Pregenerated sensors for SMIM27 (Homo sapiens)
Ensembl gene IDs: ENSG00000235453Ensembl transcript IDs: ENST00000425533.1, ENST00000450093.3, ENST00000451672.2, ENST00000453396.5, ENST00000635960.1, ENST00000644531.1
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTGCGCAAGGGCTACCTCTGCTTCTAGCTCCCTCGTACGAGGATaGCATGGAGCTGACCGAAGCGTCCTCGACGATGCCGAGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: CCARATSASSSLVRG*HGADRSVLDDAELV Trigger: CACCAGCTCGGCATCGTCGAGGACGCTTCGGTCAGCTCCATGCCATCCTCGTACGAGGGAGCTAGAAGCAGAGGTAGCCCTTGCGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR TCA 90 bp | ATTTCTTCCTTAGCTGTCGTCTTGCAGACACCATCGAAGCATAGATaGTGCAGCCCCAGGAGATTAAAACGATGGCAAGCAGCAACTAAA | + |
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Preference number: 1 (lower is better) Translates to: ISSLAVVLQTPSKHR*CSPRRLKRWQAATK Trigger: TTTAGTTGCTGCTTGCCATCGTTTTAATCTCCTGGGGCTGCATCATCTATGCTTCGATGGTGTCTGCAAGACGACAGCTAAGGAAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| 3UTR CCA 90 bp | AATAGGACAGTCCAAGGAGAGGGAGAGAGGTGGGGAATGGCCAGTTaGTGGAACAGTCACAACACACAACATTTACTTATTAAATTCACT | + |
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Preference number: 1 (lower is better) Translates to: NRTVQGEGERWGMAS*WNSHNTQHLLIKFT Trigger: AGTGAATTTAATAAGTAAATGTTGTGTGTTGTGACTGTTCCACCAACTGGCCATTCCCCACCTCTCTCCCTCTCCTTGGACTGTCCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAGCTCCTGCTCCTCCATaGTGGGTGCAGAGGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVAPAPP*WVQRLR Trigger: CCTGAGCCTCTGCACCCACCATGGAGGAGCAGGAGC...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAAAGCGTCCTCGACGATaGCGAGCTGGTGCTGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVKRPRR*RAGAAH Trigger: GTGAGCAGCACCAGCTCGGCATCGTCGAGGACGCTT...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCACGAGGAAGTTTGGCATaGCGGGCAGGAGCTGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: SKMALSFWDRFPAHASFARGSLA*RAGAAG Trigger: CCCGGCAGCTCCTGCCCGCCATGCCAAACTTCCTCG...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATTGGTGTAGAGCCCTGTaGCTGGGGCCTGGACCAGCT | + |
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Preference number: 2 (lower is better) Translates to: THAVSKMALSFWDRFPAHWCRAL*LGPGPA Trigger: AGCTGGTCCAGGCCCCAGTCACAGGGCTCTACACCA...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR GCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATACGATGCCGAGCTGGTaGTGCTCACCTCACGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: THAVSKMALSFWDRFPAHTMPSW*CSPHAR Trigger: CCTGGCGTGAGGTGAGCAGCACCAGCTCGGCATCGT...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATCCTGTGACTGGGGCCTaGACCAGCTTGAGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: THAVSKMALSFWDRFPAHPVTGA*TSLSSW Trigger: CCAGCTGCTCAAGCTGGTCCAGGCCCCAGTCACAGG...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGGACCCGCTGTGGTTTaGAGGCTTGGAGTCCCGATT | + |
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Preference number: 2 (lower is better) Translates to: SKMALSFWDRFPAHASFAGPAVV*RLGVPI Trigger: AATCGGGACTCCAAGCCTTCAAACCACAGCGGGTCC...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGCAGGGCTATGTGAGTaGCATCGGGTGCTTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SKMALSFWDRFPAHASFAAGLCE*HRVLPQ Trigger: CTGAGGAAGCACCCGATGTCACTCACATAGCCCTGC...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCATCCCTCGTACGAGGATaGCATGGAGCTGACCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SKMALSFWDRFPAHASFASLVRG*HGADRS Trigger: GCTTCGGTCAGCTCCATGCCATCCTCGTACGAGGGA...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCTGAGGACCCGCTGTaGTTTGAAGGCTTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: THAVSKMALSFWDRFPAHAEDPL*FEGLES Trigger: GGACTCCAAGCCTTCAAACCACAGCGGGTCCTCAGC...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAACCAGCTTGAGCAGCTaGCCAGCGGGTGCCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSTSLSS*PAGATA Trigger: GGCAGTGGCACCCGCTGGCCAGCTGCTCAAGCTGGT...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTAGGATGGCATGGAGCTaGCCGAAGCGTCCTCGACGA | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQARMAWS*PKRPRR Trigger: TCGTCGAGGACGCTTCGGTCAGCTCCATGCCATCCT...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGCCATCTCGACTCACTaGAACCTCCGCCTCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAAISTH*NLRLPG Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGTCGAGATGGC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAACCTCACGCCAGGCCTaGCAGGGCTATGTGAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSTSRQA*QGYVSD Trigger: GTCACTCACATAGCCCTGCCAGGCCTGGCGTGAGGT...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGTAGAGCCCTGTGACTaGGGCCTGGACCAGCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAVEPCD*GLDQLE Trigger: CTCAAGCTGGTCCAGGCCCCAGTCACAGGGCTCTAC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCACAGGCTGGAGTGCGGTaGTGCCATCTCGACTCACTG | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSQAGVR*CHLDSL Trigger: CAGTGAGTCGAGATGGCACCACCGCACTCCAGCCTG...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATCACTCAGGCTGGAGTaGGGTGGTGCCATCTCGACT | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSSLRLE*GGAIST Trigger: AGTCGAGATGGCACCACCGCACTCCAGCCTGAGTGA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGGGGCCCAGAGGCGTTaGGTACATCTGCAGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQGAQRR*VHLQCS Trigger: GGAGCACTGCAGATGTACTCAACGCCTCTGGGCCCC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGCGGGTGCTTCCTCAGTaGTTTTCGCCAGCCGCACGC | + |
