Pregenerated sensors for SMIM28 (Homo sapiens)
Ensembl gene IDs: ENSG00000262543Ensembl transcript IDs: ENST00000573100.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCCAAGCTTTGCCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTaGCCAATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: LPSFALSLKCPIVRG*PMNSSFLGLGALLP Trigger: AGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCATTGGCCAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR GCA 90 bp | AAGGAATGTGAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTaGCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTGGCCAATGAA | + |
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Preference number: 1 (lower is better) Translates to: KECEDRLTRLAFAKL*PQPEVPHCQRLANE Trigger: TTCATTGGCCAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTCACATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR TCA 90 bp | TCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCTGTGTTTTGTATaGTTCCCAAGAGCAGTTTATTTTTGCTCTTCCAGTCCAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SSHGCCIKGGELCFV*FPRAVYFCSSSPGE Trigger: CTCACCTGGACTGGAAGAGCAAAAATAAACTGCTCTTGGGAATCATACAAAACACAGCTCTCCACCTTTAATACAGCACCCATGAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CAA 90 bp | CTGAAGTGCCCCATTGTCAGAGGTTGGCCAATGAATAGCAGCTTCTaGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTA | + |
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Preference number: 2 (lower is better) Translates to: LKCPIVRGWPMNSSF*GLGALLPLLMGAVL Trigger: TAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCATTGGCCAACCTCTGACAATGGGGCACTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CAA 90 bp | CCTGGGAAACTTTCCCCTAAGGAATGTGAAGATAGGTTAACCAGATaGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGCCCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: PGKLSPKECEDRLTR*AFAKLCPQPEVPHC Trigger: ACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTCACATTCCTTAGGGGAAAGTTTCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTGAGAGCAGTTTATTTTTaGTCTTCCAGTCCAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LAFAKLCPQPEVPHCQRLRAVYF*SSSPGE Trigger: CTCACCTGGACTGGAAGAGCAAAAATAAACTGCTCT...CAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGTCTTTTACTCCTGCTAGAACTCTCTATATCTTGGAGCATTCATACAGAAGCTTTGCCCTCAGCCTaGAGTGCCCCATTGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RCLLLLLELSISWSIHTEALPSA*SAPLSE Trigger: CTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGC...TTCTGTATGAATGCTCCAAGATATAGAGAGTTCTAGCAGGAGTAAAAGACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGCCCATTGTCAGAGGTTaGCCAATGAATAGCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VGRKVLFGGKSSYLWLVQPIVRG*PMNSSF Trigger: GAAGCTGCTATTCATTGGCCAACCTCTGACAATGGG...CTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CAA 90 bp | CTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCTGTGTTTaGTATGATTCCCAAGAGCAGTTTATTTTTGCTCTTCCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LPLLMGAVLKVESCV*YDSQEQFIFALPVQ Trigger: CTGGACTGGAAGAGCAAAAATAAACTGCTCTTGGGAATCATACAAAACACAGCTCTCCACCTTTAATACAGCACCCATGAGAAGAGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGCAGAGCCTGTTCCTGTaGTCATTAGTAATTAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TGVGRKVLFGGKSSYLWLQSLFL*SLVIKC Trigger: ACACTTAATTACTAATGAGCACAGGAACAGGCTCTG...CAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR TCA 90 bp | AGATGTCTTTTACTCCTGCTAGAACTCTCTATATCTTGGAGCATTCATACAGAAGAGCTGTGTTTTGTATaGTTCCCAAGAGCAGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: RCLLLLLELSISWSIHTEELCFV*FPRAVY Trigger: ATAAACTGCTCTTGGGAATCATACAAAACACAGCTC...TTCTGTATGAATGCTCCAAGATATAGAGAGTTCTAGCAGGAGTAAAAGACATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CCA 72 bp | TTTGCCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTaGCCAATGAATAGCAGCTTCTTGGGTCTAGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: FALSLKCPIVRG*PMNSSFLGLGA Trigger: GGCCCCTAGACCCAAGAAGCTGCTATTCATTGGCCAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR GCA 72 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTaGCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: EDRLTRLAFAKL*PQPEVPHCQRL Trigger: CAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGATAGGTTAACCAGATaGGCATTTGCCAAGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRDRLTR*AFAKLC Trigger: GCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATC...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR-3UTR CAA 90 bp | AGATGTCTTTTACTCCTGCTAGAACTCTCTATATCTTGGAGCATTCATACAGAAGTGGAGAGCTGTGTTTaGTATGATTCCCAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: RCLLLLLELSISWSIHTEVESCV*YDSQEQ Trigger: CTGCTCTTGGGAATCATACAAAACACAGCTCTCCAC...TTCTGTATGAATGCTCCAAGATATAGAGAGTTCTAGCAGGAGTAAAAGACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CCA 72 bp | AGATGTCTTTTACTCCTGCTAGAACTCTCTATATCTTaGAGCATTCATACAGAAGTGAAACAAACCATGAAA | + |
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Preference number: 3 (lower is better) Translates to: RCLLLLLELSIS*SIHTEVKQTMK Trigger: TTTCATGGTTTGTTTCACTTCTGTATGAATGCTCCAAGATATAGAGAGTTCTAGCAGGAGTAAAAGACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | GGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCGGCTCCACATCCTCCTaGGTGGAGCTCACCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLGALLPLLMGAVLKVESGSTSS*VELTPW Trigger: CCAGGGGGTGAGCTCCACCCAGGAGGATGTGGAGCC...GCTCTCCACCTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | ATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTACCCCCTGGGTGCCCTaGAGCTGGGTCTCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: MNSSFLGLGALLPLLMGATPWVP*SWVSRR Trigger: TCTCCTGGAGACCCAGCTGCAGGGCACCCAGGGGGT...AGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCTTTGCCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTGGCCAATGAATGGGGCGGTGGGGACTTaGAGCGGCGGTACAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PSFALSLKCPIVRGWPMNGAVGT*SGGTGT Trigger: TGTTCCTGTACCGCCGCTGCAAGTCCCCACCGCCCC...ATTCATTGGCCAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTTGGGTGCCCTGCAGCTaGGTCTCCAGGAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: MNSSFLGLGALLPLLMGAWVPCS*VSRRGR Trigger: CCTGCCTCTCCTGGAGACCCAGCTGCAGGGCACCCA...AGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGCTCACCCCCTaGGTGCCCTGCAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKVELTP*VPCSWV Trigger: GACCCAGCTGCAGGGCACCCAGGGGGTGAGCTCCAC...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCTGGCCGGCAGAAGGATaGACAGGAAGGGCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: GLGALLPLLMGAVLKVESWPAEG*TGRAPH Trigger: ATGTGGAGCCCTTCCTGTGCATCCTTCTGCCGGCCA...GCTCTCCACCTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGAGGGCGGTAAACACTaGGAGGGGAGAGTGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKEGGKH*EGRVAS Trigger: GGAGGCCACTCTCCCCTCCCAGTGTTTACCGCCCTC...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | GGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCGGCCTGGATCCAGTTTaGATGTGCTTGGCTGATGGC | + |
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Preference number: 4 (lower is better) Translates to: GLGALLPLLMGAVLKVESGLDPV*MCLADG Trigger: GCCATCAGCCAAGCACATCCAAACTGGATCCAGGCC...GCTCTCCACCTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGCAAACTTCTTCCAGCTaGTGCCCAGCAGTCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKQTSSS*CPAVPA Trigger: TGCGGGGACTGCTGGGCAGCAGCTGGAAGAAGTTTG...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | ATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTTCTCCTGCAGGTGGGTaGTCTGGTAGGTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: MNSSFLGLGALLPLLMGASPAGG*SGRSML Trigger: CAGCATTGACCTACCAGAGCACCCACCTGCAGGAGA...AGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGATCCAGCTGATGCCCTaGCCACCCTTCCACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKIQLMP*PPFHLA Trigger: AGCAAGGTGGAAGGGTGGCCAGGGCATCAGCTGGAT...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGCTGCCCCTGGGGCGGTaGGGACTTGCAGCGGCGGTA | + |
