Pregenerated sensors for SMIM4 (Homo sapiens)
Ensembl gene IDs: ENSG00000168273Ensembl transcript IDs: ENST00000307106.3, ENST00000476842.1, ENST00000477703.6, ENST00000482728.1, ENST00000491607.5
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGTGGCTaGAGGTTGGCGACTGTGTCTTCATCAAGTCCCATGGCCTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: QVATTLSSSITMTCG*RLATVSSSSPMAWC Trigger: GCACCAGGCCATGGGACTTGATGAAGACACAGTCGCCAACCTTCAGCCACATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR CCA 90 bp | GAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGTaGCTGAAGGTTGGCGACTGTGTCTTCATCAAGTCCCATGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: EPGCHYFEQLHYNDM*LKVGDCVFIKSHGL Trigger: CAGGCCATGGGACTTGATGAAGACACAGTCGCCAACCTTCAGCCACATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR GCA 90 bp | GAAAAAGAAGATGTCCCTGTGGAAATGTCCAATGGTGAACCAGGTTaGCACTACTTTGAGCAGCTCCATTACAATGACATGTGGCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: EKEDVPVEMSNGEPG*HYFEQLHYNDMWLK Trigger: CTTCAGCCACATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGACATCTTCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR CCA 90 bp | AGCTCAAGTCTGGGATGCTTTATACTGTGTAGGTTCACTTTCTCATaGAAGGAGCAACTGTTTCTAGCAGCTGAATCGAACAGCAACATC | + |
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Preference number: 1 (lower is better) Translates to: SSSLGCFILCRFTFS*KEQLFLAAESNSNI Trigger: GATGTTGCTGTTCGATTCAGCTGCTAGAAACAGTTGCTCCTTCCATGAGAAAGTGAACCTACACAGTATAAAGCATCCCAGACTTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR CCA 90 bp | TCTTCAGCCAGTTTTCTTTACAACAGGAAAAAGAAGATGTCCCTGTaGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SSASFLYNRKKKMSL*KCPMVNQVATTLSS Trigger: GCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGACATCTTCTTTTTCCTGTTGTAAAGAAAACTGGCTGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR TCA 90 bp | GCCAAGCAAGGGAGGAGCATATTTCTGTTCACAAGAACACTAGCATaGGAAATGCGTAGTCAATCAAGAATTTCCACCACCCTAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: AKQGRSIFLFTRTLA*EMRSQSRISTTLAK Trigger: TTTTGCTAGGGTGGTGGAAATTCTTGATTGACTACGCATTTCTCATGCTAGTGTTCTTGTGAACAGAAATATGCTCCTCCCTTGCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR TCA 90 bp | CTTACACTGGGTCAGATTGCCAAATCACTCAATAGACTGAGCCTCTaGTTTAGCTCAAGTCTGGGATGCTTTATACTGTGTAGGTTCACT | + |
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Preference number: 1 (lower is better) Translates to: LTLGQIAKSLNRLSL*FSSSLGCFILCRFT Trigger: AGTGAACCTACACAGTATAAAGCATCCCAGACTTGAGCTAAATCAGAGGCTCAGTCTATTGAGTGATTTGGCAATCTGACCCAGTGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR TCA 90 bp | TGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTaGTCCAAACTTACACTGGGTCAGATTGCCAAATCACTCAATAGA | + |
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Preference number: 1 (lower is better) Translates to: CGYASMERYLLFLPG*SKLTLGQIAKSLNR Trigger: TCTATTGAGTGATTTGGCAATCTGACCCAGTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR TCA 90 bp | GATCCAAACTTACACTGGGTCAGATTGCCAAATCACTCAATAGACTaGGCCTCTGATTTAGCTCAAGTCTGGGATGCTTTATACTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: DPNLHWVRLPNHSID*ASDLAQVWDALYCV Trigger: TACACAGTATAAAGCATCCCAGACTTGAGCTAAATCAGAGGCTCAGTCTATTGAGTGATTTGGCAATCTGACCCAGTGTAAGTTTGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTTCAAGTCCCATGGCCTaGTGCGTCCTCGTGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LWKCPMVNQVATTLSSSISSPMA*CVLVWA Trigger: TGCCCACACGAGGACGCACCAGGCCATGGGACTTGA...AATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACAGTGCTGTCCAGCAGTaGCTTGGGAAGTACTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: MQAWKGICFFYQADPNLHSAVQQ*LGKYSS Trigger: GCTTGAGTACTTCCCAAGTCACTGCTGGACAGCACT...GTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCCCTGATGGCAGAGGTCATTACTGGCCTTTCACATTCAAGCCATCTCCCCCTAAAAACAAAGATTaGCGAAAACAATTCGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PLPDGRGHYWPFTFKPSPPKNKD*RKQFGL Trigger: AAGCCCGAATTGTTTTCGGCAATCTTTGTTTTTAGG...GGGAGATGGCTTGAATGTGAAAGGCCAGTAATGACCTCTGCCATCAGGGAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACCATCCTAGAGTAGTGTaGAACCTGTTGCCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: MQAWKGICFFYQADPNLHHPRVV*NLLPTV Trigger: GACTGTGGGCAACAGGTTTCACACTACTCTAGGATG...GTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR CCA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGGATTTAGCTCAAGTCTaGGATGCTTTATACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLDLAQV*DALYCV Trigger: TACACAGTATAAAGCATCCCAGACTTGAGCTAAATC...