RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SMIM24 (Homo sapiens)

Ensembl gene IDs: ENSG00000095932

Ensembl transcript IDs: ENST00000215531.6, ENST00000586804.1, ENST00000587847.1, ENST00000591708.1

Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAAGAGGGGTGCATaGAAACCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGG +
Preference number: 1 (lower is better)
Translates to: KKNHQAGTKLRKRGA*KPCLPREPPMREVG
Trigger: CCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR CCA 90 bp GGAGCCCTTCCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATTaGGAAGCAGCTCTCAGCTGGCAGTGGGTGCATGGGAGAGGGGAA +
Preference number: 1 (lower is better)
Translates to: GALPKGCYECFNAGH*EAALSWQWVHGRGE
Trigger: TTCCCCTCTCCCATGCACCCACTGCCAGCTGAGAGCTGCTTCCCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAAGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR GCA 90 bp AGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGGGATaGTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCA +
Preference number: 1 (lower is better)
Translates to: SHEIVEDCGCLLNQG*SPSIRRITRQGPSS
Trigger: TGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR GCA 90 bp GAGTCCCAAGAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATaGTTTAATGCAGGCCATTGGGAAGCAGCTCTCAGCTGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: ESQEMTGALPKGCYE*FNAGHWEAALSWQW
Trigger: CCACTGCCAGCTGAGAGCTGCTTCCCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTCTTGGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR-3UTR GCA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTGCATCTCTGGGGGACTaGCTGGAAGAGGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: PCLPREPPMREVGWVPSLASLGD*LEEAAR
Trigger: CCTGGCTGCCTCTTCCAGGCAGTCCCCCAGAGATGC...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR GCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAGCATCTCTGGGGGACTaGCTGGAAGAGGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSASLGD*LEEAAR
Trigger: CCTGGCTGCCTCTTCCAGGCAGTCCCCCAGAGATGC...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CCA 90 bp GGCGTCTGGGCACCTGTGCACCCTGAGCCTCCATATCATCCGCCCAGCCATCGCAAAGAAATCAGGCAGTaGGGAGAAGCAGGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: GVWAPVHPEPPYHPPSHRKEIRQ*GEAGGA
Trigger: GGCTCCACCTGCTTCTCCCCACTGCCTGATTTCTTT...GCGATGGCTGGGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR-3UTR GCA 90 bp CGGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGCATCTCTGGGGGACTaGCTGGAAGAGGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: RVSPQPGMLSEYKKNHQAASLGD*LEEAAR
Trigger: CCTGGCTGCCTCTTCCAGGCAGTCCCCCAGAGATGC...TGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CCA 90 bp AGCAAAGATTTGCTTGGAGACGGCGCTCAGGGCTCAAAGTCCAGGGCTCAGGACATGAGGGAGGTGGGGTaGGTTCCAAGCCTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: SKDLLGDGAQGSKSRAQDMREVG*VPSLLH
Trigger: GTGAAGAAGGCTTGGAACCCACCCCACCTCCCTCAT...GTCCTGAGCCCTGGACTTTGAGCCCTGAGCGCCGTCTCCAAGCAAATCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR-3UTR CCA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCATGAGGGAGGTGGGGTaGGTTCCAAGCCTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: GPSSGRGVHENHVCPESPMREVG*VPSLLH
Trigger: GTGAAGAAGGCTTGGAACCCACCCCACCTCCCTCAT...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR TCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAAGGAAGAGGGGTGCATaGAAACCATGTTTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSRKRGA*KPCLPR
Trigger: TCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCT...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCCAGAAGAGGCATCTCTaGGGGACTGCCTGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSQKRHL*GTAWKR
Trigger: CCTCTTCCAGGCAGTCCCCCAGAGATGCCTCTTCTG...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR TCA 90 bp CAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAAGAGGGGTGCATaGAAACCATGTTTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: QPGMLSEYKKNHQAGTKLRKRGA*KPCLPR
Trigger: TCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCT...GAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CCA 90 bp TTCCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATTGGGAAGCAGCTCTCACAGAAGAGGCATCTCTaGGGGACTGCCTGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: FQRAVTNALMQAIGKQLSQKRHL*GTAWKR
Trigger: CCTCTTCCAGGCAGTCCCCCAGAGATGCCTCTTCTG...TGAGAGCTGCTTCCCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR-3UTR CCA 90 bp AGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGATTCTGAATCCCAGATaGAGTCATTTCACGGGCTTC +
Preference number: 2 (lower is better)
Translates to: RSRWSHEIVEDCGCLLNQILNPR*SHFTGF
Trigger: GAAGCCCGTGAAATGACTCCATCTGGGATTCAGAAT...CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CCA 90 bp GACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCATTCTGAATCCCAGATaGAGTCATTTCACGGGCTTC +