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Preference number: 2 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQRVLPQ*FSPAAR Trigger: GCGTGCGGCTGGCGAAAAGCACTGAGGAAGCACCCG...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGCCTGGCAGGGCTATGTaGGTGACATCGGGTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQPGRAM*VTSGAS Trigger: GGAAGCACCCGATGTCACTCACATAGCCCTGCCAGG...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGGAGAGGGAGAGAGGTaGGGAATGGCCAGTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQGEGER*GMASWW Trigger: CCACCAACTGGCCATTCCCCACCTCTCTCCCTCTCC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGCAAATCAGCTGAGGTaGGGAGTTCAAGATCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAANQLR*GVQDQP Trigger: AGGCTGATCTTGAACTCCTCACCTCAGCTGATTTGC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTAATAGTGACAAAGTTTaGGGCCAGGCATGGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQANSDKV*GQAWWL Trigger: GAGCCACCATGCCTGGCCTCAAACTTTGTCACTATT...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTTTAGCAAAATGGCACTaGGTTTCTGGGATCGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQALAKWH*VSGIGS Trigger: GGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAA...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATTCAAGCAATTCTCCTaGCTCAGCCTACCAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSFKQFS*LSLPSS Trigger: GCTACTTGGTAGGCTGAGGCAGGAGAATTGCTTGAA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGGCACTTCAGTCACATaGTCAGGCTCCACTTCTAAT | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAGTSVT*SGSTSN Trigger: ATTAGAAGTGGAGCCTGACCATGTGACTGAAGTGCC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATATGGCACAGAGACGTaGAGTGAACACATGCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSYGTET*SEHMLL Trigger: TAACAGCATGTGTTCACTTCACGTCTCTGTGCCATA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAACTCTTGTTCATGTTaGTACTTTGACCTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSNSCSC*YFDLLL Trigger: CAGGAGGAGGTCAAAGTATCAACATGAACAAGAGTT...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATGTGGTTTGAAGGCTTaGAGTCCCGATTTTGGAATA | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSCGLKA*SPDFGI Trigger: TATTCCAAAATCGGGACTCCAAGCCTTCAAACCACA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATTCATGTTGATACTTTaGCCTCCTCCTGTTAATCAC | + |
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Preference number: 2 (lower is better) Translates to: SQETTLFAHPKGAPSHLSFMLIL*PPPVNH Trigger: GTGATTAACAGGAGGAGGTCAAAGTATCAACATGAA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGGAATGGCCAGTTGGTaGAACAGTCACAACACACAA | + |
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Preference number: 2 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQGMASW*NSHNTQ Trigger: TTGTGTGTTGTGACTGTTCCACCAACTGGCCATTCC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGCACAGAGACGTGAAGTaGACACATGCTGTTAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQHRDVK*THAVSK Trigger: TTTGCTAACAGCATGTGTTCACTTCACGTCTCTGTG...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTCTACCAAGTAGCTTTTaGTATGAAGTGAGAAACATG | + |
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Preference number: 2 (lower is better) Translates to: KKPLCLLIQKEHLLIYQALPSSF*YEVRNM Trigger: CATGTTTCTCACTTCATATCAAAAGCTACTTGGTAG...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR CCA 72 bp | AGGGCTACCTCTGCTTCTAGCTCCCTCGTACGAGGATaGCATGGAGCTGACCGAAGCGTCCTCGACGATGCC | + |
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Preference number: 3 (lower is better) Translates to: RATSASSSLVRG*HGADRSVLDDA Trigger: GGCATCGTCGAGGACGCTTCGGTCAGCTCCATGCCATCCTCGTACGAGGGAGCTAGAAGCAGAGGTAGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTACGGGGCCCAGAGGCGTaGAGTACATCTGCAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVRGPEA*STSAVL Trigger: GAGCACTGCAGATGTACTCAACGCCTCTGGGCCCCG...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR TCA 72 bp | TTAGCTGTCGTCTTGCAGACACCATCGAAGCATAGATaGTGCAGCCCCAGGAGATTAAAACGATGGCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LAVVLQTPSKHR*CSPRRLKRWQA Trigger: TGCTTGCCATCGTTTTAATCTCCTGGGGCTGCATCATCTATGCTTCGATGGTGTCTGCAAGACGACAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGGACCCGCTGTGGTTaGAAGGCTTGGAGTCCCGAT | + |