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Preference number: 4 (lower is better) Translates to: TGVGRKVLFGGKSSYLWLLPLGR*GLAAAV Trigger: TACCGCCGCTGCAAGTCCCCACCGCCCCAGGGGCAG...CAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CAA 72 bp | CCCATTGTCAGAGGTTGGCCAATGAATAGCAGCTTCTaGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: PIVRGWPMNSSF*GLGALLPLLMG Trigger: ACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCATTGGCCAACCTCTGACAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | GGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCTTGGATGTGCTTGGCTaGTGGCTGTTGGTAAACTCG | + |
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Preference number: 4 (lower is better) Translates to: GLGALLPLLMGAVLKVESLDVLG*WLLVNS Trigger: CGAGTTTACCAACAGCCATCAGCCAAGCACATCCAA...GCTCTCCACCTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGAGCCCTTTTCATACTaGAGGACTGCATCCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKEPFSY*RTASLG Trigger: GCCCAGGGATGCAGTCCTTCAGTATGAAAAGGGCTC...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGCTCACCCCCTGGGTaGCCTGCAGCTGGGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VGRKVLFGGKSSYLWLVQSSPPG*PAAGSP Trigger: TGGAGACCCAGCTGCAGGGCACCCAGGGGGTGAGCT...CTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGGGGAAGTCCTCACTaGTCCAGGCCAGGCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VGRKVLFGGKSSYLWLVQRGSPH*SRPGRA Trigger: TGCCCGGCCTGGCCTGGAGCAGTGAGGACTTCCCCT...CTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | CCAAGCTTTGCCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTGGCCAATGAATGATCCAGTTTGGATGTaGTTGGCTGATGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PSFALSLKCPIVRGWPMNDPVWM*LADGCW Trigger: CCAACAGCCATCAGCCAAGCACATCCAAACTGGATC...ATTCATTGGCCAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGGTGGAGAGCTTCAACAATGCTGCTTaGTCTTGGCCTGGATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GLGALLPLLMGAVLKVESFNNAA*SWPGSS Trigger: ACTGGATCCAGGCCAAGAGCAAGCAGCATTGTTGAA...GCTCTCCACCTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGGCCCTCAGCCTGAAGTaGCCCATTGTCAGAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVALSLK*PIVRGW Trigger: CCAACCTCTGACAATGGGGCACTTCAGGCTGAGGGC...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | ACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGCTGGTAGGTCAATGCTaGACACCTGCCCCTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TGVGRKVLFGGKSSYLWLLVGQC*TPAPGA Trigger: CGCCCCAGGGGCAGGTGTTCAGCATTGACCTACCAG...CAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTTCGTCCTCTGATGAATaGCAACAGGGGAAAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: MNSSFLGLGALLPLLMGASSSDE*QQGKET Trigger: GGTTTCTTTCCCCTGTTGCCATTCATCAGAGGACGA...AGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGTTTTTGGCCTCCGGGGGCAGTaGGGAGTAGGGGAAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: EKFYLVAKVVTFGWSRVFGLRGQ*GVGEVL Trigger: GAGGACTTCCCCTACTCCCCACTGCCCCCGGAGGCC...AAAAACTCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | TTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGCCCCATTGTCAGAGGTTGAGATTTCAACAATGCTaGTTGCTCTTGGCCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: LAFAKLCPQPEVPHCQRLRFQQC*LLLAWI Trigger: GATCCAGGCCAAGAGCAAGCAGCATTGTTGAAATCT...CAACCTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGAATGCTGCTTGCTCTTaGCCTGGATCCAGTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKNAACS*PGSSLD Trigger: ATCCAAACTGGATCCAGGCCAAGAGCAAGCAGCATT...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGCTTTGCCCTCAGCCTaGAGTGCCCCATTGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRALPSA*SAPLSE Trigger: CTCTGACAATGGGGCACTTCAGGCTGAGGGCAAAGC...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGTTTTTTCAATGCTGAACACCTaGCCCTGGGGCGGTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EKFYLVAKVVTFGWSRVFSMLNT*PWGGGD Trigger: GTCCCCACCGCCCCAGGGGCAGGTGTTCAGCATTGA...AAAAACTCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AAACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCCCAGGAAGAGCAGGATaGTGGCCGGCAGAAGGATGC | + |