Preference number: 2 (lower is better)
Translates to: DQAQEEGCMKTMFAQRAPILNPR*SHFTGF
Trigger: GAAGCCCGTGAAATGACTCCATCTGGGATTCAGAAT...GGGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAATTCTGAATCCCAGATaGAGTCATTTCACGGGCTTC +
Preference number: 2 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGILNPR*SHFTGF
Trigger: GAAGCCCGTGAAATGACTCCATCTGGGATTCAGAAT...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR CCA 72 bp CCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATTaGGAAGCAGCTCTCAGCTGGCAGTGGGTGCATGGG +
Preference number: 3 (lower is better)
Translates to: PKGCYECFNAGH*EAALSWQWVHG
Trigger: CCCATGCACCCACTGCCAGCTGAGAGCTGCTTCCCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR CCA 72 bp TGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTaGGTTCCAAGCCTTCTTCACTTGAGAACACTGTAT +
Preference number: 3 (lower is better)
Translates to: CLPREPPMREVG*VPSLLHLRTLY
Trigger: ATACAGTGTTCTCAAGTGAAGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR GCA 72 bp GAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATaGTTTAATGCAGGCCATTGGGAAGCAGCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: EMTGALPKGCYE*FNAGHWEAALS
Trigger: GCTGAGAGCTGCTTCCCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR-3UTR CAA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCCAAGCCTTCTTCACTaGAGAACACTGTATTCTGAA +
Preference number: 3 (lower is better)
Translates to: GPSSGRGVHENHVCPESPPSLLH*RTLYSE
Trigger: TTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGG...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CAA 90 bp GTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGCCAAGCCTTCTTCACTaGAGAACACTGTATTCTGAA +
Preference number: 3 (lower is better)
Translates to: VSPQPGMLSEYKKNHQAGPSLLH*RTLYSE
Trigger: TTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGG...CCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
3UTR-3UTR CAA 90 bp TTCCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATTGGGAAGCAGCTCTCACCAAGCCTTCTTCACTaGAGAACACTGTATTCTGAA +
Preference number: 3 (lower is better)
Translates to: FQRAVTNALMQAIGKQLSPSLLH*RTLYSE
Trigger: TTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGG...TGAGAGCTGCTTCCCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
3UTR TCA 72 bp GGTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTaGATCCCAGATGGAGTCATTTCACGGGCTTCAAGT +
Preference number: 3 (lower is better)
Translates to: GSKPSSLENTVF*IPDGVISRASS
Trigger: ACTTGAAGCCCGTGAAATGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR TCA 90 bp GCTCAGGGCGTCTGGGCACCTGTGCACCCTGAGCCTCCATATCATCCGCCCAGCGGCACCTGTGCACCCTaGGCCTCCATATCATCCGCC +
Preference number: 4 (lower is better)
Translates to: AQGVWAPVHPEPPYHPPSGTCAP*ASISSA
Trigger: GGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCC...GCTGGGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGCCCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp GCTCAGGGCGTCTGGGCACCTGTGCACCCTGAGCCTCCATATCATCCGCCCAGCGCATCTCTGGGGGACTaGCTGGAAGAGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AQGVWAPVHPEPPYHPPSASLGD*LEEAAR
Trigger: CCTGGCTGCCTCTTCCAGGCAGTCCCCCAGAGATGC...GCTGGGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGCCCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR TCA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCCCCCAGGGTCTCCATaGCGGTCGAGTGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PCLPREPPMREVGWVPSLPPGSP*RSSEPA
Trigger: TGCTGGCTCACTCGACCGTCATGGAGACCCTGGGGG...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp AGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGTGCTCCGTGGCCTGCTaGGCCTCCACCGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSRWSHEIVEDCGCLLNQCSVAC*ASTGER
Trigger: CCTCTCCCCGGTGGAGGCCCAGCAGGCCACGGAGCA...CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR TCA 90 bp GGCGTCTGGGCACCTGTGCACCCTGAGCCTCCATATCATCCGCCCAGCCATCGCAGGAAGAGGGGTGCATaGAAACCATGTTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVWAPVHPEPPYHPPSHRRKRGA*KPCLPR
Trigger: TCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCT...GCGATGGCTGGGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCCACGGCTTCAGGCGATaGTCCGTGGCCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSHGFRR*SVACWA
Trigger: GGCCCAGCAGGCCACGGAGCATCGCCTGAAGCCGTG...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAGCGTCTGGGCACCTGTaGACCCTGAGCCTCCATATC +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSASGHL*TLSLHI
Trigger: GATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGC...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTGCGATGCTCCGTGGCTaGAGGAAGTTGGGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSAMLRG*RKLGRF
