Pregenerated sensors for SMIM11B (Homo sapiens)

Ensembl gene IDs: ENSG00000273590

Ensembl transcript IDs: ENST00000612624.4, ENST00000622934.3, ENST00000623661.1, ENST00000624534.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	GCCAGGCAGAAGCAATTGGGTGAAACTCCCAGGAGATaGCTGGATGGGTCCAGGTTGAGTCTGCTGTTCCGG	+
Preference number: 3 (lower is better) Translates to: ARQKQLGETPRR*LDGSRLSLLFR Trigger: CCGGAACAGCAGACTCAACCTGGACCCATCCAGGCATCTCCTGGGAGTTTCACCCAATTGCTTCTGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623661.1
3UTR CAA 72 bp	AAGGGTGTGGCTGACAGGGAGACTCTAGGACTACCATaGCCACTTCCACCAGAGCAGCCACACTTCTGTTCC	+
Preference number: 4 (lower is better) Translates to: KGVADRETLGLP*PLPPEQPHFCS Trigger: GGAACAGAAGTGTGGCTGCTCTGGTGGAAGTGGCAATGGTAGTCCTAGAGTCTCCCTGTCAGCCACACCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612624.4 ENST00000622934.3
CDS CCA 72 bp	TTTGAAGTTAGTGAATGCACACTCGAAGAAAAGGCCTaGCCTTCTTCCAGAAGTCCAGCGAATAAATGTACA	+
Preference number: 6 (lower is better) Translates to: FEVSECTLEEKA*PSSRSPANKCT Trigger: TGTACATTTATTCGCTGGACTTCTGGAAGAAGGCCAGGCCTTTTCTTCGAGTGTGCATTCACTAACTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624534.1

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