCCTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTGGGGCGCGCCGCTTCGCGCCGTCCTCTCCGCTaGCACTGCCCGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FSPLLFSSSPLCVGRAASRRPLR*HCPARA
Trigger: AGCCCGAGCCGGGCAGTGCCAGCGGAGAGGACGGCG...CGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAGGAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR CCA 90 bp CTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTGGGGCGCGCCGCTTCGGGTAAGGGAGTCAGGGGCTGCCTaGAGGCCGCGACCACCGAGC +
Preference number: 4 (lower is better)
Translates to: LSSSLLLLSVWGAPLRVRESGAA*RPRPPS
Trigger: GCTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTC...CCTTACCCGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS-3UTR GCA 90 bp CTCTCCTCTTCTCTTCTTCTCCTCTCTGTGTGGGGCGCGCCGCTTCGGGTAAGGCGGGATCGCCAGATGTaGAGGAGCCCAGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSSLLLLSVWGAPLRVRRDRQM*RSPDWR
Trigger: CCGCCAGTCTGGGCTCCTGCACATCTGGCGATCCCG...CCTTACCCGAAGCGGCGCGCCCCACACAGAGAGGAGAAGAAGAGAAGAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS CCA 90 bp GAGCGCAGCCGGGCGCCTAGGAGTCGTCGTCGCCGTCCTCTCCGCTaGCACTGCCCGGCTCGGGCTCGCGGGACGCGCGCTGCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: ERSRAPRSRRRRPLR*HCPARARGTRAARG
Trigger: CCCGCGAGCAGCGCGCGTCCCGCGAGCCCGAGCCGGGCAGTGCCAGCGGAGAGGACGGCGACGACGACTCCTAGGCGCCCGGCTGCGCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 90 bp TCCTCTCCGCTGGCACTGCCCGGCTCGGGCTCGCGGGACGCGCGCTaGTCGCGGGTCAGCAGCGCTGTCAGGCCCTGGGCGCGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSPLALPGSGSRDAR*SRVSSAVRPWARRR
Trigger: CCTCCTCCGCGCCCAGGGCCTGACAGCGCTGCTGACCCGCGAGCAGCGCGCGTCCCGCGAGCCCGAGCCGGGCAGTGCCAGCGGAGAGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 90 bp AGCCGGGCGCCTAGGAGTCGTCGTCGCCGTCCTCTCCGCTGGCACTaGCCGGCTCGGGCTCGCGGGACGCGCGCTGCTCGCGGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SRAPRSRRRRPLRWH*PARARGTRAARGSA
Trigger: TGCTGACCCGCGAGCAGCGCGCGTCCCGCGAGCCCGAGCCGGGCAGTGCCAGCGGAGAGGACGGCGACGACGACTCCTAGGCGCCCGGCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 90 bp CGCAGCAGCCGTCGGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTaGCTGGAGGCCGCGACCACCGAGCGCAGCCGGGCGCCTAGGAGT +
Preference number: 5 (lower is better)
Translates to: RSSRRACSGPLGVRG*LEAATTERSRAPRS
Trigger: ACTCCTAGGCGCCCGGCTGCGCTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGGCTGCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS CCA 90 bp GCAGCCGTCGGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTaGAGGCCGCGACCACCGAGCGCAGCCGGGCGCCTAGGAGTCGTC +
Preference number: 5 (lower is better)
Translates to: AAVGHAPDRSESGAA*RPRPPSAAGRLGVV
Trigger: GACGACTCCTAGGCGCCCGGCTGCGCTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCCGACGGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 90 bp TCAGCCAGGCGGCCTGAGCCGCGGCGCCCGCCTGAGAGCCGTTCATaGTCCAGCGCCGGCTGCCCAGATGTGGCGGGATCGCCAGATGTG +
Preference number: 5 (lower is better)
Translates to: SARRPEPRRPPESRS*SSAGCPDVAGSPDV
Trigger: CACATCTGGCGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCATGAACGGCTCTCAGGCGGGCGCCGCGGCTCAGGCCGCCTGGCTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS CCA 90 bp GCCCGCCTGAGAGCCGTTCATGCTCCAGCGCCGGCTGCCCAGATGTaGCGGGATCGCCAGATGTGCAGGAGCCCAGACTGGCGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: ARLRAVHAPAPAAQM*RDRQMCRSPDWRAG
Trigger: GCCCGCCCGCCAGTCTGGGCTCCTGCACATCTGGCGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCATGAACGGCTCTCAGGCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 90 bp GAGCCGCGGCGCCCGCCTGAGAGCCGTTCATGCTCCAGCGCCGGCTaGCCAGATGTGGCGGGATCGCCAGATGTGCAGGAGCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: EPRRPPESRSCSSAG*PDVAGSPDVQEPRL
Trigger: CAGTCTGGGCTCCTGCACATCTGGCGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCATGAACGGCTCTCAGGCGGGCGCCGCGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 72 bp CTGGCACTGCCCGGCTCGGGCTCGCGGGACGCGCGCTaGTCGCGGGTCAGCAGCGCTGTCAGGCCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: LALPGSGSRDAR*SRVSSAVRPWA
Trigger: CGCCCAGGGCCTGACAGCGCTGCTGACCCGCGAGCAGCGCGCGTCCCGCGAGCCCGAGCCGGGCAGTGCCAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 72 bp CCTAGGAGTCGTCGTCGCCGTCCTCTCCGCTGGCACTaGCCGGCTCGGGCTCGCGGGACGCGCGCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: PRSRRRRPLRWH*PARARGTRAAR
Trigger: GCGAGCAGCGCGCGTCCCGCGAGCCCGAGCCGGGCAGTGCCAGCGGAGAGGACGGCGACGACGACTCCTAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS CCA 72 bp GGGCATGCTCCGGACCGCTCGGAGTCAGGGGCTGCCTaGAGGCCGCGACCACCGAGCGCAGCCGGGCGCCTA +
Preference number: 6 (lower is better)
Translates to: GHAPDRSESGAA*RPRPPSAAGRL
Trigger: TAGGCGCCCGGCTGCGCTCGGTGGTCGCGGCCTCCAGGCAGCCCCTGACTCCGAGCGGTCCGGAGCATGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 72 bp CGGCCTGAGCCGCGGCGCCCGCCTGAGAGCCGTTCATaGTCCAGCGCCGGCTGCCCAGATGTGGCGGGATCG +
Preference number: 6 (lower is better)
Translates to: RPEPRRPPESRS*SSAGCPDVAGS
Trigger: CGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCATGAACGGCTCTCAGGCGGGCGCCGCGGCTCAGGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS GCA 72 bp CGCCCGCCTGAGAGCCGTTCATGCTCCAGCGCCGGCTaGCCAGATGTGGCGGGATCGCCAGATGTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: RPPESRSCSSAG*PDVAGSPDVQE
Trigger: CTCCTGCACATCTGGCGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCATGAACGGCTCTCAGGCGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2
CDS CCA 72 bp AGAGCCGTTCATGCTCCAGCGCCGGCTGCCCAGATGTaGCGGGATCGCCAGATGTGCAGGAGCCCAGACTGG +
Preference number: 6 (lower is better)
Translates to: RAVHAPAPAAQM*RDRQMCRSPDW
Trigger: CCAGTCTGGGCTCCTGCACATCTGGCGATCCCGCCACATCTGGGCAGCCGGCGCTGGAGCATGAACGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546390.2