Pregenerated sensors for SMIM26 (Homo sapiens)
Ensembl gene IDs: ENSG00000232388Ensembl transcript IDs: ENST00000608034.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGGGCAGGAGGACTGCTTaGGTTGGGAGATGGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: HACNPNLTLWGPRQVDHLGRRTA*VGRWRL Trigger: TAACCTCCATCTCCCAACTCAAGCAGTCCTCCTGCC...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| 3UTR-3UTR CCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGATTAGCTGGGCGTGGTaGCATGGGCCTATAACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HACNPNLTLWGPRQVDHLISWAW*HGPITP Trigger: TGGGGTTATAGGCCCATGCCACCACGCCCAGCTAAT...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| 3UTR-3UTR GCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGATGAGGCAGGAGGACTaGTTGAGTTGGGAGATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HACNPNLTLWGPRQVDHLMRQED*LSWEME Trigger: CTCCATCTCCCAACTCAAGCAGTCCTCCTGCCTCAT...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| 3UTR-3UTR CCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGGAGGACTGCTTGAGTTaGGAGATGGAGGTTACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: HACNPNLTLWGPRQVDHLEDCLS*EMEVTV Trigger: CACTGTAACCTCCATCTCCCAACTCAAGCAGTCCTC...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| 3UTR-3UTR CAA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGAGGCAGGAGGACTGCTaGAGTTGGGAGATGGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HACNPNLTLWGPRQVDHLRQEDC*SWEMEV Trigger: AACCTCCATCTCCCAACTCAAGCAGTCCTCCTGCCT...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR GCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGGCAGTGGCCTGCGCCTaGAATCCCAGCTACTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLAVACA*NPSYSG Trigger: TCCCGAGTAGCTGGGATTGCAGGCGCAGGCCACTGC...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR TCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGCGACAGGGTGAGACCTaGCGACTTCGCCATTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLRQGET*RLRHCP Trigger: CGGACAATGGCGAAGTCGTCAGGTCTCACCCTGTCG...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR GCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGCCAACACAGACCAGGTaGCGATCCCGTAGACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLPTQTR*RSRRPP Trigger: CGGTGGTCTACGGGATCGGCACCTGGTCTGTGTTGG...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR GCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGCCGAGATCATGCCACTaGACTCAAGCCTGGGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLPRSCH*TQAWAT Trigger: TGTCGCCCAGGCTTGAGTGCAGTGGCATGATCTCGG...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR GCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGGGTGAGCCGAGATCATaGCACTGCACTCAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLGEPRS*HCTQAW Trigger: CCAGGCTTGAGTGCAGTGGCATGATCTCGGCTCACC...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR TCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGGCTATAGTAAAGCAGTaGGCCCAACACAGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLAIVKQ*AQHRPG Trigger: ACCTGGTCTGTGTTGGGCTCACTGCTTTACTATAGC...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR CCA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGACTCATTTCGATACATaGGTACGCCAGCGAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HACNPNLTLWGPRQVDHLTHFDT*VRQRVP Trigger: AGGCACTCGCTGGCGTACCCATGTATCGAAATGAGT...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR CAA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGAGGCAGGAGAATCACTaGAGCCCGGAGACGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: HACNPNLTLWGPRQVDHLRQENH*SPETQV Trigger: AACCTGCGTCTCCGGGCTCAAGTGATTCTCCTGCCT...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||
| CDS-3UTR CAA 90 bp | CACGCCTGTAATCCCAATCTCACTTTGTGGGGGCCGAGGCAGGTGGACCACCTGCTGACGACTTCGCCATaGTCCGGCTATAGTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HACNPNLTLWGPRQVDHLLTTSP*SGYSKA Trigger: TGCTTTACTATAGCCGGACAATGGCGAAGTCGTCAG...CAGGTGGTCCACCTGCCTCGGCCCCCACAAAGTGAGATTGGGATTACAGGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000608034.1 |
||