RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMIM33 (Homo sapiens)

Ensembl gene IDs: ENSG00000283288, ENSG00000288274

Ensembl transcript IDs: ENST00000637503.1, ENST00000637503.2, ENST00000671802.1

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTGACTaGCTGCCCCAAGGAGAACAGACGTTCGTCACTTCCCTAAGACCA +
Preference number: 1 (lower is better)
Translates to: CQQGLGPNSRRTAPD*LPQGEQTFVTSLRP
Trigger: TGGTCTTAGGGAAGTGACGAACGTCTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CCA 90 bp ATTGTGCTTGGGCTTACAAGGACTTCGGAGCTTGTCAACAAGGTCTaGGCCCTAACAGCCGAAGGACTGCCCCTGACTGACTGCCCCAAG +
Preference number: 1 (lower is better)
Translates to: IVLGLTRTSELVNKV*ALTAEGLPLTDCPK
Trigger: CTTGGGGCAGTCAGTCAGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTCCTTGTAAGCCCAAGCACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 90 bp CTCTCTATAAATGTTCTGAGAGAGCAGCTCCAGCTGAGTCCAGTGTaGCCTTCCGACGCTCTGATGCCCAGGCTCCAATTTGCTTTTGCC +
Preference number: 1 (lower is better)
Translates to: LSINVLREQLQLSPV*PSDALMPRLQFAFA
Trigger: GGCAAAAGCAAATTGGAGCCTGGGCATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTCTCAGAACATTTATAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR TCA 90 bp GTAGAGCACCAGAGGTCCTGCCATAAATGTCTGTCTGCGTGTTCTTaGCTGCAGATGAGTAAGATTCAGAGGTGCTGGGGAAGGCAGTGC +
Preference number: 1 (lower is better)
Translates to: VEHQRSCHKCLSACS*LQMSKIQRCWGRQC
Trigger: GCACTGCCTTCCCCAGCACCTCTGAATCTTACTCATCTGCAGTCAAGAACACGCAGACAGACATTTATGGCAGGACCTCTGGTGCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 90 bp GACGCTCTGATGCCCAGGCTCCAATTTGCTTTTGCCCTAGTTCTCTaGCCGGTTTCTTGTTCTGAGCTAGGTCAGGCTAACTCTCCAAAG +
Preference number: 1 (lower is better)
Translates to: DALMPRLQFAFALVL*PVSCSELGQANSPK
Trigger: CTTTGGAGAGTTAGCCTGACCTAGCTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAAAGCAAATTGGAGCCTGGGCATCAGAGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 90 bp CCCGCAGCATGTTTCTGGGCAGGGCCCTCAAGTTTTGATTTCTCTTaGCCACCACAGGGCTCTCTCTATAAATGTTCTGAGAGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: PAACFWAGPSSFDFS*PPQGSLYKCSERAA
Trigger: AGCTGCTCTCTCAGAACATTTATAGAGAGAGCCCTGTGGTGGGCAAGAGAAATCAAAACTTGAGGGCCCTGCCCAGAAACATGCTGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CCA 90 bp CTTTCCTGTTTTCTCATCAGCCGGAAAGATCTGGGAAATGTCCTGTaGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCACACAGAAAG +
Preference number: 1 (lower is better)
Translates to: LSCFLISRKDLGNVL*YILGLFQQAQAHRK
Trigger: CTTTCTGTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGATGAGAAAACAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR TCA 90 bp GGAGAGGCAAGACAGAGTCAGTGGGGGCCTTTGAAAGCCAATCTTTaGACTATAAATTGTGCTTGGGCTTACAAGGACTTCGGAGCTTGT +
Preference number: 1 (lower is better)
Translates to: GEARQSQWGPLKANL*TINCAWAYKDFGAC
Trigger: ACAAGCTCCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGACTCTGTCTTGCCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 90 bp GAGTCAGTGGGGGCCTTTGAAAGCCAATCTTTGAACTATAAATTGTaGTTGGGCTTACAAGGACTTCGGAGCTTGTCAACAAGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: ESVGAFESQSLNYKL*LGLQGLRSLSTRSG
Trigger: CCCAGACCTTGTTGACAAGCTCCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCCCGAAGGACTGCCCCTaGCTGACTGCCCCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: TRRPSFVFLASGCIILTPPKDCP*LTAPRR
Trigger: TCTCCTTGGGGCAGTCAGTCAGGGGCAGTCCTTCGG...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCACACCCCAGCTTCTCCGCCTaGGCTCTCCCTGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: LGNVLWYILGLFQQAQAHPSFSA*ALPGWP
Trigger: AGGCCAGCCAGGGAGAGCCCAGGCGGAGAAGCTGGG...GTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCATGCTGGGGAAGGCAGTaGCACCAGCAGGCACTGAGC +
Preference number: 2 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASCWGRQ*HQQALS
Trigger: GCTCAGTGCCTGCTGGTGGCACTGCCTTCCCCAGCA...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp GACTTCGGAGCTTGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTGATTCAGGGGTCTGGTaGTCCCTGAAGAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: DFGACQQGLGPNSRRTAPDSGVW*SLKRRE
Trigger: CTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATC...AGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTGAGAGCAGCTCCAGCTaGGTCCAGTGTGCCCTTCCG +
Preference number: 2 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCESSSS*VQCALP
Trigger: CGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTC...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGAGGGAGGGACTTTGTaGGGTGGCCTTGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTEGGTL*GGLGPW
Trigger: CCAGGGCCCAAGGCCACCTCACAAAGTCCCTCCCTC...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCATCTCCACGGGGCCTCTaGCATTCCTGCTTGTGGGGA +
Preference number: 2 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPSPRGL*HSCLWG
Trigger: TCCCCACAAGCAGGAATGTCAGAGGCCCCGTGGAGA...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGCTGGCCTTTGTAGGATaGGGGCCTCTCCACGGGGCC +
Preference number: 2 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTLAFVG*GPLHGA
Trigger: GGCCCCGTGGAGAGGCCCTCATCCTACAAAGGCCAG...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGATTTCCCAGCCTCCCTaGCTGTGGTGGGGTCTTGCC +
Preference number: 2 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAEISQPP*LWWGLA
Trigger: GGCAAGACCCCACCACAGTCAGGGAGGCTGGGAAAT...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp GGCACTGAGCCACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCACTGCCCCTGACTGACTaGCCCAAGGAGAACAGACGT +
Preference number: 2 (lower is better)
Translates to: GTEPPGGPVLSSWLLDASLPLTD*PKENRR
Trigger: ACGTCTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAG...TGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGTGGCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCACACGCCCTTCCGACGCTCTaGTGCCCAGGCTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: LGNVLWYILGLFQQAQAHALPTL*CPGSNL
Trigger: CAAATTGGAGCCTGGGCATCAGAGCGTCGGAAGGGC...GTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGAGAGCAGCTCCAGCTaGGTCCAGTGTGCCCTTCCG +
Preference number: 2 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTESSSS*VQCALP
Trigger: CGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTC...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCACTGCCCCTGACTGACTaGCCCAAGGAGAACAGACGT +
Preference number: 2 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASLPLTD*PKENRR
Trigger: ACGTCTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAG...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGGATTCAGGGGTCTGGTaGTCCCTGAAGAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAEDSGVW*SLKRRE
Trigger: CTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATC...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CATCAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCACCCAGCTTCTCCGCCTaGGCTCTCCCTGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: HQPERSGKCPVVHSRLVPPSFSA*ALPGWP