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACAATAGACTGAGCCTCTaGTTTAGCTCAAGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: MQAWKGICFFYQADPNLHNRLSL*FSSSLG Trigger: TCCCAGACTTGAGCTAAATCAGAGGCTCAGTCTATT...GTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR TCA 90 bp | GTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACTGGGTCAGATTGCCAAACAAGAACACTAGCATaGGAAATGCGTAGTCAATCA | + |
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Preference number: 2 (lower is better) Translates to: VSAFSTRLIQTYTGSDCQTRTLA*EMRSQS Trigger: TGATTGACTACGCATTTCTCATGCTAGTGTTCTTGT...TTGGCAATCTGACCCAGTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATACTGTTTCTAGCAGCTaGATCGAACAGCAACATCTT | + |
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Preference number: 2 (lower is better) Translates to: LDVAMQAWKGICFFYQADTVSSS*IEQQHL Trigger: AAGATGTTGCTGTTCGATTCAGCTGCTAGAAACAGT...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACAATCACTCAATAGACTaGGCCTCTGATTTAGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: MQAWKGICFFYQADPNLHNHSID*ASDLAQ Trigger: TTGAGCTAAATCAGAGGCTCAGTCTATTGAGTGATT...GTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR-3UTR GCA 90 bp | ATACCCTATGGCCTTAAGCATCAGCTTTATTCTCATGCAATAGTTAGAAACTATAGCTCAAGTCTGGGATaGTTTATACTGTGTAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: IPYGLKHQLYSHAIVRNYSSSLG*FILCRF Trigger: GAACCTACACAGTATAAAGCATCCCAGACTTGAGCT...ATAGTTTCTAACTATTGCATGAGAATAAAGCTGATGCTTAAGGCCATAGGGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR CCA 72 bp | TGCCACTACTTTGAGCAGCTCCATTACAATGACATGTaGCTGAAGGTTGGCGACTGTGTCTTCATCAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: CHYFEQLHYNDM*LKVGDCVFIKS Trigger: GGACTTGATGAAGACACAGTCGCCAACCTTCAGCCACATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR-3UTR CAA 90 bp | GGAATCCTAGATGACACAACTGGGCATGAGAATACGATGAACCACCGTCCTCTCGCAGAGATCATTAACTaGAGGATACCCTATGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: GILDDTTGHENTMNHRPLAEIIN*RIPYGL Trigger: AAGGCCATAGGGTATCCTCAAGTTAATGATCTCTGC...GAGAGGACGGTGGTTCATCGTATTCTCATGCCCAGTTGTGTCATCTAGGATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR GCA 72 bp | GATGTCCCTGTGGAAATGTCCAATGGTGAACCAGGTTaGCACTACTTTGAGCAGCTCCATTACAATGACATG | + |
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Preference number: 3 (lower is better) Translates to: DVPVEMSNGEPG*HYFEQLHYNDM Trigger: CATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| 3UTR TCA 72 bp | CACTTTCTCATGGAAGGAGCAACTGTTTCTAGCAGCTaGATCGAACAGCAACATCTTCATCCTAGAGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: HFLMEGATVSSS*IEQQHLHPRVV Trigger: CACTACTCTAGGATGAAGATGTTGCTGTTCGATTCAGCTGCTAGAAACAGTTGCTCCTTCCATGAGAAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR TCA 72 bp | GCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTaGTCCAAACTTACACTGGGTCAGATTGCCAAATCA | + |
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Preference number: 3 (lower is better) Translates to: ASMERYLLFLPG*SKLTLGQIAKS Trigger: TGATTTGGCAATCTGACCCAGTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR TCA 72 bp | GGTCAGATTGCCAAATCACTCAATAGACTGAGCCTCTaGTTTAGCTCAAGTCTGGGATGCTTTATACTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GQIAKSLNRLSL*FSSSLGCFILC Trigger: ACACAGTATAAAGCATCCCAGACTTGAGCTAAATCAGAGGCTCAGTCTATTGAGTGATTTGGCAATCTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR TCA 72 bp | TTACACTGGGTCAGATTGCCAAATCACTCAATAGACTaGGCCTCTGATTTAGCTCAAGTCTGGGATGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: LHWVRLPNHSID*ASDLAQVWDAL Trigger: TAAAGCATCCCAGACTTGAGCTAAATCAGAGGCTCAGTCTATTGAGTGATTTGGCAATCTGACCCAGTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR CCA 72 bp | TTGCTTGAAACGATGTTAGATGTGGCTATGCAAGCATaGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCA | + |
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Preference number: 3 (lower is better) Translates to: LLETMLDVAMQA*KGICFFYQADP Trigger: TGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAACATCGTTTCAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR TCA 90 bp | TTGGCGACTGTGTCTTCATCAAGTCCCATGGCCTGGTGCGTCCTCGTGTGGGCATCACCTGGGCCCTGGTaGACATGCTCGACCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LATVSSSSPMAWCVLVWASPGPW*TCSTEV Trigger: GACCTCGGTCGAGCATGTTCACCAGGGCCCAGGTGA...TGCCCACACGAGGACGCACCAGGCCATGGGACTTGATGAAGACACAGTCGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR GCA 90 bp | TTGGCGACTGTGTCTTCATCAAGTCCCATGGCCTGGTGCGTCCTCGTGTGGGCATTCCCGGGCACCCGCTaGAGAATCCGTCTCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LATVSSSSPMAWCVLVWAFPGTR*RIRLTW Trigger: CCAGGTGAGACGGATTCTGCAGCGGGTGCCCGGGAA...TGCCCACACGAGGACGCACCAGGCCATGGGACTTGATGAAGACACAGTCGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR CCA 90 bp | CCTCTCCCTGATGGCAGAGGTCATTACTGGCCTTTCACATTCAAGCCATCTCCCCCGTGTACCGCGACCTaGGAGACTAGCGAGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: PLPDGRGHYWPFTFKPSPPCTAT*ETSERR Trigger: ACGGCGCTCGCTAGTCTCCCAGGTCGCGGTACACGG...GGGAGATGGCTTGAATGTGAAAGGCCAGTAATGACCTCTGCCATCAGGGAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR TCA 90 bp | GATGGCAGAGGTCATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCACCTGGGCCCTGGTaGACATGCTCGACCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: DGRGHYWPFTFKPSPSCDSPGPW*TCSTEV Trigger: GACCTCGGTCGAGCATGTTCACCAGGGCCCAGGTGA...GTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAATGACCTCTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR CCA 90 bp | ATGTCCCTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCCCGTGTACCGCGACCTaGGAGACTAGCGAGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: MSLWKCPMVNQVATTLSSPCTAT*ETSERR Trigger: ACGGCGCTCGCTAGTCTCCCAGGTCGCGGTACACGG...GCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR TCA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGGCCATCTCCCAGCTGTaGCTCTGGGCTTGCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLAISQL*LWACCT Trigger: AGTGCAGCAAGCCCAGAGTCACAGCTGGGAGATGGC...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR TCA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGCCACCGTCCTCTCCCTaGTGGCAGAGGTCATTACTG | + |
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Preference number: 4 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLPPSSP*WQRSLL Trigger: CAGTAATGACCTCTGCCATCAGGGAGAGGACGGTGG...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| 3UTR CAA 72 bp | AACCTGTTGCCCACAGTCCTCATGAAGATCCAGCCCTaGCAGTTTAGGGGAGCCAAGCAAGGGAGGAGCATA | + |
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Preference number: 4 (lower is better) Translates to: NLLPTVLMKIQP*QFRGAKQGRSI Trigger: TATGCTCCTCCCTTGCTTGGCTCCCCTAAACTGCAAGGGCTGGATCTTCATGAGGACTGTGGGCAACAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR GCA 90 bp | AGTAGTGTGAAACCTGTTGCCCACAGTCCTCATGAAGATCCAGCCCTTGCAGTTGCAGGAACCGGTAGATaGCAAATCGCTGCTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: SSVKPVAHSPHEDPALAVAGTGR*QIAASR Trigger: CCGGGAAGCAGCGATTTGGCATCTACCGGTTCCTGC...AACTGCAAGGGCTGGATCTTCATGAGGACTGTGGGCAACAGGTTTCACACTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR CCA 90 bp | TGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAGACGGAACTAAGCACTaGATCGCCCGGACGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: WKCPMVNQVATTLSSSITDGTKH*IARTQP Trigger: CGGCTGCGTCCGGGCGATCCAGTGCTTAGTTCCGTC...TGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR GCA 90 bp | CTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTGCAGGAACCGGTAGATaGCAAATCGCTGCTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LWKCPMVNQVATTLSSSIAGTGR*QIAASR Trigger: CCGGGAAGCAGCGATTTGGCATCTACCGGTTCCTGC...AATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR CCA 90 bp | CCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGTTCAAGTCCCATGGCCTaGTGCGTCCTCGTGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PMVNQVATTLSSSITMTCSSPMA*CVLVWA Trigger: TGCCCACACGAGGACGCACCAGGCCATGGGACTTGA...ACATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR GCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATTTCCCGGGCACCCGCTaGAGAATCCGTCTCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LDVAMQAWKGICFFYQADFPGTR*RIRLTW Trigger: CCAGGTGAGACGGATTCTGCAGCGGGTGCCCGGGAA...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR CCA 90 bp | CTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTAGAATCCGTCTCACCTaGGCCCTGGTGAACATGCTC | + |
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Preference number: 4 (lower is better) Translates to: LWKCPMVNQVATTLSSSIRIRLT*ALVNML Trigger: GAGCATGTTCACCAGGGCCCAGGTGAGACGGATTCT...AATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR TCA 90 bp | ATGTCCCTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCGCAGCTCCATTACAATaGCATGTGGCTGAAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: MSLWKCPMVNQVATTLSSAAPLQ*HVAEGW Trigger: CCAACCTTCAGCCACATGTCATTGTAATGGAGCTGC...GCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR GCA 90 bp | GTCCCTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCAATGGTGAACCAGGTTaGCACTACTTTGAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VPVEMSNGEPGCHYFEQLNGEPG*HYFEQL Trigger: GAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATT...GAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR CCA 90 bp | TGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACACTTCATCAAGTCCCATaGCCTGGTGCGTCCTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: WKCPMVNQVATTLSSSITLHQVP*PGASSC Trigger: ACACGAGGACGCACCAGGCCATGGGACTTGATGAAG...TGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
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| CDS-3UTR TCA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGAATAGACTGAGCCTCTaGTTTAGCTCAAGTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLNRLSL*FSSSLG Trigger: TCCCAGACTTGAGCTAAATCAGAGGCTCAGTCTATT...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR TCA 90 bp | GGAATCCTAGATGACACAACTGGGCATGAGAATACGATGAACCACCGTCCTCTCCTGATACTGTCTTTCTaGGGCTTTTCTACGGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: GILDDTTGHENTMNHRPLLILSF*GFSTVD Trigger: GTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAG...GAGAGGACGGTGGTTCATCGTATTCTCATGCCCAGTTGTGTCATCTAGGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR TCA 90 bp | CCTCTCCCTGATGGCAGAGGTCATTACTGGCCTTTCACATTCAAGCCATCTCCCACAAGAACACTAGCATaGGAAATGCGTAGTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: PLPDGRGHYWPFTFKPSPTRTLA*EMRSQS Trigger: TGATTGACTACGCATTTCTCATGCTAGTGTTCTTGT...GGGAGATGGCTTGAATGTGAAAGGCCAGTAATGACCTCTGCCATCAGGGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
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| CDS-3UTR TCA 90 bp | TCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACATGACAATGACATGTGGCTaGAGGTTGGCGACTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNGEPGCHYFEQLHYNDMTMTCG*RLATVS Trigger: AGACACAGTCGCCAACCTTCAGCCACATGTCATTGT...CATGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS-3UTR TCA 90 bp | CTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTGGAAATGTCCAATGGTaGACCAGGTTGCCACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LWKCPMVNQVATTLSSSIGNVQW*TRLPLL Trigger: AAGTAGTGGCAACCTGGTTCACCATTGGACATTTCC...AATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS-3UTR CCA 90 bp | CAGCTCCATTACAATGACATGTGGCTGAAGGTTGGCGACTGTGTCTTCATCAAGCATGTGGCTGAAGGTTaGCGACTGTGTCTTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLHYNDMWLKVGDCVFIKHVAEG*RLCLHQ Trigger: TTGATGAAGACACAGTCGCCAACCTTCAGCCACATG...CTTGATGAAGACACAGTCGCCAACCTTCAGCCACATGTCATTGTAATGGAGCTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGTGGAAATGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCAAGAAGATGTCCCTGTaGAAATGTCCAATGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPVEMSNGEPGCHYFEQLKKMSL*KCPMVN Trigger: GTTCACCATTGGACATTTCCACAGGGACATCTTCTT...GAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACATTTCCACAGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS-3UTR TCA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGGACTTTATTGACTGCTaGAGTTCAGTCTCATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLDFIDC*SSVSFI Trigger: GATGAATGAGACTGAACTTCAGCAGTCAATAAAGTC...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR TCA 90 bp | AGTAGTGTGAAACCTGTTGCCCACAGTCCTCATGAAGATCCAGCCCTTGCAGTTACTGTTTCTAGCAGCTaGATCGAACAGCAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSVKPVAHSPHEDPALAVTVSSS*IEQQHL Trigger: AAGATGTTGCTGTTCGATTCAGCTGCTAGAAACAGT...AACTGCAAGGGCTGGATCTTCATGAGGACTGTGGGCAACAGGTTTCACACTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR GCA 90 bp | AGTAGTGTGAAACCTGTTGCCCACAGTCCTCATGAAGATCCAGCCCTTGCAGTTGCATGGAAAGGTATCTaGTTTTTCTACCAGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVKPVAHSPHEDPALAVAWKGI*FFYQAD Trigger: ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGC...AACTGCAAGGGCTGGATCTTCATGAGGACTGTGGGCAACAGGTTTCACACTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CCA 90 bp | ATACCCTATGGCCTTAAGCATCAGCTTTATTCTCATGCAATAGTTAGAAACTATGACGGAACTAAGCACTaGATCGCCCGGACGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IPYGLKHQLYSHAIVRNYDGTKH*IARTQP Trigger: CGGCTGCGTCCGGGCGATCCAGTGCTTAGTTCCGTC...ATAGTTTCTAACTATTGCATGAGAATAAAGCTGATGCTTAAGGCCATAGGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CCA 90 bp | TACTTTGAGCAGCTCCATTACAATGACATGTGGCTGAAGGTTGGCGACTGTGTCCATTACAATGACATGTaGCTGAAGGTTGGCGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFEQLHYNDMWLKVGDCVHYNDM*LKVGDC Trigger: ACAGTCGCCAACCTTCAGCCACATGTCATTGTAATG...GACACAGTCGCCAACCTTCAGCCACATGTCATTGTAATGGAGCTGCTCAAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS-3UTR TCA 90 bp | TGTCCAATGGTGAACCAGGTTGCCACTACTTTGAGCAGCTCCATTACAATGACAGCAGGTGAGTGTCATTaGATTAGGGAAGATGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPMVNQVATTLSSSITMTAGECH*IREDEV Trigger: AACCTCATCTTCCCTAATTCAATGACACTCACCTGC...TGTCATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTGGTTCACCATTGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS-3UTR GCA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGCCTAAAAACAAAGATTaGCGAAAACAATTCGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLPKNKD*RKQFGL Trigger: AAGCCCGAATTGTTTTCGGCAATCTTTGTTTTTAGG...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR TCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATTCTTCCAGCCTTCTCTaGTACTGTCTTTCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDVAMQAWKGICFFYQADSSSLL*YCLSEA Trigger: AGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGA...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR TCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCTTTTTCTACCAGGCTaGTCCAAACTTACACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDVAMQAWKGICFFYQADLFLPG*SKLTLG Trigger: ACCCAGTGTAAGTTTGGATCAGCCTGGTAGAAAAAG...