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Preference number: 3 (lower is better) Translates to: SQETTLFAHPKGAPSHLSRTRCG*KAWSPD Trigger: ATCGGGACTCCAAGCCTTCAAACCACAGCGGGTCCT...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CAA 90 bp | GGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTGAAATCTACCTGATACCCGTCAGGTTACCGTaGCCATTGCTAAGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GKQQLNQKSQRRCEIYLIPVRLP*PLLRWE Trigger: TTCCCACCTTAGCAATGGCAACGGTAACCTGACGGG...TATCAGGTAGATTTCACACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGGCAGGAGAATCCCTaGAACCTGGGAGAAGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: SQETTLFAHPKGAPSHLSRQENP*NLGEGG Trigger: ACCTCCTTCTCCCAGGTTCAAGGGATTCTCCTGCCT...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR TCA 72 bp | AAAGGAGCACCTTCTCATCTATCAAGCTTTATCATGTaGTGGAGGCACTTCAGTCACATGGTCAGGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: KGAPSHLSSFIM*WRHFSHMVRLH Trigger: GTGGAGCCTGACCATGTGACTGAAGTGCCTCCATCACATGATAAAGCTTGATAGATGAGAAGGTGCTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCACTGTGGTTTGAAGGCTaGGAGTCCCGATTTTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SQETTLFAHPKGAPSHLSLWFEG*ESRFWN Trigger: ATTCCAAAATCGGGACTCCAAGCCTTCAAACCACAG...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR TCA 72 bp | GGGAGAATTACCAAAATATGGCACAGAGACGTGAAGTaGACACATGCTGTTAGCAAAATGGCACTGAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: GRITKIWHRDVK*THAVSKMALSF Trigger: GAAACTCAGTGCCATTTTGCTAACAGCATGTGTTCACTTCACGTCTCTGTGCCATATTTTGGTAATTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR CCA 72 bp | CAAGCTTTATCATGTGATGGAGGCACTTCAGTCACATaGTCAGGCTCCACTTCTAATTCTAGTTCTTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: QALSCDGGTSVT*SGSTSNSSSFA Trigger: AGCAAAAGAACTAGAATTAGAAGTGGAGCCTGACCATGTGACTGAAGTGCCTCCATCACATGATAAAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| 3UTR-3UTR CAA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGATTTTCCATTTTCTTaGCCTAGATCCATCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KKPLCLLIQKEHLLIYQADFPFS*PRSIRG Trigger: TCCTCTGATGGATCTAGGCAAAGAAAATGGAAAATC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGTCTCAAGAAACCACTTaGTTTGCTCATCCAAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQSQETT*FAHPKG Trigger: TCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATCTCCCAGGCGGTGGCTaGCAGGCGCCAGCAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: THAVSKMALSFWDRFPAHLPGGG*QAPAAI Trigger: GATGGCTGCTGGCGCCTGGCAGCCACCGCCTGGGAG...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAACGATGCCGAGCTGGTaGTGCTCACCTCACGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVTMPSW*CSPHAR Trigger: CCTGGCGTGAGGTGAGCAGCACCAGCTCGGCATCGT...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAACCTCACGCCAGGCCTaGCAGGGCTATGTGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVTSRQA*QGYVSD Trigger: GTCACTCACATAGCCCTGCCAGGCCTGGCGTGAGGT...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCATGGTGTAGAGCCCTGTaGCTGGGGCCTGGACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFAWCRAL*LGPGPA Trigger: AGCTGGTCCAGGCCCCAGTCACAGGGCTCTACACCA...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCACCTGGCAGGGCTATGTaGGTGACATCGGGTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFAPGRAM*VTSGAS Trigger: GGAAGCACCCGATGTCACTCACATAGCCCTGCCAGG...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAAAGCGTCCTCGACGATaGCGAGCTGGTGCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFAKRPRR*RAGAAH Trigger: GTGAGCAGCACCAGCTCGGCATCGTCGAGGACGCTT...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCTCCTGCTCCTCCATaGTGGGTGCAGAGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: THAVSKMALSFWDRFPAHAPAPP*WVQRLR Trigger: CCTGAGCCTCTGCACCCACCATGGAGGAGCAGGAGC...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCATCTCGACTCACTaGAACCTCCGCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: THAVSKMALSFWDRFPAHAISTH*NLRLPG Trigger: ACCTGGGAGGCGGAGGTTGCAGTGAGTCGAGATGGC...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAAAATCCAGTCCAGCGTaGGACGACTTACTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVKSSPA*DDLLAS Trigger: TGAAGCCAGTAAGTCGTCGCACGCTGGACTGGATTT...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCACTGGGAGAAGGAGGTTaGAGTGAGCCAAGATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFALGEGG*SEPRSH Trigger: GTGCGATCTTGGCTCACTGCAACCTCCTTCTCCCAG...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCACGTGCGACGACTTACTaGCTTCATGGTAAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFARATTY*LHGKEA Trigger: CGCCTCCTTACCATGAAGCCAGTAAGTCGTCGCACG...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTGAAATCTACCTGATAAGTGAGTCGACACGGTaGGGGCCCGCGATCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQQLNQKSQRRCEIYLISESTR*GPAIPG Trigger: CCCGGGGATCGCGGGCCCCCACCGTGTCGACTCACT...TATCAGGTAGATTTCACACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR TCA 90 bp | AAATCGCAAAGGAGGTGTGAAATCTACCTGATATTTCCCCTCGCCCCCGTCAGGGAGGCGGAGTCGAGGTaGGGGAGTGAAATGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSQRRCEIYLIFPLAPVREAESR*GSEMLN Trigger: ATTAAGCATTTCACTCCCTCACCTCGACTCCGCCTC...CCTGACGGGGGCGAGGGGAAATATCAGGTAGATTTCACACCTCCTTTGCGATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR CCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATAGGGTCCCTTCGACATaGACGGCTGCTTGTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: THAVSKMALSFWDRFPAHRVPST*TAACQD Trigger: ATCTTGACAAGCAGCCGTCCATGTCGAAGGGACCCT...