Pregenerated sensors for SMIM40 (Homo sapiens)
Ensembl gene IDs: ENSG00000286920Ensembl transcript IDs: ENST00000494082.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTaGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCGGATGGGCGA | + |
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Preference number: 1 (lower is better) Translates to: SSPEGVLEGPSVLTR*PCFVVGGLGSADGR Trigger: TCGCCCATCCGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR TCA 90 bp | TGGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCGGATGGGCGATaGTGGGGTGGGGCTTGGAGGAGAGTTTGTGCAAATTGCCGCTGC | + |
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Preference number: 1 (lower is better) Translates to: WPCFVVGGLGSADGR*WGGAWRRVCANCRC Trigger: GCAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCACCCCATCATCGCCCATCCGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR CCA 90 bp | CTTTGTCGTGGGAGGCCTAGGGTCTGCGGATGGGCGATGATGGGGTaGGGCTTGGAGGAGAGTTTGTGCAAATTGCCGCTGCGAGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LCRGRPRVCGWAMMG*GLEESLCKLPLRGL Trigger: CAGCCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCACCCCATCATCGCCCATCCGCAGACCCTAGGCCTCCCACGACAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR TCA 90 bp | TCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGTTGGGACCTaGATGGTTCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: SSFTTELMTSQTVGT*MVLLQRGSSKGRLC Trigger: GCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR CCA 90 bp | TTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGTTaGGACCTGAATGGTTCTTCTCCAGAGGGGGTCCTCGAAGGGCCG | + |
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Preference number: 1 (lower is better) Translates to: LLFKLHHRTNDQPDR*DLNGSSPEGVLEGP Trigger: CGGCCCTTCGAGGACCCCCTCTGGAGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGTGGGCGATGATGGGGTaGGGCTTGGAGGAGAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GPRRAVCADQVAVLCRGRWAMMG*GLEESL Trigger: CAAACTCTCCTCCAAGCCCCACCCCATCATCGCCCA...CCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTGCTTGGAGGAGAGTTTGTaGAAATTGCCGCTGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSPEGVLEGPSVLTRWPCLEESL*KLPLRG Trigger: CCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAA...GCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR CAA 90 bp | AGGGTCTGCGGATGGGCGATGATGGGGTGGGGCTTGGAGGAGAGTTaGTGCAAATTGCCGCTGCGAGGGCTGCTCGTTGTGTTTAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RVCGWAMMGWGLEES*CKLPLRGLLVVFRE Trigger: CTCCCTAAACACAACGAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCACCCCATCATCGCCCATCCGCAGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR GCA 90 bp | GACCTGAATGGTTCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGAGTTTGTGCAAATTaGCGCTGCGAGGGCTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: DLNGSSPEGVLEGPSVLTRVCAN*RCEGCS Trigger: CGAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCT...GGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGAACCATTCAGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR TCA 90 bp | CACAGAACTAATGACCAGCCAGACCGTTGGGACCTGAATGGTTCTTCTCCAGAGGGCTGGGTCCAGAGGTaGGCTCCTTGGTGGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: HRTNDQPDRWDLNGSSPEGWVQR*APWWGK Trigger: CTTTCCCCACCAAGGAGCTCACCTCTGGACCCAGCC...CTCTGGAGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCACCACAGAACTAATGACCAGCCAGACCGTTGGGACCTGAATGGTTCTTCTCCTAGGGTCTGCGGATaGGCGATGATGGGGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LHHRTNDQPDRWDLNGSSPRVCG*AMMGWG Trigger: GCCCCACCCCATCATCGCCCATCCGCAGACCCTAGG...AGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR GCA 90 bp | GATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGTTGGGACGGGAGGCCTAGGGTCTaGGGATGGGCGATGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: DLLFKLHHRTNDQPDRWDGRPRV*GWAMMG Trigger: CCCCATCATCGCCCATCCGCAGACCCTAGGCCTCCC...GTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGGCTGGAGGGACTCGTaGAGGCAAGGCTGGGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LLLICFSSFTTELMTSQTGWRDS*RQGWVQ Trigger: CTGGACCCAGCCTTGCCTCCACGAGTCCCTCCAGCC...GGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR GCA 90 bp | GATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGTTGGGACTGTGCAAATTGCCGCTaGGAGGGCTGCTCGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DLLFKLHHRTNDQPDRWDCANCR*EGCSLC Trigger: ACACAACGAGCAGCCCTCGCAGCGGCAATTTGCACA...GTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR CCA 72 bp | GAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTaGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCG | + |