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR TCA 90 bp | ATACCCTATGGCCTTAAGCATCAGCTTTATTCTCATGCAATAGTTAGAAACTATGGCATGAGAATACGATaGACCACCGTCCTCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPYGLKHQLYSHAIVRNYGMRIR*TTVLSL Trigger: CAGGGAGAGGACGGTGGTTCATCGTATTCTCATGCC...ATAGTTTCTAACTATTGCATGAGAATAAAGCTGATGCTTAAGGCCATAGGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR GCA 90 bp | CATCGAGTGAGTGTTTTAGGAGGAAATAATTTTCCCACAAGTGCTGTCCAGCAGAGCTCAAGTCTGGGATaGTTTATACTGTGTAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRVSVLGGNNFPTSAVQQSSSLG*FILCRF Trigger: GAACCTACACAGTATAAAGCATCCCAGACTTGAGCT...CTGCTGGACAGCACTTGTGGGAAAATTATTTCCTCCTAAAACACTCACTCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CCA 90 bp | CATCGAGTGAGTGTTTTAGGAGGAAATAATTTTCCCACAAGTGCTGTCCAGCAGGTGGCTATGCAAGCATaGAAAGGTATCTGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRVSVLGGNNFPTSAVQQVAMQA*KGICFF Trigger: GAAAAAGCAGATACCTTTCCATGCTTGCATAGCCAC...CTGCTGGACAGCACTTGTGGGAAAATTATTTCCTCCTAAAACACTCACTCGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR TCA 90 bp | ATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACCAGAGATCATTAACTTaGGGATACCCTATGGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MQAWKGICFFYQADPNLHQRSLT*GYPMAL Trigger: TAAGGCCATAGGGTATCCTCAAGTTAATGATCTCTG...GTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATGATCCAAACTTACACTaGGTCAGATTGCCAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDVAMQAWKGICFFYQADDPNLH*VRLPNH Trigger: GTGATTTGGCAATCTGACCCAGTGTAAGTTTGGATC...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR TCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATAATCACTCAATAGACTaGGCCTCTGATTTAGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDVAMQAWKGICFFYQADNHSID*ASDLAQ Trigger: TTGAGCTAAATCAGAGGCTCAGTCTATTGAGTGATT...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CCA 90 bp | TTAGATGTGGCTATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATGATTTAGCTCAAGTCTaGGATGCTTTATACTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LDVAMQAWKGICFFYQADDLAQV*DALYCV Trigger: TACACAGTATAAAGCATCCCAGACTTGAGCTAAATC...ATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCATAGCCACATCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| 3UTR CAA 72 bp | AAATTAGGAGACATGTTTGTGGCAGAGATCATTAACTaGAGGATACCCTATGGCCTTAAGCATCAGCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KLGDMFVAEIIN*RIPYGLKHQLY Trigger: ATAAAGCTGATGCTTAAGGCCATAGGGTATCCTCAAGTTAATGATCTCTGCCACAAACATGTCTCCTAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS CCA 90 bp | ACGCAGCCGAGACCGCCCCGCCCGTTCTCGCCGTGTACCGCGACCTaGGAGACTAGCGAGCGCCGTCCTCCGCCACTGTCTGGTAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TQPRPPRPFSPCTAT*ETSERRPPPLSGRR Trigger: GCGCCTACCAGACAGTGGCGGAGGACGGCGCTCGCTAGTCTCCCAGGTCGCGGTACACGGCGAGAACGGGCGGGGCGGTCTCGGCTGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307106.3 ENST00000476842.1 ENST00000477703.6 |
||
| CDS CCA 90 bp | CCTGAAAGACAGCGCGGCCACCTCAGAAAACAACGCGCGCCCAGCTaGCTCCCCTCCGACAGGGCCCACGGCTACTGGGTCGGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PERQRGHLRKQRAPS*LPSDRAHGYWVGLL Trigger: GAGGAGGCCGACCCAGTAGCCGTGGGCCCTGTCGGAGGGGAGCCAGCTGGGCGCGCGTTGTTTTCTGAGGTGGCCGCGCTGTCTTTCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS CCA 90 bp | ATGCTCGACCGAGGTCGTGGAGAGGGATATGACGGAACTAAGCACTaGATCGCCCGGACGCAGCCGAGACCGCCCCGCCCGTTCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: MLDRGRGEGYDGTKH*IARTQPRPPRPFSP Trigger: CGGCGAGAACGGGCGGGGCGGTCTCGGCTGCGTCCGGGCGATCCAGTGCTTAGTTCCGTCATATCCCTCTCCACGACCTCGGTCGAGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307106.3 ENST00000476842.1 ENST00000477703.6 |
||
| CDS TCA 90 bp | GCTTCCCGGGCACCCGCTGCAGAATCCGTCTCACCTGGGCCCTGGTaGACATGCTCGACCGAGGTCGTGGAGAGGGATATGACGGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: ASRAPAAESVSPGPW*TCSTEVVERDMTEL Trigger: TAGTTCCGTCATATCCCTCTCCACGACCTCGGTCGAGCATGTTCACCAGGGCCCAGGTGAGACGGATTCTGCAGCGGGTGCCCGGGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476842.1 ENST00000477703.6 |
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| CDS CCA 90 bp | CCAAATCGCTGCTTCCCGGGCACCCGCTGCAGAATCCGTCTCACCTaGGCCCTGGTGAACATGCTCGACCGAGGTCGTGGAGAGGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: PNRCFPGTRCRIRLT*ALVNMLDRGRGEGY Trigger: ATATCCCTCTCCACGACCTCGGTCGAGCATGTTCACCAGGGCCCAGGTGAGACGGATTCTGCAGCGGGTGCCCGGGAAGCAGCGATTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476842.1 ENST00000477703.6 |
