Pregenerated sensors for SMIM23 (Homo sapiens)
Ensembl gene IDs: ENSG00000185662Ensembl transcript IDs: ENST00000330910.7, ENST00000523047.4, ENST00000639838.1, ENST00000640082.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGACCTCATGCTCCAGGTGCCCCAAGGTCATCCCAAAGGCAGGCTaGCGTGTAGAGCCTGGCTTGGCACAGGAGGCCCCAGCCAATGAT | + |
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Preference number: 1 (lower is better) Translates to: LTSCSRCPKVIPKAG*RVEPGLAQEAPAND Trigger: ATCATTGGCTGGGGCCTCCTGTGCCAAGCCAGGCTCTACACGGCAGCCTGCCTTTGGGATGACCTTGGGGCACCTGGAGCATGAGGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR CCA 90 bp | AGGGGGCCACGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTaGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGAA | + |
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Preference number: 1 (lower is better) Translates to: RGPRHGARENISAGL*CSANAVSVSIHECE Trigger: TTCACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACGTGGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGACGCACTCTGTATACACACCCTACATACATTGTCTTCCTATAAGGCAAATCTCAGCCGGGCTCTaGTGTTCCGCCAACGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: CQTHSVYTPYIHCLPIRQISAGL*CSANAV Trigger: AACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGAT...TTGCCTTATAGGAAGACAATGTATGTAGGGTGTGTATACAGAGTGCGTCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR-3UTR GCA 90 bp | ACATGCAGACACACAGGTAGTCTTTACCACATCCAGTTTTTGTCTAGAGTATCAGGGGCCACGTCATGGTaGCAGGGAGAATATCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TCRHTGSLYHIQFLSRVSGATSW*QGEYLS Trigger: GCTGAGATATTCTCCCTGGCACCATGACGTGGCCCC...TGATACTCTAGACAAAAACTGGATGTGGTAAAGACTACCTGTGTGTCTGCATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR GCA 72 bp | TGCTCCAGGTGCCCCAAGGTCATCCCAAAGGCAGGCTaGCGTGTAGAGCCTGGCTTGGCACAGGAGGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: CSRCPKVIPKAG*RVEPGLAQEAP Trigger: TGGGGCCTCCTGTGCCAAGCCAGGCTCTACACGGCAGCCTGCCTTTGGGATGACCTTGGGGCACCTGGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR CCA 72 bp | CGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTaGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCAT | + |
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Preference number: 3 (lower is better) Translates to: RHGARENISAGL*CSANAVSVSIH Trigger: ATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR CCA 72 bp | ACAACGTCTCAAGAAAGTAGAAGAGTCCTGAACCTATaGCTGGCTCTGAAGCCCGTGTTTGTTCCAGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: TTSQESRRVLNL*LALKPVFVPGG Trigger: GCCCCCTGGAACAAACACGGGCTTCAGAGCCAGCCATAGGTTCAGGACTCTTCTACTTTCTTGAGACGTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| 3UTR-3UTR CAA 90 bp | ACATGCAGACACACAGGTAGTCTTTACCACATCCAGTTTTTGTCTAGAGTATCAAACTACTTTATTTTCTaGCCTGACTGGAACTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: TCRHTGSLYHIQFLSRVSNYFIF*PDWNFK Trigger: CTTGAAGTTCCAGTCAGGCAAGAAAATAAAGTAGTT...TGATACTCTAGACAAAAACTGGATGTGGTAAAGACTACCTGTGTGTCTGCATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | GGGGGCCACGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCCTCCCCACCTTTGTaGTCTCTCCCCAGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGHVMVPGRISQPGSGVPPSPPL*SLPRAQ Trigger: CTGGGCCCTGGGGAGAGAGCACAAAGGTGGGGAGGG...CGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACGTGGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | GGGGGCCACGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCTGCCGTGTAGAGCCTaGCTTGGCACAGGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GGHVMVPGRISQPGSGVPLPCRA*LGTGGP Trigger: GGGGCCTCCTGTGCCAAGCCAGGCTCTACACGGCAG...CGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACGTGGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | ATGCTCCAGGTGCCCCAAGGTCATCCCAAAGGCAGGCTGCCGTGTAGAGCCTGGCTCCGTTCAAGCAGCTaGGCTGCCACCTGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: MLQVPQGHPKGRLPCRAWLRSSS*AATCSA Trigger: AGCAGAGCAGGTGGCAGCCCAGCTGCTTGAACGGAG...CCAGGCTCTACACGGCAGCCTGCCTTTGGGATGACCTTGGGGCACCTGGAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | GCCACGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAATTCAAGCAGCTGGGCTaGCACCTGCTCTGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ATSWCQGEYLSRALVFRQFKQLG*HLLCCH Trigger: GTGGCAGCAGAGCAGGTGGCAGCCCAGCTGCTTGAA...TTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | GGGGGCCACGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGACACCTGAGGGAGTATaGGGAAGGTTGCCCAATATG | + |
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Preference number: 4 (lower is better) Translates to: GGHVMVPGRISQPGSGVPTPEGV*GRLPNM Trigger: CATATTGGGCAACCTTCCTCATACTCCCTCAGGTGT...CGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACGTGGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | ATGCTCCAGGTGCCCCAAGGTCATCCCAAAGGCAGGCTGCCGTGTAGAGCCTGGCTGACACCTCCCAACTaGTTCCCCATATCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: MLQVPQGHPKGRLPCRAWLTPPN*FPISLC Trigger: GCACAGAGATATGGGGAAGCAGTTGGGAGGTGTCAG...CCAGGCTCTACACGGCAGCCTGCCTTTGGGATGACCTTGGGGCACCTGGAGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCAGGTCCCACGCTAGCTaGTCCAGCTGCTGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: RENISAGLWCSANAVSVSRSHAS*SSCCTS Trigger: AGAGGTGCAGCAGCTGGAGCAGCTAGCGTGGGACCT...GCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | AGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCGGAGGCCCCAGCCAATaGTCTCTGATGCTGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: RENISAGLWCSANAVSVSGGPSQ*SLMLTS Trigger: TGAGGTCAGCATCAGAGATCATTGGCTGGGGCCTCC...GCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | CAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGCTGGTCCCAACCTCCTaGTCTGTGCCAGACGCACTC | + |
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Preference number: 4 (lower is better) Translates to: QPGSGVPPTLFLSAFMNVLVPTS*SVPDAL Trigger: GAGTGCGTCTGGCACAGAGCAGGAGGTTGGGACCAG...CACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATCCCAAAGGCAGGCTaGCGTGTAGAGCCTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RENISAGLWCSANAVSVSIPKAG*RVEPGL Trigger: CAAGCCAGGCTCTACACGGCAGCCTGCCTTTGGGAT...GCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | GCCACGTCATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAAGCCCACTCCCACAAGTaGCTTTTATATGTGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATSWCQGEYLSRALVFRQAHSHK*LLYVEQ Trigger: CTGCTCCACATATAAAAGTCACTTGTGGGAGTGGGC...TTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATGACGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | CAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGGGGGCCACGTCATGGTaGCAGGGAGAATATCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QPGSGVPPTLFLSAFMNVGATSW*QGEYLS Trigger: GCTGAGATATTCTCCCTGGCACCATGACGTGGCCCC...CACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | AGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCAGCTGCTCCAGCTGCTaGACCTCTTCCTCTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: RENISAGLWCSANAVSVSSCSSC*TSSSNF Trigger: GAAGTTAGAGGAAGAGGTGCAGCAGCTGGAGCAGCT...GCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | GGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGAACAGCGAGGGCTCGTTGGTCTaGTATTCAAGCCCCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GSGVPPTLFLSAFMNVNSEGSLV*YSSPWG Trigger: TCCCCAGGGGCTTGAATATCAGACCAACGAGCCCTC...GCTGTTCACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | GGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGAACAGCGAGCAGTGCTCCTCCTaGTGTGGCTCTCCCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSGVPPTLFLSAFMNVNSEQCSS*CGSPRR Trigger: TCTTCTGGGAGAGCCACACCAGGAGGAGCACTGCTC...GCTGTTCACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | CAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGCACCAAGATCAGCAATaGCAACAGCGTCTGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPGSGVPPTLFLSAFMNVHQDQQ*QQRLLL Trigger: GAGAAGCAGACGCTGTTGGCATTGCTGATCTTGGTG...CACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | GGGAGTATGAGGAAGGTTGCCCAATATGCCCATGAAGTAAAAGAGAGATGGGGGGTGCTCCTCCTGGTGTaGCTCTCCCAGAAGAGCATC | + |
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Preference number: 4 (lower is better) Translates to: GSMRKVAQYAHEVKERWGVLLLV*LSQKSI Trigger: GATGCTCTTCTGGGAGAGCCACACCAGGAGGAGCAC...CCCCCATCTCTCTTTTACTTCATGGGCATATTGGGCAACCTTCCTCATACTCCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | CAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGCTTTATCGGTTCTTCTaGGGGCTCGTTGGTCTGATA | + |
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Preference number: 4 (lower is better) Translates to: QPGSGVPPTLFLSAFMNVLYRFF*GLVGLI Trigger: TATCAGACCAACGAGCCCTCAGAAGAACCGATAAAG...CACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | CAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGTTCTCCGAGAAGACATaGAACTTCTCCTTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QPGSGVPPTLFLSAFMNVFSEKT*NFSFSQ Trigger: CTGGCTGAAGGAGAAGTTGCATGTCTTCTCGGAGAA...CACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | GGGAGTATGAGGAAGGTTGCCCAATATGCCCATGAAGTAAAAGAGAGATGGGGGGCTAGCTGCTCCAGCTaGTGCACCTCTTCCTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: GSMRKVAQYAHEVKERWGASCSS*CTSSSN Trigger: GTTAGAGGAAGAGGTGCAGCAGCTGGAGCAGCTAGC...CCCCCATCTCTCTTTTACTTCATGGGCATATTGGGCAACCTTCCTCATACTCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | CTGTGCCAGACGCACTCTGTATACACACCCTACATACATTGTCTTCCTATAAGGCTGCCACCTGCCTTCTaGTGTCCACTTGCTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LCQTHSVYTPYIHCLPIRLPPAF*CPLAGL Trigger: CAACCCAGCAAGTGGACAGCAGAAGGCAGGTGGCAG...CCTTATAGGAAGACAATGTATGTAGGGTGTGTATACAGAGTGCGTCTGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | CAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTTCTGTCAGCATTCATGAATGTGTTCCCCATATCTCTGTaGTCAAGTACAGCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: QPGSGVPPTLFLSAFMNVFPISL*SSTAPR Trigger: TCTTGGTGCTGTACTTGAGCACAGAGATATGGGGAA...CACATTCATGAATGCTGACAGAAACAGCGTTGGCGGAACACCAGAGCCCGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | AGTATGAGGAAGGTTGCCCAATATGCCCATGAAGTAAAAGAGAGATGGGGGAGACGTCATCACAGTGGCTaGCCCTTCTCCGTTCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SMRKVAQYAHEVKERWGRRHHSG*PFSVQA Trigger: TGCTTGAACGGAGAAGGGGCAGCCACTGTGATGACG...TCTCCCCCATCTCTCTTTTACTTCATGGGCATATTGGGCAACCTTCCTCATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | ACGCTGTTTCTGTCAGCATTCATGAATGTGAACAGCGGACTTCATTTCCCAACTATCTCAGCCGGGCTCTaGTGTTCCGCCAACGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TLFLSAFMNVNSGLHFPTISAGL*CSANAV Trigger: AACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGAT...AGTTGGGAAATGAAGTCCGCTGTTCACATTCATGAATGCTGACAGAAACAGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | TACACACCCTACATACATTGTCTTCCTATAAGGCAAAGTGTGTTTCCCCGATTTACCTCATGCTCCAGGTaGCCCAAGGTCATCCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: YTPYIHCLPIRQSVFPRFTSCSR*PKVIPK Trigger: CTTTGGGATGACCTTGGGGCACCTGGAGCATGAGGT...AAATCGGGGAAACACACTTTGCCTTATAGGAAGACAATGTATGTAGGGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | AGCATTCATGAATGTGAACAGCGGACTTCATTTCCCAACTACTTTATTTTCTTGCAGGGGGCCACGTCATaGTGCCAGGGAGAATATCTC | + |
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Preference number: 4 (lower is better) Translates to: SIHECEQRTSFPNYFIFLQGATS*CQGEYL Trigger: GAGATATTCTCCCTGGCACCATGACGTGGCCCCCTG...CAAGAAAATAAAGTAGTTGGGAAATGAAGTCCGCTGTTCACATTCATGAATGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | ACATGCAGACACACAGGTAGTCTTTACCACATCCAGTTTTTGTCTAGAGTATCACTTCTGAGGGCTCGTTaGTCTGATATTCAAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TCRHTGSLYHIQFLSRVSLLRAR*SDIQAP Trigger: AGGGGCTTGAATATCAGACCAACGAGCCCTCAGAAG...TGATACTCTAGACAAAAACTGGATGTGGTAAAGACTACCTGTGTGTCTGCATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | TACACACCCTACATACATTGTCTTCCTATAAGGCAAAGTGTGTTTCCCCGATTTAAGCCCCTGGGGAACTaGAAGATTCTGGTAGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: YTPYIHCLPIRQSVFPRFKPLGN*KILVVV Trigger: AACTACTACCAGAATCTTGCAGTTCCCCAGGGGCTT...AAATCGGGGAAACACACTTTGCCTTATAGGAAGACAATGTATGTAGGGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | CCGATTTTTATATGTGAGGAAACTGAGTCTCAGGTTAAGGAAATTTACACAACGTTCTCTGATCCTTTCTaGCACCTCCCAACTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PIFICEETESQVKEIYTTFSDPF*HLPTAS Trigger: GGAAGCAGTTGGGAGGTGTCAGAAAGGATCAGAGAA...CGTTGTGTAAATTTCCTTAACCTGAGACTCAGTTTCCTCACATATAAAAATCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | AGTGTGTTTCCCCGATTTTTATATGTGAGGAAACTGAGTCTCAGGTTAAGGAAACCTTCAGCCAGTTCCTaGTGGTCTTTATCGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVFPRFLYVRKLSLRLRKPSASS*WSLSVL Trigger: AAGAACCGATAAAGACCATCAGGAACTGGCTGAAGG...TTTCCTTAACCTGAGACTCAGTTTCCTCACATATAAAAATCGGGGAAACACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | TTTTTATATGTGAGGAAACTGAGTCTCAGGTTAAGGAAATTTACACAACGTCTCTTCTCGTCATCACAGTaGCTGCCCCTTCTCCGTTCA | + |