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AAATCGCAAAGGAGGTGTGAAATCTACCTGATATTTCCCCTCGCCCCCGTCAGGCCATCGAAGCATAGATaGTGCAGCCCCAGGAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: KSQRRCEIYLIFPLAPVRPSKHR*CSPRRL Trigger: TAATCTCCTGGGGCTGCATCATCTATGCTTCGATGG...CCTGACGGGGGCGAGGGGAAATATCAGGTAGATTTCACACCTCCTTTGCGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAAACTCTTGTTCATGTTaGTACTTTGACCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVNSCSC*YFDLLL Trigger: CAGGAGGAGGTCAAAGTATCAACATGAACAAGAGTT...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | CCTGATATTTCCCCTCGCCCCCGTCAGGTTACCGTTGCCATTGCTAAGGTGGGAATCGCAAAGGAGGTGTaGAATCTACCTGATATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDISPRPRQVTVAIAKVGIAKEV*NLPDIS Trigger: GGAAATATCAGGTAGATTTCACACCTCCTTTGCGAT...TCCCACCTTAGCAATGGCAACGGTAACCTGACGGGGGCGAGGGGAAATATCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR GCA 90 bp | AGGAGATTAAAACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGGGAGCTGGCGGGAGCTaGGGGCCTTACAGTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLKRWQAATKPKIAKEVGAGGS*GPYSNL Trigger: GAGGTTACTGTAAGGCCCGCAGCTCCCGCCAGCTCC...CACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTTTTAATCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR GCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCATTCGACATGGACGGCTaGTTGTCAAGATACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFAFDMDG*LSRYSI Trigger: GATGGAGTATCTTGACAAGCAGCCGTCCATGTCGAA...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTACCAGCTTGAGCAGCTaGCCAGCGGGTGCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQATSLSS*PAGATA Trigger: GGCAGTGGCACCCGCTGGCCAGCTGCTCAAGCTGGT...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGGCACTTCAGTCACATaGTCAGGCTCCACTTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFAGTSVT*SGSTSN Trigger: ATTAGAAGTGGAGCCTGACCATGTGACTGAAGTGCC...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGGGGCCCAGAGGCGTTaGGTACATCTGCAGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSGAQRR*VHLQCS Trigger: GGAGCACTGCAGATGTACTCAACGCCTCTGGGCCCC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATTTAGCAAAATGGCACTaGGTTTCTGGGATCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THAVSKMALSFWDRFPAHLAKWH*VSGIGS Trigger: GGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAA...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGGGTATTTCTTCCTTAGCTGTCGTCTTGCAGACACCATCGAAGCATAGAGGTGTGAAATCTACCTaGTATTTCCCCTCGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CLGISSLAVVLQTPSKHRGVKST*YFPSPP Trigger: CGGGGGCGAGGGGAAATATCAGGTAGATTTCACACC...TCTATGCTTCGATGGTGTCTGCAAGACGACAGCTAAGGAAGAAATACCCAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTCGGGTGCTTCCTCAGTaGTTTTCGCCAGCCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQARVLPQ*FSPAAR Trigger: GCGTGCGGCTGGCGAAAAGCACTGAGGAAGCACCCG...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCACCTGTGACTGGGGCCTaGACCAGCTTGAGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSPVTGA*TSLSSW Trigger: CCAGCTGCTCAAGCTGGTCCAGGCCCCAGTCACAGG...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATTATGGCACAGAGACGTaGAGTGAACACATGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: THAVSKMALSFWDRFPAHYGTET*SEHMLL Trigger: TAACAGCATGTGTTCACTTCACGTCTCTGTGCCATA...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCATGTGGTTTGAAGGCTTaGAGTCCCGATTTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFACGLKA*SPDFGI Trigger: TATTCCAAAATCGGGACTCCAAGCCTTCAAACCACA...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGATCGCACCACTGCCTaGGTGACAGAGCGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQADRTTA*VTERDS Trigger: GGAGTCTCGCTCTGTCACCCAGGCAGTGGTGCGATC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGGAGAGGGAGAGAGGTaGGGAATGGCCAGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSGEGER*GMASWW Trigger: CCACCAACTGGCCATTCCCCACCTCTCTCCCTCTCC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTCAGGCTGGAGTGCGGTaGTGCCATCTCGACTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAQAGVR*CHLDSL Trigger: CAGTGAGTCGAGATGGCACCACCGCACTCCAGCCTG...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAGGTGTGAAATCTACCTGATATTTCCCCTCGCCCCCGTCAGGTTACCGTTCAGGAATGGATTTTaGAGTTTCTGGGTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRRCEIYLIFPLAPVRLPFRNGF*SFWVLK Trigger: CTTCAGCACCCAGAAACTCCAAAATCCATTCCTGAA...CGGTAACCTGACGGGGGCGAGGGGAAATATCAGGTAGATTTCACACCTCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR TCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCATTCATGTTGATACTTTaGCCTCCTCCTGTTAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFAFMLIL*PPPVNH Trigger: GTGATTAACAGGAGGAGGTCAAAGTATCAACATGAA...