Trigger: AGGCCAGCCAGGGAGAGCCCAGGCGGAGAAGCTGGG...TGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACACTGGCCTTTGTAGGATaGGGGCCTCTCCACGGGGCC +
Preference number: 2 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTLAFVG*GPLHGA
Trigger: GGCCCCGTGGAGAGGCCCTCATCCTACAAAGGCCAG...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCTTCCCCCATCCCTTCTaGAGAGGCAAGACAGAGTCA +
Preference number: 2 (lower is better)
Translates to: TRRPSFVFLASGCIILTPFPHPF*RGKTES
Trigger: TGACTCTGTCTTGCCTCTCCAGAAGGGATGGGGGAA...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAGAGGGAGGGACTTTGTaGGGTGGCCTTGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: RSSIITPVACILETSPESEGGTL*GGLGPW
Trigger: CCAGGGCCCAAGGCCACCTCACAAAGTCCCTCCCTC...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CCCACCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTACCCAGCTTCAAATCCTaGCTCCACCACTTAGGACCT +
Preference number: 2 (lower is better)
Translates to: PTLSSRPEDPPSSHQWLVPSFKS*LHHLGP
Trigger: AGGTCCTAAGTGGTGGAGTCAGGATTTGAAGCTGGG...TACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATCAGCTGAGTCCAGTGTaGCCTTCCGACGCTCTGATG +
Preference number: 2 (lower is better)
Translates to: LVETGFRQASLELLTLGDQLSPV*PSDALM
Trigger: CATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTG...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCAGAGCACCAGAGGTCCTaGCATAAATGTCTGTCTGCG +
Preference number: 2 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASEHQRS*HKCLSA
Trigger: CGCAGACAGACATTTATGGCAGGACCTCTGGTGCTC...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp GGCACTGAGCCACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCAGCAAGACAGAGTCAGTaGGGGCCTTTGAAAGCCAAT +
Preference number: 2 (lower is better)
Translates to: GTEPPGGPVLSSWLLDASARQSQ*GPLKAN
Trigger: ATTGGCTTTCAAAGGCCCCCACTGACTCTGTCTTGC...TGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGTGGCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTATGGGGCTTAGGCTGTaGAGTCTGATGGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTMGLRL*SLMAPA
Trigger: AGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCAT...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCAGATTAAGCGTGCAATaGAGGGGCAGAGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: TRRPSFVFLASGCIILTPRLSVQ*RGRDSE
Trigger: TTCTGAGTCTCTGCCCCTTCATTGCACGCTTAATCT...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAAGGACTGCCCCTGACTaGCTGCCCCAAGGAGAACAG +
Preference number: 2 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTRTAPD*LPQGEQ
Trigger: CTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAGTCCT...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp GGCACTGAGCCACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCAAGTTTTGATTTCTCTTaGCCACCACAGGGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: GTEPPGGPVLSSWLLDASSFDFS*PPQGSL
Trigger: GAGAGAGCCCTGTGGTGGGCAAGAGAAATCAAAACT...TGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGTGGCTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTTGCTGGGGAAGGCAGTaGCACCAGCAGGCACTGAGC +
Preference number: 2 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLCWGRQ*HQQALS
Trigger: GCTCAGTGCCTGCTGGTGGCACTGCCTTCCCCAGCA...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp GAATCAAAGGCCTTTCCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGGGAGATTCAGGGGTCTaGTGGTCCCTGAAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: ESKAFPIHPVTVMGLRLWGDSGV*WSLKRR
Trigger: CCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCC...CCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGGAAAGGCCTTTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTATTTCCCAGCCTCCCTaGCTGTGGTGGGGTCTTGCC +
Preference number: 2 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLISQPP*LWWGLA
Trigger: GGCAAGACCCCACCACAGTCAGGGAGGCTGGGAAAT...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATCCCAGCTTCAAATCCTaGCTCCACCACTTAGGACCT +
Preference number: 2 (lower is better)
Translates to: LVETGFRQASLELLTLGDPSFKS*LHHLGP
Trigger: AGGTCCTAAGTGGTGGAGTCAGGATTTGAAGCTGGG...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCATTTGCCCTAGTTCTCTaGCCGGTTTCTTGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPFALVL*PVSCSE
Trigger: CTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAA...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGTTTGCCCTAGTTCTCTaGCCGGTTTCTTGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAEFALVL*PVSCSE
Trigger: CTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAA...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTGAGCACCAGAGGTCCTaGCATAAATGTCTGTCTGCG +
Preference number: 2 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTEHQRS*HKCLSA
Trigger: CGCAGACAGACATTTATGGCAGGACCTCTGGTGCTC...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp GAATCAAAGGCCTTTCCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGCCCGCAGCATGTTTCTaGGCAGGGCCCTCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: ESKAFPIHPVTVMGLRLWPAACF*AGPSSF
Trigger: AAAACTTGAGGGCCCTGCCCAGAAACATGCTGCGGG...CCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGGAAAGGCCTTTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCACCAGTTTTGTCTTCCTaGCTTCTGGATGCATCATCC +
Preference number: 2 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASPVLSS*LLDASS
Trigger: GGATGATGCATCCAGAAGCCAGGAAGACAAAACTGG...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CAA 90 bp ATCAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTaGTTCCAACAGGCCCAGGCACACAGAAAGTGGGAGGCAATGAGA +
Preference number: 2 (lower is better)
Translates to: ISRKDLGNVLWYILG*FQQAQAHRKWEAMR
Trigger: TCTCATTGCCTCCCACTTTCTGTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTAGGGCCCTCAAGTTTTaGTTTCTCTTGCCCACCACA +
Preference number: 2 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTRALKF*FLLPTT
Trigger: TGTGGTGGGCAAGAGAAATCAAAACTTGAGGGCCCT...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGAGGGCCCTCAAGTTTTaGTTTCTCTTGCCCACCACA +
Preference number: 2 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTRALKF*FLLPTT
Trigger: TGTGGTGGGCAAGAGAAATCAAAACTTGAGGGCCCT...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTCAGCTGAGTCCAGTGTaGCCTTCCGACGCTCTGATG +
Preference number: 2 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLQLSPV*PSDALM
Trigger: CATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTG...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACACCCGCAGCATGTTTCTaGGCAGGGCCCTCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTPAACF*AGPSSF
Trigger: AAAACTTGAGGGCCCTGCCCAGAAACATGCTGCGGG...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCCTGCTTGTGGGGAGTTaGATTCACATTACAAAGGAA +
Preference number: 2 (lower is better)
