Pregenerated sensors for SMIM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000139656Ensembl transcript IDs: ENST00000400419.2, ENST00000617002.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGCACACTTGCACACTCAGCTTCTGAATGTCCAGAGCAGTCCTaGGTCTTGCCTGAGAAAAATACTCAGGTTCTTGGGCTTCATCTC | + |
|
Preference number: 1 (lower is better) Translates to: HSTLAHSASECPEQS*VLPEKNTQVLGLHL Trigger: GAGATGAAGCCCAAGAACCTGAGTATTTTTCTCAGGCAAGACTCAGGACTGCTCTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR TCA 90 bp | AAGAAACCAAAGTTGTGGGTACCATGTTTGCAATTCCGTTTTAGCTaGGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: KKPKLWVPCLQFRFS*VLWTITSLSGSLEE Trigger: TTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTTTGGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR GCA 90 bp | AACCAAAGTTGTGGGTACCATGTTTGCAATTCCGTTTTAGCTGAGTaGTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAAT | + |
|
Preference number: 1 (lower is better) Translates to: NQSCGYHVCNSVLAE*FGLSRPSVAPWRKN Trigger: ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTTTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR CAA 90 bp | TCCTTGGCCTCTTCAGTGGTGGTGGCCTTGAACTACACAGCACACTaGCACACTCAGCTTCTGAATGTCCAGAGCAGTCCTGAGTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLASSVVVALNYTAH*HTQLLNVQSSPESC Trigger: GCAAGACTCAGGACTGCTCTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGAGGCCAAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR CAA 90 bp | GCACCTCTCCCTGGAAGCCAGGTTAGAATTCCTACTAAGGTGTCCTaGGCCTCTTCAGTGGTGGTGGCCTTGAACTACACAGCACACTTG | + |
|
Preference number: 2 (lower is better) Translates to: APLPGSQVRIPTKVS*ASSVVVALNYTAHL Trigger: CAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGAGGCCAAGGACACCTTAGTAGGAATTCTAACCTGGCTTCCAGGGAGAGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAATCAGTGGTGGTGGCCTTaGACTACACAGCACACTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LAECFGLSRPSVAPWRKNQWWWP*TTQHTC Trigger: GCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTG...ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCAATTTGGAAGCACCTCTCCCTGGAAGCCAGGTTAGAATTCCTACTAAGGTGCACACTCAGCTTCTaGATGTCCAGAGCAGTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: GPIWKHLSLEARLEFLLRCTLSF*MSRAVL Trigger: CAGGACTGCTCTGGACATTCAGAAGCTGAGTGTGCA...CCTTAGTAGGAATTCTAACCTGGCTTCCAGGGAGAGGTGCTTCCAAATTGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGCAAGGAACACTACAGTaGCTACAAACCCTATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SVLAECFGLSRPSVAPWRQGTLQ*LQTLCA Trigger: GGCACATAGGGTTTGTAGTCACTGTAGTGTTCCTTG...CCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGCCTACAGGGCCAATTTaGAAGCACCTCTCCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NSVLAECFGLSRPSVAPWPTGPI*KHLSLE Trigger: TTCCAGGGAGAGGTGCTTCCAAATTGGCCCTGTAGG...CCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAATAGACTGGGAGAGAGATaGGAGCTGATAGACCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LAECFGLSRPSVAPWRKNRLGER*ELIDQR Trigger: CCTCTGGTCTATCAGCTCCCATCTCTCTCCCAGTCT...ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAATAGCCATCATCTTATCTaGCCACACAGACACCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LAECFGLSRPSVAPWRKNSHHLI*PHRHLP Trigger: TGGGAGGTGTCTGTGTGGTCAGATAAGATGATGGCT...ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR CAA 90 bp | AGAATTCCTACTAAGGTGTCCTTGGCCTCTTCAGTGGTGGTGGCCTaGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RIPTKVSLASSVVVA*NYTAHLHTQLLNVQ Trigger: CTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGAGGCCAAGGACACCTTAGTAGGAATTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTCCAGGTCCTGAGTCTTGCCTaGGAAAAATACTCAGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VVALNYTAHLHTQLLNVQVLSLA*EKYSGS Trigger: AGAACCTGAGTATTTTTCTCAGGCAAGACTCAGGAC...CTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAGCCATCATCTTATCTGACCACACAGACACCTCCCAGCAGATGAATGCATCAACTACAAACCCTATGTaGCTCATTCAACAGGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VAIILSDHTDTSQQMNASTTNPM*LIQQVS Trigger: TGACACCTGTTGAATGAGGCACATAGGGTTTGTAGT...TGATGCATTCATCTGCTGGGAGGTGTCTGTGTGGTCAGATAAGATGATGGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGATAAGAAACCAAAGTTGTGGGTACCATGTTTGCAATTCCGTTTTAGCTGAGAGCAGTCCTGAGTCTTaGCTGAGAAAAATACTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: MIRNQSCGYHVCNSVLAESSPES*LRKILR Trigger: CCTGAGTATTTTTCTCAGGCAAGACTCAGGACTGCT...CTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTTTGGTTTCTTATCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACCTAAACCATGGAAATTaGGAACAAGCACTTACTCGC | + |
|
Preference number: 2 (lower is better) Translates to: ESDNISLLPHNHKEHYSDLNHGN*EQALTR Trigger: GCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAG...GTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCACTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACACTGAAGACTAAACCATaGAAATTGGGAACAAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: VIILAYYLTTTRNTTVTTLKTKP*KLGTST Trigger: AGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAG...TGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR GCA 72 bp | TGTGGGTACCATGTTTGCAATTCCGTTTTAGCTGAGTaGTTTGGACTATCACGTCCCTCAGTGGCTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: CGYHVCNSVLAE*FGLSRPSVAPW Trigger: CCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATTGCAAACATGGTACCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTTGGAAGCACCTCTCCCTGGAAGCCAGGTTAGAATTCCTACTAAGGTGTCCTCAGTGGTGGTGGCCTaGAACTACACAGCACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLEAPLPGSQVRIPTKVSSVVVA*NYTAHL Trigger: CAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGA...GGACACCTTAGTAGGAATTCTAACCTGGCTTCCAGGGAGAGGTGCTTCCAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAACTACACAGCACACTaGCACACTCAGCTTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: NSVLAECFGLSRPSVAPWNYTAH*HTQLLN Trigger: ATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTT...CCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR TCA 72 bp | CTTGCACACTCAGCTTCTGAATGTCCAGAGCAGTCCTaGGTCTTGCCTGAGAAAAATACTCAGGTTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAHSASECPEQS*VLPEKNTQVLG Trigger: CCCAAGAACCTGAGTATTTTTCTCAGGCAAGACTCAGGACTGCTCTGGACATTCAGAAGCTGAGTGTGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR TCA 72 bp | AAGTTGTGGGTACCATGTTTGCAATTCCGTTTTAGCTaGGTGCTTTGGACTATCACGTCCCTCAGTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLWVPCLQFRFS*VLWTITSLSGS Trigger: GGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAACTGAAGACTAAACCATGGAAATTGGGAACAAGCACTTACTCGCTTAGACCTACTAAGGTGTCCTaGGCCTCTTCAGTGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LKLKTKPWKLGTSTYSLRPTKVS*ASSVVV Trigger: CACCACCACTGAAGAGGCCAAGGACACCTTAGTAGG...TCTAAGCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR GCA 72 bp | ACCACAAGGAACACTACAGTGACTACAAACCCTATGTaGCTCATTCAACAGGTGTCACAGAATAAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TTRNTTVTTNPM*LIQQVSQNKEK Trigger: TTTTTCTTTATTCTGTGACACCTGTTGAATGAGGCACATAGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR GCA 72 bp | TGGATGATAAGAAACCAAAGTTGTGGGTACCATGTTTaGAATTCCGTTTTAGCTGAGTGCTTTGGACTATCA | + |
|