Trigger: GAACCTCCCCAACTTCCTGCAGCCACGGAGCATCGC...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR CCA 90 bp GCTCAGGGCGTCTGGGCACCTGTGCACCCTGAGCCTCCATATCATCCGCCCAGCTTTAATGCAGGCCATTaGGAAGCAGCTCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AQGVWAPVHPEPPYHPPSFNAGH*EAALSW
Trigger: CCAGCTGAGAGCTGCTTCCCAATGGCCTGCATTAAA...GCTGGGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGCCCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR TCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTAAGCAGGTGGAGCCATaGGATCGTGGAGGATTGCGG +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSKQVEP*DRGGLR
Trigger: CCGCAATCCTCCACGATCTCATGGCTCCACCTGCTT...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTGAAGGTCACTGGGGGTaGTCCGACAGAGGGGGTATT +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSEGHWG*SDRGGI
Trigger: AATACCCCCTCTGTCGGAGCACCCCCAGTGACCTTC...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR CCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAGGAGCCATGAGATCGTaGAGGATTGCGGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSGAMRS*RIAGVS
Trigger: GGAGACACCCGCAATCCTCCACGATCTCATGGCTCC...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGGGTGGGGAGAAGCAGGTaGAGCCATGAGATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: EAGGAMRSWRIAGVSSTRVGRSR*SHEIVE
Trigger: CTCCACGATCTCATGGCTCCACCTGCTTCTCCCCAC...CCTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAGAAGCAGCTCTCAGCTaGCAGTGGGTGCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSEAALS*QWVHGR
Trigger: TCTCCCATGCACCCACTGCCAGCTGAGAGCTGCTTC...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS-3UTR TCA 90 bp AGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGAAGCAGGTGGAGCCATaGGATCGTGGAGGATTGCGG +
Preference number: 4 (lower is better)
Translates to: RSRWSHEIVEDCGCLLNQKQVEP*DRGGLR
Trigger: CCGCAATCCTCCACGATCTCATGGCTCCACCTGCTT...CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR TCA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTTCCCCAGAGGTAAACTaGGTCCCAAGAGATGACAGG +
Preference number: 4 (lower is better)
Translates to: PCLPREPPMREVGWVPSLSPEVN*VPRDDR
Trigger: CCTGTCATCTCTTGGGACTCAGTTTACCTCTGGGGA...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAGAGATCGTGGAGGATTaGGGGTGTCTCCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSEIVED*GCLLNQ
Trigger: CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTC...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGCCTCGTCCTCAGCCCTaGCCTTGGAACACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCLLNQGCSPSIRRITRQPRPQP*PWNTRG
Trigger: GCCTCTGGTGTTCCAAGGCCAGGGCTGAGGACGAGG...CTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS-3UTR CCA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCAGAAGAGGCATCTCTaGGGGACTGCCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GPSSGRGVHENHVCPESPQKRHL*GTAWKR
Trigger: CCTCTTCCAGGCAGTCCCCCAGAGATGCCTCTTCTG...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCCAGAAGAGGCATCTCTaGGGGACTGCCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: DQAQEEGCMKTMFAQRAPQKRHL*GTAWKR
Trigger: CCTCTTCCAGGCAGTCCCCCAGAGATGCCTCTTCTG...GGGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGGATGAGGGAGGTGGGGTaGGTTCCAAGCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: EAGGAMRSWRIAGVSSTRMREVG*VPSLLH
Trigger: GTGAAGAAGGCTTGGAACCCACCCCACCTCCCTCAT...CCTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp AGCAAAGATTTGCTTGGAGACGGCGCTCAGGGCTCAAAGTCCAGGGCTCAGGACGTGGGGAGAAGCAGGTaGAGCCATGAGATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SKDLLGDGAQGSKSRAQDVGRSR*SHEIVE
Trigger: CTCCACGATCTCATGGCTCCACCTGCTTCTCCCCAC...GTCCTGAGCCCTGGACTTTGAGCCCTGAGCGCCGTCTCCAAGCAAATCTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCACTGGCAGTGGGTGCATaGGAGAGGGGAAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSLAVGA*ERGSSV
Trigger: AACAGAACTTCCCCTCTCCCATGCACCCACTGCCAG...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS-3UTR GCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTCATGACTGTGCTCTTTaGTCTCTCATGGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSHDCAL*SLMVSG
Trigger: CCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATG...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp AGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGGAGATCGTGGAGGATTaGGGGTGTCTCCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: RSRWSHEIVEDCGCLLNQEIVED*GCLLNQ
Trigger: CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTC...CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCCACGGCTTCAGGCGATaGTCCGTGGCTGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSHGFRR*SVAAGS
Trigger: ACTTCCTGCAGCCACGGAGCATCGCCTGAAGCCGTG...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR CCA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTCTTTGCTCTCTCATaGTCTCCGGGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PCLPREPPMREVGWVPSLLFALS*SPGSFS