Translates to: TRRPSFVFLASGCIILTPLLVGS*IHITKE
Trigger: TTCCTTTGTAATGTGAATCCAACTCCCCACAAGCAG...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CAA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTaGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTTCCAATCCA +
Preference number: 2 (lower is better)
Translates to: PCPQGLKILHHHTSG*YTRNQPRIKGLSNP
Trigger: TGGATTGGAAAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGAGATTAAGCGTGCAATaGAGGGGCAGAGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTRLSVQ*RGRDSE
Trigger: TTCTGAGTCTCTGCCCCTTCATTGCACGCTTAATCT...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCACTGCTTGTGGGGAGTTaGATTCACATTACAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPLLVGS*IHITKE
Trigger: TTCCTTTGTAATGTGAATCCAACTCCCCACAAGCAG...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CATCAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCACTTGTCAACAAGGTCTaGGCCCTAACAGCCGAAGGA +
Preference number: 2 (lower is better)
Translates to: HQPERSGKCPVVHSRLVPLVNKV*ALTAEG
Trigger: TCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAG...TGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp GAATCAAAGGCCTTTCCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGGCAAGACAGAGTCAGTaGGGGCCTTTGAAAGCCAAT +
Preference number: 2 (lower is better)
Translates to: ESKAFPIHPVTVMGLRLWARQSQ*GPLKAN
Trigger: ATTGGCTTTCAAAGGCCCCCACTGACTCTGTCTTGC...CCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGGAAAGGCCTTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGTCAGCCGGAAAGATCTaGGAAATGTCCTGTGGTACA +
Preference number: 2 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTSAGKI*EMSCGT
Trigger: TGTACCACAGGACATTTCCCAGATCTTTCCGGCTGA...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTCCAGTTTTGTCTTCCTaGCTTCTGGATGCATCATCC +
Preference number: 2 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTPVLSS*LLDASS
Trigger: GGATGATGCATCCAGAAGCCAGGAAGACAAAACTGG...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATGTTCTTGACTGCAGATaGGTAAGATTCAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: LVETGFRQASLELLTLGDVLDCR*VRFRGA
Trigger: AGCACCTCTGAATCTTACTCATCTGCAGTCAAGAAC...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CAA 90 bp TGGAGAGGCAAGACAGAGTCAGTGGGGGCCTTTGAAAGCCAATCTTaGAACTATAAATTGTGCTTGGGCTTACAAGGACTTCGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: WRGKTESVGAFESQS*NYKLCLGLQGLRSL
Trigger: CAAGCTCCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGACTCTGTCTTGCCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR TCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGTCAGTGGGGGCCTTTaGAAGCCAATCTTTGAACTA +
Preference number: 2 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTVSGGL*KPIFEL
Trigger: TAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGAC...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp GAATCAAAGGCCTTTCCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGGTTGTGAGGAGTGAATaGTATCATATCTGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: ESKAFPIHPVTVMGLRLWVVRSE*YHICRS
Trigger: GGACCTACAGATATGATACCATTCACTCCTCACAAC...CCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGGAAAGGCCTTTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CAA 90 bp ACAGAGTCAGTGGGGGCCTTTGAAAGCCAATCTTTGAACTATAAATaGTGCTTGGGCTTACAAGGACTTCGGAGCTTGTCAACAAGGTCT +
Preference number: 2 (lower is better)
Translates to: TESVGAFESQSLNYK*CLGLQGLRSLSTRS
Trigger: AGACCTTGTTGACAAGCTCCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGACTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAGTTGTGAGGAGTGAATaGTATCATATCTGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: RSSIITPVACILETSPESVVRSE*YHICRS
Trigger: GGACCTACAGATATGATACCATTCACTCCTCACAAC...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR GCA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTTTGAACTATAAATTGTaGTTGGGCTTACAAGGACTT +
Preference number: 2 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLLNYKL*LGLQGL
Trigger: AAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAA...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR TCA 72 bp GGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTGACTaGCTGCCCCAAGGAGAACAGACGTTCGTCACTTCC +
Preference number: 3 (lower is better)
Translates to: GLGPNSRRTAPD*LPQGEQTFVTS
Trigger: GGAAGTGACGAACGTCTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CCA 72 bp GGGCTTACAAGGACTTCGGAGCTTGTCAACAAGGTCTaGGCCCTAACAGCCGAAGGACTGCCCCTGACTGAC +
Preference number: 3 (lower is better)
Translates to: GLTRTSELVNKV*ALTAEGLPLTD
Trigger: GTCAGTCAGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTCCTTGTAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp CCCACCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTACCAGGAGGCCCAGTTTaGTCTTCCTGGCTTCTGGAT +
Preference number: 3 (lower is better)
Translates to: PTLSSRPEDPPSSHQWLVPGGPV*SSWLLD
Trigger: ATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGG...TACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR TCA 72 bp GGCCTTTGTAGGATGAGGGCCTCTCCACGGGGCCTCTaGCATTCCTGCTTGTGGGGAGTTGGATTCACATTA +
Preference number: 3 (lower is better)
Translates to: GLCRMRASPRGL*HSCLWGVGFTL
Trigger: TAATGTGAATCCAACTCCCCACAAGCAGGAATGTCAGAGGCCCCGTGGAGAGGCCCTCATCCTACAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 72 bp GTGCCCTTCCGACGCTCTGATGCCCAGGCTCCAATTTaGTTTTGCCCTAGTTCTCTGCCCGGTTTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: VPFRRSDAQAPI*FCPSSLPGFLF
Trigger: GAACAAGAAACCGGGCAGAGAACTAGGGCAAAAGCAAATTGGAGCCTGGGCATCAGAGCGTCGGAAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 72 bp AATGTTCTGAGAGAGCAGCTCCAGCTGAGTCCAGTGTaGCCTTCCGACGCTCTGATGCCCAGGCTCCAATTT +
Preference number: 3 (lower is better)
Translates to: NVLREQLQLSPV*PSDALMPRLQF
Trigger: AAATTGGAGCCTGGGCATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTCTCAGAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTCAAGGACTTCGGAGCTaGTCAACAAGGTCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTQGLRS*STRSGP
Trigger: GGGCCCAGACCTTGTTGACAAGCTCCGAAGTCCTTG...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CCA 72 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTaGAGTCTGATGGCCCCAGCTTCAAATCCTGACTCC +
Preference number: 3 (lower is better)
Translates to: PIHPVTVMGLRL*SLMAPASNPDS
Trigger: GGAGTCAGGATTTGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CCA 72 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTaGCTGCCCCTAAGAACGGCAGAGCCAAGGGAGTCA +
Preference number: 3 (lower is better)
Translates to: NAPHRHTWVRRN*LPLRTAEPRES
Trigger: TGACTCCCTTGGCTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTTGGTACATTCTAGGCTaGTTCCAACAGGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTWYILG*FQQAQA