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGGGTATTTCTTCCTTAGCTGTCGTCTTGCAGACACCATCGAAGCATAGAAAATCCAGTCCAGCGTaGGACGACTTACTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLGISSLAVVLQTPSKHRKSSPA*DDLLAS Trigger: TGAAGCCAGTAAGTCGTCGCACGCTGGACTGGATTT...TCTATGCTTCGATGGTGTCTGCAAGACGACAGCTAAGGAAGAAATACCCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATCGGTTCCCGGCCCATaGCAGTTTTGCAGAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSSVPGP*QFCRAH Trigger: GTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTTCACTCAGGCTGGAGTaGGGTGGTGCCATCTCGACT | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQASLRLE*GGAIST Trigger: AGTCGAGATGGCACCACCGCACTCCAGCCTGAGTGA...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGATTAAAACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGCGTGCGACGACTTACTaGCTTCATGGTAAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRLKRWQAATKPKIAKEVRATTY*LHGKEA Trigger: CGCCTCCTTACCATGAAGCCAGTAAGTCGTCGCACG...CACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTTTTAATCTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGCTGAGGACCCGCTGTaGTTTGAAGGCTTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSAEDPL*FEGLES Trigger: GGACTCCAAGCCTTCAAACCACAGCGGGTCCTCAGC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATCCCTCGTACGAGGATaGCATGGAGCTGACCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSSLVRG*HGADRS Trigger: GCTTCGGTCAGCTCCATGCCATCCTCGTACGAGGGA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGCGAGGAAGTTTGGCATaGCGGGCAGGAGCTGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQRGSLA*RAGAAG Trigger: CCCGGCAGCTCCTGCCCGCCATGCCAAACTTCCTCG...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGGCAGGAGAATCCCTTaGACCTGGGAGAAGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSGRRIP*TWEKEV Trigger: AACCTCCTTCTCCCAGGTTCAAGGGATTCTCCTGCC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCACTACCAAGTAGCTTTTaGTATGAAGTGAGAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: SKMALSFWDRFPAHASFALPSSF*YEVRNM Trigger: CATGTTTCTCACTTCATATCAAAAGCTACTTGGTAG...TGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTGAAATCTACCCCGGGACTTACCACTaGATAAATCCAGTCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NDGKQQLNQKSQRRCEIYPGTYH*INPVQR Trigger: ACGCTGGACTGGATTTATTCAGTGGTAAGTCCCGGG...GTAGATTTCACACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR TCA 90 bp | GGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTGAAATCTACCTGATAGGAGTTTCTGGGTGCTaGAGAAATAGGGCCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKQQLNQKSQRRCEIYLIGVSGC*RNRAFP Trigger: CGGAAAGGCCCTATTTCTTCAGCACCCAGAAACTCC...TATCAGGTAGATTTCACACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| CDS-3UTR GCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGGAGCTGGCGGGAGCTaGGGGCCTTACAGTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQGAGGS*GPYSNL Trigger: GAGGTTACTGTAAGGCCCGCAGCTCCCGCCAGCTCC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTATGGCACTGAGTTTCTaGGATCGGTTCCCGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAMALSF*DRFPAH Trigger: ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCAT...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGTAGAGCCCTGTGACTaGGGCCTGGACCAGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQVEPCD*GLDQLE Trigger: CTCAAGCTGGTCCAGGCCCCAGTCACAGGGCTCTAC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGCAGGGCTATGTGAGTaGCATCGGGTGCTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQAGLCE*HRVLPQ Trigger: CTGAGGAAGCACCCGATGTCACTCACATAGCCCTGC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTTGGACCTGGAACCACTaGATAAATCCAGTCCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAWTWNH*INPVQR Trigger: ACGCTGGACTGGATTTATTCAGTGGTTCCAGGTCCA...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGCAAATCAGCTGAGGTaGGGAGTTCAAGATCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSANQLR*GVQDQP Trigger: AGGCTGATCTTGAACTCCTCACCTCAGCTGATTTGC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGATTAAAACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGACAAAGTCGAATAAATaGGGTTCCAGTGGCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLKRWQAATKPKIAKEVTKSNK*GSSGGY Trigger: GTACCCGCCACTGGAACCCCATTTATTCGACTTTGT...CACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTTTTAATCTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| 3UTR CAA 72 bp | TCACATGGTCAGGCTCCACTTCTAATTCTAGTTCTTTaGCTATATCCACTACATCGAGTTCCTTCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SHGQAPLLILVL*LYPLHRVPSCT Trigger: GGTGCAGGAAGGAACTCGATGTAGTGGATATAGCAAAAGAACTAGAATTAGAAGTGGAGCCTGACCATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGAGAAGGAGGTTGCAGTaGGCCAAGATCGCACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQRRRLQ*AKIAPL Trigger: CAGTGGTGCGATCTTGGCTCACTGCAACCTCCTTCT...