Pregenerated sensors for SMIM2-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000235285

Ensembl transcript IDs: ENST00000415082.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CAGCCTCTGGAAGACGAGGGCATTCCAGGGAGGAAGGGCGGCATATaGACCAGCATGGAGGCGGGAGGAGACAGCACGATGTACTTGGCA	+
Preference number: 5 (lower is better) Translates to: QPLEDEGIPGRKGGI*TSMEAGGDSTMYLA Trigger: TGCCAAGTACATCGTGCTGTCTCCTCCCGCCTCCATGCTGGTGCATATGCCGCCCTTCCTCCCTGGAATGCCCTCGTCTTCCAGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS GCA 90 bp	TCCATCCTTGACTCTTTTCATTCCACGCTGATGTCTTCTGGGCTCTaGGCCTCAGGGGAGAACTTGCAATGCTGGGATCACCTTGACGTG	+
Preference number: 5 (lower is better) Translates to: SILDSFHSTLMSSGL*ASGENLQCWDHLDV Trigger: CACGTCAAGGTGATCCCAGCATTGCAAGTTCTCCCCTGAGGCGCAGAGCCCAGAAGACATCAGCGTGGAATGAAAAGAGTCAAGGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS CCA 90 bp	CTCAAAGCCTCCCTTTCCCTTGTTCCCATGTGTAGCATTCTGTTTTaGGAGCACAGAATGTCCTCTGGTCTAGAGGAAGCTAAGCCACTG	+
Preference number: 5 (lower is better) Translates to: LKASLSLVPMCSILF*EHRMSSGLEEAKPL Trigger: CAGTGGCTTAGCTTCCTCTAGACCAGAGGACATTCTGTGCTCCCAAAACAGAATGCTACACATGGGAACAAGGGAAAGGGAGGCTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS CCA 72 bp	GCATTCCAGGGAGGAAGGGCGGCATATGCACCAGCATaGAGGCGGGAGGAGACAGCACGATGTACTTGGCAT	+
Preference number: 6 (lower is better) Translates to: AFQGGRAAYAPA*RREETARCTWH Trigger: ATGCCAAGTACATCGTGCTGTCTCCTCCCGCCTCCATGCTGGTGCATATGCCGCCCTTCCTCCCTGGAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS CCA 72 bp	CAGGGGAGAACTTGCAATGCTGGGATCACCTTGACGTaGCAGGGATGTTCCTTGCAAAGCCTTATCCTGCTC	+
Preference number: 6 (lower is better) Translates to: QGRTCNAGITLT*QGCSLQSLILL Trigger: GAGCAGGATAAGGCTTTGCAAGGAACATCCCTGCCACGTCAAGGTGATCCCAGCATTGCAAGTTCTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS CAA 72 bp	CTGCTCAATCTTCACCTAATTACGTTGGTTTTAGGCTaGAAGCAGGGGCCTTGCTGGCTGACCTCTCAAAGC	+
Preference number: 6 (lower is better) Translates to: LLNLHLITLVLG*KQGPCWLTSQS Trigger: GCTTTGAGAGGTCAGCCAGCAAGGCCCCTGCTTCAAGCCTAAAACCAACGTAATTAGGTGAAGATTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS CAA 90 bp	TGTTCCTTGCAAAGCCTTATCCTGCTCAATCTTCACCTAATTACGTaGGTTTTAGGCTTGAAGCAGGGGCCTTGCTGGCTGACCTCTCAA	+
Preference number: 6 (lower is better) Translates to: CSLQSLILLNLHLIT*VLGLKQGPCWLTSQ Trigger: TTGAGAGGTCAGCCAGCAAGGCCCCTGCTTCAAGCCTAAAACCAACGTAATTAGGTGAAGATTGAGCAGGATAAGGCTTTGCAAGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415082.1
CDS CAA 90 bp	AGAACTTGCAATGCTGGGATCACCTTGACGTGGCAGGGATGTTCCTaGCAAAGCCTTATCCTGCTCAATCTTCACCTAATTACGTTGGTT	+
Preference number: 6 (lower is better) Translates to: RTCNAGITLTWQGCS*QSLILLNLHLITLV Trigger: AACCAACGTAATTAGGTGAAGATTGAGCAGGATAAGGCTTTGCAAGGAACATCCCTGCCACGTCAAGGTGATCCCAGCATTGCAAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415082.1

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