Trigger: TGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCA...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp GAATCAAAGGCCTTTCCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGCAGGGCCCTCAAGTTTaGATTTCTCTTGCCCACCAC +
Preference number: 3 (lower is better)
Translates to: ESKAFPIHPVTVMGLRLWQGPQV*ISLAHH
Trigger: GTGGTGGGCAAGAGAAATCAAAACTTGAGGGCCCTG...CCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGGAAAGGCCTTTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR GCA 72 bp ATGCCCAGGCTCCAATTTGCTTTTGCCCTAGTTCTCTaGCCGGTTTCTTGTTCTGAGCTAGGTCAGGCTAAC +
Preference number: 3 (lower is better)
Translates to: MPRLQFAFALVL*PVSCSELGQAN
Trigger: GTTAGCCTGACCTAGCTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAAAGCAAATTGGAGCCTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGAACTATAAATTGTGCTaGGGCTTACAAGGACTTCGG +
Preference number: 3 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAENYKLC*GLQGLR
Trigger: CCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTT...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR TCA 72 bp CAGAGGTCCTGCCATAAATGTCTGTCTGCGTGTTCTTaGCTGCAGATGAGTAAGATTCAGAGGTGCTGGGGA +
Preference number: 3 (lower is better)
Translates to: QRSCHKCLSACS*LQMSKIQRCWG
Trigger: TCCCCAGCACCTCTGAATCTTACTCATCTGCAGTCAAGAACACGCAGACAGACATTTATGGCAGGACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CCA 72 bp TTTCTCATCAGCCGGAAAGATCTGGGAAATGTCCTGTaGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: FLISRKDLGNVL*YILGLFQQAQA
Trigger: TGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGATGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCACAGGGCCCTCAAGTTTaGATTTCTCTTGCCCACCAC +
Preference number: 3 (lower is better)
Translates to: RSSIITPVACILETSPESQGPQV*ISLAHH
Trigger: GTGGTGGGCAAGAGAAATCAAAACTTGAGGGCCCTG...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTTGGTACATTCTAGGCTaGTTCCAACAGGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLWYILG*FQQAQA
Trigger: TGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCA...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR-3UTR CAA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAACTATAAATTGTGCTaGGGCTTACAAGGACTTCGG +
Preference number: 3 (lower is better)
Translates to: RSSIITPVACILETSPESNYKLC*GLQGLR
Trigger: CCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTT...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
CDS-3UTR GCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCCGGAGCTGCCACGTCTaGGGGGCCCATGGGCACACA +
Preference number: 4 (lower is better)
Translates to: TRRPSFVFLASGCIILTPRSCHV*GAHGHT
Trigger: TGTGTGCCCATGGGCCCCGCAGACGTGGCAGCTCCG...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCGAGGGAGGGACTTTGTaGGGTGGCCTTGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TRRPSFVFLASGCIILTPEGGTL*GGLGPW
Trigger: CCAGGGCCCAAGGCCACCTCACAAAGTCCCTCCCTC...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCCTGGCCTTTGTAGGATaGGGGCCTCTCCACGGGGCC +
Preference number: 4 (lower is better)
Translates to: TRRPSFVFLASGCIILTPLAFVG*GPLHGA
Trigger: GGCCCCGTGGAGAGGCCCTCATCCTACAAAGGCCAG...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp TGTTCTGAGAGAGCAGCTCCAGCTGAGTCCAGTGTGCCCTTCCGACGCTCTGATGAGAGCAGCTCCAGCTaGGTCCAGTGTGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: CSERAAPAESSVPFRRSDESSSS*VQCALP
Trigger: CGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTC...ATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTCTCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTGCCCCTACCCGGAGCTaGCACGTCTGCGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTAPTRS*HVCGAH
Trigger: ATGGGCCCCGCAGACGTGGCAGCTCCGGGTAGGGGC...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCACCGAAGGACTGCCCCTaGCTGACTGCCCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASPKDCP*LTAPRR
Trigger: TCTCCTTGGGGCAGTCAGTCAGGGGCAGTCCTTCGG...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGTCAGGAGCCTGGGTGTaGCTGACCACCCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAESGAWV*LTTPPP
Trigger: TGGAGGAGGGGTGGTCAGGCACACCCAGGCTCCTGA...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCACACGACACAGGGCTCCCTTaGGACTGGCAGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGNVLWYILGLFQQAQAHDTGLP*DWQPAG
Trigger: CCCAGCTGGCTGCCAGTCCCAAGGGAGCCCTGTGTC...GTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp GACTTCGGAGCTTGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTGTAGATGCCACCATCTaGCTTTGGGGTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: DFGACQQGLGPNSRRTAPVDATI*LWGRWL
Trigger: GAGCCACCGACCCCAAAGCCAGATGGTGGCATCTAC...AGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCATCTTCAGGACTGTCTTaGGGGCCCAGCACCCGCCAG +
Preference number: 4 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASSSGLS*GPSTRQ
Trigger: CTGGCGGGTGCTGGGCCCCCAAGACAGTCCTGAAGA...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTCATCGATGCTGGGCCTaGGTCCATCTGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCHRCWA*VHLAQG
Trigger: GCCCTGCGCCAGATGGACCCAGGCCCAGCATCGATG...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCACCTTCCGGGAACATCTaGGCTACCCTGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASPSGNI*ATLGSA
Trigger: GGCAGAGCCCAGGGTAGCCCAGATGTTCCCGGAAGG...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTCGTCTGCGGGGCCCATaGGCACACACCCTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCRLRGP*AHTLCT
Trigger: TGTGCACAGGGTGTGTGCCCATGGGCCCCGCAGACG...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTAGCACCTCCGGAAGCTaGCTCTGGGGCTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCSTSGS*LWGSCS
Trigger: AGAGCAGGAGCCCCAGAGGCAGCTTCCGGAGGTGCT...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCAGTGGCATGGCCCTGGTaGAGCCTTGGCCCAAAATGG +
Preference number: 4 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASVAWPW*SLGPKW
Trigger: CCATTTTGGGCCAAGGCTGCACCAGGGCCATGCCAC...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTTGCTGGGGAAGGCAGTaGCACCAGCAGGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCCWGRQ*HQQALS
Trigger: GCTCAGTGCCTGCTGGTGGCACTGCCTTCCCCAGCA...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCGGAGATTCAGGGGTCTaGTGGTCCCTGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TRRPSFVFLASGCIILTPGDSGV*WSLKRR
Trigger: CCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCC...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TGTTCTGAGAGAGCAGCTCCAGCTGAGTCCAGTGTGCCCTTCCGACGCTCTGATATGGGGCTTAGGCTGTaGAGTCTGATGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CSERAAPAESSVPFRRSDMGLRL*SLMAPA
Trigger: AGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCAT...ATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTGGAGCTGCTCTCTCAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCACACGCACCCGCCAGTGGATaGGGTAGATGCCACCATCTG +
Preference number: 4 (lower is better)
Translates to: LGNVLWYILGLFQQAQAHAPASG*GRCHHL