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Preference number: 4 (lower is better) Translates to: FLYVRKLSLRLRKFTQRLFSSSQ*LPLLRS Trigger: TGAACGGAGAAGGGGCAGCCACTGTGATGACGAGAA...GAGACGTTGTGTAAATTTCCTTAACCTGAGACTCAGTTTCCTCACATATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | AGCATTCATGAATGTGAACAGCGGACTTCATTTCCCAACTACTTTATTTTCTTGTGCCCAATATGCCCATaGAGTAAAAGAGAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: SIHECEQRTSFPNYFIFLCPICP*SKREMG Trigger: CCCCATCTCTCTTTTACTTCATGGGCATATTGGGCA...CAAGAAAATAAAGTAGTTGGGAAATGAAGTCCGCTGTTCACATTCATGAATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR GCA 90 bp | TTTTTATATGTGAGGAAACTGAGTCTCAGGTTAAGGAAATTTACACAACGTCTCTTATATGTGGAGCAGTaGTCCTCCTGGTGTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FLYVRKLSLRLRKFTQRLLYVEQ*SSWCGS Trigger: AGAGCCACACCAGGAGGAGCACTGCTCCACATATAA...GAGACGTTGTGTAAATTTCCTTAACCTGAGACTCAGTTTCCTCACATATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR TCA 90 bp | CCGATTTTTATATGTGAGGAAACTGAGTCTCAGGTTAAGGAAATTTACACAACGTCCTCATTATACACCTaGGGGAGTATGAGGAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: PIFICEETESQVKEIYTTSSLYT*GSMRKV Trigger: AACCTTCCTCATACTCCCTCAGGTGTATAATGAGGA...CGTTGTGTAAATTTCCTTAACCTGAGACTCAGTTTCCTCACATATAAAAATCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CCA 90 bp | TTTTTATATGTGAGGAAACTGAGTCTCAGGTTAAGGAAATTTACACAACGTCTCGAGAGATGGGGGAGATaGCCACCAATTAAAATTAAT | + |
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Preference number: 4 (lower is better) Translates to: FLYVRKLSLRLRKFTQRLERWGR*PPIKIN Trigger: ATTAATTTTAATTGGTGGCCATCTCCCCCATCTCTC...GAGACGTTGTGTAAATTTCCTTAACCTGAGACTCAGTTTCCTCACATATAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CAA 90 bp | CATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTCGTGTAGAGCCTGGCTaGGCACAGGAGGCCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: HGARENISAGLWCSANAVRVEPG*AQEAPA Trigger: GGCTGGGGCCTCCTGTGCCAAGCCAGGCTCTACACG...AACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS GCA 90 bp | AGATCAGCAATGCCAACAGCGTCTGCTTCTCGTCATCACAGTGGCTaGCCCTTCTCCGTTCAAGCAGCTGGGCTGCCACCTGCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RSAMPTASASRHHSG*PFSVQAAGLPPALL Trigger: CAGCAGAGCAGGTGGCAGCCCAGCTGCTTGAACGGAGAAGGGGCAGCCACTGTGATGACGAGAAGCAGACGCTGTTGGCATTGCTGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 |
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| CDS GCA 90 bp | TCTCCCAGAAGAGCATCCAGCCACAGTTCCAGGTCCCACGCTAGCTaGTCCAGCTGCTGCACCTCTTCCTCTAACTTCTCCGAGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: SPRRASSHSSRSHAS*SSCCTSSSNFSEKT Trigger: TGTCTTCTCGGAGAAGTTAGAGGAAGAGGTGCAGCAGCTGGAGCAGCTAGCGTGGGACCTGGAACTGTGGCTGGATGCTCTTCTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS CCA 90 bp | CAGGTGCAAGTGACTTTTATATGTGGAGCAGTGCTCCTCCTGGTGTaGCTCTCCCAGAAGAGCATCCAGCCACAGTTCCAGGTCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: QVQVTFICGAVLLLV*LSQKSIQPQFQVPR Trigger: GCGTGGGACCTGGAACTGTGGCTGGATGCTCTTCTGGGAGAGCCACACCAGGAGGAGCACTGCTCCACATATAAAAGTCACTTGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330910.7 |
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| CDS CCA 90 bp | CTCCCACAAGTGACTTTTATATGTGGAGCAGTGCTCCTCCTGGTGTaGCTCTCCCAGAAGAGCATCCAGCCACAGTTCCAGGTCCCACGC | + |
