Pregenerated sensors for SMIM34B (Homo sapiens)
Ensembl gene IDs: ENSG00000278961Ensembl transcript IDs: ENST00000624951.1, ENST00000643357.1, ENST00000646133.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAGGATCTCATTGGTTCACAAACTGAAAAACTCCAGTGGTAAATaGAGGCTCTGGGTACAGTTGGTACAGGCTCTGGTCTCTGTAATT | + |
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Preference number: 1 (lower is better) Translates to: KRISLVHKLKNSSGK*RLWVQLVQALVSVI Trigger: AATTACAGAGACCAGAGCCTGTACCAACTGTACCCAGAGCCTTCATTTACCACTGGAGTTTTTCAGTTTGTGAACCAATGAGATCCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR TCA 90 bp | AGGATGAGACTTGCTGGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCACAGGTTCTTAGTCACAGGGTaGGACAGGAGGCCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RMRLAGLHSRRVGILSHRFLVTG*DRRPAG Trigger: TCCTGCTGGCCTCCTGTCTCACCCTGTGACTAAGAA...CCTGTGACTAAGAATGCCTACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAATTCTTAGTCACAGGGTaGGACAGGAGGCCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GFLHGGKMDPAILSEVFEFLVTG*DRRPAG Trigger: TCCTGCTGGCCTCCTGTCTCACCCTGTGACTAAGAA...TTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCGGCTCTGGGTACAGTTaGTACAGGCTCTGGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSGSGYS*YRLWSL Trigger: CAGAGACCAGAGCCTGTACCAACTGTACCCAGAGCC...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTCCCTTCTAGATGCTGGGTTTTTGCCTTCAAGTTGGCTTTCTTCATGGGAGGATGAGACTTGCTaGACTGCATTCCAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FFSLLDAGFLPSSWLSSWEDETC*TAFQEG Trigger: ACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCTC...CCATGAAGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAGAAGGGAGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR CCA 90 bp | AGGATGAGACTTGCTGGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCACAGGTTCATGGTGGCAAAATaGATCCAGCAATTCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: RMRLAGLHSRRVGILSHRFMVAK*IQQFCQ Trigger: CTGACAGAATTGCTGGATCCATTTTGCCACCATGAA...CCTGTGACTAAGAATGCCTACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR GCA 90 bp | GGTACAGTTGGTACAGGCTCTGGTCTCTGTAATTTCCTAGTTCTTCTCCCTTCTAATGAGGATGAGACTTaGTGGACTGCATTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GTVGTGSGLCNFLVLLPSNEDET*WTAFQE Trigger: CTCCTGGAATGCAGTCCAGCAAGTCTCATCCTCATT...AGAAGGGAGAAGAACTAGGAAATTACAGAGACCAGAGCCTGTACCAACTGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR CCA 90 bp | AGGATGAGACTTGCTGGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCACAGGTTTTTGCCTTCAAGTTaGCTTTCTTCATGGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RMRLAGLHSRRVGILSHRFLPSS*LSSWWQ Trigger: TTGCCACCATGAAGAAAGCCAACTTGAAGGCAAAAA...CCTGTGACTAAGAATGCCTACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCCATTGGTTCACAAACTaGAAAACTCCAGTGGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSHWFTN*KTPVVN Trigger: ATTTACCACTGGAGTTTTTCAGTTTGTGAACCAATG...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR TCA 72 bp | TCATTGGTTCACAAACTGAAAAACTCCAGTGGTAAATaGAGGCTCTGGGTACAGTTGGTACAGGCTCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: SLVHKLKNSSGK*RLWVQLVQALV Trigger: GACCAGAGCCTGTACCAACTGTACCCAGAGCCTTCATTTACCACTGGAGTTTTTCAGTTTGTGAACCAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCCTAGATGCTGGGTTTTaGCCTTCAAGTTGGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSLDAGF*PSSWLS Trigger: AGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAG...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | GGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCACAGGGTGAGACAGGAGGCCTTCTTAGTCACAGGGTaGGACAGGAGGCCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GLHSRRVGILSHRVRQEAFLVTG*DRRPAG Trigger: TCCTGCTGGCCTCCTGTCTCACCCTGTGACTAAGAA...GGCCTCCTGTCTCACCCTGTGACTAAGAATGCCTACCCTCCTGGAATGCAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | GGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCACAGGGTGAGACAGGAGGCCAGTTGGCTTTCTTCATaGTGGCAAAATGGATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLHSRRVGILSHRVRQEASWLSS*WQNGSS Trigger: GCTGGATCCATTTTGCCACCATGAAGAAAGCCAACT...GGCCTCCTGTCTCACCCTGTGACTAAGAATGCCTACCCTCCTGGAATGCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | AGGCCAGCAGGATTGATATCACAAGACACAGGTCACAAAGACCCTGTCCAAGTTGGCTCTGGGTACAGTTaGTACAGGCTCTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RPAGLISQDTGHKDPVQVGSGYS*YRLWSL Trigger: CAGAGACCAGAGCCTGTACCAACTGTACCCAGAGCC...AACTTGGACAGGGTCTTTGTGACCTGTGTCTTGTGATATCAATCCTGCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643357.1 |
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| CDS-3UTR GCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCAGGTCACAAAGACCCTaGAGGCAGCGCTGGTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSRSQRP*RQRWFR Trigger: ACGGAACCAGCGCTGCCTGCAGGGTCTTTGTGACCT...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | GGTACAGTTGGTACAGGCTCTGGTCTCTGTAATTTCCTAGTTCTTCTCCCTTCTGGAGGCCAGCAGGATTaGTATCACAAGACACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GTVGTGSGLCNFLVLLPSGGQQD*YHKTQV Trigger: GACCTGTGTCTTGTGATATCAATCCTGCTGGCCTCC...AGAAGGGAGAAGAACTAGGAAATTACAGAGACCAGAGCCTGTACCAACTGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | AGCTGCTCAGTTTATGTGACTCCCCAGAAGTTGAATTTTAACCCAGAACTGACTCATGGGGAGTCCACTTaGCCCATTCCATGGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SCSVYVTPQKLNFNPELTHGEST*PIPWGG Trigger: ACCACCCCATGGAATGGGCCAAGTGGACTCCCCATG...AGTCAGTTCTGGGTTAAAATTCAACTTCTGGGGAGTCACATAAACTGAGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000624951.1 |
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| CDS-3UTR CCA 90 bp | AAAATGAGGATGAGACTTGCTGGACTGCATTCCAGGAGGGTAGGCATTCTTAGTGAGGATGAGACTTGCTaGACTGCATTCCAGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KMRMRLAGLHSRRVGILSEDETC*TAFQEG Trigger: ACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCTC...ACTAAGAATGCCTACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCTCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCCCTTCTAGATGCTGGGTTTTTGCCTTCAAGTTGGCTTTCTTCATGGGGCTCTGGGTACAGTTaGTACAGGCTCTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FFSLLDAGFLPSSWLSSWGSGYS*YRLWSL Trigger: CAGAGACCAGAGCCTGTACCAACTGTACCCAGAGCC...CCATGAAGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAGAAGGGAGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCGGAGGCCAGCAGGATTaGTATCACAAGACACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSGGQQD*YHKTQV Trigger: GACCTGTGTCTTGTGATATCAATCCTGCTGGCCTCC...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCGAGGATGAGACTTGCTaGACTGCATTCCAGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSEDETC*TAFQEG Trigger: ACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCTC...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCAACTCCAGTGGTAAATaGAGGCTCTGGGTACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSNSSGK*RLWVQL Trigger: CAACTGTACCCAGAGCCTTCATTTACCACTGGAGTT...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR GCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCAATGAGGATGAGACTTaGTGGACTGCATTCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSNEDET*WTAFQE Trigger: CTCCTGGAATGCAGTCCAGCAAGTCTCATCCTCATT...