Trigger: GGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAG...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAAAAGAAATCAGGCAGTaGGGAGAAGCAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSKEIRQ*GEAGGA
Trigger: GGCTCCACCTGCTTCTCCCCACTGCCTGATTTCTTT...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp AGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGGAGCAAAGATTTGCTTaGAGACGGCGCTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RSRWSHEIVEDCGCLLNQEQRFA*RRRSGL
Trigger: GAGCCCTGAGCGCCGTCTCCAAGCAAATCTTTGCTC...CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp CAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCTCAGGCGATGCTCCGTaGCTGCAGGAAGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QPGMLSEYKKNHQAGTKLSGDAP*LQEVGE
Trigger: CTCCCCAACTTCCTGCAGCCACGGAGCATCGCCTGA...GAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR CCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCGAGAGAGAAGGTCACTaGGGGTGCTCCGACAGAGGG +
Preference number: 4 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSEREGH*GCSDRG
Trigger: CCCTCTGTCGGAGCACCCCCAGTGACCTTCTCTCTC...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR TCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCAAGCAGGTGGAGCCATaGGATCGTGGAGGATTGCGG +
Preference number: 4 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSKQVEP*DRGGLR
Trigger: CCGCAATCCTCCACGATCTCATGGCTCCACCTGCTT...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAGCTCAGGAAGAGGGGTaGATGAAAACCATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSAQEEG*MKTMFA
Trigger: GGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGC...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATCCTCAGCCCTGGCCTTaGAACACCAGAGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: EMTGALPKGCYECFNAGHPQPWP*NTRGGW
Trigger: CCAACCGCCTCTGGTGTTCCAAGGCCAGGGCTGAGG...ATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp GAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATCCTCGTCCTCAGCCCTaGCCTTGGAACACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EMTGALPKGCYECFNAGHPRPQP*PWNTRG
Trigger: GCCTCTGGTGTTCCAAGGCCAGGGCTGAGGACGAGG...ATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTCTCTTTGCTCTCTCATaGTCTCCGGGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSLFALS*SPGSFS
Trigger: GGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAG...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGACAGAAGAGGCATCTCTaGGGGACTGCCTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGQKRHL*GTAWKR
Trigger: CCTCTTCCAGGCAGTCCCCCAGAGATGCCTCTTCTG...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCGGAGCCATGAGATCGTaGAGGATTGCGGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSGAMRS*RIAGVS
Trigger: GGAGACACCCGCAATCCTCCACGATCTCATGGCTCC...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCAAAGAAATCAGGCAGTaGGGAGAAGCAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DQAQEEGCMKTMFAQRAPKEIRQ*GEAGGA
Trigger: GGCTCCACCTGCTTCTCCCCACTGCCTGATTTCTTT...GGGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAGAAGCAGCTCTCAGCTaGCAGTGGGTGCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGEAALS*QWVHGR
Trigger: TCTCCCATGCACCCACTGCCAGCTGAGAGCTGCTTC...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS-3UTR CCA 90 bp GAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATGCTTTAATGCAGGCCATTCTGCTCAGGGCGTCTaGGCACCTGTGCACCCTGAG +
Preference number: 4 (lower is better)
Translates to: EMTGALPKGCYECFNAGHSAQGV*APVHPE
Trigger: CTCAGGGTGCACAGGTGCCCAGACGCCCTGAGCAGA...ATGGCCTGCATTAAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR TCA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCAGACCAAATAGACGATaGACAGGAAGCCGACTACCG +
Preference number: 4 (lower is better)
Translates to: GPSSGRGVHENHVCPESPRPNRR*TGSRLP
Trigger: CGGTAGTCGGCTTCCTGTTCATCGTCTATTTGGTCT...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS-3UTR TCA 90 bp GACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCAGACCAAATAGACGATaGACAGGAAGCCGACTACCG +
Preference number: 4 (lower is better)
Translates to: DQAQEEGCMKTMFAQRAPRPNRR*TGSRLP
Trigger: CGGTAGTCGGCTTCCTGTTCATCGTCTATTTGGTCT...GGGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS-3UTR TCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAGGTTGGACTCCATTCTaGACGTGGTCTCCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGGWTPF*TWSPPR
Trigger: ACGAGGAGGAGACCACGTTCAGAATGGAGTCCAACC...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTCTCCTCAACCAGGGATaGTCTCCGAGTATAAGAAGA +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSLLNQG*SPSIRR
Trigger: TCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAG...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp GGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGAGATCGTGGAGGATTaGGGGTGTCTCCTCAACCAG +
Preference number: 4 (lower is better)