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Preference number: 5 (lower is better) Translates to: LPQVTFICGAVLLLV*LSQKSIQPQFQVPR Trigger: GCGTGGGACCTGGAACTGTGGCTGGATGCTCTTCTGGGAGAGCCACACCAGGAGGAGCACTGCTCCACATATAAAAGTCACTTGTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS GCA 90 bp | AGAGCATCCAGCCACAGTTCCAGGTCCCACGCTAGCTGCTCCAGCTaGTGCACCTCTTCCTCTAACTTCTCCGAGAAGACATGCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: RASSHSSRSHASCSS*CTSSSNFSEKTCNF Trigger: GAAGTTGCATGTCTTCTCGGAGAAGTTAGAGGAAGAGGTGCAGCAGCTGGAGCAGCTAGCGTGGGACCTGGAACTGTGGCTGGATGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS-3UTR CAA 90 bp | CATGGTGCCAGGGAGAATATCTCAGCCGGGCTCTGGTGTTCCGCCAACGCTGTTCACACCCTACATACATaGTCTTCCTATAAGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: HGARENISAGLWCSANAVHTLHT*SSYKAK Trigger: CTTTGCCTTATAGGAAGACAATGTATGTAGGGTGTG...AACAGCGTTGGCGGAACACCAGAGCCCGGCTGAGATATTCTCCCTGGCACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CAA 90 bp | TGCCAGACGCACTCTGTATACACACCCTACATACATTGTCTTCCTATAAGGCAACCTTCTGCTGTCCACTaGCTGGGTTGCCATGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CQTHSVYTPYIHCLPIRQPSAVH*LGCHGL Trigger: GAGGCCATGGCAACCCAGCAAGTGGACAGCAGAAGG...TTGCCTTATAGGAAGACAATGTATGTAGGGTGTGTATACAGAGTGCGTCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS TCA 90 bp | GTACAGCACCAAGATCAGCAATGCCAACAGCGTCTGTTGAAAGGATaGATAATGAACGGTCTCAAACTGCAGGCTCTGAGAGGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VQHQDQQCQQRLLKG*IMNGLKLQALRGQE Trigger: TTCCTGGCCTCTCAGAGCCTGCAGTTTGAGACCGTTCATTATTCATCCTTTCAACAGACGCTGTTGGCATTGCTGATCTTGGTGCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640082.1 |
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| CDS GCA 90 bp | CAGGGTAAGTCCCTTCCACACGTTATTTCATCTAATTCTCCTAACTaGCCGGCAAGGCCGGCACTGTTAGTTTCTGTTGGGAACGTTACT | + |
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Preference number: 5 (lower is better) Translates to: QGKSLPHVISSNSPN*PARPALLVSVGNVT Trigger: AGTAACGTTCCCAACAGAAACTAACAGTGCCGGCCTTGCCGGGCAGTTAGGAGAATTAGATGAAATAACGTGTGGAAGGGACTTACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640082.1 |
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| CDS TCA 90 bp | CTAACTTCTCCGAGAAGACATGCAACTTCTCCTTCAGCCAGTTCCTaGTGGTCTTTATCGGTTCTTCTGAGGGCTCGTTGGTCTGATATT | + |
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Preference number: 5 (lower is better) Translates to: LTSPRRHATSPSASS*WSLSVLLRARWSDI Trigger: AATATCAGACCAACGAGCCCTCAGAAGAACCGATAAAGACCATCAGGAACTGGCTGAAGGAGAAGTTGCATGTCTTCTCGGAGAAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS GCA 90 bp | ATGAATGTGAACAGCGGACTTCATTTCCCAACTACTTTATTTTCTTaGCTGACTGGAACTTCAAGAGTCAGAGCTCTGCCCCGCTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: MNVNSGLHFPTTLFS*LTGTSRVRALPRLE Trigger: CTCTAAGCGGGGCAGAGCTCTGACTCTTGAAGTTCCAGTCAGGCAAGAAAATAAAGTAGTTGGGAAATGAAGTCCGCTGTTCACATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS-3UTR CAA 90 bp | AGCATTCATGAATGTGAACAGCGGACTTCATTTCCCAACTACTTTATTTTCTTGAACTACTTTATTTTCTaGCCTGACTGGAACTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: SIHECEQRTSFPNYFIFLNYFIF*PDWNFK Trigger: CTTGAAGTTCCAGTCAGGCAAGAAAATAAAGTAGTT...CAAGAAAATAAAGTAGTTGGGAAATGAAGTCCGCTGTTCACATTCATGAATGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS GCA 72 bp | ATGCCAACAGCGTCTGCTTCTCGTCATCACAGTGGCTaGCCCTTCTCCGTTCAAGCAGCTGGGCTGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: MPTASASRHHSG*PFSVQAAGLPP Trigger: AGGTGGCAGCCCAGCTGCTTGAACGGAGAAGGGGCAGCCACTGTGATGACGAGAAGCAGACGCTGTTGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 |