Preference number: 3 (lower is better) Translates to: WMIRNQSCGYHV*NSVLAECFGLS Trigger: TGATAGTCCAAAGCACTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTTTGGTTTCTTATCATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | AATTCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGGATGCTGGAGAGTGCTaGCAGTGGTACTTTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSVLAECFGLSRPSVAPWDAGEC*QWYFWG Trigger: GCCCCAAAAGTACCACTGTCAGCACTCTCCAGCATC...CCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | TTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAATTGGTCCTCTTCTGCGTaGCATTGCCTTCTGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAECFGLSRPSVAPWRKNWSSSA*HCLLLC Trigger: GCAGAGCAGAAGGCAATGCCACGCAGAAGAGGACCA...ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR CAA 72 bp | ACTAAGGTGTCCTTGGCCTCTTCAGTGGTGGTGGCCTaGAACTACACAGCACACTTGCACACTCAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKVSLASSVVVA*NYTAHLHTQLL Trigger: CAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGAGGCCAAGGACACCTTAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAATCTTTCCAGGTCAGCCTaGTTCTGGCACCTGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAECFGLSRPSVAPWRKNLSRSA*FWHLTL Trigger: CAAAGTCAGGTGCCAGAAGCAGGCTGACCTGGAAAG...ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTAGGTCAGCCTGCTTCTaGCACCTGACTTTGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGGGLELHSTLAHSASECRSACF*HLTLVL Trigger: GAGGACCAAAGTCAGGTGCCAGAAGCAGGCTGACCT...ACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTCCAGTATCACGTCCCTCAGTaGCTCCCTGGAGGAAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VVALNYTAHLHTQLLNVQYHVPQ*LPGGRM Trigger: CATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATA...CTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | TCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGTGCCTTTTATCTTGCTaGTCCAAGCGAGGACTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLAECFGLSRPSVAPWRCLLSC*SKRGLC Trigger: ACATAGTCCTCGCTTGGATCAGCAAGATAAAAGGCA...CCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | TCTGACCACACAGACACCTCCCAGCAGATGAATGCATCACCTCCTCATGATAATCAGTGGTGGTGGCCTTaGACTACACAGCACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDHTDTSQQMNASPPHDNQWWWP*TTQHTC Trigger: GCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTG...ATTATCATGAGGAGGTGATGCATTCATCTGCTGGGAGGTGTCTGTGTGGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | AATTCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGCCATCATCTTATCTaGCCACACAGACACCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSVLAECFGLSRPSVAPWSHHLI*PHRHLP Trigger: TGGGAGGTGTCTGTGTGGTCAGATAAGATGATGGCT...CCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | TCTGACCACACAGACACCTCCCAGCAGATGAATGCATCACCTCCTCATGATAATCGTGGCATTGCCTTCTaGTCTGCTGGATTCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SDHTDTSQQMNASPPHDNRGIAF*SAGFWR Trigger: ACGCCAGAATCCAGCAGAGCAGAAGGCAATGCCACG...ATTATCATGAGGAGGTGATGCATTCATCTGCTGGGAGGTGTCTGTGTGGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTCCAGTCTTCTGCGTGGCATTaGCTTCTGCTCTGCTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VVALNYTAHLHTQLLNVQSSAWH*LLLCWI Trigger: AATCCAGCAGAGCAGAAGGCAATGCCACGCAGAAGA...CTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | AATTCCGTTTTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGACTTTGGTCCTCTTCTaGGTGGCATTGCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSVLAECFGLSRPSVAPWTLVLF*VALPSA Trigger: AGCAGAAGGCAATGCCACGCAGAAGAGGACCAAAGT...CCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| 3UTR CAA 72 bp | TCTTCAGTGGTGGTGGCCTTGAACTACACAGCACACTaGCACACTCAGCTTCTGAATGTCCAGAGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVVVALNYTAH*HTQLLNVQSSP Trigger: AGGACTGCTCTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | TCTGACCACACAGACACCTCCCAGCAGATGAATGCATCACCTCCTCATGATAATCCTACAGGGCCAATTTaGAAGCACCTCTCCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDHTDTSQQMNASPPHDNPTGPI*KHLSLE Trigger: TTCCAGGGAGAGGTGCTTCCAAATTGGCCCTGTAGG...ATTATCATGAGGAGGTGATGCATTCATCTGCTGGGAGGTGTCTGTGTGGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTTCAGTGGTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTACTACAAACCCTATGTaGCTCATTCAACAGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASSVVVALNYTAHLHTQLTTNPM*LIQQVS Trigger: TGACACCTGTTGAATGAGGCACATAGGGTTTGTAGT...AAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCTGAGTGCTTTGGACTATCACGTCCCTCAGTGGCTCCCTGGAGGAAGAATTGTGGGTACCATGTTTaGAATTCCGTTTTAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAECFGLSRPSVAPWRKNCGYHV*NSVLAE Trigger: CTCAGCTAAAACGGAATTGCAAACATGGTACCCACA...ATTCTTCCTCCAGGGAGCCACTGAGGGACGTGATAGTCCAAAGCACTCAGCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAACTGAAGACTAAACCATGGAAATTGGGAACAAGCACTTACTCGCTTAGATGTGAGGCAGCTGGCTaGCATCAATCCTCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKLKTKPWKLGTSTYSLRCEAAG*HQSSPQ Trigger: CTGGGGAGAGGATTGATGCCAGCCAGCTGCCTCACA...TCTAAGCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAGTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | AATTTGGAAGCACCTCTCCCTGGAAGCCAGGTTAGAATTCCTACTAAGGTGTCCAGAAATGCAATTCTTTaGTGGTGCCAGACAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLEAPLPGSQVRIPTKVSRNAIL*WCQTAR Trigger: TCTGGCTGTCTGGCACCATCAAAGAATTGCATTTCT...GGACACCTTAGTAGGAATTCTAACCTGGCTTCCAGGGAGAGGTGCTTCCAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | GTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACACCTGCTTCTGGCACCTaGCTTTGGTCCTCTTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: VIILAYYLTTTRNTTVTTPASGT*LWSSSA Trigger: CGCAGAAGAGGACCAAAGTCAGGTGCCAGAAGCAGG...TGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTGAAGACTAAACCATGGAAATTGGGAACAAGCACTTACTCGCTTAGAACACCTCCCAGCAGATaGATGCATCACCTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LKLKTKPWKLGTSTYSLRTPPSR*MHHLLM Trigger: CATGAGGAGGTGATGCATTCATCTGCTGGGAGGTGT...TCTAAGCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAGTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAACTGAAGACTAAACCATGGAAATTGGGAACAAGCACTTACTCGCTTAGATGCTCTGCTGGATTCTaGCGTATGGCTCATCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLKTKPWKLGTSTYSLRCSAGF*RMAHQR Trigger: CCTCTGATGAGCCATACGCCAGAATCCAGCAGAGCA...TCTAAGCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAGTTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACAAACCCTCTACTAAGGTGTCCTTaGCCTCTTCAGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAYYLTTTRNTTVTTNPLLRCP*PLQWWW Trigger: CCACCACCACTGAAGAGGCCAAGGACACCTTAGTAG...AGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | AATTTGGAAGCACCTCTCCCTGGAAGCCAGGTTAGAATTCCTACTAAGGTGTCCCTAAACCATGGAAATTaGGAACAAGCACTTACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: NLEAPLPGSQVRIPTKVSLNHGN*EQALTR Trigger: GCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAG...GGACACCTTAGTAGGAATTCTAACCTGGCTTCCAGGGAGAGGTGCTTCCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTGCACACTCAGCTTCTaGATGTCCAGAGCAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESDNISLLPHNHKEHYSDCTLSF*MSRAVL Trigger: CAGGACTGCTCTGGACATTCAGAAGCTGAGTGTGCA...GTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | ATGATAAGAAACCAAAGTTGTGGGTACCATGTTTGCAATTCCGTTTTAGCTGAGCTGGATTCTGGCGTATaGCTCATCAGAGGAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: MIRNQSCGYHVCNSVLAELDSGV*LIRGGT Trigger: AGTGCCTCCTCTGATGAGCCATACGCCAGAATCCAG...CTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTTTGGTTTCTTATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTGCCTTCTGCTCTGCTaGATTCTGGCGTATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESDNISLLPHNHKEHYSDCLLLC*ILAYGS Trigger: TGAGCCATACGCCAGAATCCAGCAGAGCAGAAGGCA...GTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCCATCATCTTATCTGACCACACAGACACCTCCCAGCAGATGAATGCATCAAAGAAACCAAAGTTGTaGGTACCATGTTTGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VAIILSDHTDTSQQMNASKKPKL*VPCLQF Trigger: GAATTGCAAACATGGTACCCACAACTTTGGTTTCTT...TGATGCATTCATCTGCTGGGAGGTGTCTGTGTGGTCAGATAAGATGATGGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | ATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACAAACCCTGTCCTGAGTCTTGCCTaGGAAAAATACTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILAYYLTTTRNTTVTTNPVLSLA*EKYSGS Trigger: AGAACCTGAGTATTTTTCTCAGGCAAGACTCAGGAC...AGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | ATGATAAGAAACCAAAGTTGTGGGTACCATGTTTGCAATTCCGTTTTAGCTGAGCAAGGAACACTACAGTaGCTACAAACCCTATGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MIRNQSCGYHVCNSVLAEQGTLQ*LQTLCA Trigger: GGCACATAGGGTTTGTAGTCACTGTAGTGTTCCTTG...CTCAGCTAAAACGGAATTGCAAACATGGTACCCACAACTTTGGTTTCTTATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | ATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACAAACCCTAGCAGTCCTGAGTCTTaGCTGAGAAAAATACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILAYYLTTTRNTTVTTNPSSPES*LRKILR Trigger: CCTGAGTATTTTTCTCAGGCAAGACTCAGGACTGCT...AGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTCCGTTTTAGCTGAGTaGTTTGGACTATCACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESDNISLLPHNHKEHYSDSVLAE*FGLSRP Trigger: GGGACGTGATAGTCCAAAGCACTCAGCTAAAACGGA...GTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCACTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGTGATAATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACCAATTCCGTTTTAGCTaGGTGCTTTGGACTATCACG | + |
|
Preference number: 4 (lower is better) Translates to: ESDNISLLPHNHKEHYSDQFRFS*VLWTIT Trigger: CGTGATAGTCCAAAGCACTCAGCTAAAACGGAATTG...GTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATATTATCACTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTGAAGACTAAACCATGGAAATTGGGAACAAGCACTTACTCGCTTAGAGGAAGAATGATTGAATaGCAGGATAGGAATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LKLKTKPWKLGTSTYSLRGRMIE*QDRNGM Trigger: CATTCCATTCCTATCCTGTCATTCAATCATTCTTCC...TCTAAGCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAGTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CCA 90 bp | ATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACAAACCCTCCCATAAGCTCTTCTTaGGTCAGAAATGCAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILAYYLTTTRNTTVTTNPPISSS*VRNAIL Trigger: AAGAATTGCATTTCTGACCCAAGAAGAGCTTATGGG...AGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS TCA 90 bp | CCGAACAGGATGCTAATGGCATGGCCACGTGTTTCCAGCACCCTGTaGGGCAGCTGGCTGGCATCAATCCTCTCCCCAGCTTCCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PNRMLMAWPRVSSTL*GSWLASILSPASIP Trigger: TGGGATGGAAGCTGGGGAGAGGATTGATGCCAGCCAGCTGCCTCACAGGGTGCTGGAAACACGTGGCCATGCCATTAGCATCCTGTTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCTTCAGTGGTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTTCAGTGGTGGTGGCCTaGAACTACACAGCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSVVVALNYTAHLHTQLSVVVA*NYTAHL Trigger: CAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGA...AAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACTGAAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS CCA 90 bp | CTCTTCTGCGTGGCATTGCCTTCTGCTCTGCTGGATTCTGGCGTATaGCTCATCAGAGGAGGCACTAACATCAGGGCTGCCTTTTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFCVALPSALLDSGV*LIRGGTNIRAAFYL Trigger: AAGATAAAAGGCAGCCCTGATGTTAGTGCCTCCTCTGATGAGCCATACGCCAGAATCCAGCAGAGCAGAAGGCAATGCCACGCAGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000400419.2 ENST00000617002.1 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTCCAGCTGACAGTGGTACTTTaGGGGCCCCACTCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VVALNYTAHLHTQLLNVQLTVVL*GPHSSF