Translates to: GCLLNQGCSPSIRRITRQEIVED*GCLLNQ
Trigger: CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTC...CTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTAAGGGCTGTTACGAATaGTTTAATGCAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PCLPREPPMREVGWVPSLKGCYE*FNAGHW
Trigger: CCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTT...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS-3UTR CCA 90 bp GTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTCATCAGGCGATGCTCCGTaGCCTGCTGGGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: VPSLLHLRTLYSESQMESSGDAP*PAGPPP
Trigger: CGGTGGAGGCCCAGCAGGCCACGGAGCATCGCCTGA...TGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCAACACCAGAGGCGGTTaGCCAGCAAGACCAAATAGA +
Preference number: 4 (lower is better)
Translates to: GPSSGRGVHENHVCPESPNTRGG*PARPNR
Trigger: TCTATTTGGTCTTGCTGGCCAACCGCCTCTGGTGTT...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS-3UTR CCA 90 bp GAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGGCTCTTGTCTTCACTCTaGTCCTGGTATAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: EAGGAMRSWRIAGVSSTRLLSSL*SWYRLD
Trigger: GTCCAACCTATACCAGGACCAGAGTGAAGACAAGAG...CCTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTATTCTGAATCCCAGATaGAGTCATTTCACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PCLPREPPMREVGWVPSLILNPR*SHFTGF
Trigger: GAAGCCCGTGAAATGACTCCATCTGGGATTCAGAAT...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAATGAGGGAGGTGGGGTaGGTTCCAAGCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGMREVG*VPSLLH
Trigger: GTGAAGAAGGCTTGGAACCCACCCCACCTCCCTCAT...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp AGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCAACCAGTTTAATGCAGGCCATTaGGAAGCAGCTCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSRWSHEIVEDCGCLLNQFNAGH*EAALSW
Trigger: CCAGCTGAGAGCTGCTTCCCAATGGCCTGCATTAAA...CTGGTTGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS-3UTR CCA 90 bp CGGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCACGACAGAGGGGGTATTaGAAAGGGACGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RVSPQPGMLSEYKKNHQARQRGY*KGTELQ
Trigger: CTGAAGCTCCGTCCCTTTCCAATACCCCCTCTGTCG...TGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR TCA 90 bp GTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTCATCCATGACGGTCGAGTaGGCCAGCAGCCAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VPSLLHLRTLYSESQMESSMTVE*ASSQPA
Trigger: CGCTGGCTGGCTGCTGGCTCACTCGACCGTCATGGA...TGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp CTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCCATGACTGTGCTCTTTaGTCTCTCATGGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LNQGCSPSIRRITRQGPSHDCAL*SLMVSG
Trigger: CCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATG...GCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp ACTGAGTCCCAAGAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATGCTTTGGGGAGTGTTTAATCTaGTCAGGGCGTCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: TESQEMTGALPKGCYECFGECLI*SGRLGT
Trigger: GGTGCCCAGACGCCCTGAGCAGATTAAACACTCCCC...AAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTCTTGGGACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp GGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGAAGGAGCAAAGATTTaGTTGGAGACGGCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GCLLNQGCSPSIRRITRQEGAKI*LETALR
Trigger: CCTGAGCGCCGTCTCCAAGCAAATCTTTGCTCCTTC...CTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCTCTTGTCTTCACTCTaGTCCTGGTATAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GPSSGRGVHENHVCPESPLLSSL*SWYRLD
Trigger: GTCCAACCTATACCAGGACCAGAGTGAAGACAAGAG...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTATTCTGAATCCCAGATaGAGTCATTTCACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSILNPR*SHFTGF
Trigger: GAAGCCCGTGAAATGACTCCATCTGGGATTCAGAAT...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGAAAAGAAATCAGGCAGTaGGGAGAAGCAGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGKEIRQ*GEAGGA
Trigger: GGCTCCACCTGCTTCTCCCCACTGCCTGATTTCTTT...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR TCA 90 bp CGGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAAGGAAGAGGGGTGCATaGAAACCATGTTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RVSPQPGMLSEYKKNHQARKRGA*KPCLPR
Trigger: TCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCT...TGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp GTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGGCTCAGGAAGAGGGGTaGATGAAAACCATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: VSPQPGMLSEYKKNHQAGAQEEG*MKTMFA
Trigger: GGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGC...CCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp CGGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGCTCAGGAAGAGGGGTaGATGAAAACCATGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RVSPQPGMLSEYKKNHQAAQEEG*MKTMFA