Trigger: CAGATGGTGGCATCTACCTCATCCACTGGCGGGTGC...GTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCACAGCTGAGTCCAGTGTaGCCTTCCGACGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPQLSPV*PSDALM
Trigger: CATCAGAGCGTCGGAAGGGCACACTGGACTCAGCTG...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp GACTTCGGAGCTTGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTAGTAAGATTCAGAGGTaGTGGGGAAGGCAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DFGACQQGLGPNSRRTAPSKIQR*WGRQCH
Trigger: GTGGCACTGCCTTCCCCAGCACCTCTGAATCTTACT...AGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp GGCACTGAGCCACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCAAGGCATGAGACACCGTaGACTGTGCCTGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: GTEPPGGPVLSSWLLDASRHETP*TVPGLF
Trigger: AAACAGGCCAGGCACAGTGCACGGTGTCTCATGCCT...TGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGTGGCTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp ACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATCCTGACCCCCCCCGCAGCATGTTTCTaGGCAGGGCCCTCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TRRPSFVFLASGCIILTPPAACF*AGPSSF
Trigger: AAAACTTGAGGGCCCTGCCCAGAAACATGCTGCGGG...GGGGGTCAGGATGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp GACTTCGGAGCTTGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTCAGATCTCAGAAGCCTaGCCAGAGCCCCAACCTAAT +
Preference number: 4 (lower is better)
Translates to: DFGACQQGLGPNSRRTAPQISEA*PEPQPN
Trigger: ATTAGGTTGGGGCTCTGGCCAGGCTTCTGAGATCTG...AGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCACCTCCTACAGACAAGTaGCTTCATCGATGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPPPTDK*LHRCWA
Trigger: GGCCCAGCATCGATGAAGTCACTTGTCTGTAGGAGG...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTGCCCTTCCGACGCTCTaGTGCCCAGGCTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTALPTL*CPGSNL
Trigger: CAAATTGGAGCCTGGGCATCAGAGCGTCGGAAGGGC...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATAGGACTGCCCCTGACTaGCTGCCCCAAGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LVETGFRQASLELLTLGDRTAPD*LPQGEQ
Trigger: CTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAGTCCT...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTATTTCCCAGCCTCCCTaGCTGTGGTGGGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTISQPP*LWWGLA
Trigger: GGCAAGACCCCACCACAGTCAGGGAGGCTGGGAAAT...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTGCCCTGGTGCAGCCTTaGCCCAAAATGGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTALVQP*PKMDCH
Trigger: GTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGC...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TTTGCTTTTGCCCTAGTTCTCTGCCCGGTTTCTTGTTCTGAGCTAGGTCAGGCTGTAGGGAGAGTGGCATaGCCCTGGTGCAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FAFALVLCPVSCSELGQAVGRVA*PWCSLG
Trigger: GCCAAGGCTGCACCAGGGCCATGCCACTCTCCCTAC...AGCCTGACCTAGCTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAAAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CACGGGGCCTCTGACATTCCTGCTTGTGGGGAGTTGGATTCACATTACAAAGGATGGCTTTGGGGTCGGTaGCTCTGTAGGGAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HGASDIPACGELDSHYKGWLWGR*LCRESG
Trigger: GCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCA...TCCTTTGTAATGTGAATCCAACTCCCCACAAGCAGGAATGTCAGAGGCCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCACCCAGCTTCTCCGCCTaGGCTCTCCCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESPSFSA*ALPGWP
Trigger: AGGCCAGCCAGGGAGAGCCCAGGCGGAGAAGCTGGG...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp GGCACTGAGCCACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCATTCCCCCATCCCTTCTaGAGAGGCAAGACAGAGTCA +
Preference number: 4 (lower is better)
Translates to: GTEPPGGPVLSSWLLDASFPHPF*RGKTES
Trigger: TGACTCTGTCTTGCCTCTCCAGAAGGGATGGGGGAA...TGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGTGGCTCAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp GAATCAAAGGCCTTTCCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGCCAGCTTCAGGAGCCTaGGTGTGCCTGACCACCCCT +
Preference number: 4 (lower is better)
Translates to: ESKAFPIHPVTVMGLRLWPASGA*VCLTTP
Trigger: AGGGGTGGTCAGGCACACCCAGGCTCCTGAAGCTGG...CCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGGAAAGGCCTTTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp GACTTCGGAGCTTGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTGTCAGTGGGGGCCTTTaGAAGCCAATCTTTGAACTA +
Preference number: 4 (lower is better)
Translates to: DFGACQQGLGPNSRRTAPVSGGL*KPIFEL
Trigger: TAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGAC...AGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTAAGAGGGCCCGGTGGTaGTTCTTCAGGACTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCKRARW*FFRTVL
Trigger: CAAGACAGTCCTGAAGAAGCACCACCGGGCCCTCTT...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGCTGCCCCTGACTGACTaGCCCAAGGAGAACAGACGT +
Preference number: 4 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTLPLTD*PKENRR
Trigger: ACGTCTGTTCTCCTTGGGGCAGTCAGTCAGGGGCAG...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATTCCGGAAGCTGCCTCTaGGGCTCCTGCTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LVETGFRQASLELLTLGDSGSCL*GSCSDE
Trigger: TTCATCAGAGCAGGAGCCCCAGAGGCAGCTTCCGGA...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCACTTGTCAACAAGGTCTaGGCCCTAACAGCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASLVNKV*ALTAEG
Trigger: TCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAG...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCATGGGTTAGAAGGAACTaGCTGCCCCTAAGAACGGCA +
Preference number: 4 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASWVRRN*LPLRTA
Trigger: TGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCA...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp GGCACTGAGCCACCAGGAGGCCCAGTTTTGTCTTCCTGGCTTCTGGATGCATCACCACACAGACACACATaGGTTAGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTEPPGGPVLSSWLLDASPHRHT*VRRNWL
Trigger: CAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG...TGATGCATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGGTGGCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAAATGGACTGCCACTATaGTGCAGACTGCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPNGLPL*CRLPAE
Trigger: TTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATT...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTGAGCACCAGAGGTCCTaGCATAAATGTCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCEHQRS*HKCLSA
Trigger: CGCAGACAGACATTTATGGCAGGACCTCTGGTGCTC...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAGGACTGGCAGCCAGCTaGGTAAAGGAGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESGLAAS*VKEGWP
Trigger: TGGCCAGCCCTCCTTTACCCAGCTGGCTGCCAGTCC...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TTTGCTTTTGCCCTAGTTCTCTGCCCGGTTTCTTGTTCTGAGCTAGGTCAGGCTAGAGTGGCATGGCCCTaGTGCAGCCTTGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: FAFALVLCPVSCSELGQARVAWP*CSLGPK