||
| CDS TCA 90 bp | ACCCTGAGCACAGCCTGGTATGCGTGCGGGCTCGGAATACGGATCTaGGCAGAAGAAATGCGAGTGGAGAGCGGTTCTGCGCAGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLSTAWYACGLGIRI*AEEMRVESGSAQER Trigger: TCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCCCGCACGCATACCAGGCTGTGCTCAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS CCA 90 bp | CCAGGCCATGGACTGCCACACTGTAGGTCTTCAATCAAGGTTCAGTaGAGTTTCGAATGTACACACACCCCGTCGCGCTCCGGCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGHGLPHCRSSIKVQ*SFECTHTPSRSGCL Trigger: GAGACAGCCGGAGCGCGACGGGGTGTGTGTACATTCGAAACTCCACTGAACCTTGATTGAAGACCTACAGTGTGGCAGTCCATGGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491607.5 |
||
| CDS-3UTR CAA 90 bp | TGGCGACTGTGTCTTCATCAAGTCCCATGGCCTGGTGCGTCCTCGTGTGGGCAGCAGGTTGCCACTACTTaGAGCAGCTCCATTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: WRLCLHQVPWPGASSCGQQVATT*SSSITM Trigger: CATTGTAATGGAGCTGCTCAAAGTAGTGGCAACCTG...CTGCCCACACGAGGACGCACCAGGCCATGGGACTTGATGAAGACACAGTCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS TCA 90 bp | GGTCTTCAATCAAGGTTCAGTGGAGTTTCGAATGTACACACACCCTaGAAGACAGCGCGGCCACCTCAGAAAACAACGCGCGCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLQSRFSGVSNVHTP*KTARPPQKTTRAQL Trigger: CAGCTGGGCGCGCGTTGTTTTCTGAGGTGGCCGCGCTGTCTTTCAGGGTGTGTGTACATTCGAAACTCCACTGAACCTTGATTGAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS GCA 90 bp | CCTGGTATGCGTGCGGGCTCGGAATACGGATCTGAGCAGAAGAAATaGGAGTGGAGAGCGGTTCTGCGCAGGAAAGAGGAATTTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGMRAGSEYGSEQKK*EWRAVLRRKEEFCW Trigger: CCAACAAAATTCCTCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCCCGCACGCATACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS CCA 90 bp | ATGCGTGCGGGCTCGGAATACGGATCTGAGCAGAAGAAATGCGAGTaGAGAGCGGTTCTGCGCAGGAAAGAGGAATTTTGTTGGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MRAGSEYGSEQKKCE*RAVLRRKEEFCWKA Trigger: GGCTTTCCAACAAAATTCCTCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCCCGCACGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS-3UTR CAA 90 bp | AGTAGTGTGAAACCTGTTGCCCACAGTCCTCATGAAGATCCAGCCCTTGCAGTTATGAAGATCCAGCCCTaGCAGTTTAGGGGAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVKPVAHSPHEDPALAVMKIQP*QFRGAK Trigger: CTTGGCTCCCCTAAACTGCAAGGGCTGGATCTTCAT...AACTGCAAGGGCTGGATCTTCATGAGGACTGTGGGCAACAGGTTTCACACTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS TCA 90 bp | AGTTCAGTCTCATTCATCTTCCAGCCTTCTCTGATACTGTCTTTCTaGGGCTTTTCTACGGTAGACATCATCAGTCCCCAGGCCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSVSFIFQPSLILSF*GFSTVDIISPQAMD Trigger: GTCCATGGCCTGGGGACTGATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGAGACTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000482728.1 ENST00000491607.5 |
||
| CDS-3UTR CAA 90 bp | ATTACTGGCCTTTCACATTCAAGCCATCTCCCAGCTGTGACTCTGGGCTTGCTGTTACACTGGGTCAGATaGCCAAATCACTCAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ITGLSHSSHLPAVTLGLLLHWVR*PNHSID Trigger: GTCTATTGAGTGATTTGGCAATCTGACCCAGTGTAA...CAGCAAGCCCAGAGTCACAGCTGGGAGATGGCTTGAATGTGAAAGGCCAGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CAA 90 bp | TACTTTGAGCAGCTCCATTACAATGACATGTGGCTGAAGGTTGGCGACTGTGTCTTAGGGAAGATGAGGTaGAATAGAAGGTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YFEQLHYNDMWLKVGDCVLGKMR*NRRSPG Trigger: GCCAGGAGACCTTCTATTCAACCTCATCTTCCCTAA...GACACAGTCGCCAACCTTCAGCCACATGTCATTGTAATGGAGCTGCTCAAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476842.1 |
||
| CDS TCA 90 bp | AGTTCAGTCTCATTCATCTTCCAGCCTTCTCTGATACTGTCTTTCTaGGGCTTTTCTACGGTAGACATCATCTGGGCCCTGGTGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: SSVSFIFQPSLILSF*GFSTVDIIWALVNM Trigger: CATGTTCACCAGGGCCCAGATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGAGACTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307106.3 |
||