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGGAATGGCCAGTTGGTaGAACAGTCACAACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSGMASW*NSHNTQ Trigger: TTGTGTGTTGTGACTGTTCCACCAACTGGCCATTCC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCATCAAGCTTTATCATGTaGTGGAGGCACTTCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSSSFIM*WRHFSH Trigger: GTGACTGAAGTGCCTCCATCACATGATAAAGCTTGA...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | AAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGCTGTCATCCACGAGAGTTaGAATCAACTTCTTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KKPLCLLIQKEHLLIYQAVIHES*NQLLPN Trigger: GTTTGGAAGAAGTTGATTTCAACTCTCGTGGATGAC...AGCTTGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAAGAAACCACTTTGTTTaGTCATCCAAAAGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSRNHFV*SSKRST Trigger: GGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCT...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGAAACCACTTTGTTTGCTCATCCAAAAGGAGCACCTTCTCATCTATCAGAGCGAGACTCCATCTaGAAAAGTTTGAAATATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQETTLFAHPKGAPSHLSERDSI*KSLKYW Trigger: CCAATATTTCAAACTTTTTCAGATGGAGTCTCGCTC...TGATAGATGAGAAGGTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGTTCAAGCAATTCTCCTaGCTCAGCCTACCAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQFKQFS*LSLPSS Trigger: GCTACTTGGTAGGCTGAGGCAGGAGAATTGCTTGAA...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGATTAAAACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTGCTTAATTCAGGAATaGATTTTGGAGTTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLKRWQAATKPKIAKEVCLIQE*ILEFLG Trigger: ACCCAGAAACTCCAAAATCCATTCCTGAATTAAGCA...CACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTTTTAATCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| 3UTR CAA 72 bp | CAGAAGAGTTACAAATTTTCATTCGTCCCAAAGATTTaGTCTGGGTATTTCTTCCTTAGCTGTCGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKSYKFSFVPKI*SGYFFLSCRLA Trigger: TGCAAGACGACAGCTAAGGAAGAAATACCCAGACAAAATCTTTGGGACGAATGAAAATTTGTAACTCTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| CDS-3UTR TCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGGCTTTTGATATGAAGTaGGAAACATGCAGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQAFDMK*ETCSSF Trigger: GAAAGAGCTGCATGTTTCTCACTTCATATCAAAAGC...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGTATAACTTTCAAAATTaGAGTCAGGCCTTTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQYNFQN*SQAFQT Trigger: GGTTTGAAAGGCCTGACTCCAATTTTGAAAGTTATA...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| CDS CCA 90 bp | CACTCGCTTCGTGCAGCGCTGTCGCTGGCCTCTTCCGCCCGGAGTTaGGGGGCGGTATCACGTGATCGGGGGCCTTGCCCGCCCGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: HSLRAALSLASSARS*GAVSRDRGPCPPAI Trigger: TATGGCGGGCGGGCAAGGCCCCCGATCACGTGATACCGCCCCCCAACTCCGGGCGGAAGAGGCCAGCGACAGCGCTGCACGAAGCGAGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000450093.3 |
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| CDS GCA 90 bp | TTCATGGTAAGGAGGCGGCAGCAGTCCGCGGGAGCTGGCGGGAGCTaGGGGCCTTACAGTAACCTCCCAGGCGGTGGCTGCCAGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FMVRRRQQSAGAGGS*GPYSNLPGGGCQAP Trigger: TGGCGCCTGGCAGCCACCGCCTGGGAGGTTACTGTAAGGCCCGCAGCTCCCGCCAGCTCCCGCGGACTGCTGCCGCCTCCTTACCATGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000425533.1 ENST00000450093.3 ENST00000451672.2 ENST00000453396.5 ENST00000644531.1 |
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| CDS CCA 90 bp | CACTCGCTTCGTGCAGCGCTGTCGCTGGCCTCTTCCGCCCGGAGTTaGGGGGCGGTATCACGTGATCGGGGGCCTTGCCCGCCAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSLRAALSLASSARS*GAVSRDRGPCPPGS Trigger: TGAACCTGGCGGGCAAGGCCCCCGATCACGTGATACCGCCCCCCAACTCCGGGCGGAAGAGGCCAGCGACAGCGCTGCACGAAGCGAGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000453396.5 |
||
| CDS TCA 90 bp | AGTGAGTCGACACGGTGGGGGCCCGCGATCCCCGGGACTTACCACTaGATAAATCCAGTCCAGCGTGCGACGACTTACTGGCTTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SESTRWGPAIPGTYH*INPVQRATTYWLHG Trigger: ACCATGAAGCCAGTAAGTCGTCGCACGCTGGACTGGATTTATTCAGTGGTAAGTCCCGGGGATCGCGGGCCCCCACCGTGTCGACTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| CDS CCA 90 bp | TCCCCAGCCTGGAGGGGATCCCTCTCTGAAGACTTTATAGGATACTaGTTGGGCTCTGGTTTGGGATCCCGTTGGACTCCTGGTGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAWRGSLSEDFIGY*LGSGLGSRWTPGVA Trigger: AGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGAGAGGGATCCCCTCCAGGCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS CCA 90 bp | GAAGACTTTATAGGATACTGGTTGGGCTCTGGTTTGGGATCCCGTTaGACTCCTGGTGTTGCTTCCGGGAGGCGTACAACAGGAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EDFIGYWLGSGLGSR*TPGVASGRRTTGGE Trigger: CTCACCTCCTGTTGTACGCCTCCCGGAAGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS-3UTR CAA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATCGGCCCATGCCAGTTTaGCAGAGCACACCTGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: THAVSKMALSFWDRFPAHRPMPV*QSTPGV Trigger: TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCG...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTACTGTGGTTTGAAGGCTaGGAGTCCCGATTTTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVLWFEG*ESRFWN Trigger: ATTCCAAAATCGGGACTCCAAGCCTTCAAACCACAG...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| CDS-3UTR CAA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTAAAGAAACCACTTTGTTaGCTCATCCAAAAGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVKKPLC*LIQKEH Trigger: GTGCTCCTTTTGGATGAGCAAACAAAGTGGTTTCTT...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGGGATCGGTTCCCGGCCCATGCCAGTTTTGCAGAGCACACCTGGTGTATCTCAAGAAACCACTTaGTTTGCTCATCCAAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSGIGSRPMPVLQSTPGVSQETT*FAHPKG Trigger: TCCTTTTGGATGAGCAAACAAAGTGGTTTCTTGAGA...TACACCAGGTGTGCTCTGCAAAACTGGCATGGGCCGGGAACCGATCCCAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| CDS TCA 90 bp | ATTTCTTCCTTAGCTGTCGTCTTGCAGACACCATCGAAGCATAGATaGTGCAGCCCCAGGAGATTAAAACGATGGCAAGCAGCAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ISSLAVVLQTPSKHR*CSPRRLKRWQAATL Trigger: CAGTGTTGCTGCTTGCCATCGTTTTAATCTCCTGGGGCTGCATCATCTATGCTTCGATGGTGTCTGCAAGACGACAGCTAAGGAAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000450093.3 ENST00000453396.5 |
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| CDS CCA 90 bp | GTTGCCATTGCTAAGGTGGGAATTAAAGTAACAAAGTCGAATAAATaGGGTTCCAGTGGCGGGTACACCCAGCAGCCCTTACGTAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAIAKVGIKVTKSNK*GSSGGYTQQPLRKK Trigger: CTTCTTACGTAAGGGCTGCTGGGTGTACCCGCCACTGGAACCCCATTTATTCGACTTTGTTACTTTAATTCCCACCTTAGCAATGGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| CDS-3UTR CAA 90 bp | AGGAGATTAAAACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGCCCGTCAGGTTACCGTaGCCATTGCTAAGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRLKRWQAATKPKIAKEVPVRLP*PLLRWE Trigger: TTCCCACCTTAGCAATGGCAACGGTAACCTGACGGG...CACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTTTTAATCTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| CDS TCA 90 bp | ATTTCTTCCTTAGCTGTCGTCTTGCAGACACCATCGAAGCATAGATaGTGCAGCCCCAGGAGATTAAAACGATGGCAAGCAGCAAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISSLAVVLQTPSKHR*CSPRRLKRWQAASK Trigger: CTTACTTGCTGCTTGCCATCGTTTTAATCTCCTGGGGCTGCATCATCTATGCTTCGATGGTGTCTGCAAGACGACAGCTAAGGAAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635960.1 |
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| CDS-3UTR CAA 90 bp | ACACATGCTGTTAGCAAAATGGCACTGAGTTTCTGGGATCGGTTCCCGGCCCATGATTTTCCATTTTCTTaGCCTAGATCCATCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: THAVSKMALSFWDRFPAHDFPFS*PRSIRG Trigger: TCCTCTGATGGATCTAGGCAAAGAAAATGGAAAATC...ATGGGCCGGGAACCGATCCCAGAAACTCAGTGCCATTTTGCTAACAGCATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000451672.2 |
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| CDS-3UTR CAA 90 bp | AGGAGATTAAAACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTCCTTAGCTGTCGTCTaGCAGACACCATCGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRLKRWQAATKPKIAKEVSLAVV*QTPSKH Trigger: ATGCTTCGATGGTGTCTGCAAGACGACAGCTAAGGA...CACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTTTTAATCTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS-3UTR CAA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGAGGACCCGCTGTGGTTaGAAGGCTTGGAGTCCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQRTRCG*KAWSPD Trigger: ATCGGGACTCCAAGCCTTCAAACCACAGCGGGTCCT...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTGATAGCATAGCATTTTACCCACAGTATAACTTTCAAAATTGGAGTCAGAGGCAGGAGAATCCCTaGAACCTGGGAGAAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFDSIAFYPQYNFQNWSQRQENP*NLGEGG Trigger: ACCTCCTTCTCCCAGGTTCAAGGGATTCTCCTGCCT...CTGACTCCAATTTTGAAAGTTATACTGTGGGTAAAATGCTATGCTATCAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451672.2 |
||
| CDS-3UTR CAA 90 bp | AACGATGGCAAGCAGCAACTAAACCAAAAATCGCAAAGGAGGTGTGAAATCTACAGGTTACCGTTGCCATaGCTAAGGTGGGAATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NDGKQQLNQKSQRRCEIYRLPLP*LRWELK Trigger: CTTTAATTCCCACCTTAGCAATGGCAACGGTAACCT...GTAGATTTCACACCTCCTTTGCGATTTTTGGTTTAGTTGCTGCTTGCCATCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS CCA 72 bp | CGTGCAGCGCTGTCGCTGGCCTCTTCCGCCCGGAGTTaGGGGGCGGTATCACGTGATCGGGGGCCTTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RAALSLASSARS*GAVSRDRGPCP Trigger: CGGGCAAGGCCCCCGATCACGTGATACCGCCCCCCAACTCCGGGCGGAAGAGGCCAGCGACAGCGCTGCACG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000450093.3 ENST00000453396.5 |
||
| CDS TCA 72 bp | ACACGGTGGGGGCCCGCGATCCCCGGGACTTACCACTaGATAAATCCAGTCCAGCGTGCGACGACTTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: TRWGPAIPGTYH*INPVQRATTYW Trigger: CCAGTAAGTCGTCGCACGCTGGACTGGATTTATTCAGTGGTAAGTCCCGGGGATCGCGGGCCCCCACCGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644531.1 |
||