Trigger: TTTTGGGCCAAGGCTGCACCAGGGCCATGCCACTCT...AGCCTGACCTAGCTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAAAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTACATCTGGGCTACCCTaGGCTCTGCCCTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTTSGLP*ALPLTL
Trigger: CAGAGTTAAGGGCAGAGCCCAGGGTAGCCCAGATGT...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGAGATTAAGCGTGCAATaGAGGGGCAGAGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAERLSVQ*RGRDSE
Trigger: TTCTGAGTCTCTGCCCCTTCATTGCACGCTTAATCT...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCATCTCCACGGGGCCTCTaGCATTCCTGCTTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESSPRGL*HSCLWG
Trigger: TCCCCACAAGCAGGAATGTCAGAGGCCCCGTGGAGA...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCCACCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTACCCTGGAGGTTGTTGTaGGGAGTGAATGGTATCATA +
Preference number: 4 (lower is better)
Translates to: PTLSSRPEDPPSSHQWLVPWRLL*GVNGII
Trigger: TATGATACCATTCACTCCTCACAACAACCTCCAGGG...TACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTCCCAGCTTCAAATCCTaGCTCCACCACTTAGGACCT +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTPSFKS*LHHLGP
Trigger: AGGTCCTAAGTGGTGGAGTCAGGATTTGAAGCTGGG...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAACTCCTGACCTTGGGTaGTCCTCCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESTPDLG*SSHLGL
Trigger: GAGGCCAAGGTGGGAGGATCACCCAAGGTCAGGAGT...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CCCACCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATTTGCCCTAGTTCTCTaGCCGGTTTCTTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PTLSSRPEDPPSSHQWLVFALVL*PVSCSE
Trigger: CTCAGAACAAGAAACCGGGCAGAGAACTAGGGCAAA...TACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTCTCTCACCGCTCTCCTaGGCTTGCACTTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLLSPLS*ACTSFR
Trigger: CCGGAAGGAAGTGCAAGCGCAGGAGAGCGGTGAGAG...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAGCCACCATCTGGCTTTaGGGTCGGTGGCTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESATIWL*GRWLCR
Trigger: CCTACAGAGCCACCGACCCCAAAGCCAGATGGTGGC...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGATTCAGGGGTCTGGTaGTCCCTGAAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTDSGVW*SLKRRE
Trigger: CTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATC...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGCTTAATCTTCCTCCTTaGCGCCTCCTTTCATGCCCC +
Preference number: 4 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTLNLPP*RLLSCP
Trigger: GGGGCATGAAAGGAGGCGCCAAGGAGGAAGATTAAG...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGAGGTTGTTCCCAGGTaGCACTTAGCACCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTEVVPR*HLAPPE
Trigger: TTCCGGAGGTGCTAAGTGGCACCTGGGAACAACCTC...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AATGCTCCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGTGGCCCAAAATGGACTaGCACTATGATGCAGACTGC +
Preference number: 4 (lower is better)
Translates to: NAPHRHTWVRRNWLPLRTWPKMD*HYDADC
Trigger: GCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCA...CGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCACCGCTCTCCTGCGCTTaGACTTCCTTCCGGGAACAT +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESPLSCA*TSFREH
Trigger: ATGTTCCCGGAAGGAAGTGCAAGCGCAGGAGAGCGG...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CCCACCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTAATCACTGTGGAGAAATaGTCCACACAGACACACATG +
Preference number: 4 (lower is better)
Translates to: PTLSSRPEDPPSSHQWLVITVEK*STQTHM
Trigger: CATGTGTGTCTGTGTGGAGCATTTCTCCACAGTGAT...TACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATAGCCTTGGCCCAAAATaGACTGCCACTATGATGCAG +
Preference number: 4 (lower is better)
Translates to: LVETGFRQASLELLTLGDSLGPK*TATMMQ
Trigger: CTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCT...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGATCCTCCATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAGACAAGAGGGCCCGGTaGTGCTTCTTCAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: RSSIITPVACILETSPESDKRAR*CFFRTV
Trigger: GACAGTCCTGAAGAAGCACCACCGGGCCCTCTTGTC...TGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTCTGTCTGCGTGTTCTTaGCTGCAGATGAGTAAGATT +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCLSACS*LQMSKI
Trigger: AATCTTACTCATCTGCAGTCAAGAACACGCAGACAG...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR GCA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTAGTTTTGATTTCTCTTaGCCACCACAGGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTSFDFS*PPQGSL
Trigger: GAGAGAGCCCTGTGGTGGGCAAGAGAAATCAAAACT...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATCCAGTTTTGTCTTCCTaGCTTCTGGATGCATCATCC +
Preference number: 4 (lower is better)
Translates to: LVETGFRQASLELLTLGDPVLSS*LLDASS
Trigger: GGATGATGCATCCAGAAGCCAGGAAGACAAAACTGG...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR TCA 90 bp CACGGGGCCTCTGACATTCCTGCTTGTGGGGAGTTGGATTCACATTACAAAGGAGTTCTTGACTGCAGATaGGTAAGATTCAGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGASDIPACGELDSHYKGVLDCR*VRFRGA
Trigger: AGCACCTCTGAATCTTACTCATCTGCAGTCAAGAAC...TCCTTTGTAATGTGAATCCAACTCCCCACAAGCAGGAATGTCAGAGGCCCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp AGAAAAGGAGATTCAGGGGTCTGGTGGTCCCTGAAGAGGAGGGAGGGACTTTGTCCAAAACAAGTTCCATaGAGCTCCTTTTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RKGDSGVWWSLKRREGLCPKQVP*SSFSFP
Trigger: AGGAAAGGAAAAGGAGCTCCATGGAACTTGTTTTGG...ACAAAGTCCCTCCCTCCTCTTCAGGGACCACCAGACCCCTGAATCTCCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000671802.1
3UTR CAA 72 bp CAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTaGTATACTAGAAACCAGCCCAGAATCAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGLKILHHHTSG*YTRNQPRIKGL
Trigger: AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
CDS-3UTR CCA 90 bp CATCAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCATCAGCCGGAAAGATCTaGGAAATGTCCTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: HQPERSGKCPVVHSRLVPSAGKI*EMSCGT
Trigger: TGTACCACAGGACATTTCCCAGATCTTTCCGGCTGA...TGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATGTTGTGAGGAGTGAATaGTATCATATCTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LVETGFRQASLELLTLGDVVRSE*YHICRS
Trigger: GGACCTACAGATATGATACCATTCACTCCTCACAAC...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
3UTR CAA 72 bp ACTCCACCACTTAGGACCTGTGTCTACTTAGGTATCTaGATAACCCTCAGTTTCCCCAAGTGTAAAACGGGG +
Preference number: 4 (lower is better)
Translates to: TPPLRTCVYLGI*ITLSFPKCKTG
Trigger: CCCCGTTTTACACTTGGGGAAACTGAGGGTTATCAAGATACCTAAGTAGACACAGGTCCTAAGTGGTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