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Preference number: 4 (lower is better) Translates to: KLVWEEKFYLVAKVVTFGPGRAG*WPAEGC Trigger: GCATCCTTCTGCCGGCCACCATCCTGCTCTTCCTGG...GCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | AAACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCACTTCTTCCAGCTGCTaGCCAGCAGTCCCCGCATGT | + |
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Preference number: 4 (lower is better) Translates to: KLVWEEKFYLVAKVVTFGTSSSC*PAVPAC Trigger: ACATGCGGGGACTGCTGGGCAGCAGCTGGAAGAAGT...GCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGATTCATACTGAAGGACTaGATCCCTGGGCCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRFILKD*IPGPPP Trigger: GGGAGGAGGCCCAGGGATGCAGTCCTTCAGTATGAA...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTATTAAAGAGAGCAGTTTATTTTTaGTCTTCCAGTCCAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SFLGLGALLPLLMGAVLKRAVYF*SSSPGE Trigger: CTCACCTGGACTGGAAGAGCAAAAATAAACTGCTCT...CTTTAATACAGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGCCCTCTTCTCATGGGTaGTGTATTAAAGGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVPSSHG*CIKGGE Trigger: CTCTCCACCTTTAATACAGCACCCATGAGAAGAGGG...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCGCAGGCCGGGCTCGCTaGTTAACCACTCATATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSAGRAR*LTTHMS Trigger: GGACATATGAGTGGTTAACCAGCGAGCCCGGCCTGC...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCGGAAGAGCAGGATGGTaGCCGGCAGAAGGATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSGRAGW*PAEGCT Trigger: TGTGCATCCTTCTGCCGGCCACCATCCTGCTCTTCC...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCCAGGAGGATTTCTGGTaGCCTCTTCGTAGGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSQEDFW*PLRRRA Trigger: CGCCCTCCTACGAAGAGGCCACCAGAAATCCTCCTG...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCCCCCAGGAGGATTTCTaGTGGCCTCTTCGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSPQEDF*WPLRRR Trigger: CCTCCTACGAAGAGGCCACCAGAAATCCTCCTGGGG...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| 3UTR CAA 72 bp | CTTTCCCCTAAGGAATGTGAAGATAGGTTAACCAGATaGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPKECEDRLTR*AFAKLCPQPEV Trigger: CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTCACATTCCTTAGGGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCGCATTTGCCAAGCTTTaGCCTCAGCCTGAAGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSAFAKL*PQPEVP Trigger: GGGCACTTCAGGCTGAGGGCAAAGCTTGGCAAATGC...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AAACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGCTTGCTCTTGGCCTaGATCCAGTTTGGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLVWEEKFYLVAKVVTFGCLLLA*IQFGCA Trigger: AGCACATCCAAACTGGATCCAGGCCAAGAGCAAGCA...GCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGGAAACCCTGAAAAACTaGTGTGGGAAGAAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVETLKN*CGKKSS Trigger: AGAACTTTTCTTCCCACACCAGTTTTTCAGGGTTTC...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCCTCTTCCAGTCCAGGTaGGCCCTTTTCATACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSLFQSR*ALFILK Trigger: CTTCAGTATGAAAAGGGCTCACCTGGACTGGAAGAG...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | ACCATTATTTACAACACAACTATCCCCTGCAGTTCTAGAGATGTCTTTTACTCCTCAGAGGTTGGCCAATaGATAGCAGCTTCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TIIYNTTIPCSSRDVFYSSEVGQ*IAASWV Trigger: GACCCAAGAAGCTGCTATTCATTGGCCAACCTCTGA...GGAGTAAAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTTGTAAATAATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGACAAACCATGAAACCCTaGAAAACTGGTGTGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRQTMKP*KTGVGR Trigger: TCTTCCCACACCAGTTTTTCAGGGTTTCATGGTTTG...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | GAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGTTTTTCCCAGATTTCAACAATaGTGCTTGCTCTTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKFYLVAKVVTFGWSRVFPRFQQ*CLLLAW Trigger: CCAGGCCAAGAGCAAGCAGCATTGTTGAAATCTGGG...AAAAACTCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGACAGTTTGGATGTGCTTaGCTGATGGCTGTTGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRQFGCA*LMAVGK Trigger: TTTACCAACAGCCATCAGCCAAGCACATCCAAACTG...