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| CDS GCA 72 bp | GTCCACTTGCTGGGTTGCCATGGCCTCAGATCTGGCTaGCTGGGTGGACCACACTCAACAGACAGAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: VHLLGCHGLRSG*LGGPHSTDRRA Trigger: TGCCCTTCTGTCTGTTGAGTGTGGTCCACCCAGGCAGCCAGATCTGAGGCCATGGCAACCCAGCAAGTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523047.4 |
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| CDS CCA 72 bp | AGCAATGCCAACAGCGTCTGCTTCTCGTCATCACAGTaGCTGCCCCTTCTCCGTTCAAGCAGCTGGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SNANSVCFSSSQ*LPLLRSSSWAA Trigger: GGCAGCCCAGCTGCTTGAACGGAGAAGGGGCAGCCACTGTGATGACGAGAAGCAGACGCTGTTGGCATTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 |
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| CDS GCA 72 bp | AGAGCATCCAGCCACAGTTCCAGGTCCCACGCTAGCTaGTCCAGCTGCTGCACCTCTTCCTCTAACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RASSHSSRSHAS*SSCCTSSSNFS Trigger: GGAGAAGTTAGAGGAAGAGGTGCAGCAGCTGGAGCAGCTAGCGTGGGACCTGGAACTGTGGCTGGATGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS TCA 72 bp | CTTCAGCCAGTTCCTGATGGTCTTTATCGGTTCTTCTaGGGGCTCGTTGGTCTGATATTCAAGCCCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LQPVPDGLYRFF*GLVGLIFKPLG Trigger: CCCCAGGGGCTTGAATATCAGACCAACGAGCCCTCAGAAGAACCGATAAAGACCATCAGGAACTGGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS GCA 72 bp | TCCCTTCCACACGTTATTTCATCTAATTCTCCTAACTaGCCGGCAAGGCCGGCACTGTTAGTTTCTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLPHVISSNSPN*PARPALLVSVG Trigger: CCCAACAGAAACTAACAGTGCCGGCCTTGCCGGGCAGTTAGGAGAATTAGATGAAATAACGTGTGGAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640082.1 |
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| CDS TCA 72 bp | GGGGAACTGCAAGATTCTGGTAGTAGTTACATTCTCTaGTCCTTTCTGACACCTCCCAACTGCTTCCCCATA | + |
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Preference number: 6 (lower is better) Translates to: GELQDSGSSYIL*SFLTPPNCFPI Trigger: TATGGGGAAGCAGTTGGGAGGTGTCAGAAAGGATCAGAGAATGTAACTACTACCAGAATCTTGCAGTTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000330910.7 ENST00000523047.4 ENST00000639838.1 ENST00000640082.1 |
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| CDS CAA 90 bp | CATGAATGTGAACAGCGGACTTCATTTCCCAACTACTTTATTTTCTaGCCTGACTGGAACTTCAAGAGTCAGAGCTCTGCCCCGCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: HECEQRTSFPNYFIF*PDWNFKSQSSAPLR Trigger: TCTAAGCGGGGCAGAGCTCTGACTCTTGAAGTTCCAGTCAGGCAAGAAAATAAAGTAGTTGGGAAATGAAGTCCGCTGTTCACATTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639838.1 |
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| CDS TCA 72 bp | CAAGATCAGCAATGCCAACAGCGTCTGTTGAAAGGATaGATAATGAACGGTCTCAAACTGCAGGCTCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QDQQCQQRLLKG*IMNGLKLQALR Trigger: TCTCAGAGCCTGCAGTTTGAGACCGTTCATTATTCATCCTTTCAACAGACGCTGTTGGCATTGCTGATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640082.1 |
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