Trigger: GAATGAAGAGTGGGGCCCCAAAAGTACCACTGTCAG...CTGGACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGTGGTGGCCTTGAACTACACAGCACACTTGCACACTCAGCTTCTGAATGTCCTACTAAGGTGTCCTaGGCCTCTTCAGTGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGGGLELHSTLAHSASECPTKVS*ASSVVV Trigger: CACCACCACTGAAGAGGCCAAGGACACCTTAGTAGG...ACATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTTCAAGGCCACCACCACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS GCA 90 bp | TCCATCCCACCCCCATCCACCCATAAGCTCTTCTTGGGTCAGAAATaGAATTCTTTGATGGTGCCAGACAGCCAGATGATGCTGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SIPPPSTHKLFLGQK*NSLMVPDSQMMLES Trigger: ACTCTCCAGCATCATCTGGCTGTCTGGCACCATCAAAGAATTGCATTTCTGACCCAAGAAGAGCTTATGGGTGGATGGGGGTGGGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCAATTTGGAAGCACCTCTCCCTGGAAGCCAGGTTAGAATTCCTACTAAGGGATAAGAAACCAAAGTaGTGGGTACCATGTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPIWKHLSLEARLEFLLRDKKPK*WVPCLQ Trigger: TTGCAAACATGGTACCCACAACTTTGGTTTCTTATC...CCTTAGTAGGAATTCTAACCTGGCTTCCAGGGAGAGGTGCTTCCAAATTGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CAA 90 bp | ATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACAAACCCTGGGCTGCCTTTTATCTaGCTGATCCAAGCGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: ILAYYLTTTRNTTVTTNPGLPFI*LIQART Trigger: AGTCCTCGCTTGGATCAGCAAGATAAAAGGCAGCCC...AGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAACTGAAGACTAAACCATGGAAATTGGGAACAAGCACTTACTCGCTTAGACAGAAATGCAATTCTTaGATGGTGCCAGACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKLKTKPWKLGTSTYSLRQKCNS*MVPDSQ Trigger: CTGGCTGTCTGGCACCATCAAAGAATTGCATTTCTG...TCTAAGCGAGTAAGTGCTTGTTCCCAATTTCCATGGTTTAGTCTTCAGTTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS-3UTR CAA 90 bp | ATATTAGCCTATTACCTCACAACCACAAGGAACACTACAGTGACTACAAACCCTAACTACACAGCACACTaGCACACTCAGCTTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILAYYLTTTRNTTVTTNPNYTAH*HTQLLN Trigger: ATTCAGAAGCTGAGTGTGCAAGTGTGCTGTGTAGTT...AGGGTTTGTAGTCACTGTAGTGTTCCTTGTGGTTGTGAGGTAATAGGCTAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS CCA 72 bp | GTGGCATTGCCTTCTGCTCTGCTGGATTCTGGCGTATaGCTCATCAGAGGAGGCACTAACATCAGGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VALPSALLDSGV*LIRGGTNIRAA Trigger: GGCAGCCCTGATGTTAGTGCCTCCTCTGATGAGCCATACGCCAGAATCCAGCAGAGCAGAAGGCAATGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000400419.2 ENST00000617002.1 |
||
| CDS CAA 72 bp | CACCTTTCCAGGTCAGCCTGCTTCTGGCACCTGACTTaGGTCCTCTTCTGCGTGGCATTGCCTTCTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLSRSACFWHLT*VLFCVALPSAL Trigger: CAGAGCAGAAGGCAATGCCACGCAGAAGAGGACCAAAGTCAGGTGCCAGAAGCAGGCTGACCTGGAAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||
| CDS GCA 72 bp | CTTTGGTCCTCTTCTGCGTGGCATTGCCTTCTGCTCTaGTGGATTCTGGCGTATGGCTCATCAGAGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LWSSSAWHCLLL*WILAYGSSEEA Trigger: TGCCTCCTCTGATGAGCCATACGCCAGAATCCAGCAGAGCAGAAGGCAATGCCACGCAGAAGAGGACCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000400419.2 ENST00000617002.1 |
||
| CDS CCA 72 bp | TGGTCCTCTTCTGCGTGGCATTGCCTTCTGCTCTGCTaGATTCTGGCGTATGGCTCATCAGAGGAGGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: WSSSAWHCLLLC*ILAYGSSEEAL Trigger: TAGTGCCTCCTCTGATGAGCCATACGCCAGAATCCAGCAGAGCAGAAGGCAATGCCACGCAGAAGAGGACCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000400419.2 ENST00000617002.1 |
||
| CDS CAA 72 bp | ACCCATAAGCTCTTCTTGGGTCAGAAATGCAATTCTTaGATGGTGCCAGACAGCCAGATGATGCTGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: THKLFLGQKCNS*MVPDSQMMLES Trigger: ACTCTCCAGCATCATCTGGCTGTCTGGCACCATCAAAGAATTGCATTTCTGACCCAAGAAGAGCTTATGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000400419.2 |
||