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | AAACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCCCCATTGTCAGAGGTTaGCCAATGAATAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLVWEEKFYLVAKVVTFGPIVRG*PMNSSF Trigger: GAAGCTGCTATTCATTGGCCAACCTCTGACAATGGG...GCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CCA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGGAACTCTCTATATCTTaGAGCATTCATACAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVELSIS*SIHTEV Trigger: CACTTCTGTATGAATGCTCCAAGATATAGAGAGTTC...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAAACACAACTATCCCCTaGAGTTCTAGAGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRNTTIP*SSRDVF Trigger: AAAGACATCTCTAGAACTGCAGGGGATAGTTGTGTT...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR TCA 90 bp | AAACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCGAGCTGTGTTTTGTATaGTTCCCAAGAGCAGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KLVWEEKFYLVAKVVTFGELCFV*FPRAVY Trigger: ATAAACTGCTCTTGGGAATCATACAAAACACAGCTC...GCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR GCA 90 bp | AAACTGGTGTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCCAGAGCCTGTTCCTGTaGTCATTAGTAATTAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLVWEEKFYLVAKVVTFGQSLFL*SLVIKC Trigger: ACACTTAATTACTAATGAGCACAGGAACAGGCTCTG...GCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCACACCAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS GCA 90 bp | ACCTCTCCTGCAGGTGGGTGCTCTGGTAGGTCAATGCTGAACACCTaGCCCTGGGGCGGTGGGGACTTGCAGCGGCGGTACAGGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSPAGGCSGRSMLNT*PWGGGDLQRRYRNS Trigger: GCTGTTCCTGTACCGCCGCTGCAAGTCCCCACCGCCCCAGGGGCAGGTGTTCAGCATTGACCTACCAGAGCACCCACCTGCAGGAGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS CCA 90 bp | CCTGCAGGTGGGTGCTCTGGTAGGTCAATGCTGAACACCTGCCCCTaGGGCGGTGGGGACTTGCAGCGGCGGTACAGGAACAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PAGGCSGRSMLNTCP*GGGDLQRRYRNSSR Trigger: TCTGCTGCTGTTCCTGTACCGCCGCTGCAAGTCCCCACCGCCCCAGGGGCAGGTGTTCAGCATTGACCTACCAGAGCACCCACCTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS CCA 90 bp | AGCGGCGGTACAGGAACAGCAGCAGAAATGCCAGGAAGAGCAGGATaGTGGCCGGCAGAAGGATGCACAGGAAGGGCTCCACATCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGGTGTAAEMPGRAG*WPAEGCTGRAPHPP Trigger: AGGAGGATGTGGAGCCCTTCCTGTGCATCCTTCTGCCGGCCACCATCCTGCTCTTCCTGGCATTTCTGCTGCTGTTCCTGTACCGCCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS GCA 90 bp | CCCGCATGTTTTCATCCAGCTGATGCCCTGGCCACCCTTCCACCTTaGTGCCCAGATTTCAACAATGCTGCTTGCTCTTGGCCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: PACFHPADALATLPP*CPDFNNAACSWPGS Trigger: GGATCCAGGCCAAGAGCAAGCAGCATTGTTGAAATCTGGGCAGCAAGGTGGAAGGGTGGCCAGGGCATCAGCTGGATGAAAACATGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGTGGGGCGGTGGGGACTaGCAGCGGCGGTACAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVWGGGD*QRRYRN Trigger: GTTCCTGTACCGCCGCTGCAAGTCCCCACCGCCCCA...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | ATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTATGAATAGCAGCTTCTaGGGTCTAGGGGCCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MNSSFLGLGALLPLLMGAMNSSF*GLGALL Trigger: GAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT...AGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS TCA 90 bp | AATGCTGCTTGCTCTTGGCCTGGATCCAGTTTGGATGTGCTTGGCTaGTGGCTGTTGGTAAACTCGTCCTCTGATGAATGGCAACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NAACSWPGSSLDVLG*WLLVNSSSDEWQQG Trigger: CCCCTGTTGCCATTCATCAGAGGACGAGTTTACCAACAGCCATCAGCCAAGCACATCCAAACTGGATCCAGGCCAAGAGCAAGCAGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | ATGAATAGCAGCTTCTTGGGTCTAGGGGCCCTTCTCCCTCTTCTCATGGGTGCTGTGGAGAGCTGTGTTTaGTATGATTCCCAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MNSSFLGLGALLPLLMGAVESCV*YDSQEQ Trigger: CTGCTCTTGGGAATCATACAAAACACAGCTCTCCAC...AGCACCCATGAGAAGAGGGAGAAGGGCCCCTAGACCCAAGAAGCTGCTATTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS TCA 90 bp | TGTATGATTCCCAAGAGCAGTTTATTTTTGCTCTTCCAGTCCAGGTaGGCCCTTTTCATACTGAAGGACTGCATCCCTGGGCCTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CMIPKSSLFLLFQSR*ALFILKDCIPGPPP Trigger: GGGAGGAGGCCCAGGGATGCAGTCCTTCAGTATGAAAAGGGCTCACCTGGACTGGAAGAGCAAAAATAAACTGCTCTTGGGAATCATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGACAATGCTGCTTGCTCTaGGCCTGGATCCAGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WEEKFYLVAKVVTFGWSRQCCLL*AWIQFG Trigger: TCCAAACTGGATCCAGGCCAAGAGCAAGCAGCATTG...TCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | GTGGGAAGAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGTTTCAACAATGCTGCTaGCTCTTGGCCTGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGRKVLFGGKSSYLWLVQFQQCC*LLAWIQ Trigger: CTGGATCCAGGCCAAGAGCAAGCAGCATTGTTGAAA...CTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTCTTCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGGAAGAAAAGTTCTATTaGGTGGCAAAAGTAGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVEEKFY*VAKVVT Trigger: GGTAACTACTTTTGCCACCAAATAGAACTTTTCTTC...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | GAAGATAGGTTAACCAGATTGGCATTTGCCAAGCTTTGCCCTCAGCCTGAAGTGAGAACTCTCTATATCTaGGAGCATTCATACAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EDRLTRLAFAKLCPQPEVRTLYI*EHSYRS Trigger: ACTTCTGTATGAATGCTCCAAGATATAGAGAGTTCT...CACTTCAGGCTGAGGGCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGTTCTATTTGGTGGCAAAAGTAGTTACCTTTGGCTGGTCCAGAGTTTTTGATAGGTTAACCAGATaGGCATTTGCCAAGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EKFYLVAKVVTFGWSRVFDRLTR*AFAKLC Trigger: GCAAAGCTTGGCAAATGCCAATCTGGTTAACCTATC...AAAAACTCTGGACCAGCCAAAGGTAACTACTTTTGCCACCAAATAGAACTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS GCA 72 bp | GCAGGTGGGTGCTCTGGTAGGTCAATGCTGAACACCTaGCCCTGGGGCGGTGGGGACTTGCAGCGGCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AGGCSGRSMLNT*PWGGGDLQRRY Trigger: GTACCGCCGCTGCAAGTCCCCACCGCCCCAGGGGCAGGTGTTCAGCATTGACCTACCAGAGCACCCACCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS GCA 72 bp | CCGGGCAGGAGGTCTGTCACCTCTCCTGCAGGTGGGTaGTCTGGTAGGTCAATGCTGAACACCTGCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRRSVTSPAGG*SGRSMLNTCPW Trigger: CCAGGGGCAGGTGTTCAGCATTGACCTACCAGAGCACCCACCTGCAGGAGAGGTGACAGACCTCCTGCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS CCA 72 bp | TGCATCCCTGGGCCTCCTCCCCAGGAGGATTTCTGGTaGCCTCTTCGTAGGAGGGCGGTAAACACTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CIPGPPPQEDFW*PLRRRAVNTGR Trigger: CCTCCCAGTGTTTACCGCCCTCCTACGAAGAGGCCACCAGAAATCCTCCTGGGGAGGAGGCCCAGGGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS CCA 72 bp | GACTGCATCCCTGGGCCTCCTCCCCAGGAGGATTTCTaGTGGCCTCTTCGTAGGAGGGCGGTAAACACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DCIPGPPPQEDF*WPLRRRAVNTG Trigger: CCCAGTGTTTACCGCCCTCCTACGAAGAGGCCACCAGAAATCCTCCTGGGGAGGAGGCCCAGGGATGCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS CCA 72 bp | GGAACAGCAGCAGAAATGCCAGGAAGAGCAGGATGGTaGCCGGCAGAAGGATGCACAGGAAGGGCTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GTAAEMPGRAGW*PAEGCTGRAPH Trigger: ATGTGGAGCCCTTCCTGTGCATCCTTCTGCCGGCCACCATCCTGCTCTTCCTGGCATTTCTGCTGCTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS GCA 72 bp | TTTCATCCAGCTGATGCCCTGGCCACCCTTCCACCTTaGTGCCCAGATTTCAACAATGCTGCTTGCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FHPADALATLPP*CPDFNNAACSW Trigger: CCAAGAGCAAGCAGCATTGTTGAAATCTGGGCAGCAAGGTGGAAGGGTGGCCAGGGCATCAGCTGGATGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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| CDS TCA 72 bp | TGCTCTTGGCCTGGATCCAGTTTGGATGTGCTTGGCTaGTGGCTGTTGGTAAACTCGTCCTCTGATGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: CSWPGSSLDVLG*WLLVNSSSDEW Trigger: CCATTCATCAGAGGACGAGTTTACCAACAGCCATCAGCCAAGCACATCCAAACTGGATCCAGGCCAAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573100.2 |
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