Trigger: GGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGC...TGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp TGGGTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGCCCTTTCCAAGATATTaGAGGGCCCTGGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: WVPSLLHLRTLYSESQMEPFPRY*RALGHP
Trigger: GGGGTGCCCCAGGGCCCTGCAATATCTTGGAAAGGG...CTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CCA 90 bp CGGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAAACACCAGAGGCGGTTaGCCAGCAAGACCAAATAGA +
Preference number: 4 (lower is better)
Translates to: RVSPQPGMLSEYKKNHQANTRGG*PARPNR
Trigger: TCTATTTGGTCTTGCTGGCCAACCGCCTCTGGTGTT...TGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS-3UTR CCA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGACTCTTTGCTCTCTCATaGTCTCCGGGCTCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGLFALS*SPGSFS
Trigger: GGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAG...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR GCA 90 bp ACTGAGTCCCAAGAGATGACAGGAGCCCTTCCAAAGGGCTGTTACGAATGCTTTCATGACTGTGCTCTTTaGTCTCTCATGGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TESQEMTGALPKGCYECFHDCAL*SLMVSG
Trigger: CCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATG...AAAGCATTCGTAACAGCCCTTTGGAAGGGCTCCTGTCATCTCTTGGGACTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR GCA 90 bp CAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCCTCCTCAACCAGGGATaGTCTCCGAGTATAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QPGMLSEYKKNHQAGTKLLLNQG*SPSIRR
Trigger: TCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAG...GAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGCTCTTGTCTTCACTCTaGTCCTGGTATAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: GCLLNQGCSPSIRRITRQLLSSL*SWYRLD
Trigger: GTCCAACCTATACCAGGACCAGAGTGAAGACAAGAG...CTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp TGGGTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGGTGGCTGCAGGAAGTTaGGGAGGTTCGACTCAGAGG +
Preference number: 4 (lower is better)
Translates to: WVPSLLHLRTLYSESQMEVAAGS*GGSTQR
Trigger: CCTCTGAGTCGAACCTCCCCAACTTCCTGCAGCCAC...CTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR CCA 90 bp CAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCATTCTGAATCCCAGATaGAGTCATTTCACGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QPGMLSEYKKNHQAGTKLILNPR*SHFTGF
Trigger: GAAGCCCGTGAAATGACTCCATCTGGGATTCAGAAT...GAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTCAGGAGCCATGAGATCGTaGAGGATTGCGGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VPSLLHLRTLYSESQMESGAMRS*RIAGVS
Trigger: GGAGACACCCGCAATCCTCCACGATCTCATGGCTCC...TGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTCAGTGGGGAGAAGCAGGTaGAGCCATGAGATCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VPSLLHLRTLYSESQMESVGRSR*SHEIVE
Trigger: CTCCACGATCTCATGGCTCCACCTGCTTCTCCCCAC...TGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CCA 90 bp GTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTCACTGGCAGTGGGTGCATaGGAGAGGGGAAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: VPSLLHLRTLYSESQMESLAVGA*ERGSSV
Trigger: AACAGAACTTCCCCTCTCCCATGCACCCACTGCCAG...TGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS-3UTR GCA 90 bp GTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTCAAAGGGCTGTTACGAATaGTTTAATGCAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: VPSLLHLRTLYSESQMESKGCYE*FNAGHW
Trigger: CCAATGGCCTGCATTAAAGCATTCGTAACAGCCCTT...TGACTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000591708.1
CDS GCA 90 bp AAGCCGACTACCGCAGCCAGGCCCACCAGCCACGGCTTCAGGCGATaGTCCGTGGCTGCAGGAAGTTGGGGAGGTTCGACTCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KPTTAARPTSHGFRR*SVAAGSWGGSTQRK
Trigger: CTTCCTCTGAGTCGAACCTCCCCAACTTCCTGCAGCCACGGAGCATCGCCTGAAGCCGTGGCTGGTGGGCCTGGCTGCGGTAGTCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586804.1
ENST00000587847.1
CDS-3UTR CAA 90 bp CCATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTTCCTCAGCCCTGGCCTaGGAACACCAGAGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PCLPREPPMREVGWVPSLSSALA*EHQRRL
Trigger: CAACCGCCTCTGGTGTTCCAAGGCCAGGGCTGAGGA...AAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS TCA 90 bp CCTTGGAACACCAGAGGCGGTTGGCCAGCAAGACCAAATAGACGATaGACAGGAAGCCGACTACCGCAGCCAGGCCCACCAGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: PWNTRGGWPARPNRR*TGSRLPQPGPPATA
Trigger: AGCCGTGGCTGGTGGGCCTGGCTGCGGTAGTCGGCTTCCTGTTCATCGTCTATTTGGTCTTGCTGGCCAACCGCCTCTGGTGTTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000586804.1
ENST00000587847.1
CDS-3UTR CAA 90 bp TGGGGAGAAGCAGGTGGAGCCATGAGATCGTGGAGGATTGCGGGTGTCTCCTCATCCTCAGCCCTGGCCTaGGAACACCAGAGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: WGEAGGAMRSWRIAGVSSSSALA*EHQRRL