| CDS CAA 90 bp | CCAGCCTGGAGGGGATCCCTCTCTGAAGACTTTATAGGATACTGGTaGGGCTCTGGTTTGGGATCCCGTTGGACTCCTGGTGTTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAWRGSLSEDFIGYW*GSGLGSRWTPGVAS Trigger: GGAAGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGAGAGGGATCCCCTCCAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453396.5 |
||
| CDS TCA 72 bp | AGCTCTAGAATGTTTGGGGCGCTCACATTTGAGGCCTaGGGAGTAGAATCTGGCAACGGGCCGCTTAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRMFGALTFEA*GVESGNGPLRL Trigger: GAGCCTAAGCGGCCCGTTGCCAGATTCTACTCCTCAGGCCTCAAATGTGAGCGCCCCAAACATTCTAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453396.5 |
||
| CDS CCA 72 bp | ATAGGATACTGGTTGGGCTCTGGTTTGGGATCCCGTTaGACTCCTGGTGTTGCTTCCGGGAGGCGTACAACA | + |
|
Preference number: 6 (lower is better) Translates to: IGYWLGSGLGSR*TPGVASGRRTT Trigger: TGTTGTACGCCTCCCGGAAGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453396.5 |
||
| CDS CAA 72 bp | TATAGGATACTGGTTGGGCTCTGGTTTGGGATCCCGTaGGACTCCTGGTGTTGCTTCCGGGAGGCGTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: YRILVGLWFGIP*DSWCCFREAYN Trigger: GTTGTACGCCTCCCGGAAGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453396.5 |
||
| CDS CAA 90 bp | GGATCCCTCTCTGAAGACTTTATAGGATACTGGTTGGGCTCTGGTTaGGGATCCCGTTGGACTCCTGGTGTTGCTTCCGGGAGGCGTACA | + |
|
Preference number: 6 (lower is better) Translates to: GSLSEDFIGYWLGSG*GSRWTPGVASGRRT Trigger: TGTACGCCTCCCGGAAGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGAGAGGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453396.5 |
||
| CDS CAA 90 bp | GGGCCTTGCCCGCCCGCCATAATGTATCAGTCAAGCAACAAGTGTTaGTTGAGCGTGTCTGATGTTCTTGAACTGCCGCGCGTGAGATAC | + |
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Preference number: 6 (lower is better) Translates to: GPCPPAIMYQSSNKC*LSVSDVLELPRVRY Trigger: GTATCTCACGCGCGGCAGTTCAAGAACATCAGACACGCTCAACAAACACTTGTTGCTTGACTGATACATTATGGCGGGCGGGCAAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450093.3 |
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| CDS TCA 72 bp | GTCCTGTTTCTCCCCAGCCTGGAGGGGATCCCTCTCTaGAGACTTTATAGGATACTGGTTGGGCTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: VLFLPSLEGIPL*RLYRILVGLWF Trigger: AAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGAGAGGGATCCCCTCCAGGCTGGGGAGAAACAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS CCA 72 bp | TGGAGGGGATCCCTCTCTGAAGACTTTATAGGATACTaGTTGGGCTCTGGTTTGGGATCCCGTTGGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: WRGSLSEDFIGY*LGSGLGSRWTP Trigger: AGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGAGAGGGATCCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS CAA 72 bp | TCTGAAGACTTTATAGGATACTGGTTGGGCTCTGGTTaGGGATCCCGTTGGACTCCTGGTGTTGCTTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SEDFIGYWLGSG*GSRWTPGVASG Trigger: CCCGGAAGCAACACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS CAA 72 bp | AGGGGATCCCTCTCTGAAGACTTTATAGGATACTGGTaGGGCTCTGGTTTGGGATCCCGTTGGACTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RGSLSEDFIGYW*GSGLGSRWTPG Trigger: ACCAGGAGTCCAACGGGATCCCAAACCAGAGCCCAACCAGTATCCTATAAAGTCTTCAGAGAGGGATCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS TCA 72 bp | TCCTGGTGTTGCTTCCGGGAGGCGTACAACAGGAGGTaGGAGACTTCAAGTCCATCTAACAATTCCCCTATC | + |
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Preference number: 6 (lower is better) Translates to: SWCCFREAYNRR*ETSSPSNNSPI Trigger: GATAGGGGAATTGTTAGATGGACTTGAAGTCTCTCACCTCCTGTTGTACGCCTCCCGGAAGCAACACCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000453396.5 |
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| CDS CAA 72 bp | CCGCCCGCCATAATGTATCAGTCAAGCAACAAGTGTTaGTTGAGCGTGTCTGATGTTCTTGAACTGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: PPAIMYQSSNKC*LSVSDVLELPR Trigger: GCGCGGCAGTTCAAGAACATCAGACACGCTCAACAAACACTTGTTGCTTGACTGATACATTATGGCGGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450093.3 |
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| CDS CAA 72 bp | CCCGCCATAATGTATCAGTCAAGCAACAAGTGTTTGTaGAGCGTGTCTGATGTTCTTGAACTGCCGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: PAIMYQSSNKCL*SVSDVLELPRV Trigger: CACGCGCGGCAGTTCAAGAACATCAGACACGCTCAACAAACACTTGTTGCTTGACTGATACATTATGGCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450093.3 |
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| CDS CCA 72 bp | GCTAAGGTGGGAATTAAAGTAACAAAGTCGAATAAATaGGGTTCCAGTGGCGGGTACACCCAGCAGCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: AKVGIKVTKSNK*GSSGGYTQQPL Trigger: TAAGGGCTGCTGGGTGTACCCGCCACTGGAACCCCATTTATTCGACTTTGTTACTTTAATTCCCACCTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644531.1 |
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| CDS TCA 72 bp | GAAGATCGTATCCTCCAGGAAGAGGCGGAGTCGAGGTaGGGGAGTGAAATGCTTAATTCAGGAATGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: EDRILQEEAESR*GSEMLNSGMDF Trigger: AAAATCCATTCCTGAATTAAGCATTTCACTCCCTCACCTCGACTCCGCCTCTTCCTGGAGGATACGATCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635960.1 ENST00000644531.1 |
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