| CDS TCA 90 bp | AGTTCAGTCTCATTCATCTTCCAGCCTTCTCTGATACTGTCTTTCTaGGGCTTTTCTACGGTAGACATCATAGAAGGTCTCCTGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSVSFIFQPSLILSF*GFSTVDIIEGLLAH Trigger: GTGGGCCAGGAGACCTTCTATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGAGACTGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS-3UTR CAA 90 bp | ATGCAAGCATGGAAAGGTATCTGCTTTTTCTACCAGGCTGATCCAAACTTACACGCAGAGATCATTAACTaGAGGATACCCTATGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MQAWKGICFFYQADPNLHAEIIN*RIPYGL Trigger: AAGGCCATAGGGTATCCTCAAGTTAATGATCTCTGC...GTGTAAGTTTGGATCAGCCTGGTAGAAAAAGCAGATACCTTTCCATGCTTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477703.6 |
||
| CDS CCA 72 bp | AGACCGCCCCGCCCGTTCTCGCCGTGTACCGCGACCTaGGAGACTAGCGAGCGCCGTCCTCCGCCACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPPRPFSPCTAT*ETSERRPPPLS Trigger: AGACAGTGGCGGAGGACGGCGCTCGCTAGTCTCCCAGGTCGCGGTACACGGCGAGAACGGGCGGGGCGGTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307106.3 ENST00000476842.1 ENST00000477703.6 |
||
| CDS CCA 72 bp | CAGCGCGGCCACCTCAGAAAACAACGCGCGCCCAGCTaGCTCCCCTCCGACAGGGCCCACGGCTACTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QRGHLRKQRAPS*LPSDRAHGYWV Trigger: GACCCAGTAGCCGTGGGCCCTGTCGGAGGGGAGCCAGCTGGGCGCGCGTTGTTTTCTGAGGTGGCCGCGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS CCA 72 bp | CGAGGTCGTGGAGAGGGATATGACGGAACTAAGCACTaGATCGCCCGGACGCAGCCGAGACCGCCCCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RGRGEGYDGTKH*IARTQPRPPRP Trigger: CGGGCGGGGCGGTCTCGGCTGCGTCCGGGCGATCCAGTGCTTAGTTCCGTCATATCCCTCTCCACGACCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307106.3 ENST00000476842.1 ENST00000477703.6 |
||
| CDS CCA 72 bp | TGCTTCCCGGGCACCCGCTGCAGAATCCGTCTCACCTaGGCCCTGGTGAACATGCTCGACCGAGGTCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CFPGTRCRIRLT*ALVNMLDRGRG Trigger: TCCACGACCTCGGTCGAGCATGTTCACCAGGGCCCAGGTGAGACGGATTCTGCAGCGGGTGCCCGGGAAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000476842.1 ENST00000477703.6 |
||
| CDS TCA 72 bp | ACAGCCTGGTATGCGTGCGGGCTCGGAATACGGATCTaGGCAGAAGAAATGCGAGTGGAGAGCGGTTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TAWYACGLGIRI*AEEMRVESGSA Trigger: CGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCCCGCACGCATACCAGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS TCA 72 bp | TCAAGGTTCAGTGGAGTTTCGAATGTACACACACCCTaGAAGACAGCGCGGCCACCTCAGAAAACAACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRFSGVSNVHTP*KTARPPQKTTR Trigger: GCGCGTTGTTTTCTGAGGTGGCCGCGCTGTCTTTCAGGGTGTGTGTACATTCGAAACTCCACTGAACCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS CCA 72 bp | GGCTCGGAATACGGATCTGAGCAGAAGAAATGCGAGTaGAGAGCGGTTCTGCGCAGGAAAGAGGAATTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSEYGSEQKKCE*RAVLRRKEEFC Trigger: ACAAAATTCCTCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTCTTCTGCTCAGATCCGTATTCCGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482728.1 |
||
| CDS CAA 90 bp | GAAATGCGAGTGGAGAGCGGTTCTGCGCAGGAAAGAGGAATTTTGTaGGAAAGCCTGTCGACGTTGCTAGAAAAGACCACAGCATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: EMRVESGSAQERGIL*ESLSTLLEKTTASH Trigger: GTGAGATGCTGTGGTCTTTTCTAGCAACGTCGACAGGCTTTCCAACAAAATTCCTCTTTCCTGCGCAGAACCGCTCTCCACTCGCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482728.1 |
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| CDS TCA 72 bp | TCATTCATCTTCCAGCCTTCTCTGATACTGTCTTTCTaGGGCTTTTCTACGGTAGACATCATCTGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SFIFQPSLILSF*GFSTVDIIWAL Trigger: CAGGGCCCAGATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307106.3 |
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| CDS TCA 72 bp | TCATTCATCTTCCAGCCTTCTCTGATACTGTCTTTCTaGGGCTTTTCTACGGTAGACATCATCAGTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SFIFQPSLILSF*GFSTVDIISPQ Trigger: CTGGGGACTGATGATGTCTACCGTAGAAAAGCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000482728.1 ENST00000491607.5 |
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