Trigger: CAACCGCCTCTGGTGTTCCAAGGCCAGGGCTGAGGA...TGAGGAGACACCCGCAATCCTCCACGATCTCATGGCTCCACCTGCTTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS CCA 90 bp CCCACCAGCCACGGCTTCAGGCGATGCTCCGTGGCTGCAGGAAGTTaGGGAGGTTCGACTCAGAGGAAGAAAAGGTCAGAAGACCCCCTT +
Preference number: 5 (lower is better)
Translates to: PTSHGFRRCSVAAGS*GGSTQRKKRSEDPL
Trigger: AAGGGGGTCTTCTGACCTTTTCTTCCTCTGAGTCGAACCTCCCCAACTTCCTGCAGCCACGGAGCATCGCCTGAAGCCGTGGCTGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586804.1
ENST00000587847.1
CDS-3UTR CAA 90 bp GCTCAGGGCGTCTGGGCACCTGTGCACCCTGAGCCTCCATATCATCCGCCCAGCTGGTCCTGGTATAGGTaGGACTCCATTCTGAACGTG +
Preference number: 5 (lower is better)
Translates to: AQGVWAPVHPEPPYHPPSWSWYR*DSILNV
Trigger: CACGTTCAGAATGGAGTCCAACCTATACCAGGACCA...GCTGGGCGGATGATATGGAGGCTCAGGGTGCACAGGTGCCCAGACGCCCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CAA 90 bp AGCAAAGATTTGCTTGGAGACGGCGCTCAGGGCTCAAAGTCCAGGGCTCAGGACTCCCTTTCCAAGATATaGCAGGGCCCTGGGGCACCC +
Preference number: 5 (lower is better)
Translates to: SKDLLGDGAQGSKSRAQDSLSKI*QGPGAP
Trigger: GGGTGCCCCAGGGCCCTGCAATATCTTGGAAAGGGA...GTCCTGAGCCCTGGACTTTGAGCCCTGAGCGCCGTCTCCAAGCAAATCTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS-3UTR CAA 90 bp GGACCAAGCTCAGGAAGAGGGGTGCATGAAAACCATGTTTGCCCAGAGAGCCCCCGTGGCTGCAGGAAGTaGGGGAGGTTCGACTCAGAG +
Preference number: 5 (lower is better)
Translates to: GPSSGRGVHENHVCPESPRGCRK*GRFDSE
Trigger: CTCTGAGTCGAACCTCCCCAACTTCCTGCAGCCACG...GGGGCTCTCTGGGCAAACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS-3UTR CAA 90 bp GTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGCCGACAGAGGGGGTATaGGAAAGGGACGGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: VSPQPGMLSEYKKNHQAGPTEGV*ERDGAS
Trigger: TGAAGCTCCGTCCCTTTCCAATACCCCCTCTGTCGG...CCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS GCA 90 bp CTGCCTGGAAGAGGCAGCCAGGAATCTTCACATGACTGTGCTCTTTaGTCTCTCATGGTCTCCGGGCTCTTTTTCCTCCAGATCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LPGRGSQESSHDCAL*SLMVSGLFFLQIQS
Trigger: GGACTGGATCTGGAGGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATGTGAAGATTCCTGGCTGCCTCTTCCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS CCA 90 bp GAGGCAGCCAGGAATCTTCACATGACTGTGCTCTTTGCTCTCTCATaGTCTCCGGGCTCTTTTTCCTCCAGATCCAGTCCCAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: EAARNLHMTVLFALS*SPGSFSSRSSPKLL
Trigger: GAGCAACTTGGGACTGGATCTGGAGGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATGTGAAGATTCCTGGCTGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp CAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGACCAAGCTCAGGATGGTCCTGGTATAGGTaGGACTCCATTCTGAACGTG +
Preference number: 5 (lower is better)
Translates to: QGCSPSIRRITRQGPSSGWSWYR*DSILNV
Trigger: CACGTTCAGAATGGAGTCCAACCTATACCAGGACCA...TCCTGAGCTTGGTCCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp GGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGAGATCCAGTCCCAAGTaGCTCTCTCCTTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: GCLLNQGCSPSIRRITRQRSSPK*LSPSFA
Trigger: AGCAAAGGAAGGAGAGAGCAACTTGGGACTGGATCT...CTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp CGGGTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAAGATCCAGTCCCAAGTaGCTCTCTCCTTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RVSPQPGMLSEYKKNHQARSSPK*LSPSFA
Trigger: AGCAAAGGAAGGAGAGAGCAACTTGGGACTGGATCT...TGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp GTGTCTCCTCAACCAGGGATGCTCTCCGAGTATAAGAAGAATCACCAGGCAGGGAGATCCAGTCCCAAGTaGCTCTCTCCTTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VSPQPGMLSEYKKNHQAGRSSPK*LSPSFA
Trigger: AGCAAAGGAAGGAGAGAGCAACTTGGGACTGGATCT...CCCTGCCTGGTGATTCTTCTTATACTCGGAGAGCATCCCTGGTTGAGGAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp ATGTTTGCCCAGAGAGCCCCCAATGAGGGAGGTGGGGTGGGTTCCAAGCCTTCTCCAAGCCTTCTTCACTaGAGAACACTGTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: MFAQRAPNEGGGVGSKPSPSLLH*RTLYSE
Trigger: TTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGG...AGAAGGCTTGGAACCCACCCCACCTCCCTCATTGGGGGCTCTCTGGGCAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp TGGGTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGGGAAGGAGCAAAGATTaGCTTGGAGACGGCGCTCAG +
Preference number: 5 (lower is better)
Translates to: WVPSLLHLRTLYSESQMEGRSKD*LGDGAQ
Trigger: CTGAGCGCCGTCTCCAAGCAAATCTTTGCTCCTTCC...CTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215531.6
CDS CCA 90 bp TCTTCTTTCTCCTTGGCCTCTTTCTTCTCTCTCTTGTCTTCACTCTaGTCCTGGTATAGGTTGGACTCCATTCTGAACGTGGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSFSLASFFSLLSSL*SWYRLDSILNVVSS
Trigger: GGAGGAGACCACGTTCAGAATGGAGTCCAACCTATACCAGGACCAGAGTGAAGACAAGAGAGAGAAGAAAGAGGCCAAGGAGAAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS-3UTR CAA 90 bp TGGGTTCCAAGCCTTCTTCACTTGAGAACACTGTATTCTGAATCCCAGATGGAGTGGTCCTGGTATAGGTaGGACTCCATTCTGAACGTG +