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR GCA 90 bp | GGCTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAAATGAGGATGAGACTTaGTGGACTGCATTCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GFLHGGKMDPAILSEVFENEDET*WTAFQE Trigger: CTCCTGGAATGCAGTCCAGCAAGTCTCATCCTCATT...TTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCCCTTCTAGATGCTGGGTTTTTGCCTTCAAGTTGGCTTTCTTCATGGAGTTGGCTTTCTTCATaGTGGCAAAATGGATCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FFSLLDAGFLPSSWLSSWSWLSS*WQNGSS Trigger: GCTGGATCCATTTTGCCACCATGAAGAAAGCCAACT...CCATGAAGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAGAAGGGAGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | AGGCCAGCAGGATTGATATCACAAGACACAGGTCACAAAGACCCTGTCCAAGTTTTTTTGCCTTCAAGTTaGCTTTCTTCATGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RPAGLISQDTGHKDPVQVFLPSS*LSSWWQ Trigger: TTGCCACCATGAAGAAAGCCAACTTGAAGGCAAAAA...AACTTGGACAGGGTCTTTGTGACCTGTGTCTTGTGATATCAATCCTGCTGGCCT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000643357.1 |
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| CDS-3UTR CCA 90 bp | CTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAAGCTTCATGGTGGCAAAATaGATCCAGCAATTCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LSSWWQNGSSNSVRGFRSFMVAK*IQQFCQ Trigger: CTGACAGAATTGCTGGATCCATTTTGCCACCATGAA...GCTTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | GGTACAGTTGGTACAGGCTCTGGTCTCTGTAATTTCCTAGTTCTTCTCCCTTCTCATTGGTTCACAAACTaGAAAACTCCAGTGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: GTVGTGSGLCNFLVLLPSHWFTN*KTPVVN Trigger: ATTTACCACTGGAGTTTTTCAGTTTGTGAACCAATG...AGAAGGGAGAAGAACTAGGAAATTACAGAGACCAGAGCCTGTACCAACTGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | AAAATGAGGATGAGACTTGCTGGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCATTGGTTCACAAACTaGAAAACTCCAGTGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: KMRMRLAGLHSRRVGILSHWFTN*KTPVVN Trigger: ATTTACCACTGGAGTTTTTCAGTTTGTGAACCAATG...ACTAAGAATGCCTACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCTCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCCCTTCTAGATGCTGGGTTTTTGCCTTCAAGTTGGCTTTCTTCATGGTTTTTGCCTTCAAGTTaGCTTTCTTCATGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: FFSLLDAGFLPSSWLSSWFLPSS*LSSWWQ Trigger: TTGCCACCATGAAGAAAGCCAACTTGAAGGCAAAAA...CCATGAAGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAGAAGGGAGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR TCA 90 bp | AGCTGCTCAGTTTATGTGACTCCCCAGAAGTTGAATTTTAACCCAGAACTGACTATTTTAACCCAGAACTaGCTCCAAGTTCATTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SCSVYVTPQKLNFNPELTILTQN*LQVHSS Trigger: AGAAGAATGAACTTGGAGTCAGTTCTGGGTTAAAAT...AGTCAGTTCTGGGTTAAAATTCAACTTCTGGGGAGTCACATAAACTGAGCAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000624951.1 |
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| CDS-3UTR CAA 90 bp | GGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCACAGGGTGAGACAGGAGGCCGTTTTTGCCTTCAAGTaGGCTTTCTTCATGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GLHSRRVGILSHRVRQEAVFAFK*AFFMVA Trigger: TGCCACCATGAAGAAAGCCAACTTGAAGGCAAAAAC...GGCCTCCTGTCTCACCCTGTGACTAAGAATGCCTACCCTCCTGGAATGCAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CAA 90 bp | AAAATGAGGATGAGACTTGCTGGACTGCATTCCAGGAGGGTAGGCATTCTTAGTCTAGATGCTGGGTTTTaGCCTTCAAGTTGGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: KMRMRLAGLHSRRVGILSLDAGF*PSSWLS Trigger: AGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAG...ACTAAGAATGCCTACCCTCCTGGAATGCAGTCCAGCAAGTCTCATCCTCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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| CDS-3UTR CAA 90 bp | GGCTTTCTTCATGGTGGCAAAATGGATCCAGCAATTCTGTCAGAGGTTTTCGAACTAGATGCTGGGTTTTaGCCTTCAAGTTGGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: GFLHGGKMDPAILSEVFELDAGF*PSSWLS Trigger: AGAAAGCCAACTTGAAGGCAAAAACCCAGCATCTAG...TTCGAAAACCTCTGACAGAATTGCTGGATCCATTTTGCCACCATGAAGAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000643357.1 ENST00000646133.1 |
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