3UTR CAA 72 bp GTGGGGGCCTTTGAAAGCCAATCTTTGAACTATAAATaGTGCTTGGGCTTACAAGGACTTCGGAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VGAFESQSLNYK*CLGLQGLRSLS
Trigger: TGACAAGCTCCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGATTGGCTTTCAAAGGCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
CDS-3UTR TCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACACTCAATATACATTTCTaGGTACAGCATCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTLNIHF*VQHHCG
Trigger: TCCACAGTGATGCTGTACTCAGAAATGTATATTGAG...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CCA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTCTGCTTGTGGGGAGTTaGATTCACATTACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLLLVGS*IHITKE
Trigger: TTCCTTTGTAATGTGAATCCAACTCCCCACAAGCAG...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
3UTR CAA 72 bp AAGACAGAGTCAGTGGGGGCCTTTGAAAGCCAATCTTaGAACTATAAATTGTGCTTGGGCTTACAAGGACTT +
Preference number: 4 (lower is better)
Translates to: KTESVGAFESQS*NYKLCLGLQGL
Trigger: AAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGATTGGCTTTCAAAGGCCCCCACTGACTCTGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.1
ENST00000671802.1
CDS-3UTR GCA 90 bp CAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACATTGAACTATAAATTGTaGTTGGGCTTACAAGGACTT +
Preference number: 4 (lower is better)
Translates to: QPERSGKCPVVHSRLVPTLNYKL*LGLQGL
Trigger: AAGTCCTTGTAAGCCCAAGCACAATTTATAGTTCAA...TGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS CCA 90 bp GGGTCCATCTGGCGCAGGGCAGGAGCCAGGGACAAGAGGGCCCGGTaGTGCTTCTTCAGGACTGTCTTGGGGGCCCAGCACCCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GSIWRRAGARDKRAR*CFFRTVLGAQHPPV
Trigger: CACTGGCGGGTGCTGGGCCCCCAAGACAGTCCTGAAGAAGCACCACCGGGCCCTCTTGTCCCTGGCTCCTGCCCTGCGCCAGATGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS GCA 90 bp TCCATCTGGCGCAGGGCAGGAGCCAGGGACAAGAGGGCCCGGTGGTaGTTCTTCAGGACTGTCTTGGGGGCCCAGCACCCGCCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: SIWRRAGARDKRARW*FFRTVLGAQHPPVD
Trigger: ATCCACTGGCGGGTGCTGGGCCCCCAAGACAGTCCTGAAGAAGCACCACCGGGCCCTCTTGTCCCTGGCTCCTGCCCTGCGCCAGATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS TCA 90 bp GCCTCCTTTCATGCCCCCTGCCAGCTTCAGGAGCCTGGGTGTGCCTaGCCACCCCTCCTCCACCAGATCTCAGAAGCCTGGCCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: ASFHAPCQLQEPGCA*PPLLHQISEAWPEP
Trigger: GGGCTCTGGCCAGGCTTCTGAGATCTGGTGGAGGAGGGGTGGTCAGGCACACCCAGGCTCCTGAAGCTGGCAGGGGGCATGAAAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS CCA 90 bp CCGCCAGTGGATGAGGTAGATGCCACCATCTGGCTTTGGGGTCGGTaGCTCTGTAGGGAGAGTGGCATGGCCCTGGTGCAGCCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: PPVDEVDATIWLWGR*LCRESGMALVQPWP
Trigger: GGGCCAAGGCTGCACCAGGGCCATGCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCAGATGGTGGCATCTACCTCATCCACTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 90 bp TTGGGGGCCCAGCACCCGCCAGTGGATGAGGTAGATGCCACCATCTaGCTTTGGGGTCGGTGGCTCTGTAGGGAGAGTGGCATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LGAQHPPVDEVDATI*LWGRWLCRESGMAL
Trigger: CAGGGCCATGCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCAGATGGTGGCATCTACCTCATCCACTGGCGGGTGCTGGGCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 90 bp GGTCGGTGGCTCTGTAGGGAGAGTGGCATGGCCCTGGTGCAGCCTTaGCCCAAAATGGACTGCCACTATGATGCAGACTGCCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: GRWLCRESGMALVQP*PKMDCHYDADCQQN
Trigger: GTTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCCATGCCACTCTCCCTACAGAGCCACCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS-3UTR CAA 90 bp CACGGGGCCTCTGACATTCCTGCTTGTGGGGAGTTGGATTCACATTACAAAGGAGGCCAGCCTGGTGCATaGTCCGGGCCGACACAGGGC +
Preference number: 5 (lower is better)
Translates to: HGASDIPACGELDSHYKGGQPGA*SGPTQG
Trigger: GCCCTGTGTCGGCCCGGACAATGCACCAGGCTGGCC...TCCTTTGTAATGTGAATCCAACTCCCCACAAGCAGGAATGTCAGAGGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS CCA 90 bp TCTGGCTTTGGGGTCGGTGGCTCTGTAGGGAGAGTGGCATGGCCCTaGTGCAGCCTTGGCCCAAAATGGACTGCCACTATGATGCAGACT +
Preference number: 5 (lower is better)
Translates to: SGFGVGGSVGRVAWP*CSLGPKWTATMMQT
Trigger: AGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCCATGCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS-3UTR CAA 90 bp CCACACAGACACACATGGGTTAGAAGGAACTGGCTGCCCCTAAGAACGGCAGAGTTCTTCAGGACTGTCTaGGGGGCCCAGCACCCGCCA +
Preference number: 5 (lower is better)
Translates to: PHRHTWVRRNWLPLRTAEFFRTV*GAQHPP
Trigger: TGGCGGGTGCTGGGCCCCCAAGACAGTCCTGAAGAA...CTCTGCCGTTCTTAGGGGCAGCCAGTTCCTTCTAACCCATGTGTGTCTGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CCAATCCATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAACCGCTCTCCTGCGCTaGCACTTCCTTCCGGGAACA +
Preference number: 5 (lower is better)
Translates to: PIHPVTVMGLRLWSLMAPTALLR*HFLPGT
Trigger: TGTTCCCGGAAGGAAGTGCAAGCGCAGGAGAGCGGT...TGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTATACTGGCCCTGGTGCAGCCTaGGCCCAAAATGGACTGCCA +
Preference number: 5 (lower is better)
Translates to: PCPQGLKILHHHTSGLYTGPGAA*AQNGLP
Trigger: TGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCC...AGTATACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp GACTTCGGAGCTTGTCAACAAGGTCTGGGCCCTAACAGCCGAAGGACTGCCCCTCAGGGCCCTCAAGTTTaGATTTCTCTTGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: DFGACQQGLGPNSRRTAPQGPQV*ISLAHH
Trigger: GTGGTGGGCAAGAGAAATCAAAACTTGAGGGCCCTG...AGGGGCAGTCCTTCGGCTGTTAGGGCCCAGACCTTGTTGACAAGCTCCGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS GCA 90 bp CTGGTGCAGCCTTGGCCCAAAATGGACTGCCACTATGATGCAGACTaGCAGCAGAACAAAGACAGCGACAATGACGGTGACCACAGGCAG +
Preference number: 5 (lower is better)
Translates to: LVQPWPKMDCHYDAD*QQNKDSDNDGDHRQ
Trigger: CTGCCTGTGGTCACCGTCATTGTCGCTGTCTTTGTTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 90 bp CACTCTCACCGCTCTCCTGCGCTTGCACTTCCTTCCGGGAACATCTaGGCTACCCTGGGCTCTGCCCTTAACTCTGATAGTACCTTAATC +
Preference number: 5 (lower is better)
Translates to: HSHRSPALALPSGNI*ATLGSALNSDSTLI
Trigger: GATTAAGGTACTATCAGAGTTAAGGGCAGAGCCCAGGGTAGCCCAGATGTTCCCGGAAGGAAGTGCAAGCGCAGGAGAGCGGTGAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CATCCAGTAACTGTCATGGGGCTTAGGCTGTGGAGTCTGATGGCCCCAGCTTCACCAGGAGGCCCAGTTTaGTCTTCCTGGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: HPVTVMGLRLWSLMAPASPGGPV*SSWLLD
Trigger: ATCCAGAAGCCAGGAAGACAAAACTGGGCCTCCTGG...TGAAGCTGGGGCCATCAGACTCCACAGCCTAAGCCCCATGACAGTTACTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CATCATCACACCAGTGGCTTGTATACTAGAAACCAGCCCAGAATCAAAGGCCTTCAAGGACTTCGGAGCTaGTCAACAAGGTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: HHHTSGLYTRNQPRIKGLQGLRS*STRSGP
Trigger: GGGCCCAGACCTTGTTGACAAGCTCCGAAGTCCTTG...AAGGCCTTTGATTCTGGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp TTAGTAGAGACGGGGTTTCGCCAGGCTAGTCTTGAACTCCTGACCTTGGGTGATCATCACACCAGTGGCTaGTATACTAGAAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: LVETGFRQASLELLTLGDHHTSG*YTRNQP