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Preference number: 3 (lower is better) Translates to: EGVLEGPSVLTR*PCFVVGGLGSA Trigger: CGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR GCA 72 bp | GTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTaGTTTGTCGTGGGAGGCCTAGGGTCTGCGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: VLEGPSVLTRWP*FVVGGLGSADG Trigger: CCCATCCGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTGGAGAGTTTGTGCAAATaGCCGCTGCGAGGGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: FFSRGGPRRAVCADQVAVESLCK*PLRGLL Trigger: GAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCTC...CACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CAA 90 bp | GGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGGGCTTGGAGGAGAGTTaGTGCAAATTGCCGCTGCGA | + |
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Preference number: 3 (lower is better) Translates to: GPRRAVCADQVAVLCRGRGLEES*CKLPLR Trigger: TCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCC...CCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR CCA 72 bp | GGGAGGCCTAGGGTCTGCGGATGGGCGATGATGGGGTaGGGCTTGGAGGAGAGTTTGTGCAAATTGCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: GRPRVCGWAMMG*GLEESLCKLPL Trigger: CAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCACCCCATCATCGCCCATCCGCAGACCCTAGGCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGCCAGAGGTGAGCTCCTaGGTGGGGAAAGAAGATGTT | + |
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Preference number: 3 (lower is better) Translates to: GSSPEGVLEGPSVLTRWPPEVSS*VGKEDV Trigger: AACATCTTCTTTCCCCACCAAGGAGCTCACCTCTGG...CGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR TCA 72 bp | TTTGTCGTGGGAGGCCTAGGGTCTGCGGATGGGCGATaGTGGGGTGGGGCTTGGAGGAGAGTTTGTGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: FVVGGLGSADGR*WGGAWRRVCAN Trigger: ATTTGCACAAACTCTCCTCCAAGCCCCACCCCATCATCGCCCATCCGCAGACCCTAGGCCTCCCACGACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR TCA 72 bp | ACCACAGAACTAATGACCAGCCAGACCGTTGGGACCTaGATGGTTCTTCTCCAGAGGGGGTCCTCGAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: TTELMTSQTVGT*MVLLQRGSSKG Trigger: GCCCTTCGAGGACCCCCTCTGGAGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCTGCGAGGGCTGCTCGTaGTGTTTAGGGAGGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLLICFSSFTTELMTSQTCEGCS*CLGRLE Trigger: CTCCAGCCTCCCTAAACACAACGAGCAGCCCTCGCA...GGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR TCA 90 bp | CCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCGGGCTGGGTCCAGAGGTaGGCTCCTTGGTGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: PSVLTRWPCFVVGGLGSAGWVQR*APWWGK Trigger: CTTTCCCCACCAAGGAGCTCACCTCTGGACCCAGCC...CGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR GCA 90 bp | CCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCGTGTGCAAATTGCCGCTaGGAGGGCTGCTCGTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSVLTRWPCFVVGGLGSACANCR*EGCSLC Trigger: ACACAACGAGCAGCCCTCGCAGCGGCAATTTGCACA...CGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR TCA 90 bp | TGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCGGATGGCAGACCGTTGGGACCTaGATGGTTCTTCTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CADQVAVLCRGRPRVCGWQTVGT*MVLLQR Trigger: CCTCTGGAGAAGAACCATTCAGGTCCCAACGGTCTG...CCATCCGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR GCA 90 bp | GGTTCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTTGGAGGAGAGTTTGTaGAAATTGCCGCTGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSSPEGVLEGPSVLTRWPLEESL*KLPLRG Trigger: CCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAA...CGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR GCA 90 bp | GTGGGGCTTGGAGGAGAGTTTGTGCAAATTGCCGCTGCGAGGGCTGCTCGTTGTGGGACCCTGGGCAAATaGCAGGAACACATCCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VGLGGEFVQIAAARAARCGTLGK*QEHIRL Trigger: GAGGCGGATGTGTTCCTGGCATTTGCCCAGGGTCCC...ACAACGAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR GCA 90 bp | GTGGGGCTTGGAGGAGAGTTTGTGCAAATTGCCGCTGCGAGGGCTGCTCGTTGTAGAGTTTGTGCAAATTaGCGCTGCGAGGGCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VGLGGEFVQIAAARAARCRVCAN*RCEGCS Trigger: CGAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCT...ACAACGAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR TCA 90 bp | CTTCACCACAGAACTAATGACCAGCCAGACCGTTGGGACCTGAATGGTTCTTCTAAGGGCCGTCTGTGCTaGCCAGGTGGCCGTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LHHRTNDQPDRWDLNGSSKGRLC*PGGRAL Trigger: CAAAGCACGGCCACCTGGTCAGCACAGACGGCCCTT...AGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR GCA 90 bp | GTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGTGGGAGGCCTAGGGTCTaGGGATGGGCGATGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: VADLLFKLHHRTNDQPDRGRPRV*GWAMMG Trigger: CCCCATCATCGCCCATCCGCAGACCCTAGGCCTCCC...ACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR GCA 90 bp | GTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGTCTGACCAGGTGGCCGTaGTTTGTCGTGGGAGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: VADLLFKLHHRTNDQPDRLTRWP*FVVGGL Trigger: TAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAG...ACGGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR TCA 90 bp | ACTATTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCATCTGCGGATGGGCGATaGTGGGGTGGGGCTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TIVADLLFKLHHRTNDQPSADGR*WGGAWR Trigger: CCTCCAAGCCCCACCCCATCATCGCCCATCCGCAGA...TGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAACAATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR CAA 90 bp | TCTTCTCCAGAGGGGGTCCTCGAAGGGCCGTCTGTGCTGACCAGGTGGCCGTGCGGCTTGGAGGAGAGTTaGTGCAAATTGCCGCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: SSPEGVLEGPSVLTRWPCGLEES*CKLPLR Trigger: TCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCC...GCACGGCCACCTGGTCAGCACAGACGGCCCTTCGAGGACCCCCTCTGGAGAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR CAA 90 bp | CCGTCTGTGCTGACCAGGTGGCCGTGCTTTGTCGTGGGAGGCCTAGGGTCTGCGCCAGAGGTGAGCTCCTaGGTGGGGAAAGAAGATGTT | + |
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Preference number: 5 (lower is better) Translates to: PSVLTRWPCFVVGGLGSAPEVSS*VGKEDV Trigger: AACATCTTCTTTCCCCACCAAGGAGCTCACCTCTGG...CGCAGACCCTAGGCCTCCCACGACAAAGCACGGCCACCTGGTCAGCACAGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR CAA 90 bp | GTGGGGCTTGGAGGAGAGTTTGTGCAAATTGCCGCTGCGAGGGCTGCTCGTTGTGAGAGTTTGTGCAAATaGCCGCTGCGAGGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VGLGGEFVQIAAARAARCESLCK*PLRGLL Trigger: GAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCTC...ACAACGAGCAGCCCTCGCAGCGGCAATTTGCACAAACTCTCCTCCAAGCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR CAA 90 bp | CACAGAACTAATGACCAGCCAGACCGTTGGGACCTGAATGGTTCTTCTCCAGAGTGCGAGGGCTGCTCGTaGTGTTTAGGGAGGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: HRTNDQPDRWDLNGSSPECEGCS*CLGRLE Trigger: CTCCAGCCTCCCTAAACACAACGAGCAGCCCTCGCA...CTCTGGAGAAGAACCATTCAGGTCCCAACGGTCTGGCTGGTCATTAGTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR CAA 90 bp | TTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACCAGCCAGACCGCCAGTCCCCTAACTTaGCCCATAGTAGTAACCACA | + |
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Preference number: 5 (lower is better) Translates to: LLLICFSSFTTELMTSQTASPLT*PIVVTT Trigger: TGTGGTTACTACTATGGGCAAAGTTAGGGGACTGGC...GGTCTGGCTGGTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS-3UTR CAA 90 bp | GTTATTACTATTGTTGCTGATTTGCTTTTCAAGCTTCACCACAGAACTAATGACACTATTGTTGCTGATTaGCTTTTCAAGCTTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: VITIVADLLFKLHHRTNDTIVAD*LFKLHH Trigger: GTGGTGAAGCTTGAAAAGCAAATCAGCAACAATAGT...GTCATTAGTTCTGTGGTGAAGCTTGAAAAGCAAATCAGCAACAATAGTAATAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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| CDS CAA 90 bp | GCTCCTCCTCCTTCTGAGGTGTCCCCAGGAGCCAGTCCCCTAACTTaGCCCATAGTAGTAACCACAGCAGCTTATAAGCAGCCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: APPPSEVSPGASPLT*PIVVTTAAYKQPPA Trigger: TGCTGGAGGCTGCTTATAAGCTGCTGTGGTTACTACTATGGGCAAAGTTAGGGGACTGGCTCCTGGGGACACCTCAGAAGGAGGAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494082.3 |
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