Pregenerated sensors for SMIM15 (Homo sapiens)
Ensembl gene IDs: ENSG00000188725Ensembl transcript IDs: ENST00000339020.8, ENST00000507416.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCGCGGGCCCCTTGTCGCGCAGAGCGGAGGGTCCTGGGAGATCCTaGGTTGGCCCAGCCACACCTTGCGCCGCCGCCGTTTCTGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGPLSRRAEGPGRS*VGPATPCAAAVSAP Trigger: TGGCGCAGAAACGGCGGCGGCGCAAGGTGTGGCTGGGCCAACCCAGGATCTCCCAGGACCCTCCGCTCTGCGCGACAAGGGGCCCGCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507416.1 |
||
| CDS CCA 90 bp | AGCGCGGGCCCCTTGTCGCGCAGAGCGGAGGGTCCTGGGAGATCCTaGGTTGGCCCAGCCACACCTTGCGCCGCCGCCGTTTCTGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAGPLSRRAEGPGRS*VGPATPCAAAVSAG Trigger: TCCAGCAGAAACGGCGGCGGCGCAAGGTGTGGCTGGGCCAACCCAGGATCTCCCAGGACCCTCCGCTCTGCGCGACAAGGGGCCCGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339020.8 |
||
| CDS CCA 90 bp | ATCCTGGGTTGGCCCAGCCACACCTTGCGCCGCCGCCGTTTCTGCTaGACACCAGGAGAAAACCACGGCAGCTGCAGCCACCAACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGWPSHTLRRRRFC*TPGENHGSCSHQLP Trigger: GGGAAGTTGGTGGCTGCAGCTGCCGTGGTTTTCTCCTGGTGTCCAGCAGAAACGGCGGCGGCGCAAGGTGTGGCTGGGCCAACCCAGGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339020.8 |
||
| CDS GCA 90 bp | GAGATCCTGGGTTGGCCCAGCCACACCTTGCGCCGCCGCCGTTTCTaGTGGACACCAGGAGAAAACCACGGCAGCTGCAGCCACCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: EILGWPSHTLRRRRF*WTPGENHGSCSHQL Trigger: AAGTTGGTGGCTGCAGCTGCCGTGGTTTTCTCCTGGTGTCCAGCAGAAACGGCGGCGGCGCAAGGTGTGGCTGGGCCAACCCAGGATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339020.8 |
||