Trigger: GGGCTGGTTTCTAGTATACAAGCCACTGGTGTGATG...ATCACCCAAGGTCAGGAGTTCAAGACTAGCCTGGCGAAACCCCGTCTCTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CCCACCCTGTCCTCAAGGCCTGAAGATCCTCCATCATCACACCAGTGGCTTGTAAACTATAAATTGTGCTaGGGCTTACAAGGACTTCGG +
Preference number: 5 (lower is better)
Translates to: PTLSSRPEDPPSSHQWLVNYKLC*GLQGLR
Trigger: CCGAAGTCCTTGTAAGCCCAAGCACAATTTATAGTT...TACAAGCCACTGGTGTGATGATGGAGGATCTTCAGGCCTTGAGGACAGGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CATCAGCCGGAAAGATCTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCATGGTACATTCTAGGCTaGTTCCAACAGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: HQPERSGKCPVVHSRLVPWYILG*FQQAQA
Trigger: TGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCA...TGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAGATCTTTCCGGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS-3UTR CAA 90 bp CTGGGAAATGTCCTGTGGTACATTCTAGGCTTGTTCCAACAGGCCCAGGCACACTCTTTGAACTATAAATaGTGCTTGGGCTTACAAGGA +
Preference number: 5 (lower is better)
Translates to: LGNVLWYILGLFQQAQAHSLNYK*CLGLQG
Trigger: TCCTTGTAAGCCCAAGCACAATTTATAGTTCAAAGA...GTGTGCCTGGGCCTGTTGGAACAAGCCTAGAATGTACCACAGGACATTTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS GCA 72 bp AGGGCTGGCCACCCTAATTCAGCCCCTACCCGGAGCTaGCACGTCTGCGGGGCCCATGGGCACACACCCTGT +
Preference number: 6 (lower is better)
Translates to: RAGHPNSAPTRS*HVCGAHGHTPC
Trigger: ACAGGGTGTGTGCCCATGGGCCCCGCAGACGTGGCAGCTCCGGGTAGGGGCTGAATTAGGGTGGCCAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS CAA 90 bp GGAGCCAGGGACAAGAGGGCCCGGTGGTGCTTCTTCAGGACTGTCTaGGGGGCCCAGCACCCGCCAGTGGATGAGGTAGATGCCACCATC +
Preference number: 6 (lower is better)
Translates to: GARDKRARWCFFRTV*GAQHPPVDEVDATI
Trigger: GATGGTGGCATCTACCTCATCCACTGGCGGGTGCTGGGCCCCCAAGACAGTCCTGAAGAAGCACCACCGGGCCCTCTTGTCCCTGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS TCA 72 bp CAGGACTGTCTTGGGGGCCCAGCACCCGCCAGTGGATaGGGTAGATGCCACCATCTGGCTTTGGGGTCGGTG +
Preference number: 6 (lower is better)
Translates to: QDCLGGPAPASG*GRCHHLALGSV
Trigger: CACCGACCCCAAAGCCAGATGGTGGCATCTACCTCATCCACTGGCGGGTGCTGGGCCCCCAAGACAGTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS GCA 72 bp CCACAGGCAGCCCGTCAACTCGAGGTTGTTCCCAGGTaGCACTTAGCACCTCCGGAAGCTGCCTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: PQAARQLEVVPR*HLAPPEAASGA
Trigger: AGCCCCAGAGGCAGCTTCCGGAGGTGCTAAGTGGCACCTGGGAACAACCTCGAGTTGACGGGCTGCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS GCA 72 bp CTTTCATGCCCCCTGCCAGCTTCAGGAGCCTGGGTGTaGCTGACCACCCCTCCTCCACCAGATCTCAGAAGC +
Preference number: 6 (lower is better)
Translates to: LSCPLPASGAWV*LTTPPPPDLRS
Trigger: GCTTCTGAGATCTGGTGGAGGAGGGGTGGTCAGGCACACCCAGGCTCCTGAAGCTGGCAGGGGGCATGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS CCA 72 bp GGGGTCGGTGGCTCTGTAGGGAGAGTGGCATGGCCCTaGTGCAGCCTTGGCCCAAAATGGACTGCCACTATG +
Preference number: 6 (lower is better)
Translates to: GVGGSVGRVAWP*CSLGPKWTATM
Trigger: CATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCCATGCCACTCTCCCTACAGAGCCACCGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 72 bp CCGCCAGTGGATGAGGTAGATGCCACCATCTGGCTTTaGGGTCGGTGGCTCTGTAGGGAGAGTGGCATGGCC +
Preference number: 6 (lower is better)
Translates to: PPVDEVDATIWL*GRWLCRESGMA
Trigger: GGCCATGCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCAGATGGTGGCATCTACCTCATCCACTGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 72 bp CAGCACCCGCCAGTGGATGAGGTAGATGCCACCATCTaGCTTTGGGGTCGGTGGCTCTGTAGGGAGAGTGGC +
Preference number: 6 (lower is better)
Translates to: QHPPVDEVDATI*LWGRWLCRESG
Trigger: GCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCAGATGGTGGCATCTACCTCATCCACTGGCGGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CAA 72 bp GACAAGAGGGCCCGGTGGTGCTTCTTCAGGACTGTCTaGGGGGCCCAGCACCCGCCAGTGGATGAGGTAGAT +
Preference number: 6 (lower is better)
Translates to: DKRARWCFFRTV*GAQHPPVDEVD
Trigger: ATCTACCTCATCCACTGGCGGGTGCTGGGCCCCCAAGACAGTCCTGAAGAAGCACCACCGGGCCCTCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS GCA 72 bp GGCACACACCCTGTGCACACACTCTCACCGCTCTCCTaGGCTTGCACTTCCTTCCGGGAACATCTGGGCTAC +
Preference number: 6 (lower is better)
Translates to: GTHPVHTLSPLS*ACTSFREHLGY
Trigger: GTAGCCCAGATGTTCCCGGAAGGAAGTGCAAGCGCAGGAGAGCGGTGAGAGTGTGTGCACAGGGTGTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS CCA 72 bp GATGAGGTAGATGCCACCATCTGGCTTTGGGGTCGGTaGCTCTGTAGGGAGAGTGGCATGGCCCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: DEVDATIWLWGR*LCRESGMALVQ
Trigger: CTGCACCAGGGCCATGCCACTCTCCCTACAGAGCCACCGACCCCAAAGCCAGATGGTGGCATCTACCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS GCA 72 bp GGTTGTTCCCAGGTGCCACTTAGCACCTCCGGAAGCTaGCTCTGGGGCTCCTGCTCTGATGAACTGTTCACA +
Preference number: 6 (lower is better)
Translates to: GCSQVPLSTSGS*LWGSCSDELFT
Trigger: TGTGAACAGTTCATCAGAGCAGGAGCCCCAGAGGCAGCTTCCGGAGGTGCTAAGTGGCACCTGGGAACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 72 bp CTCTGTAGGGAGAGTGGCATGGCCCTGGTGCAGCCTTaGCCCAAAATGGACTGCCACTATGATGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: LCRESGMALVQP*PKMDCHYDADC
Trigger: GCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCCATGCCACTCTCCCTACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 72 bp CGCTCTCCTGCGCTTGCACTTCCTTCCGGGAACATCTaGGCTACCCTGGGCTCTGCCCTTAACTCTGATAGT +
Preference number: 6 (lower is better)
Translates to: RSPALALPSGNI*ATLGSALNSDS
Trigger: ACTATCAGAGTTAAGGGCAGAGCCCAGGGTAGCCCAGATGTTCCCGGAAGGAAGTGCAAGCGCAGGAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671802.1
CDS GCA 72 bp GGCATGGCCCTGGTGCAGCCTTGGCCCAAAATGGACTaGCACTATGATGCAGACTGCCAGCAGAACAAAGAC +
Preference number: 6 (lower is better)
Translates to: GMALVQPWPKMD*HYDADCQQNKD
Trigger: GTCTTTGTTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS CCA 72 bp AGAGTGGCATGGCCCTGGTGCAGCCTTGGCCCAAAATaGACTGCCACTATGATGCAGACTGCCAGCAGAACA +
Preference number: 6 (lower is better)
Translates to: RVAWPWCSLGPK*TATMMQTASRT
Trigger: TGTTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGGGCCATGCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS TCA 72 bp CCTGGTGCAGCCTTGGCCCAAAATGGACTGCCACTATaGTGCAGACTGCCAGCAGAACAAAGACAGCGACAA +
Preference number: 6 (lower is better)
Translates to: PGAALAQNGLPL*CRLPAEQRQRQ
Trigger: TTGTCGCTGTCTTTGTTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGGCTGCACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1
CDS GCA 72 bp CCTTGGCCCAAAATGGACTGCCACTATGATGCAGACTaGCAGCAGAACAAAGACAGCGACAATGACGGTGAC +
Preference number: 6 (lower is better)
Translates to: PWPKMDCHYDAD*QQNKDSDNDGD
Trigger: GTCACCGTCATTGTCGCTGTCTTTGTTCTGCTGGCAGTCTGCATCATAGTGGCAGTCCATTTTGGGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637503.2
ENST00000671802.1