Preference number: 5 (lower is better)
Translates to: WVPSLLHLRTLYSESQMEWSWYR*DSILNV
Trigger: CACGTTCAGAATGGAGTCCAACCTATACCAGGACCA...CTCCATCTGGGATTCAGAATACAGTGTTCTCAAGTGAAGAAGGCTTGGAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS GCA 72 bp ACCGCAGCCAGGCCCACCAGCCACGGCTTCAGGCGATaGTCCGTGGCTGCAGGAAGTTGGGGAGGTTCGACT +
Preference number: 6 (lower is better)
Translates to: TAARPTSHGFRR*SVAAGSWGGST
Trigger: AGTCGAACCTCCCCAACTTCCTGCAGCCACGGAGCATCGCCTGAAGCCGTGGCTGGTGGGCCTGGCTGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586804.1
ENST00000587847.1
CDS GCA 72 bp GCCCACCAGCCACGGCTTCAGGCGATGCTCCGTGGCTaGAGGAAGTTGGGGAGGTTCGACTCAGAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: AHQPRLQAMLRG*RKLGRFDSEEE
Trigger: TTCTTCCTCTGAGTCGAACCTCCCCAACTTCCTGCAGCCACGGAGCATCGCCTGAAGCCGTGGCTGGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586804.1
ENST00000587847.1
CDS CAA 72 bp GAGAAGGTCACTGGGGGTGCTCCGACAGAGGGGGTATaGGAAAGGGACGGAGCTTCAGAGACCTGGATGGCG +
Preference number: 6 (lower is better)
Translates to: EKVTGGAPTEGV*ERDGASETWMA
Trigger: CGCCATCCAGGTCTCTGAAGCTCCGTCCCTTTCCAATACCCCCTCTGTCGGAGCACCCCCAGTGACCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS TCA 72 bp ACCAGAGGCGGTTGGCCAGCAAGACCAAATAGACGATaGACAGGAAGCCGACTACCGCAGCCAGGCCCACCA +
Preference number: 6 (lower is better)
Translates to: TRGGWPARPNRR*TGSRLPQPGPP
Trigger: TGGTGGGCCTGGCTGCGGTAGTCGGCTTCCTGTTCATCGTCTATTTGGTCTTGCTGGCCAACCGCCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000586804.1
ENST00000587847.1
CDS CCA 72 bp AGAAGGTCACTGGGGGTGCTCCGACAGAGGGGGTATTaGAAAGGGACGGAGCTTCAGAGACCTGGATGGCGT +
Preference number: 6 (lower is better)
Translates to: RRSLGVLRQRGY*KGTELQRPGWR
Trigger: ACGCCATCCAGGTCTCTGAAGCTCCGTCCCTTTCCAATACCCCCTCTGTCGGAGCACCCCCAGTGACCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587847.1
CDS TCA 72 bp CTTCACTCTGGTCCTGGTATAGGTTGGACTCCATTCTaGACGTGGTCTCCTCCTCGTCCTCAGCCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: LHSGPGIGWTPF*TWSPPRPQPWP
Trigger: AGGCCAGGGCTGAGGACGAGGAGGAGACCACGTTCAGAATGGAGTCCAACCTATACCAGGACCAGAGTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000215531.6
ENST00000587847.1
CDS CCA 72 bp CACGGCTTCAGGCGATGCTCCGTGGCTGCAGGAAGTTaGGGAGGTTCGACTCAGAGGAAGAAAAGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: HGFRRCSVAAGS*GGSTQRKKRSE
Trigger: TTCTGACCTTTTCTTCCTCTGAGTCGAACCTCCCCAACTTCCTGCAGCCACGGAGCATCGCCTGAAGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586804.1
ENST00000587847.1
CDS TCA 72 bp CTTCACTCTGGTCCTGGTATAGGTTGGACTCCATTCTaGACGTGGTCTCCTCCTCGTCCTCAGCCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: LHSGPGIGWTPF*TWSPPRPQPCR
Trigger: TCTGCAGGGCTGAGGACGAGGAGGAGACCACGTTCAGAATGGAGTCCAACCTATACCAGGACCAGAGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591708.1
CDS GCA 72 bp AGAGGCAGCCAGGAATCTTCACATGACTGTGCTCTTTaGTCTCTCATGGTCTCCGGGCTCTTTTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: RGSQESSHDCAL*SLMVSGLFFLQ
Trigger: CTGGAGGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATGTGAAGATTCCTGGCTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS CCA 72 bp AGGAATCTTCACATGACTGTGCTCTTTGCTCTCTCATaGTCTCCGGGCTCTTTTTCCTCCAGATCCAGTCCC +
Preference number: 6 (lower is better)
Translates to: RNLHMTVLFALS*SPGSFSSRSSP
Trigger: GGGACTGGATCTGGAGGAAAAAGAGCCCGGAGACCATGAGAGAGCAAAGAGCACAGTCATGTGAAGATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS CAA 90 bp GCTCTTTTTCCTCCAGATCCAGTCCCAAGTTGCTCTCTCCTTCCTTaGCTGTCTTTTTCTCCTTCTTCCTCTTCTCTTCTTTCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: ALFPPDPVPSCSLLP*LSFSPSSSSLLSPW
Trigger: CCAAGGAGAAAGAAGAGAAGAGGAAGAAGGAGAAAAAGACAGCAAAGGAAGGAGAGAGCAACTTGGGACTGGATCTGGAGGAAAAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS CAA 72 bp TTCTCTTCTTTCTCCTTGGCCTCTTTCTTCTCTCTCTaGTCTTCACTCTGGTCCTGGTATAGGTTGGACTCC +
Preference number: 6 (lower is better)
Translates to: FSSFSLASFFSL*SSLWSWYRLDS
Trigger: GGAGTCCAACCTATACCAGGACCAGAGTGAAGACAAGAGAGAGAAGAAAGAGGCCAAGGAGAAAGAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS CAA 72 bp CCTCCAGATCCAGTCCCAAGTTGCTCTCTCCTTCCTTaGCTGTCTTTTTCTCCTTCTTCCTCTTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PPDPVPSCSLLP*LSFSPSSSSLL
Trigger: AAGAAGAGAAGAGGAAGAAGGAGAAAAAGACAGCAAAGGAAGGAGAGAGCAACTTGGGACTGGATCTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1
CDS CAA 90 bp TTCTTCCTCTTCTCTTCTTTCTCCTTGGCCTCTTTCTTCTCTCTCTaGTCTTCACTCTGGTCCTGGTATAGGTTGGACTCCATTCTGAAC +
Preference number: 6 (lower is better)
Translates to: FFLFSSFSLASFFSL*SSLWSWYRLDSILN
Trigger: GTTCAGAATGGAGTCCAACCTATACCAGGACCAGAGTGAAGACAAGAGAGAGAAGAAAGAGGCCAAGGAGAAAGAAGAGAAGAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000215531.6
ENST00000587847.1
ENST00000591708.1